Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433300 | GAU11476.1 | 87.461 | 319 | 39 | 1 | 1 | 319 | 1 | 318 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433300 | sp|I6YGS0|EPHA_MYCTU | 36.308 | 325 | 189 | 6 | 1 | 316 | 1 | 316 | 5.62e-62 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433300 | A2Q320 | 84.639 | 319 | 49 | 0 | 1 | 319 | 1 | 319 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621940 | Msa1433300 | 0.998997 | 2.761544e-285 | -8.615850e-47 |
| Msa0622010 | Msa1433300 | 0.994948 | 1.247653e-211 | -8.615850e-47 |
| Msa1305040 | Msa1433300 | 0.998092 | 5.865898e-256 | -8.615850e-47 |
| Msa1039480 | Msa1433300 | 0.894502 | 2.322821e-75 | -8.615850e-47 |
| Msa1085590 | Msa1433300 | 0.871315 | 7.505022e-67 | -8.615850e-47 |
| Msa0575990 | Msa1433300 | 0.836233 | 1.055227e-56 | -8.615850e-47 |
| Msa0576100 | Msa1433300 | 0.831725 | 1.418269e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433300 | MtrunA17_Chr7g0272481 | 84.639 | 319 | 49 | 0 | 1 | 319 | 1 | 319 | 0.0 | 568 |
| Msa1433300 | MtrunA17_Chr7g0272531 | 82.759 | 319 | 55 | 0 | 1 | 319 | 31 | 349 | 0.0 | 567 |
| Msa1433300 | MtrunA17_Chr7g0272501 | 82.445 | 319 | 56 | 0 | 1 | 319 | 1 | 319 | 0.0 | 563 |
| Msa1433300 | MtrunA17_Chr7g0272181 | 81.818 | 319 | 58 | 0 | 1 | 319 | 1 | 319 | 0.0 | 559 |
| Msa1433300 | MtrunA17_Chr7g0272171 | 81.191 | 319 | 60 | 0 | 1 | 319 | 1 | 319 | 0.0 | 553 |
| Msa1433300 | MtrunA17_Chr7g0272431 | 72.897 | 321 | 83 | 2 | 1 | 319 | 1 | 319 | 4.28e-179 | 497 |
| Msa1433300 | MtrunA17_Chr7g0272441 | 73.832 | 321 | 80 | 2 | 1 | 319 | 1 | 319 | 1.85e-177 | 493 |
| Msa1433300 | MtrunA17_Chr4g0000111 | 71.207 | 323 | 88 | 3 | 1 | 319 | 1 | 322 | 7.57e-175 | 487 |
| Msa1433300 | MtrunA17_Chr7g0272451 | 71.160 | 319 | 89 | 2 | 1 | 319 | 1 | 316 | 2.56e-174 | 485 |
| Msa1433300 | MtrunA17_Chr4g0067581 | 61.059 | 321 | 121 | 3 | 1 | 319 | 37 | 355 | 1.94e-142 | 406 |
| Msa1433300 | MtrunA17_Chr7g0269471 | 56.740 | 319 | 136 | 2 | 1 | 319 | 1 | 317 | 3.02e-134 | 384 |
| Msa1433300 | MtrunA17_Chr8g0372491 | 46.708 | 319 | 166 | 3 | 1 | 319 | 3 | 317 | 1.24e-103 | 306 |
| Msa1433300 | MtrunA17_Chr7g0272471 | 82.051 | 156 | 28 | 0 | 1 | 156 | 1 | 156 | 9.05e-96 | 280 |
| Msa1433300 | MtrunA17_Chr1g0192291 | 73.585 | 159 | 38 | 2 | 1 | 156 | 1 | 158 | 3.10e-83 | 249 |
| Msa1433300 | MtrunA17_Chr2g0324141 | 37.383 | 321 | 187 | 7 | 1 | 318 | 1 | 310 | 1.14e-66 | 211 |
| Msa1433300 | MtrunA17_Chr2g0324161 | 36.760 | 321 | 189 | 7 | 1 | 318 | 1 | 310 | 3.80e-64 | 205 |
| Msa1433300 | MtrunA17_Chr4g0047701 | 36.137 | 321 | 190 | 6 | 1 | 318 | 1 | 309 | 6.95e-62 | 199 |
| Msa1433300 | MtrunA17_Chr4g0047681 | 34.579 | 321 | 195 | 6 | 1 | 318 | 1 | 309 | 2.08e-59 | 192 |
| Msa1433300 | MtrunA17_Chr7g0272391 | 69.231 | 117 | 14 | 2 | 161 | 276 | 1 | 96 | 2.65e-45 | 150 |
| Msa1433300 | MtrunA17_Chr7g0272461 | 59.813 | 107 | 39 | 2 | 177 | 281 | 1 | 105 | 1.22e-36 | 128 |
| Msa1433300 | MtrunA17_Chr3g0086531 | 72.603 | 73 | 20 | 0 | 80 | 152 | 1 | 73 | 1.58e-33 | 119 |
| Msa1433300 | MtrunA17_Chr7g0272511 | 76.316 | 38 | 9 | 0 | 278 | 315 | 29 | 66 | 8.87e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433300 | AT3G05600.1 | 61.111 | 324 | 121 | 4 | 1 | 319 | 1 | 324 | 5.20e-149 | 422 |
| Msa1433300 | AT4G02340.1 | 56.386 | 321 | 133 | 4 | 1 | 319 | 1 | 316 | 3.32e-134 | 384 |
| Msa1433300 | AT4G15960.1 | 54.154 | 325 | 142 | 3 | 1 | 319 | 51 | 374 | 1.37e-125 | 364 |
| Msa1433300 | AT2G26740.1 | 59.317 | 322 | 124 | 4 | 4 | 319 | 1 | 321 | 8.38e-125 | 360 |
| Msa1433300 | AT2G26750.1 | 57.632 | 321 | 130 | 4 | 4 | 319 | 1 | 320 | 1.32e-119 | 347 |
| Msa1433300 | AT3G05600.2 | 61.728 | 243 | 88 | 4 | 1 | 238 | 1 | 243 | 3.92e-109 | 317 |
| Msa1433300 | AT4G15955.3 | 51.077 | 325 | 123 | 5 | 5 | 319 | 6 | 304 | 7.53e-106 | 311 |
| Msa1433300 | AT3G51000.1 | 44.954 | 327 | 159 | 6 | 3 | 319 | 4 | 319 | 1.33e-97 | 291 |
| Msa1433300 | AT4G15955.2 | 57.471 | 174 | 64 | 2 | 5 | 168 | 6 | 179 | 1.34e-67 | 209 |
| Msa1433300 | AT4G15955.1 | 57.576 | 165 | 60 | 2 | 5 | 159 | 6 | 170 | 1.51e-63 | 199 |
Find 96 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTAGGCTTTGACTCTTTC+AGG | 0.145162 | tig0027254:-7964 | None:intergenic |
| CTACTATATCTGCAGATTTC+AGG | 0.187669 | tig0027254:+8065 | Msa1433300:CDS |
| CATGATTGGGGTGCCTTAAT+TGG | 0.213822 | tig0027254:+7919 | Msa1433300:CDS |
| CCAGTAGTCTTGTTCCTTCA+TGG | 0.244564 | tig0027254:+7694 | Msa1433300:CDS |
| TCTTTCTTGTTGCTCATGAT+TGG | 0.261993 | tig0027254:+7905 | Msa1433300:CDS |
| GAGGAAGTGATTGTACAAAA+AGG | 0.277197 | tig0027254:+8700 | Msa1433300:CDS |
| GTCATAGGAACCAGGTAAAA+TGG | 0.282976 | tig0027254:+8209 | Msa1433300:intron |
| CTTTCTTGTTGCTCATGATT+GGG | 0.285427 | tig0027254:+7906 | Msa1433300:CDS |
| AAAATGCATCTTGCAGAAAA+AGG | 0.286834 | tig0027254:+7661 | Msa1433300:CDS |
| ATAGATTATACCATCTTATA+TGG | 0.288780 | tig0027254:+8956 | Msa1433300:three_prime_UTR |
| TTAACATCTTTGTCACGTTT+AGG | 0.290784 | tig0027254:-8806 | None:intergenic |
| AGCCAAGAGGGCAAGGTGTC+AGG | 0.303963 | tig0027254:-8351 | None:intergenic |
| CCCCTGACACCTTGCCCTCT+TGG | 0.306808 | tig0027254:+8349 | Msa1433300:CDS |
| CGCCATGAGTACCAGAGTTC+GGG | 0.318900 | tig0027254:-7721 | None:intergenic |
| TAACATCTTTGTCACGTTTA+GGG | 0.321271 | tig0027254:-8805 | None:intergenic |
| ACAAAGATACCAACCAATTA+AGG | 0.323697 | tig0027254:-7932 | None:intergenic |
| GTCTCTAAATTTGACAAAAC+AGG | 0.325042 | tig0027254:+8399 | Msa1433300:CDS |
| ATCCTCACAACACGGAAAAT+TGG | 0.340437 | tig0027254:+8276 | Msa1433300:CDS |
| GGCAAGGTGTCAGGGGTATC+CGG | 0.344243 | tig0027254:-8342 | None:intergenic |
| TACGTAGAAACCCAAATAAA+AGG | 0.378449 | tig0027254:+8007 | Msa1433300:CDS |
| GCTCCCGATCTCCGTGGCTT+TGG | 0.388680 | tig0027254:+7787 | Msa1433300:CDS |
| GTGCCAGTGAAATTCATTAC+AGG | 0.390811 | tig0027254:+8595 | Msa1433300:CDS |
| TTTGACAAAACAGGCTTCAC+TGG | 0.391236 | tig0027254:+8408 | Msa1433300:CDS |
| AGGGCACCGATTAGAACTTC+AGG | 0.393206 | tig0027254:-8786 | None:intergenic |
| ACAATCACTTCCTCTAAATT+CGG | 0.394533 | tig0027254:-8691 | None:intergenic |
| CTTCTTTGTTTGCAGACTCT+GGG | 0.399025 | tig0027254:+8537 | Msa1433300:intron |
| TACACAATCTTCCACTTAGT+TGG | 0.410078 | tig0027254:+7841 | Msa1433300:CDS |
| GCGCCATGAGTACCAGAGTT+CGG | 0.415510 | tig0027254:-7722 | None:intergenic |
| CTGCTTCTTGATTATTAAAG+TGG | 0.416796 | tig0027254:-8729 | None:intergenic |
| GAATCCAGTTCCGTACTTGC+CGG | 0.427409 | tig0027254:-8316 | None:intergenic |
| ACTTAAAATCATCAAGGTCT+TGG | 0.445786 | tig0027254:-8929 | None:intergenic |
| GTCTCCAAAGCCACGGAGAT+CGG | 0.447397 | tig0027254:-7791 | None:intergenic |
| CATTACAGGTGAGCTAGATA+TGG | 0.453391 | tig0027254:+8609 | Msa1433300:CDS |
| TCTCCAAAGCCACGGAGATC+GGG | 0.455811 | tig0027254:-7790 | None:intergenic |
| GGAAGATGTGCCGAATTTAG+AGG | 0.457691 | tig0027254:+8681 | Msa1433300:CDS |
| GGGAACTGAGGGCCACAATC+TGG | 0.459581 | tig0027254:-7747 | None:intergenic |
| TACTTGCCGGTGGGAAGTAT+TGG | 0.475789 | tig0027254:-8303 | None:intergenic |
| CCCACCGGCAAGTACGGAAC+TGG | 0.478584 | tig0027254:+8312 | Msa1433300:CDS |
| GCCAAGAGGGCAAGGTGTCA+GGG | 0.488708 | tig0027254:-8350 | None:intergenic |
| GATCACTTGCGTGATGTGTA+TGG | 0.490923 | tig0027254:+8036 | Msa1433300:CDS |
| TTCATGGCTTCCCCGAACTC+TGG | 0.493938 | tig0027254:+7710 | Msa1433300:CDS |
| GCAAGGTGTCAGGGGTATCC+GGG | 0.499424 | tig0027254:-8341 | None:intergenic |
| ATTCATCCTGAAGTTCTAAT+CGG | 0.501509 | tig0027254:+8780 | Msa1433300:exon |
| TTTCTTGTTGCTCATGATTG+GGG | 0.508757 | tig0027254:+7907 | Msa1433300:CDS |
| ATTTGGGTTTCTACGTAGGA+AGG | 0.512776 | tig0027254:-8001 | None:intergenic |
| TCCCCGAACTCTGGTACTCA+TGG | 0.513767 | tig0027254:+7719 | Msa1433300:CDS |
| TATACATGGAGGAGGAATGA+AGG | 0.514026 | tig0027254:+8660 | Msa1433300:CDS |
| CACAGAACAGTGGAAGTGAA+TGG | 0.515742 | tig0027254:+7634 | Msa1433300:CDS |
| GCCACGGAGATCGGGAGCTA+CGG | 0.522060 | tig0027254:-7782 | None:intergenic |
| ATTGGGGTGCCTTAATTGGT+TGG | 0.526960 | tig0027254:+7923 | Msa1433300:CDS |
| ATACTTCCCACCGGCAAGTA+CGG | 0.526961 | tig0027254:+8306 | Msa1433300:CDS |
| TTCTGTAAGCCAAGAGGGCA+AGG | 0.536914 | tig0027254:-8358 | None:intergenic |
| CTCATGGCGCCACCAGATTG+TGG | 0.538156 | tig0027254:+7735 | Msa1433300:CDS |
| CAACGATATCACCAACTAAG+TGG | 0.540284 | tig0027254:-7852 | None:intergenic |
| GAGCTACGGCGTGGTAGCCG+AGG | 0.552775 | tig0027254:-7768 | None:intergenic |
| TTGCCGGTGGGAAGTATTGG+AGG | 0.553767 | tig0027254:-8300 | None:intergenic |
| ATGCAAACTTAAAATCATCA+AGG | 0.555240 | tig0027254:-8935 | None:intergenic |
| GTGTAGTTGCTTATTGAAGT+GGG | 0.557721 | tig0027254:-7823 | None:intergenic |
| ACTAGTACAACCATATAAGA+TGG | 0.557805 | tig0027254:-8966 | None:intergenic |
| TCACCTGTAATGAATTTCAC+TGG | 0.565006 | tig0027254:-8598 | None:intergenic |
| AGAGTTCGGGGAAGCCATGA+AGG | 0.565421 | tig0027254:-7708 | None:intergenic |
| TCTGGGAGCTCACAACTCCA+TGG | 0.565482 | tig0027254:+8554 | Msa1433300:CDS |
| TCCAGTTCCGTACTTGCCGG+TGG | 0.566439 | tig0027254:-8313 | None:intergenic |
| CCATGAAGGAACAAGACTAC+TGG | 0.567142 | tig0027254:-7694 | None:intergenic |
| TGATCCATGTCATAGGAACC+AGG | 0.570861 | tig0027254:+8201 | Msa1433300:intron |
| TTTGGGTTTCTACGTAGGAA+GGG | 0.576884 | tig0027254:-8000 | None:intergenic |
| TCGTCTTCTGTAAGCCAAGA+GGG | 0.589343 | tig0027254:-8363 | None:intergenic |
| GAAGCTGAGATTGCTGAAGT+TGG | 0.590696 | tig0027254:+8231 | Msa1433300:CDS |
| GGCATGAAGGAGTATATACA+TGG | 0.590893 | tig0027254:+8646 | Msa1433300:CDS |
| TGTGTAGTTGCTTATTGAAG+TGG | 0.591667 | tig0027254:-7824 | None:intergenic |
| GAGCTCACAACTCCATGGAC+CGG | 0.592214 | tig0027254:+8559 | Msa1433300:CDS |
| AAGGAGTATATACATGGAGG+AGG | 0.594079 | tig0027254:+8652 | Msa1433300:CDS |
| GACAAAACAGGCTTCACTGG+AGG | 0.595419 | tig0027254:+8411 | Msa1433300:CDS |
| AGCTACGGCGTGGTAGCCGA+GGG | 0.595559 | tig0027254:-7767 | None:intergenic |
| GATATGGTGTACACTTCGCT+AGG | 0.598016 | tig0027254:+8625 | Msa1433300:CDS |
| ATTTAGAGACAAAGTAAGCA+AGG | 0.606314 | tig0027254:-8386 | None:intergenic |
| CGTGGTAGCCGAGGGAACTG+AGG | 0.611603 | tig0027254:-7759 | None:intergenic |
| GTGGTAGCCGAGGGAACTGA+GGG | 0.612520 | tig0027254:-7758 | None:intergenic |
| ATTGTGGCCCTCAGTTCCCT+CGG | 0.614475 | tig0027254:+7751 | Msa1433300:CDS |
| AACTGAGGGCCACAATCTGG+TGG | 0.616466 | tig0027254:-7744 | None:intergenic |
| CCAGTTCCGTACTTGCCGGT+GGG | 0.621230 | tig0027254:-8312 | None:intergenic |
| GTACACTTCGCTAGGCATGA+AGG | 0.627184 | tig0027254:+8633 | Msa1433300:CDS |
| CCAAGAGGGCAAGGTGTCAG+GGG | 0.630193 | tig0027254:-8349 | None:intergenic |
| CATCACTGTCTCCAAAGCCA+CGG | 0.638680 | tig0027254:-7798 | None:intergenic |
| ATGGACCGGAGTGAAAACCT+TGG | 0.641351 | tig0027254:+8573 | Msa1433300:CDS |
| GGTCCTCCAATACTTCCCAC+CGG | 0.646331 | tig0027254:+8297 | Msa1433300:CDS |
| GTTGCTCTCATAGACTCACT+TGG | 0.649822 | tig0027254:+7871 | Msa1433300:CDS |
| AATGAATTTCACTGGCACCA+AGG | 0.651882 | tig0027254:-8590 | None:intergenic |
| GTCGTCTTCTGTAAGCCAAG+AGG | 0.663533 | tig0027254:-8364 | None:intergenic |
| GGAGATCGGGAGCTACGGCG+TGG | 0.695350 | tig0027254:-7777 | None:intergenic |
| GCCATGAGTACCAGAGTTCG+GGG | 0.700987 | tig0027254:-7720 | None:intergenic |
| GTACGGAACTGGATTCAACC+CGG | 0.702183 | tig0027254:+8323 | Msa1433300:CDS |
| AGGCATAGAACACAGAACAG+TGG | 0.709768 | tig0027254:+7624 | Msa1433300:CDS |
| GCCGTAGCTCCCGATCTCCG+TGG | 0.712868 | tig0027254:+7781 | Msa1433300:CDS |
| GGGACTACTAAGACAAACGT+AGG | 0.722492 | tig0027254:-7980 | None:intergenic |
| ATGAAGGAGTATATACATGG+AGG | 0.728089 | tig0027254:+8649 | Msa1433300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTACTTTAATGAATGAT+TGG | + | tig0027254:8160-8179 | Msa1433300:intron | 15.0% |
| !!! | GATAATCAAATTTTCATTTA+GGG | + | tig0027254:8489-8508 | Msa1433300:intron | 15.0% |
| !!! | ATTTTACTTTAATGAATGAT+TGG | + | tig0027254:8160-8179 | Msa1433300:intron | 15.0% |
| !!! | GATAATCAAATTTTCATTTA+GGG | + | tig0027254:8489-8508 | Msa1433300:intron | 15.0% |
| !!! | TTTGAAATATGATCATATAG+AGG | - | tig0027254:8107-8126 | None:intergenic | 20.0% |
| !!! | GGATAATCAAATTTTCATTT+AGG | + | tig0027254:8488-8507 | Msa1433300:intron | 20.0% |
| !! | ATAGATTATACCATCTTATA+TGG | + | tig0027254:8956-8975 | Msa1433300:three_prime_UTR | 20.0% |
| !!! | TTTGAAATATGATCATATAG+AGG | - | tig0027254:8107-8126 | None:intergenic | 20.0% |
| !!! | GGATAATCAAATTTTCATTT+AGG | + | tig0027254:8488-8507 | Msa1433300:intron | 20.0% |
| !! | ATAGATTATACCATCTTATA+TGG | + | tig0027254:8956-8975 | Msa1433300:three_prime_UTR | 20.0% |
| !!! | TCCATCTCTTTTTTTTCTTA+CGG | - | tig0027254:7604-7623 | None:intergenic | 25.0% |
| ! | TAAGAAAAAAAAGAGATGGA+AGG | + | tig0027254:7604-7623 | Msa1433300:exon | 25.0% |
| !!! | GATCTATGATCCTTTTATTT+GGG | - | tig0027254:8020-8039 | None:intergenic | 25.0% |
| !! | TGATCTATGATCCTTTTATT+TGG | - | tig0027254:8021-8040 | None:intergenic | 25.0% |
| ! | ATGAAAATTTGATTATCCCA+AGG | - | tig0027254:8486-8505 | None:intergenic | 25.0% |
| ! | ATGCAAACTTAAAATCATCA+AGG | - | tig0027254:8938-8957 | None:intergenic | 25.0% |
| !!! | TCCATCTCTTTTTTTTCTTA+CGG | - | tig0027254:7604-7623 | None:intergenic | 25.0% |
| ! | TAAGAAAAAAAAGAGATGGA+AGG | + | tig0027254:7604-7623 | Msa1433300:exon | 25.0% |
| !!! | GATCTATGATCCTTTTATTT+GGG | - | tig0027254:8020-8039 | None:intergenic | 25.0% |
| !! | TGATCTATGATCCTTTTATT+TGG | - | tig0027254:8021-8040 | None:intergenic | 25.0% |
| ! | ATGAAAATTTGATTATCCCA+AGG | - | tig0027254:8486-8505 | None:intergenic | 25.0% |
| ! | ATGCAAACTTAAAATCATCA+AGG | - | tig0027254:8938-8957 | None:intergenic | 25.0% |
| TCCGTAAGAAAAAAAAGAGA+TGG | + | tig0027254:7600-7619 | Msa1433300:exon | 30.0% | |
| AAAATGCATCTTGCAGAAAA+AGG | + | tig0027254:7661-7680 | Msa1433300:CDS | 30.0% | |
| ACAAAGATACCAACCAATTA+AGG | - | tig0027254:7935-7954 | None:intergenic | 30.0% | |
| !! | TTTTATTTGGGTTTCTACGT+AGG | - | tig0027254:8008-8027 | None:intergenic | 30.0% |
| TACGTAGAAACCCAAATAAA+AGG | + | tig0027254:8007-8026 | Msa1433300:CDS | 30.0% | |
| AAATATGATCATATAGAGGC+TGG | - | tig0027254:8103-8122 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGATCCATGTCAT+AGG | + | tig0027254:8194-8213 | Msa1433300:intron | 30.0% |
| !! | GATATTTTTCAGCACATAAG+CGG | - | tig0027254:8259-8278 | None:intergenic | 30.0% |
| TGAAAAATATCCTCACAACA+CGG | + | tig0027254:8268-8287 | Msa1433300:CDS | 30.0% | |
| ATTTAGAGACAAAGTAAGCA+AGG | - | tig0027254:8389-8408 | None:intergenic | 30.0% | |
| GTCTCTAAATTTGACAAAAC+AGG | + | tig0027254:8399-8418 | Msa1433300:CDS | 30.0% | |
| ACAATCACTTCCTCTAAATT+CGG | - | tig0027254:8694-8713 | None:intergenic | 30.0% | |
| CTGCTTCTTGATTATTAAAG+TGG | - | tig0027254:8732-8751 | None:intergenic | 30.0% | |
| ! | ATTCATCCTGAAGTTCTAAT+CGG | + | tig0027254:8780-8799 | Msa1433300:exon | 30.0% |
| TAACATCTTTGTCACGTTTA+GGG | - | tig0027254:8808-8827 | None:intergenic | 30.0% | |
| TTAACATCTTTGTCACGTTT+AGG | - | tig0027254:8809-8828 | None:intergenic | 30.0% | |
| ACTTAAAATCATCAAGGTCT+TGG | - | tig0027254:8932-8951 | None:intergenic | 30.0% | |
| ACTAGTACAACCATATAAGA+TGG | - | tig0027254:8969-8988 | None:intergenic | 30.0% | |
| TCCGTAAGAAAAAAAAGAGA+TGG | + | tig0027254:7600-7619 | Msa1433300:exon | 30.0% | |
| AAAATGCATCTTGCAGAAAA+AGG | + | tig0027254:7661-7680 | Msa1433300:CDS | 30.0% | |
| ACAAAGATACCAACCAATTA+AGG | - | tig0027254:7935-7954 | None:intergenic | 30.0% | |
| !! | TTTTATTTGGGTTTCTACGT+AGG | - | tig0027254:8008-8027 | None:intergenic | 30.0% |
| TACGTAGAAACCCAAATAAA+AGG | + | tig0027254:8007-8026 | Msa1433300:CDS | 30.0% | |
| AAATATGATCATATAGAGGC+TGG | - | tig0027254:8103-8122 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGATCCATGTCAT+AGG | + | tig0027254:8194-8213 | Msa1433300:intron | 30.0% |
| !! | GATATTTTTCAGCACATAAG+CGG | - | tig0027254:8259-8278 | None:intergenic | 30.0% |
| TGAAAAATATCCTCACAACA+CGG | + | tig0027254:8268-8287 | Msa1433300:CDS | 30.0% | |
| ATTTAGAGACAAAGTAAGCA+AGG | - | tig0027254:8389-8408 | None:intergenic | 30.0% | |
| GTCTCTAAATTTGACAAAAC+AGG | + | tig0027254:8399-8418 | Msa1433300:CDS | 30.0% | |
| ACAATCACTTCCTCTAAATT+CGG | - | tig0027254:8694-8713 | None:intergenic | 30.0% | |
| CTGCTTCTTGATTATTAAAG+TGG | - | tig0027254:8732-8751 | None:intergenic | 30.0% | |
| ! | ATTCATCCTGAAGTTCTAAT+CGG | + | tig0027254:8780-8799 | Msa1433300:exon | 30.0% |
| TAACATCTTTGTCACGTTTA+GGG | - | tig0027254:8808-8827 | None:intergenic | 30.0% | |
| TTAACATCTTTGTCACGTTT+AGG | - | tig0027254:8809-8828 | None:intergenic | 30.0% | |
| ACTTAAAATCATCAAGGTCT+TGG | - | tig0027254:8932-8951 | None:intergenic | 30.0% | |
| ACTAGTACAACCATATAAGA+TGG | - | tig0027254:8969-8988 | None:intergenic | 30.0% | |
| TCTTGCAGAAAAAGGAAAAG+AGG | + | tig0027254:7669-7688 | Msa1433300:CDS | 35.0% | |
| CTTGCAGAAAAAGGAAAAGA+GGG | + | tig0027254:7670-7689 | Msa1433300:CDS | 35.0% | |
| GTGTAGTTGCTTATTGAAGT+GGG | - | tig0027254:7826-7845 | None:intergenic | 35.0% | |
| TGTGTAGTTGCTTATTGAAG+TGG | - | tig0027254:7827-7846 | None:intergenic | 35.0% | |
| TACACAATCTTCCACTTAGT+TGG | + | tig0027254:7841-7860 | Msa1433300:CDS | 35.0% | |
| TCTTTCTTGTTGCTCATGAT+TGG | + | tig0027254:7905-7924 | Msa1433300:CDS | 35.0% | |
| CTTTCTTGTTGCTCATGATT+GGG | + | tig0027254:7906-7925 | Msa1433300:CDS | 35.0% | |
| TTTCTTGTTGCTCATGATTG+GGG | + | tig0027254:7907-7926 | Msa1433300:CDS | 35.0% | |
| CTACTATATCTGCAGATTTC+AGG | + | tig0027254:8065-8084 | Msa1433300:CDS | 35.0% | |
| TCACCTGTAATGAATTTCAC+TGG | - | tig0027254:8601-8620 | None:intergenic | 35.0% | |
| ! | ATGAAGGAGTATATACATGG+AGG | + | tig0027254:8649-8668 | Msa1433300:CDS | 35.0% |
| GAGGAAGTGATTGTACAAAA+AGG | + | tig0027254:8700-8719 | Msa1433300:CDS | 35.0% | |
| AGTGATTGTACAAAAAGGAG+TGG | + | tig0027254:8705-8724 | Msa1433300:CDS | 35.0% | |
| GTGATTGTACAAAAAGGAGT+GGG | + | tig0027254:8706-8725 | Msa1433300:CDS | 35.0% | |
| TCTTGCAGAAAAAGGAAAAG+AGG | + | tig0027254:7669-7688 | Msa1433300:CDS | 35.0% | |
| CTTGCAGAAAAAGGAAAAGA+GGG | + | tig0027254:7670-7689 | Msa1433300:CDS | 35.0% | |
| GTGTAGTTGCTTATTGAAGT+GGG | - | tig0027254:7826-7845 | None:intergenic | 35.0% | |
| TGTGTAGTTGCTTATTGAAG+TGG | - | tig0027254:7827-7846 | None:intergenic | 35.0% | |
| TACACAATCTTCCACTTAGT+TGG | + | tig0027254:7841-7860 | Msa1433300:CDS | 35.0% | |
| TCTTTCTTGTTGCTCATGAT+TGG | + | tig0027254:7905-7924 | Msa1433300:CDS | 35.0% | |
| CTTTCTTGTTGCTCATGATT+GGG | + | tig0027254:7906-7925 | Msa1433300:CDS | 35.0% | |
| TTTCTTGTTGCTCATGATTG+GGG | + | tig0027254:7907-7926 | Msa1433300:CDS | 35.0% | |
| CTACTATATCTGCAGATTTC+AGG | + | tig0027254:8065-8084 | Msa1433300:CDS | 35.0% | |
| TCACCTGTAATGAATTTCAC+TGG | - | tig0027254:8601-8620 | None:intergenic | 35.0% | |
| ! | ATGAAGGAGTATATACATGG+AGG | + | tig0027254:8649-8668 | Msa1433300:CDS | 35.0% |
| GAGGAAGTGATTGTACAAAA+AGG | + | tig0027254:8700-8719 | Msa1433300:CDS | 35.0% | |
| AGTGATTGTACAAAAAGGAG+TGG | + | tig0027254:8705-8724 | Msa1433300:CDS | 35.0% | |
| GTGATTGTACAAAAAGGAGT+GGG | + | tig0027254:8706-8725 | Msa1433300:CDS | 35.0% | |
| CAACGATATCACCAACTAAG+TGG | - | tig0027254:7855-7874 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTCTACGTAGGAA+GGG | - | tig0027254:8003-8022 | None:intergenic | 40.0% |
| ! | ATTTGGGTTTCTACGTAGGA+AGG | - | tig0027254:8004-8023 | None:intergenic | 40.0% |
| TTTACCTGGTTCCTATGACA+TGG | - | tig0027254:8208-8227 | None:intergenic | 40.0% | |
| GTCATAGGAACCAGGTAAAA+TGG | + | tig0027254:8209-8228 | Msa1433300:intron | 40.0% | |
| ! | ATCTCAGCTTCCATTTTACC+TGG | - | tig0027254:8222-8241 | None:intergenic | 40.0% |
| ATCCTCACAACACGGAAAAT+TGG | + | tig0027254:8276-8295 | Msa1433300:CDS | 40.0% | |
| TTTGACAAAACAGGCTTCAC+TGG | + | tig0027254:8408-8427 | Msa1433300:CDS | 40.0% | |
| ACAAACAATCAGAGAGCTAC+AGG | - | tig0027254:8461-8480 | None:intergenic | 40.0% | |
| TCTCTGATTGTTTGTCTCCT+TGG | + | tig0027254:8466-8485 | Msa1433300:intron | 40.0% | |
| CTCTGATTGTTTGTCTCCTT+GGG | + | tig0027254:8467-8486 | Msa1433300:intron | 40.0% | |
| ! | CTTCTTTGTTTGCAGACTCT+GGG | + | tig0027254:8537-8556 | Msa1433300:intron | 40.0% |
| AATGAATTTCACTGGCACCA+AGG | - | tig0027254:8593-8612 | None:intergenic | 40.0% | |
| GTGCCAGTGAAATTCATTAC+AGG | + | tig0027254:8595-8614 | Msa1433300:CDS | 40.0% | |
| CATTACAGGTGAGCTAGATA+TGG | + | tig0027254:8609-8628 | Msa1433300:CDS | 40.0% | |
| ! | GGCATGAAGGAGTATATACA+TGG | + | tig0027254:8646-8665 | Msa1433300:CDS | 40.0% |
| ! | AAGGAGTATATACATGGAGG+AGG | + | tig0027254:8652-8671 | Msa1433300:CDS | 40.0% |
| TATACATGGAGGAGGAATGA+AGG | + | tig0027254:8660-8679 | Msa1433300:CDS | 40.0% | |
| CAACGATATCACCAACTAAG+TGG | - | tig0027254:7855-7874 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTCTACGTAGGAA+GGG | - | tig0027254:8003-8022 | None:intergenic | 40.0% |
| ! | ATTTGGGTTTCTACGTAGGA+AGG | - | tig0027254:8004-8023 | None:intergenic | 40.0% |
| TTTACCTGGTTCCTATGACA+TGG | - | tig0027254:8208-8227 | None:intergenic | 40.0% | |
| GTCATAGGAACCAGGTAAAA+TGG | + | tig0027254:8209-8228 | Msa1433300:intron | 40.0% | |
| ! | ATCTCAGCTTCCATTTTACC+TGG | - | tig0027254:8222-8241 | None:intergenic | 40.0% |
| ATCCTCACAACACGGAAAAT+TGG | + | tig0027254:8276-8295 | Msa1433300:CDS | 40.0% | |
| TTTGACAAAACAGGCTTCAC+TGG | + | tig0027254:8408-8427 | Msa1433300:CDS | 40.0% | |
| ACAAACAATCAGAGAGCTAC+AGG | - | tig0027254:8461-8480 | None:intergenic | 40.0% | |
| TCTCTGATTGTTTGTCTCCT+TGG | + | tig0027254:8466-8485 | Msa1433300:intron | 40.0% | |
| CTCTGATTGTTTGTCTCCTT+GGG | + | tig0027254:8467-8486 | Msa1433300:intron | 40.0% | |
| ! | CTTCTTTGTTTGCAGACTCT+GGG | + | tig0027254:8537-8556 | Msa1433300:intron | 40.0% |
| AATGAATTTCACTGGCACCA+AGG | - | tig0027254:8593-8612 | None:intergenic | 40.0% | |
| GTGCCAGTGAAATTCATTAC+AGG | + | tig0027254:8595-8614 | Msa1433300:CDS | 40.0% | |
| CATTACAGGTGAGCTAGATA+TGG | + | tig0027254:8609-8628 | Msa1433300:CDS | 40.0% | |
| ! | GGCATGAAGGAGTATATACA+TGG | + | tig0027254:8646-8665 | Msa1433300:CDS | 40.0% |
| ! | AAGGAGTATATACATGGAGG+AGG | + | tig0027254:8652-8671 | Msa1433300:CDS | 40.0% |
| TATACATGGAGGAGGAATGA+AGG | + | tig0027254:8660-8679 | Msa1433300:CDS | 40.0% | |
| AGGCATAGAACACAGAACAG+TGG | + | tig0027254:7624-7643 | Msa1433300:CDS | 45.0% | |
| CACAGAACAGTGGAAGTGAA+TGG | + | tig0027254:7634-7653 | Msa1433300:CDS | 45.0% | |
| CCATGAAGGAACAAGACTAC+TGG | - | tig0027254:7697-7716 | None:intergenic | 45.0% | |
| !! | CCAGTAGTCTTGTTCCTTCA+TGG | + | tig0027254:7694-7713 | Msa1433300:CDS | 45.0% |
| GTTGCTCTCATAGACTCACT+TGG | + | tig0027254:7871-7890 | Msa1433300:CDS | 45.0% | |
| ! | CATGATTGGGGTGCCTTAAT+TGG | + | tig0027254:7919-7938 | Msa1433300:CDS | 45.0% |
| ! | ATTGGGGTGCCTTAATTGGT+TGG | + | tig0027254:7923-7942 | Msa1433300:CDS | 45.0% |
| ! | ACGTAGGCTTTGACTCTTTC+AGG | - | tig0027254:7967-7986 | None:intergenic | 45.0% |
| GGGACTACTAAGACAAACGT+AGG | - | tig0027254:7983-8002 | None:intergenic | 45.0% | |
| GATCACTTGCGTGATGTGTA+TGG | + | tig0027254:8036-8055 | Msa1433300:CDS | 45.0% | |
| TGATCCATGTCATAGGAACC+AGG | + | tig0027254:8201-8220 | Msa1433300:intron | 45.0% | |
| GAAGCTGAGATTGCTGAAGT+TGG | + | tig0027254:8231-8250 | Msa1433300:CDS | 45.0% | |
| ! | GACCAATTTTCCGTGTTGTG+AGG | - | tig0027254:8281-8300 | None:intergenic | 45.0% |
| TCGTCTTCTGTAAGCCAAGA+GGG | - | tig0027254:8366-8385 | None:intergenic | 45.0% | |
| ! | GCTTCTTTGTTTGCAGACTC+TGG | + | tig0027254:8536-8555 | Msa1433300:intron | 45.0% |
| GATATGGTGTACACTTCGCT+AGG | + | tig0027254:8625-8644 | Msa1433300:CDS | 45.0% | |
| GGAAGATGTGCCGAATTTAG+AGG | + | tig0027254:8681-8700 | Msa1433300:CDS | 45.0% | |
| AGGCATAGAACACAGAACAG+TGG | + | tig0027254:7624-7643 | Msa1433300:CDS | 45.0% | |
| CACAGAACAGTGGAAGTGAA+TGG | + | tig0027254:7634-7653 | Msa1433300:CDS | 45.0% | |
| CCATGAAGGAACAAGACTAC+TGG | - | tig0027254:7697-7716 | None:intergenic | 45.0% | |
| !! | CCAGTAGTCTTGTTCCTTCA+TGG | + | tig0027254:7694-7713 | Msa1433300:CDS | 45.0% |
| GTTGCTCTCATAGACTCACT+TGG | + | tig0027254:7871-7890 | Msa1433300:CDS | 45.0% | |
| ! | CATGATTGGGGTGCCTTAAT+TGG | + | tig0027254:7919-7938 | Msa1433300:CDS | 45.0% |
| ! | ATTGGGGTGCCTTAATTGGT+TGG | + | tig0027254:7923-7942 | Msa1433300:CDS | 45.0% |
| ! | ACGTAGGCTTTGACTCTTTC+AGG | - | tig0027254:7967-7986 | None:intergenic | 45.0% |
| GGGACTACTAAGACAAACGT+AGG | - | tig0027254:7983-8002 | None:intergenic | 45.0% | |
| GATCACTTGCGTGATGTGTA+TGG | + | tig0027254:8036-8055 | Msa1433300:CDS | 45.0% | |
| TGATCCATGTCATAGGAACC+AGG | + | tig0027254:8201-8220 | Msa1433300:intron | 45.0% | |
| GAAGCTGAGATTGCTGAAGT+TGG | + | tig0027254:8231-8250 | Msa1433300:CDS | 45.0% | |
| ! | GACCAATTTTCCGTGTTGTG+AGG | - | tig0027254:8281-8300 | None:intergenic | 45.0% |
| TCGTCTTCTGTAAGCCAAGA+GGG | - | tig0027254:8366-8385 | None:intergenic | 45.0% | |
| ! | GCTTCTTTGTTTGCAGACTC+TGG | + | tig0027254:8536-8555 | Msa1433300:intron | 45.0% |
| GATATGGTGTACACTTCGCT+AGG | + | tig0027254:8625-8644 | Msa1433300:CDS | 45.0% | |
| GGAAGATGTGCCGAATTTAG+AGG | + | tig0027254:8681-8700 | Msa1433300:CDS | 45.0% | |
| CATCACTGTCTCCAAAGCCA+CGG | - | tig0027254:7801-7820 | None:intergenic | 50.0% | |
| ! | TACTTGCCGGTGGGAAGTAT+TGG | - | tig0027254:8306-8325 | None:intergenic | 50.0% |
| ATACTTCCCACCGGCAAGTA+CGG | + | tig0027254:8306-8325 | Msa1433300:CDS | 50.0% | |
| GAATCCAGTTCCGTACTTGC+CGG | - | tig0027254:8319-8338 | None:intergenic | 50.0% | |
| GTACGGAACTGGATTCAACC+CGG | + | tig0027254:8323-8342 | Msa1433300:CDS | 50.0% | |
| TTCTGTAAGCCAAGAGGGCA+AGG | - | tig0027254:8361-8380 | None:intergenic | 50.0% | |
| GTCGTCTTCTGTAAGCCAAG+AGG | - | tig0027254:8367-8386 | None:intergenic | 50.0% | |
| GACAAAACAGGCTTCACTGG+AGG | + | tig0027254:8411-8430 | Msa1433300:CDS | 50.0% | |
| ! | AAGGTTTTCACTCCGGTCCA+TGG | - | tig0027254:8574-8593 | None:intergenic | 50.0% |
| ATGGACCGGAGTGAAAACCT+TGG | + | tig0027254:8573-8592 | Msa1433300:CDS | 50.0% | |
| ! | TGGCACCAAGGTTTTCACTC+CGG | - | tig0027254:8581-8600 | None:intergenic | 50.0% |
| GTACACTTCGCTAGGCATGA+AGG | + | tig0027254:8633-8652 | Msa1433300:CDS | 50.0% | |
| !! | AGGGCACCGATTAGAACTTC+AGG | - | tig0027254:8789-8808 | None:intergenic | 50.0% |
| CATCACTGTCTCCAAAGCCA+CGG | - | tig0027254:7801-7820 | None:intergenic | 50.0% | |
| ! | TACTTGCCGGTGGGAAGTAT+TGG | - | tig0027254:8306-8325 | None:intergenic | 50.0% |
| ATACTTCCCACCGGCAAGTA+CGG | + | tig0027254:8306-8325 | Msa1433300:CDS | 50.0% | |
| GAATCCAGTTCCGTACTTGC+CGG | - | tig0027254:8319-8338 | None:intergenic | 50.0% | |
| GTACGGAACTGGATTCAACC+CGG | + | tig0027254:8323-8342 | Msa1433300:CDS | 50.0% | |
| TTCTGTAAGCCAAGAGGGCA+AGG | - | tig0027254:8361-8380 | None:intergenic | 50.0% | |
| GTCGTCTTCTGTAAGCCAAG+AGG | - | tig0027254:8367-8386 | None:intergenic | 50.0% | |
| GACAAAACAGGCTTCACTGG+AGG | + | tig0027254:8411-8430 | Msa1433300:CDS | 50.0% | |
| ! | AAGGTTTTCACTCCGGTCCA+TGG | - | tig0027254:8574-8593 | None:intergenic | 50.0% |
| ATGGACCGGAGTGAAAACCT+TGG | + | tig0027254:8573-8592 | Msa1433300:CDS | 50.0% | |
| ! | TGGCACCAAGGTTTTCACTC+CGG | - | tig0027254:8581-8600 | None:intergenic | 50.0% |
| GTACACTTCGCTAGGCATGA+AGG | + | tig0027254:8633-8652 | Msa1433300:CDS | 50.0% | |
| !! | AGGGCACCGATTAGAACTTC+AGG | - | tig0027254:8789-8808 | None:intergenic | 50.0% |
| AGAGTTCGGGGAAGCCATGA+AGG | - | tig0027254:7711-7730 | None:intergenic | 55.0% | |
| TTCATGGCTTCCCCGAACTC+TGG | + | tig0027254:7710-7729 | Msa1433300:CDS | 55.0% | |
| TCCCCGAACTCTGGTACTCA+TGG | + | tig0027254:7719-7738 | Msa1433300:CDS | 55.0% | |
| GCCATGAGTACCAGAGTTCG+GGG | - | tig0027254:7723-7742 | None:intergenic | 55.0% | |
| CGCCATGAGTACCAGAGTTC+GGG | - | tig0027254:7724-7743 | None:intergenic | 55.0% | |
| GCGCCATGAGTACCAGAGTT+CGG | - | tig0027254:7725-7744 | None:intergenic | 55.0% | |
| AACTGAGGGCCACAATCTGG+TGG | - | tig0027254:7747-7766 | None:intergenic | 55.0% | |
| ATTGTGGCCCTCAGTTCCCT+CGG | + | tig0027254:7751-7770 | Msa1433300:CDS | 55.0% | |
| TCTCCAAAGCCACGGAGATC+GGG | - | tig0027254:7793-7812 | None:intergenic | 55.0% | |
| GTCTCCAAAGCCACGGAGAT+CGG | - | tig0027254:7794-7813 | None:intergenic | 55.0% | |
| GGTCCTCCAATACTTCCCAC+CGG | + | tig0027254:8297-8316 | Msa1433300:CDS | 55.0% | |
| !! | TTGCCGGTGGGAAGTATTGG+AGG | - | tig0027254:8303-8322 | None:intergenic | 55.0% |
| TCTGGGAGCTCACAACTCCA+TGG | + | tig0027254:8554-8573 | Msa1433300:CDS | 55.0% | |
| GAGCTCACAACTCCATGGAC+CGG | + | tig0027254:8559-8578 | Msa1433300:CDS | 55.0% | |
| AGAGTTCGGGGAAGCCATGA+AGG | - | tig0027254:7711-7730 | None:intergenic | 55.0% | |
| TTCATGGCTTCCCCGAACTC+TGG | + | tig0027254:7710-7729 | Msa1433300:CDS | 55.0% | |
| TCCCCGAACTCTGGTACTCA+TGG | + | tig0027254:7719-7738 | Msa1433300:CDS | 55.0% | |
| GCCATGAGTACCAGAGTTCG+GGG | - | tig0027254:7723-7742 | None:intergenic | 55.0% | |
| CGCCATGAGTACCAGAGTTC+GGG | - | tig0027254:7724-7743 | None:intergenic | 55.0% | |
| GCGCCATGAGTACCAGAGTT+CGG | - | tig0027254:7725-7744 | None:intergenic | 55.0% | |
| AACTGAGGGCCACAATCTGG+TGG | - | tig0027254:7747-7766 | None:intergenic | 55.0% | |
| ATTGTGGCCCTCAGTTCCCT+CGG | + | tig0027254:7751-7770 | Msa1433300:CDS | 55.0% | |
| TCTCCAAAGCCACGGAGATC+GGG | - | tig0027254:7793-7812 | None:intergenic | 55.0% | |
| GTCTCCAAAGCCACGGAGAT+CGG | - | tig0027254:7794-7813 | None:intergenic | 55.0% | |
| GGTCCTCCAATACTTCCCAC+CGG | + | tig0027254:8297-8316 | Msa1433300:CDS | 55.0% | |
| !! | TTGCCGGTGGGAAGTATTGG+AGG | - | tig0027254:8303-8322 | None:intergenic | 55.0% |
| TCTGGGAGCTCACAACTCCA+TGG | + | tig0027254:8554-8573 | Msa1433300:CDS | 55.0% | |
| GAGCTCACAACTCCATGGAC+CGG | + | tig0027254:8559-8578 | Msa1433300:CDS | 55.0% | |
| CTCATGGCGCCACCAGATTG+TGG | + | tig0027254:7735-7754 | Msa1433300:CDS | 60.0% | |
| GGGAACTGAGGGCCACAATC+TGG | - | tig0027254:7750-7769 | None:intergenic | 60.0% | |
| GTGGTAGCCGAGGGAACTGA+GGG | - | tig0027254:7761-7780 | None:intergenic | 60.0% | |
| CCAGTTCCGTACTTGCCGGT+GGG | - | tig0027254:8315-8334 | None:intergenic | 60.0% | |
| TCCAGTTCCGTACTTGCCGG+TGG | - | tig0027254:8316-8335 | None:intergenic | 60.0% | |
| !! | GCAAGGTGTCAGGGGTATCC+GGG | - | tig0027254:8344-8363 | None:intergenic | 60.0% |
| !! | GGCAAGGTGTCAGGGGTATC+CGG | - | tig0027254:8345-8364 | None:intergenic | 60.0% |
| ! | CCAAGAGGGCAAGGTGTCAG+GGG | - | tig0027254:8352-8371 | None:intergenic | 60.0% |
| ! | GCCAAGAGGGCAAGGTGTCA+GGG | - | tig0027254:8353-8372 | None:intergenic | 60.0% |
| ! | AGCCAAGAGGGCAAGGTGTC+AGG | - | tig0027254:8354-8373 | None:intergenic | 60.0% |
| CTCATGGCGCCACCAGATTG+TGG | + | tig0027254:7735-7754 | Msa1433300:CDS | 60.0% | |
| GGGAACTGAGGGCCACAATC+TGG | - | tig0027254:7750-7769 | None:intergenic | 60.0% | |
| GTGGTAGCCGAGGGAACTGA+GGG | - | tig0027254:7761-7780 | None:intergenic | 60.0% | |
| CCAGTTCCGTACTTGCCGGT+GGG | - | tig0027254:8315-8334 | None:intergenic | 60.0% | |
| TCCAGTTCCGTACTTGCCGG+TGG | - | tig0027254:8316-8335 | None:intergenic | 60.0% | |
| !! | GCAAGGTGTCAGGGGTATCC+GGG | - | tig0027254:8344-8363 | None:intergenic | 60.0% |
| !! | GGCAAGGTGTCAGGGGTATC+CGG | - | tig0027254:8345-8364 | None:intergenic | 60.0% |
| ! | CCAAGAGGGCAAGGTGTCAG+GGG | - | tig0027254:8352-8371 | None:intergenic | 60.0% |
| ! | GCCAAGAGGGCAAGGTGTCA+GGG | - | tig0027254:8353-8372 | None:intergenic | 60.0% |
| ! | AGCCAAGAGGGCAAGGTGTC+AGG | - | tig0027254:8354-8373 | None:intergenic | 60.0% |
| CGTGGTAGCCGAGGGAACTG+AGG | - | tig0027254:7762-7781 | None:intergenic | 65.0% | |
| AGCTACGGCGTGGTAGCCGA+GGG | - | tig0027254:7770-7789 | None:intergenic | 65.0% | |
| GCCACGGAGATCGGGAGCTA+CGG | - | tig0027254:7785-7804 | None:intergenic | 65.0% | |
| GCTCCCGATCTCCGTGGCTT+TGG | + | tig0027254:7787-7806 | Msa1433300:CDS | 65.0% | |
| CCCACCGGCAAGTACGGAAC+TGG | + | tig0027254:8312-8331 | Msa1433300:CDS | 65.0% | |
| CCCCTGACACCTTGCCCTCT+TGG | + | tig0027254:8349-8368 | Msa1433300:CDS | 65.0% | |
| CGTGGTAGCCGAGGGAACTG+AGG | - | tig0027254:7762-7781 | None:intergenic | 65.0% | |
| AGCTACGGCGTGGTAGCCGA+GGG | - | tig0027254:7770-7789 | None:intergenic | 65.0% | |
| GCCACGGAGATCGGGAGCTA+CGG | - | tig0027254:7785-7804 | None:intergenic | 65.0% | |
| GCTCCCGATCTCCGTGGCTT+TGG | + | tig0027254:7787-7806 | Msa1433300:CDS | 65.0% | |
| CCCACCGGCAAGTACGGAAC+TGG | + | tig0027254:8312-8331 | Msa1433300:CDS | 65.0% | |
| CCCCTGACACCTTGCCCTCT+TGG | + | tig0027254:8349-8368 | Msa1433300:CDS | 65.0% | |
| GAGCTACGGCGTGGTAGCCG+AGG | - | tig0027254:7771-7790 | None:intergenic | 70.0% | |
| GGAGATCGGGAGCTACGGCG+TGG | - | tig0027254:7780-7799 | None:intergenic | 70.0% | |
| GCCGTAGCTCCCGATCTCCG+TGG | + | tig0027254:7781-7800 | Msa1433300:CDS | 70.0% | |
| GAGCTACGGCGTGGTAGCCG+AGG | - | tig0027254:7771-7790 | None:intergenic | 70.0% | |
| GGAGATCGGGAGCTACGGCG+TGG | - | tig0027254:7780-7799 | None:intergenic | 70.0% | |
| GCCGTAGCTCCCGATCTCCG+TGG | + | tig0027254:7781-7800 | Msa1433300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027254 | gene | 7593 | 9101 | 7593 | ID=Msa1433300;Name=Msa1433300 |
| tig0027254 | mRNA | 7593 | 9101 | 7593 | ID=Msa1433300-mRNA-1;Parent=Msa1433300;Name=Msa1433300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|3|303|319 |
| tig0027254 | exon | 7593 | 8086 | 7593 | ID=Msa1433300-mRNA-1:exon:8574;Parent=Msa1433300-mRNA-1 |
| tig0027254 | exon | 8216 | 8460 | 8216 | ID=Msa1433300-mRNA-1:exon:8575;Parent=Msa1433300-mRNA-1 |
| tig0027254 | exon | 8552 | 9101 | 8552 | ID=Msa1433300-mRNA-1:exon:8576;Parent=Msa1433300-mRNA-1 |
| tig0027254 | five_prime_UTR | 7593 | 7618 | 7593 | ID=Msa1433300-mRNA-1:five_prime_utr;Parent=Msa1433300-mRNA-1 |
| tig0027254 | CDS | 7619 | 8086 | 7619 | ID=Msa1433300-mRNA-1:cds;Parent=Msa1433300-mRNA-1 |
| tig0027254 | CDS | 8216 | 8460 | 8216 | ID=Msa1433300-mRNA-1:cds;Parent=Msa1433300-mRNA-1 |
| tig0027254 | CDS | 8552 | 8798 | 8552 | ID=Msa1433300-mRNA-1:cds;Parent=Msa1433300-mRNA-1 |
| tig0027254 | three_prime_UTR | 8799 | 9101 | 8799 | ID=Msa1433300-mRNA-1:three_prime_utr;Parent=Msa1433300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
