AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0640580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0640580 MtrunA17_Chr4g0024861 96.283 538 20 0 1 538 1 538 0.0 1057
Msa0640580 MtrunA17_Chr2g0322441 87.861 519 63 0 18 536 21 539 0.0 941
Msa0640580 MtrunA17_Chr4g0024641 94.643 448 23 1 87 534 11 457 0.0 870
Msa0640580 MtrunA17_Chr4g0024641 79.518 83 17 0 456 538 875 957 5.65e-36 143
Msa0640580 MtrunA17_Chr4g0024641 68.687 99 24 2 438 534 798 891 2.14e-33 135
Msa0640580 MtrunA17_Chr4g0024641 79.747 79 16 0 456 534 503 581 4.68e-33 134
Msa0640580 MtrunA17_Chr4g0024641 79.747 79 16 0 456 534 565 643 4.68e-33 134
Msa0640580 MtrunA17_Chr4g0024641 79.747 79 16 0 456 534 627 705 4.68e-33 134
Msa0640580 MtrunA17_Chr4g0024641 79.747 79 16 0 456 534 689 767 4.68e-33 134
Msa0640580 MtrunA17_Chr4g0024641 95.238 63 3 0 472 534 457 519 1.45e-32 133
Msa0640580 MtrunA17_Chr4g0024641 78.481 79 17 0 456 534 751 829 5.77e-32 131
Msa0640580 MtrunA17_Chr4g0038671 71.751 531 144 2 12 537 10 539 0.0 804
Msa0640580 MtrunA17_Chr1g0157341 72.316 531 147 0 7 537 9 539 0.0 803
Msa0640580 MtrunA17_Chr3g0143671 69.303 531 163 0 7 537 10 540 0.0 795
Msa0640580 MtrunA17_Chr4g0075071 72.075 530 146 1 9 536 11 540 0.0 777
Msa0640580 MtrunA17_Chr8g0374271 60.348 517 202 2 22 537 26 540 0.0 659
Msa0640580 MtrunA17_Chr5g0402831 61.731 520 195 2 18 537 22 537 0.0 655
Msa0640580 MtrunA17_Chr8g0374261 55.056 534 232 4 6 533 3 534 0.0 620
Msa0640580 MtrunA17_Chr4g0043251 51.763 539 248 5 4 531 1 538 0.0 561
Msa0640580 MtrunA17_Chr4g0043261 50.847 531 256 4 5 531 3 532 0.0 549
Msa0640580 MtrunA17_Chr3g0121151 51.028 535 253 4 5 531 44 577 0.0 546
Msa0640580 MtrunA17_Chr3g0121161 51.607 529 247 4 11 531 50 577 0.0 545
Msa0640580 MtrunA17_Chr4g0056511 51.371 547 242 7 9 532 6 551 0.0 532
Msa0640580 MtrunA17_Chr3g0079321 48.556 554 260 9 1 531 1 552 9.72e-179 516
Msa0640580 MtrunA17_Chr3g0121171 51.215 535 252 4 5 531 579 1112 5.17e-176 547
Msa0640580 MtrunA17_Chr3g0121171 51.028 535 253 4 5 531 1154 1687 5.23e-175 545
Msa0640580 MtrunA17_Chr3g0121171 52.510 518 237 4 22 531 21 537 4.69e-174 542
Msa0640580 MtrunA17_Chr3g0121171 49.346 535 253 5 5 531 1729 2253 2.37e-164 515
Msa0640580 MtrunA17_Chr7g0234061 49.240 526 247 7 24 531 26 549 2.15e-168 490
Msa0640580 MtrunA17_Chr1g0197301 45.455 330 177 3 205 531 1 330 4.07e-92 285
Msa0640580 MtrunA17_Chr4g0075781 56.731 208 47 2 131 336 1 167 5.90e-67 214
Msa0640580 MtrunA17_Chr5g0404361 30.335 567 349 19 1 530 54 611 4.52e-57 201
Msa0640580 MtrunA17_Chr5g0404341 30.452 509 301 18 23 490 30 526 3.22e-54 192
Msa0640580 MtrunA17_Chr3g0118321 27.972 572 345 17 8 531 11 563 9.86e-54 191
Msa0640580 MtrunA17_Chr8g0382691 28.796 573 320 15 22 535 29 572 2.58e-51 184
Msa0640580 MtrunA17_Chr5g0436461 28.827 503 307 13 27 490 24 514 1.09e-50 182
Msa0640580 MtrunA17_Chr4g0005921 28.023 521 323 15 7 490 12 517 1.07e-49 179
Msa0640580 MtrunA17_Chr3g0104061 27.188 537 352 13 27 530 26 556 5.07e-49 177
Msa0640580 MtrunA17_Chr5g0429511 26.512 562 366 16 8 530 5 558 5.34e-48 175
Msa0640580 MtrunA17_Chr1g0197311 40.336 238 100 6 11 209 9 243 1.12e-47 166
Msa0640580 MtrunA17_Chr3g0118331 27.923 573 343 17 8 531 11 562 7.67e-47 172
Msa0640580 MtrunA17_Chr5g0431581 27.592 569 353 18 7 530 6 560 7.95e-45 166
Msa0640580 MtrunA17_Chr4g0024651 92.771 83 6 0 1 83 1 83 6.26e-44 151
Msa0640580 MtrunA17_Chr3g0114211 27.831 521 332 15 8 490 16 530 5.09e-43 161
Msa0640580 MtrunA17_Chr8g0346581 26.346 520 342 13 8 490 16 531 5.32e-42 158
Msa0640580 MtrunA17_Chr5g0437681 26.806 526 336 14 9 490 7 527 1.17e-39 152
Msa0640580 MtrunA17_Chr7g0237441 26.901 513 321 18 27 490 33 540 1.42e-38 149
Msa0640580 MtrunA17_Chr7g0238941 24.382 566 378 14 8 530 20 578 2.54e-38 148
Msa0640580 MtrunA17_Chr7g0237491 26.172 512 326 17 27 490 33 540 7.94e-37 144
Msa0640580 MtrunA17_Chr7g0238351 26.265 514 324 17 27 490 33 541 1.43e-36 143
Msa0640580 MtrunA17_Chr7g0240991 26.104 498 309 18 44 490 42 531 1.54e-36 143
Msa0640580 MtrunA17_Chr2g0278811 24.623 597 360 17 11 530 24 607 3.95e-35 139
Msa0640580 MtrunA17_Chr7g0240971 26.163 516 325 15 29 495 27 535 5.48e-35 138
Msa0640580 MtrunA17_Chr4g0031901 24.704 506 335 13 27 490 44 545 9.98e-33 132
Msa0640580 MtrunA17_Chr7g0238981 24.219 512 335 14 27 490 47 553 1.08e-31 129
Msa0640580 MtrunA17_Chr4g0008521 25.000 552 357 17 29 530 28 572 1.58e-30 125
Msa0640580 MtrunA17_Chr3g0118351 24.633 341 205 8 231 531 6 334 3.88e-21 95.1
Msa0640580 MtrunA17_Chr3g0133871 28.641 206 141 4 1 201 3 207 1.25e-19 87.8
Msa0640580 MtrunA17_Chr3g0118341 34.884 172 102 6 4 172 8 172 2.19e-19 87.0
Msa0640580 MtrunA17_Chr3g0133861 28.758 306 165 14 226 490 7 300 6.25e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0640580 AT1G76160.1 71.698 530 148 2 7 536 9 536 0.0 801
Msa0640580 AT4G22010.1 70.919 533 153 2 7 537 5 537 0.0 798
Msa0640580 AT1G41830.1 67.547 530 171 1 8 537 10 538 0.0 767
Msa0640580 AT1G21850.1 67.420 531 171 2 7 537 9 537 0.0 765
Msa0640580 AT1G21860.1 66.038 530 178 2 8 537 10 537 0.0 748
Msa0640580 AT4G38420.1 63.619 536 189 3 8 537 11 546 0.0 711
Msa0640580 AT4G28090.1 59.848 528 208 4 9 533 11 537 0.0 665
Msa0640580 AT5G66920.1 57.500 520 219 1 18 537 28 545 0.0 634
Msa0640580 AT4G38420.3 62.420 471 171 3 8 472 11 481 0.0 607
Msa0640580 AT4G37160.1 54.340 530 238 3 7 533 9 537 0.0 585
Msa0640580 AT1G55570.1 54.749 537 230 5 8 535 13 545 0.0 582
Msa0640580 AT3G13400.2 53.803 539 240 4 5 535 5 542 0.0 577
Msa0640580 AT3G13400.1 53.803 539 240 4 5 535 5 542 0.0 577
Msa0640580 AT2G23630.2 56.093 517 226 1 17 533 25 540 0.0 576
Msa0640580 AT2G23630.1 56.093 517 226 1 17 533 20 535 0.0 575
Msa0640580 AT1G55560.1 53.084 535 242 4 9 535 8 541 0.0 573
Msa0640580 AT3G13390.1 55.747 522 221 4 23 535 24 544 0.0 572
Msa0640580 AT4G38420.2 62.162 444 162 3 8 445 11 454 0.0 570
Msa0640580 AT4G12420.1 50.635 551 249 7 1 531 1 548 0.0 547
Msa0640580 AT4G12420.2 50.635 551 249 7 1 531 1 548 0.0 547
Msa0640580 AT5G48450.1 49.534 537 257 8 8 532 10 544 0.0 526
Msa0640580 AT5G48450.2 49.534 537 257 8 8 532 10 544 0.0 525
Msa0640580 AT1G75790.1 48.244 541 268 4 4 533 5 544 5.20e-179 515
Msa0640580 AT5G51480.1 48.790 537 254 8 15 531 16 551 3.89e-178 514
Msa0640580 AT4G25240.2 49.446 542 252 8 10 531 12 551 5.72e-176 509
Msa0640580 AT4G25240.1 49.446 542 252 8 10 531 12 551 5.72e-176 509
Msa0640580 AT4G37160.2 55.656 442 192 3 7 445 9 449 9.94e-173 496
Msa0640580 AT5G21105.1 28.183 589 338 20 3 531 13 576 2.50e-55 196
Msa0640580 AT5G21105.3 28.938 546 308 19 3 488 13 538 8.83e-54 191
Msa0640580 AT4G39830.1 26.990 578 354 15 9 533 18 580 2.53e-53 190
Msa0640580 AT5G21100.1 27.648 557 324 18 31 531 28 561 4.19e-52 187
Msa0640580 AT2G38080.1 27.434 565 368 14 1 530 1 558 5.29e-51 183
Msa0640580 AT5G58910.2 28.463 527 331 14 4 490 7 527 9.48e-51 183
Msa0640580 AT5G58910.3 28.463 527 330 15 4 490 7 526 3.49e-49 179
Msa0640580 AT5G01190.1 27.018 570 364 17 1 530 1 558 4.71e-46 170
Msa0640580 AT2G46570.1 26.916 509 316 14 27 490 32 529 2.05e-44 166
Msa0640580 AT5G58910.1 28.986 483 290 15 48 490 14 483 8.87e-44 163
Msa0640580 AT5G03260.1 27.500 520 329 16 9 490 8 517 1.68e-43 163
Msa0640580 AT2G30210.1 27.799 536 335 18 1 490 1 530 3.45e-43 162
Msa0640580 AT5G01190.2 26.667 570 352 18 1 530 1 544 1.29e-42 160
Msa0640580 AT4G39830.3 26.978 493 293 14 93 533 6 483 3.47e-40 152
Msa0640580 AT4G39830.2 26.978 493 293 14 93 533 8 485 4.11e-40 152
Msa0640580 AT5G01050.1 27.273 572 353 19 10 532 13 570 3.25e-39 151
Msa0640580 AT1G18140.1 26.173 554 318 19 10 490 6 541 2.86e-38 148
Msa0640580 AT5G09360.1 25.385 520 347 14 6 490 16 529 1.39e-37 146
Msa0640580 AT5G01040.1 27.547 530 319 19 10 490 13 526 5.18e-37 145
Msa0640580 AT2G40370.1 24.813 536 347 13 7 490 9 540 6.46e-37 144
Msa0640580 AT5G05390.1 25.667 487 323 11 41 490 41 525 2.08e-36 143
Msa0640580 AT2G29130.1 25.287 522 314 13 27 490 30 533 1.19e-35 140
Msa0640580 AT4G39830.4 26.166 493 284 14 93 533 8 472 1.49e-35 139
Msa0640580 AT5G07130.1 26.654 529 333 19 10 490 8 529 1.93e-35 140
Msa0640580 AT5G48100.1 27.198 489 302 15 48 490 43 523 4.03e-35 139
Msa0640580 AT2G46570.2 26.549 452 276 14 84 490 4 444 1.86e-34 136
Msa0640580 AT3G09220.1 24.858 527 344 14 7 490 10 527 4.40e-33 133
Msa0640580 AT5G21105.2 28.249 354 206 11 205 531 53 385 1.83e-31 126
Msa0640580 AT5G60020.1 23.356 578 380 17 8 530 8 577 4.05e-30 124
Msa0640580 AT5G60020.2 23.993 546 352 17 8 498 8 545 5.71e-29 121
Msa0640580 AT5G60020.3 23.420 538 351 16 48 530 14 545 6.98e-29 120
Msa0640580 AT5G07130.2 25.893 448 280 17 90 490 2 444 6.44e-23 102
Msa0640580 AT5G07130.3 25.893 448 280 17 90 490 2 444 6.44e-23 102
Msa0640580 AT3G09220.2 24.651 430 283 11 100 490 3 430 8.34e-22 99.0

Find 155 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCTGCTGGAAGTGTTTC+TGG 0.146839 4_3:+39654557 Msa0640580:CDS
CAAACAATGTTGTGTCTTCT+TGG 0.193584 4_3:+39652307 Msa0640580:CDS
CAAGCTTATTTAGATGTCTA+AGG 0.281326 4_3:+39656626 Msa0640580:three_prime_UTR
ATGAACCTTTCCTCATTTCT+TGG 0.290193 4_3:+39652704 Msa0640580:CDS
TGGTAGGTTCCTTGTGGATT+TGG 0.297781 4_3:-39655330 None:intergenic
GACTCACTTGACATTCATTT+GGG 0.313425 4_3:+39654419 Msa0640580:CDS
CCACAAGGAACCTACCATTA+TGG 0.317959 4_3:+39655336 Msa0640580:CDS
CCGCCACCGGTGGGGTTGTC+CGG 0.319670 4_3:-39655522 None:intergenic
TGACTCACTTGACATTCATT+TGG 0.322743 4_3:+39654418 Msa0640580:CDS
CAGGGAAGACTTACAGATTC+CGG 0.326068 4_3:+39654294 Msa0640580:intron
GTACCAATCTCCTGCCAATA+TGG 0.328899 4_3:-39653692 None:intergenic
ATGGTAAATTTGTTTGGTTT+TGG 0.332967 4_3:+39652224 Msa0640580:five_prime_UTR
AATACACTCTAAGATAAAAT+TGG 0.334224 4_3:-39656329 None:intergenic
ATCCGGAGATTTCACCATAT+TGG 0.345336 4_3:+39653678 Msa0640580:CDS
TTGATAAATGGACAATTTCC+AGG 0.349584 4_3:+39652622 Msa0640580:CDS
GTTCCTTGTGGATTTGGTCT+TGG 0.355975 4_3:-39655324 None:intergenic
TGAATAGACTCTATTCATCT+TGG 0.356080 4_3:-39656480 None:intergenic
CAAATGGAGAAGATCCTTAC+AGG 0.364480 4_3:+39652354 Msa0640580:CDS
CTCCACAAAACCTCGAAAAT+CGG 0.365811 4_3:-39655574 None:intergenic
CACAAGGCAGCAGGAGGTTA+TGG 0.375456 4_3:+39653604 Msa0640580:CDS
TTGCAATCATGGCACATTGA+TGG 0.376663 4_3:+39655624 Msa0640580:CDS
TGAAGTGCGTTGCTTGGAAT+AGG 0.378012 4_3:-39656381 None:intergenic
TATAATTGGAATGTTACATA+TGG 0.378868 4_3:+39652380 Msa0640580:CDS
AAACACTTTATTAAAAGAAT+AGG 0.384825 4_3:+39656552 Msa0640580:three_prime_UTR
CTGAAGATACTTTGCAATCA+TGG 0.396158 4_3:+39655613 Msa0640580:CDS
TTGAACAAGCTCGCTCTCTA+AGG 0.396269 4_3:+39654621 Msa0640580:CDS
CAAGCTTCATCTTATGCCCT+TGG 0.398188 4_3:-39654358 None:intergenic
GTTTCTGGTCCTCTTCCTGC+TGG 0.399456 4_3:+39654572 Msa0640580:CDS
TCATCTCTCACTGAATTTGC+AGG 0.400229 4_3:-39656354 None:intergenic
GAATAGACTCTATTCATCTT+GGG 0.406100 4_3:-39656479 None:intergenic
GGACATAGCTTCTTTGTAGT+AGG 0.408807 4_3:+39655645 Msa0640580:CDS
GAATTGGGCAAGACAGTACT+TGG 0.414940 4_3:+39656302 Msa0640580:CDS
CATGATTGCAAAGTATCTTC+AGG 0.417916 4_3:-39655612 None:intergenic
TCACCATATTGGCAGGAGAT+TGG 0.428797 4_3:+39653689 Msa0640580:CDS
GGGGCAGACGTATTCTGTAT+TGG 0.447694 4_3:+39654439 Msa0640580:CDS
CCCTTGGATTCTGAAATTGA+TGG 0.448632 4_3:-39654342 None:intergenic
GGAATGTGAGGTCTGAGAAT+TGG 0.449805 4_3:+39656286 Msa0640580:CDS
AAGTTCTGTCCTGGAGAGAT+TGG 0.452707 4_3:-39653517 None:intergenic
GAAGTGCGTTGCTTGGAATA+GGG 0.453207 4_3:-39656380 None:intergenic
CGCCACCGGTGGGGTTGTCC+GGG 0.453611 4_3:-39655521 None:intergenic
TTGTGTTTATCATTCCATAA+TGG 0.454708 4_3:-39655350 None:intergenic
GAATGTGAGGTCTGAGAATT+GGG 0.454791 4_3:+39656287 Msa0640580:CDS
CCATTGATGACAAGTCCATC+AGG 0.456809 4_3:-39653853 None:intergenic
AGTGATCTTCCTTTCCCTGA+TGG 0.460805 4_3:+39653838 Msa0640580:CDS
ATTTCAGTGGTTGGTCCAGC+AGG 0.462597 4_3:-39654587 None:intergenic
CCGGACAACCCCACCGGTGG+CGG 0.466606 4_3:+39655522 Msa0640580:CDS
AAGTGCATGGTAAATTTGTT+TGG 0.467441 4_3:+39652218 Msa0640580:five_prime_UTR
ACTGACTCAATCTGTGGCCC+TGG 0.467858 4_3:-39652640 None:intergenic
CCTGATGGACTTGTCATCAA+TGG 0.468702 4_3:+39653853 Msa0640580:CDS
CCACACTGAAGTGCGTTGCT+TGG 0.471358 4_3:-39656387 None:intergenic
TCCACTTGGAGTTAAACAAC+AGG 0.471870 4_3:+39652412 Msa0640580:CDS
TACAGTGCAGTCCATGACTT+TGG 0.473369 4_3:-39656237 None:intergenic
TACACATTCACTGTTGATCA+AGG 0.474298 4_3:+39653892 Msa0640580:CDS
ACTTCAGTGTGGCAAGGCAG+TGG 0.478106 4_3:+39656398 Msa0640580:CDS
AATTCTGCTCCAATTATCAA+TGG 0.480816 4_3:+39655393 Msa0640580:CDS
CTTGCATTCCACAAGGCAGC+AGG 0.481451 4_3:+39653595 Msa0640580:CDS
GACAACCCCACCGGTGGCGG+CGG 0.483320 4_3:+39655525 Msa0640580:CDS
TAATCCCCACATTTGATATC+CGG 0.487792 4_3:-39654313 None:intergenic
TTACTTGTTGCATGTGCAAA+TGG 0.488058 4_3:+39652338 Msa0640580:CDS
TCATGGCAGGATGGAATGTA+TGG 0.493019 4_3:+39653484 Msa0640580:CDS
CTTCATTACAGTAACTCTGC+TGG 0.493285 4_3:+39654545 Msa0640580:CDS
ATCACTTCCGCTATCTAAAA+CGG 0.493695 4_3:-39653821 None:intergenic
ATGAAGCTTGTTGAGGTGGA+AGG 0.497246 4_3:+39654371 Msa0640580:CDS
AGTTTGAGTGGTGTATCAGC+AGG 0.498988 4_3:-39655453 None:intergenic
CACAACAAGGTTCACGTCAC+AGG 0.499799 4_3:+39654502 Msa0640580:CDS
TGTTCAAATTCTAAAGCAAA+AGG 0.499877 4_3:+39652126 Msa0640580:five_prime_UTR
TTCCAATTATAAAACCTGTA+AGG 0.505183 4_3:-39652368 None:intergenic
TCTCCGGATGGAGGATCAAA+AGG 0.505297 4_3:-39653664 None:intergenic
AATTGCTCGTAGTACAGTTC+AGG 0.508901 4_3:+39655934 Msa0640580:CDS
AACAGTGAATGTGTAAGCAT+TGG 0.510570 4_3:-39653884 None:intergenic
ACAACAATGTAGTAGTCATT+TGG 0.512474 4_3:-39654479 None:intergenic
GGAGATTTCACCATATTGGC+AGG 0.513998 4_3:+39653682 Msa0640580:CDS
GACATAGCTTCTTTGTAGTA+GGG 0.514001 4_3:+39655646 Msa0640580:CDS
ATTGGAATTTGCAGGATGGA+TGG 0.516169 4_3:+39655863 Msa0640580:intron
AGAAGTCAAAATGAATATCC+TGG 0.517094 4_3:-39656448 None:intergenic
ACCTGTTGTTTAACTCCAAG+TGG 0.517766 4_3:-39652413 None:intergenic
CTTCAAGTAAAAGATCAGAT+TGG 0.518189 4_3:+39653550 Msa0640580:CDS
ACGAATTGTCCAATCTCTCC+AGG 0.520893 4_3:+39653508 Msa0640580:CDS
AGAGTTACTGTAATGAAGAA+TGG 0.523401 4_3:-39654540 None:intergenic
TGCCAATATGGTGAAATCTC+CGG 0.525221 4_3:-39653680 None:intergenic
ATATAAGTGAAGTTCTGTCC+TGG 0.525875 4_3:-39653526 None:intergenic
TCCATCAATTTCAGAATCCA+AGG 0.526236 4_3:+39654341 Msa0640580:CDS
CTGCTGCCTTGTGGAATGCA+AGG 0.530626 4_3:-39653594 None:intergenic
GACTGCACTGTACATGCCAT+TGG 0.535391 4_3:+39656248 Msa0640580:CDS
AAGATAACCGCCGCCACCGG+TGG 0.541603 4_3:-39655532 None:intergenic
GTTTATCATTCCATAATGGT+AGG 0.542317 4_3:-39655346 None:intergenic
AAAAGGTAAAAGAAAAGTGT+AGG 0.542903 4_3:+39652143 Msa0640580:five_prime_UTR
GATGGAGGATCAAAAGGTAC+AGG 0.546916 4_3:-39653658 None:intergenic
TATGGAGATATTTATCCACT+TGG 0.549980 4_3:+39652398 Msa0640580:CDS
AATATTGAATTGAAAGTGCA+TGG 0.550776 4_3:+39652205 Msa0640580:five_prime_UTR
CAGATTCCGGATATCAAATG+TGG 0.551399 4_3:+39654307 Msa0640580:CDS
CTGATTACTTCAAGATCCAA+GGG 0.552515 4_3:+39655478 Msa0640580:CDS
AGATAACCGCCGCCACCGGT+GGG 0.552834 4_3:-39655531 None:intergenic
GTGGTTGGTCCAGCAGGAAG+AGG 0.553379 4_3:-39654581 None:intergenic
TTATCTTCAGACTTCTGTCA+TGG 0.553926 4_3:+39655548 Msa0640580:CDS
CCATAATGGTAGGTTCCTTG+TGG 0.554362 4_3:-39655336 None:intergenic
TTCCAAGTGAAAACACCCCT+TGG 0.556437 4_3:-39655494 None:intergenic
GACCAACCACTGAAATCGAT+TGG 0.557851 4_3:+39654594 Msa0640580:CDS
CTGAAGATAACCGCCGCCAC+CGG 0.560760 4_3:-39655535 None:intergenic
AGGAGGAATCTTACAGCAAG+TGG 0.561277 4_3:+39655300 Msa0640580:intron
ACACTCTAAGATAAAATTGG+TGG 0.562579 4_3:-39656326 None:intergenic
CTTCAGTGTGGCAAGGCAGT+GGG 0.563402 4_3:+39656399 Msa0640580:CDS
GCTGATTACTTCAAGATCCA+AGG 0.566624 4_3:+39655477 Msa0640580:CDS
CACATTCCCACATTATCCAA+TGG 0.568508 4_3:-39656264 None:intergenic
AGTATCCCGGACAACCCCAC+CGG 0.569660 4_3:+39655516 Msa0640580:CDS
TGATAAATGGACAATTTCCA+GGG 0.570857 4_3:+39652623 Msa0640580:CDS
TGCTGCCTTGTGGAATGCAA+GGG 0.573809 4_3:-39653593 None:intergenic
TAAGATGAAGCTTGTTGAGG+TGG 0.574215 4_3:+39654367 Msa0640580:CDS
CACAGGTGTATCCAAAGTCA+TGG 0.575020 4_3:+39656226 Msa0640580:intron
ACAATGTAGTAGTCATTTGG+TGG 0.577035 4_3:-39654476 None:intergenic
GCAGAGGAGAAACTCATGGC+AGG 0.580251 4_3:+39653471 Msa0640580:CDS
GATTCTGAAATTGATGGATG+TGG 0.586463 4_3:-39654336 None:intergenic
AAGTAATCAGCTAGTTTGAG+TGG 0.592921 4_3:-39655465 None:intergenic
TCCTTCCCTTGCATTCCACA+AGG 0.593677 4_3:+39653588 Msa0640580:CDS
CATAACCTCCTGCTGCCTTG+TGG 0.594177 4_3:-39653603 None:intergenic
GACCAATCGATTTCAGTGGT+TGG 0.598810 4_3:-39654596 None:intergenic
ATGTGGGAATGTGGAATGTG+AGG 0.600216 4_3:+39656274 Msa0640580:CDS
ATAGGAATGGAGTGCTGCAG+AGG 0.601936 4_3:+39653455 Msa0640580:intron
AGGAGAAACTCATGGCAGGA+TGG 0.603275 4_3:+39653475 Msa0640580:CDS
ACAAGACTAACCAAGAAATG+AGG 0.605612 4_3:-39652714 None:intergenic
AGATTCCGGATATCAAATGT+GGG 0.607158 4_3:+39654308 Msa0640580:CDS
ATGACAAGTCCATCAGGGAA+AGG 0.607922 4_3:-39653847 None:intergenic
ACTACATTGTTGTCACAACA+AGG 0.609823 4_3:+39654489 Msa0640580:CDS
GGAATTTGCAGGATGGATGG+AGG 0.610007 4_3:+39655866 Msa0640580:intron
GATAACCGCCGCCACCGGTG+GGG 0.610031 4_3:-39655530 None:intergenic
ATCCCGGACAACCCCACCGG+TGG 0.615788 4_3:+39655519 Msa0640580:CDS
AACGGACCAATCGATTTCAG+TGG 0.617391 4_3:-39654600 None:intergenic
TGCTGCAGAGGAGAAACTCA+TGG 0.618620 4_3:+39653467 Msa0640580:CDS
GTACATGCCATTGGATAATG+TGG 0.618969 4_3:+39656257 Msa0640580:CDS
GGACTTGTCATCAATGGCCG+CGG 0.620003 4_3:+39653859 Msa0640580:CDS
CAACGCACTTCAGTGTGGCA+AGG 0.627303 4_3:+39656392 Msa0640580:CDS
GCATTCCACAAGGCAGCAGG+AGG 0.628336 4_3:+39653598 Msa0640580:CDS
CATTGATGACAAGTCCATCA+GGG 0.632768 4_3:-39653852 None:intergenic
TAGAGAGCGAGCTTGTTCAA+CGG 0.637365 4_3:-39654618 None:intergenic
ACTAACCAAGAAATGAGGAA+AGG 0.643027 4_3:-39652709 None:intergenic
GCATAAGATGAAGCTTGTTG+AGG 0.650000 4_3:+39654364 Msa0640580:CDS
TTAGTCACTGACTCAATCTG+TGG 0.650612 4_3:-39652646 None:intergenic
ATGGTGAAATCTCCGGATGG+AGG 0.653324 4_3:-39653673 None:intergenic
CCATCAATTTCAGAATCCAA+GGG 0.653636 4_3:+39654342 Msa0640580:CDS
GCAGGATGGATGGAGGACAA+TGG 0.655581 4_3:+39655873 Msa0640580:intron
ATGTGTAAGCATTGGAACCG+CGG 0.655680 4_3:-39653876 None:intergenic
AAGGCAGCAGGAGGTTATGG+CGG 0.659210 4_3:+39653607 Msa0640580:CDS
GTATTCTGTATTGGTTACTG+CGG 0.660650 4_3:+39654448 Msa0640580:CDS
GTTTGAGTGGTGTATCAGCA+GGG 0.670319 4_3:-39655452 None:intergenic
CATTGGATAATGTGGGAATG+TGG 0.674160 4_3:+39656265 Msa0640580:CDS
AATTGGGCAAGACAGTACTT+GGG 0.674927 4_3:+39656303 Msa0640580:CDS
GCCTTGTGGAATGCAAGGGA+AGG 0.677656 4_3:-39653589 None:intergenic
TCTTCAGACTTCTGTCATGG+CGG 0.691399 4_3:+39655551 Msa0640580:CDS
AATATGGTGAAATCTCCGGA+TGG 0.697908 4_3:-39653676 None:intergenic
GATTCCGGATATCAAATGTG+GGG 0.700602 4_3:+39654309 Msa0640580:CDS
ACTCACTTGACATTCATTTG+GGG 0.703591 4_3:+39654420 Msa0640580:CDS
CCAAGCAACGCACTTCAGTG+TGG 0.712273 4_3:+39656387 Msa0640580:CDS
GGACCAAGACCAAATCCACA+AGG 0.716812 4_3:+39655321 Msa0640580:CDS
TACATGCCATTGGATAATGT+GGG 0.717897 4_3:+39656258 Msa0640580:CDS
TGATTACTTCAAGATCCAAG+GGG 0.751364 4_3:+39655479 Msa0640580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAAAAATACTAATTG+TGG - chr4_3:39656428-39656447 None:intergenic 10.0%
!!! TTGTTATTTACTTATTTGTT+TGG - chr4_3:39653354-39653373 None:intergenic 15.0%
!! AATAAGTAAATAACAATATC+AGG + chr4_3:39653358-39653377 Msa0640580:intron 15.0%
!! TTTAGATTATGTAATTCTAT+AGG + chr4_3:39653437-39653456 Msa0640580:intron 15.0%
!! AAAATAAATCTATTAGAATG+AGG + chr4_3:39654214-39654233 Msa0640580:intron 15.0%
!! AAATAAATCTATTAGAATGA+GGG + chr4_3:39654215-39654234 Msa0640580:intron 15.0%
!!! TAATATTTTTTTTTTTCCGA+TGG + chr4_3:39654715-39654734 Msa0640580:intron 15.0%
!!! ATTAGTATTTTTATTTAACC+AGG + chr4_3:39656430-39656449 Msa0640580:exon 15.0%
!! AAACACTTTATTAAAAGAAT+AGG + chr4_3:39656552-39656571 Msa0640580:three_prime_UTR 15.0%
!! TATAATTGGAATGTTACATA+TGG + chr4_3:39652380-39652399 Msa0640580:CDS 20.0%
!!! ATGTTTTCTCAAATTTTTAG+CGG + chr4_3:39652538-39652557 Msa0640580:intron 20.0%
!! TCCATATATTCATTTCTATA+TGG + chr4_3:39652577-39652596 Msa0640580:intron 20.0%
!! ACCATATAGAAATGAATATA+TGG - chr4_3:39652581-39652600 None:intergenic 20.0%
!!! TATCAATGTTTTTAATAGCT+TGG + chr4_3:39652681-39652700 Msa0640580:CDS 20.0%
!! TCGAAATTCAAAGATTAAAT+TGG - chr4_3:39652910-39652929 None:intergenic 20.0%
!!! TATTAGTGTTGTTAGTATTT+TGG - chr4_3:39653021-39653040 None:intergenic 20.0%
!! ACAACACTAATATTTATTTC+TGG + chr4_3:39653029-39653048 Msa0640580:intron 20.0%
!!! AGACCAAATTAATTTGTTTA+TGG - chr4_3:39653089-39653108 None:intergenic 20.0%
!!! AATTTAGTCTTTAAAATCAG+AGG - chr4_3:39653282-39653301 None:intergenic 20.0%
!!! TCTGATTTTAAAGACTAAAT+TGG + chr4_3:39653281-39653300 Msa0640580:intron 20.0%
!! ATTATGTAATTCTATAGGAA+TGG + chr4_3:39653442-39653461 Msa0640580:intron 20.0%
!!! TTAATTTGTGTTTATTTTGC+AGG + chr4_3:39653789-39653808 Msa0640580:intron 20.0%
!! ATATAAATTACTGCACATAT+CGG + chr4_3:39655185-39655204 Msa0640580:intron 20.0%
!! AACAAATGATTAATTGAATC+AGG + chr4_3:39655280-39655299 Msa0640580:intron 20.0%
!!! TCTAAAGTAACAAATAGTTT+GGG - chr4_3:39655795-39655814 None:intergenic 20.0%
!!! TTCTAAAGTAACAAATAGTT+TGG - chr4_3:39655796-39655815 None:intergenic 20.0%
!!! TATTTTCCATTCTGATAATA+TGG + chr4_3:39655834-39655853 Msa0640580:intron 20.0%
!! AAATATCCATATTATCAGAA+TGG - chr4_3:39655843-39655862 None:intergenic 20.0%
!! CTGATAATATGGATATTTAT+TGG + chr4_3:39655845-39655864 Msa0640580:intron 20.0%
!! AAAATATGAATGAGTATTAG+AGG - chr4_3:39656090-39656109 None:intergenic 20.0%
!!! CATATTACTGATAATCATTT+TGG + chr4_3:39656163-39656182 Msa0640580:intron 20.0%
!!! AATACACTCTAAGATAAAAT+TGG - chr4_3:39656332-39656351 None:intergenic 20.0%
!!! TGTTCAAATTCTAAAGCAAA+AGG + chr4_3:39652126-39652145 Msa0640580:five_prime_UTR 25.0%
!! AAAAGGTAAAAGAAAAGTGT+AGG + chr4_3:39652143-39652162 Msa0640580:five_prime_UTR 25.0%
!! AATATTGAATTGAAAGTGCA+TGG + chr4_3:39652205-39652224 Msa0640580:five_prime_UTR 25.0%
!!! ATGGTAAATTTGTTTGGTTT+TGG + chr4_3:39652224-39652243 Msa0640580:five_prime_UTR 25.0%
!!! AATTTGTTTGGTTTTGGTTT+TGG + chr4_3:39652230-39652249 Msa0640580:five_prime_UTR 25.0%
!!! ATCCTTACAGGTTTTATAAT+TGG + chr4_3:39652366-39652385 Msa0640580:CDS 25.0%
! TTCCAATTATAAAACCTGTA+AGG - chr4_3:39652371-39652390 None:intergenic 25.0%
! CCAATAAATTGTGCTAAAAA+AGG - chr4_3:39652810-39652829 None:intergenic 25.0%
!!! CCTTTTTTAGCACAATTTAT+TGG + chr4_3:39652807-39652826 Msa0640580:intron 25.0%
! ATTTATTGGAGTGAATTGTA+TGG + chr4_3:39652821-39652840 Msa0640580:intron 25.0%
!!! TAGATAATTTTGAAAACAGC+TGG + chr4_3:39652859-39652878 Msa0640580:intron 25.0%
! TTTGAATTTCGACTTAATCT+CGG + chr4_3:39652918-39652937 Msa0640580:intron 25.0%
!!! GTTGTTAGTATTTTGGTTTA+AGG - chr4_3:39653014-39653033 None:intergenic 25.0%
! GGTCCATAAACAAATTAATT+TGG + chr4_3:39653083-39653102 Msa0640580:intron 25.0%
!!! GATTTTAAAGACTAAATTGG+TGG + chr4_3:39653284-39653303 Msa0640580:intron 25.0%
!! AAAACACTGAATTTTCAACA+TGG - chr4_3:39653419-39653438 None:intergenic 25.0%
! CAAGATTTCTTAAACATTGA+AGG - chr4_3:39653756-39653775 None:intergenic 25.0%
!! CAAATTTCAGGTAAACAAAT+TGG - chr4_3:39653934-39653953 None:intergenic 25.0%
! GTAGTCATACAAAACAAAAT+CGG - chr4_3:39653975-39653994 None:intergenic 25.0%
!! TGTTTTGTATGACTACTAAT+CGG + chr4_3:39653979-39653998 Msa0640580:intron 25.0%
!!! TTGTTAGATATGTTTTTCGA+GGG + chr4_3:39654002-39654021 Msa0640580:intron 25.0%
! ATTATTTGTATCGAGAAAAG+CGG - chr4_3:39654131-39654150 None:intergenic 25.0%
!! ATGCATTGACATAATTTGAT+TGG + chr4_3:39654870-39654889 Msa0640580:intron 25.0%
!!! AGTTTGCTTACTTTTCATTT+CGG - chr4_3:39655071-39655090 None:intergenic 25.0%
! AAAGTAAGCAAACTAATTCA+TGG + chr4_3:39655077-39655096 Msa0640580:intron 25.0%
! AAACTAATTCATGGTAGTTA+AGG + chr4_3:39655086-39655105 Msa0640580:intron 25.0%
! ATTTCGAAGAAAAAAATCGT+TGG + chr4_3:39655138-39655157 Msa0640580:intron 25.0%
! AAATGATTAATTGAATCAGG+AGG + chr4_3:39655283-39655302 Msa0640580:intron 25.0%
! TTGTGTTTATCATTCCATAA+TGG - chr4_3:39655353-39655372 None:intergenic 25.0%
!!! CTTTGTTTTCCATTGATAAT+TGG - chr4_3:39655405-39655424 None:intergenic 25.0%
! AATATTTATAAGGGAACCTT+TGG + chr4_3:39656020-39656039 Msa0640580:intron 25.0%
! CATCATAAATCATATGTCAA+TGG - chr4_3:39656065-39656084 None:intergenic 25.0%
!! TTTGGTCTTTAACATGATTA+AGG + chr4_3:39656181-39656200 Msa0640580:intron 25.0%
!! TTGGTCTTTAACATGATTAA+GGG + chr4_3:39656182-39656201 Msa0640580:intron 25.0%
!! GAGTTTTCTAATATGTAATG+TGG + chr4_3:39656585-39656604 Msa0640580:three_prime_UTR 25.0%
! AAGTGCATGGTAAATTTGTT+TGG + chr4_3:39652218-39652237 Msa0640580:five_prime_UTR 30.0%
!!! TTTGGTTTTGGTTTTGGTTT+TGG + chr4_3:39652236-39652255 Msa0640580:five_prime_UTR 30.0%
ACTGAGAAAAAACTGAGAAA+TGG + chr4_3:39652277-39652296 Msa0640580:exon 30.0%
CTGAGAAAAAACTGAGAAAT+GGG + chr4_3:39652278-39652297 Msa0640580:exon 30.0%
TATGGAGATATTTATCCACT+TGG + chr4_3:39652398-39652417 Msa0640580:CDS 30.0%
TTGATAAATGGACAATTTCC+AGG + chr4_3:39652622-39652641 Msa0640580:CDS 30.0%
TGATAAATGGACAATTTCCA+GGG + chr4_3:39652623-39652642 Msa0640580:CDS 30.0%
! TTGTTTCTTGTTTAATCCAC+TGG + chr4_3:39652733-39652752 Msa0640580:intron 30.0%
!! TATTTATTTCTGGAGAGCAT+TGG + chr4_3:39653039-39653058 Msa0640580:intron 30.0%
TGCCCTTAAGAATATATTGA+CGG + chr4_3:39653062-39653081 Msa0640580:intron 30.0%
GACCGTCAATATATTCTTAA+GGG - chr4_3:39653067-39653086 None:intergenic 30.0%
TTCGTCGAAATTATTTGAGA+GGG - chr4_3:39653162-39653181 None:intergenic 30.0%
ATTCGTCGAAATTATTTGAG+AGG - chr4_3:39653163-39653182 None:intergenic 30.0%
!! TCTTTAAAATCAGAGGTGTT+AGG - chr4_3:39653275-39653294 None:intergenic 30.0%
! CTGAATTTTCAACATGGATA+TGG - chr4_3:39653413-39653432 None:intergenic 30.0%
CTTCAAGTAAAAGATCAGAT+TGG + chr4_3:39653550-39653569 Msa0640580:CDS 30.0%
!!! TGTTTATTTTGCAGGATTTG+AGG + chr4_3:39653797-39653816 Msa0640580:intron 30.0%
!!! GTTTATTTTGCAGGATTTGA+GGG + chr4_3:39653798-39653817 Msa0640580:intron 30.0%
! GTTGTTAGATATGTTTTTCG+AGG + chr4_3:39654001-39654020 Msa0640580:intron 30.0%
CATAACTGTTGAAGAGATAA+GGG - chr4_3:39654043-39654062 None:intergenic 30.0%
ACATAACTGTTGAAGAGATA+AGG - chr4_3:39654044-39654063 None:intergenic 30.0%
AGTAGTTAACTAATATCAGC+TGG - chr4_3:39654075-39654094 None:intergenic 30.0%
TTATTTGTATCGAGAAAAGC+GGG - chr4_3:39654130-39654149 None:intergenic 30.0%
TAAATCTATTAGAATGAGGG+CGG + chr4_3:39654218-39654237 Msa0640580:intron 30.0%
ACAACAATGTAGTAGTCATT+TGG - chr4_3:39654482-39654501 None:intergenic 30.0%
AGAGTTACTGTAATGAAGAA+TGG - chr4_3:39654543-39654562 None:intergenic 30.0%
CGAATTCAATTCTTATCCAT+CGG - chr4_3:39654734-39654753 None:intergenic 30.0%
CGATGGATAAGAATTGAATT+CGG + chr4_3:39654732-39654751 Msa0640580:intron 30.0%
! TCATTTGTTAAAGTCAGCAT+GGG - chr4_3:39655269-39655288 None:intergenic 30.0%
! ATCATTTGTTAAAGTCAGCA+TGG - chr4_3:39655270-39655289 None:intergenic 30.0%
GTTTATCATTCCATAATGGT+AGG - chr4_3:39655349-39655368 None:intergenic 30.0%
AATTCTGCTCCAATTATCAA+TGG + chr4_3:39655393-39655412 Msa0640580:CDS 30.0%
GGATATTTATTGGAATTTGC+AGG + chr4_3:39655855-39655874 Msa0640580:intron 30.0%
ATTTATTGGAATTTGCAGGA+TGG + chr4_3:39655859-39655878 Msa0640580:intron 30.0%
TCTTTCTATGTTTCTTACAC+AGG + chr4_3:39656209-39656228 Msa0640580:intron 30.0%
!! ACACTCTAAGATAAAATTGG+TGG - chr4_3:39656329-39656348 None:intergenic 30.0%
AGAAGTCAAAATGAATATCC+TGG - chr4_3:39656451-39656470 None:intergenic 30.0%
GAATAGACTCTATTCATCTT+GGG - chr4_3:39656482-39656501 None:intergenic 30.0%
TGAATAGACTCTATTCATCT+TGG - chr4_3:39656483-39656502 None:intergenic 30.0%
CAAGCTTATTTAGATGTCTA+AGG + chr4_3:39656626-39656645 Msa0640580:three_prime_UTR 30.0%
CAAACAATGTTGTGTCTTCT+TGG + chr4_3:39652307-39652326 Msa0640580:CDS 35.0%
! TTACTTGTTGCATGTGCAAA+TGG + chr4_3:39652338-39652357 Msa0640580:CDS 35.0%
!!! TCTCAAATTTTTAGCGGTGT+CGG + chr4_3:39652544-39652563 Msa0640580:intron 35.0%
! ATATGGTTTGTGAAATGTGC+AGG + chr4_3:39652594-39652613 Msa0640580:intron 35.0%
! TATGGTTTGTGAAATGTGCA+GGG + chr4_3:39652595-39652614 Msa0640580:intron 35.0%
ATGAACCTTTCCTCATTTCT+TGG + chr4_3:39652704-39652723 Msa0640580:CDS 35.0%
ACTAACCAAGAAATGAGGAA+AGG - chr4_3:39652712-39652731 None:intergenic 35.0%
ACAAGACTAACCAAGAAATG+AGG - chr4_3:39652717-39652736 None:intergenic 35.0%
TAATCTCGGACATGGATATA+AGG + chr4_3:39652932-39652951 Msa0640580:intron 35.0%
!!! TAGTATTTTGGTTTAAGGCG+AGG - chr4_3:39653009-39653028 None:intergenic 35.0%
GGACCGTCAATATATTCTTA+AGG - chr4_3:39653068-39653087 None:intergenic 35.0%
ATAAATCGAACCATCCTCAA+AGG + chr4_3:39653181-39653200 Msa0640580:intron 35.0%
! TTGTATTGTTCCTTTGAGGA+TGG - chr4_3:39653194-39653213 None:intergenic 35.0%
TCGATTGTATTGTTCCTTTG+AGG - chr4_3:39653198-39653217 None:intergenic 35.0%
TCAAAGGAACAATACAATCG+AGG + chr4_3:39653197-39653216 Msa0640580:intron 35.0%
ATATAAGTGAAGTTCTGTCC+TGG - chr4_3:39653529-39653548 None:intergenic 35.0%
ATCACTTCCGCTATCTAAAA+CGG - chr4_3:39653824-39653843 None:intergenic 35.0%
AACAGTGAATGTGTAAGCAT+TGG - chr4_3:39653887-39653906 None:intergenic 35.0%
TACACATTCACTGTTGATCA+AGG + chr4_3:39653892-39653911 Msa0640580:CDS 35.0%
CTGCTATGGTATCAAATTTC+AGG - chr4_3:39653946-39653965 None:intergenic 35.0%
AACTAATATCAGCTGGATCT+AGG - chr4_3:39654068-39654087 None:intergenic 35.0%
! TAAAGTGCTTGATTGTTTGC+AGG + chr4_3:39654275-39654294 Msa0640580:intron 35.0%
! AAAGTGCTTGATTGTTTGCA+GGG + chr4_3:39654276-39654295 Msa0640580:intron 35.0%
AGATTCCGGATATCAAATGT+GGG + chr4_3:39654308-39654327 Msa0640580:CDS 35.0%
TAATCCCCACATTTGATATC+CGG - chr4_3:39654316-39654335 None:intergenic 35.0%
!! GATTCTGAAATTGATGGATG+TGG - chr4_3:39654339-39654358 None:intergenic 35.0%
TCCATCAATTTCAGAATCCA+AGG + chr4_3:39654341-39654360 Msa0640580:CDS 35.0%
CCATCAATTTCAGAATCCAA+GGG + chr4_3:39654342-39654361 Msa0640580:CDS 35.0%
TGACTCACTTGACATTCATT+TGG + chr4_3:39654418-39654437 Msa0640580:CDS 35.0%
GACTCACTTGACATTCATTT+GGG + chr4_3:39654419-39654438 Msa0640580:CDS 35.0%
ACTCACTTGACATTCATTTG+GGG + chr4_3:39654420-39654439 Msa0640580:CDS 35.0%
!! GTATTCTGTATTGGTTACTG+CGG + chr4_3:39654448-39654467 Msa0640580:CDS 35.0%
ACAATGTAGTAGTCATTTGG+TGG - chr4_3:39654479-39654498 None:intergenic 35.0%
ACTACATTGTTGTCACAACA+AGG + chr4_3:39654489-39654508 Msa0640580:CDS 35.0%
AATTGAATTCGGCAGTACTT+AGG + chr4_3:39654743-39654762 Msa0640580:intron 35.0%
ATTGAATTCGGCAGTACTTA+GGG + chr4_3:39654744-39654763 Msa0640580:intron 35.0%
CATTTATTTAACTACCACCG+AGG - chr4_3:39654815-39654834 None:intergenic 35.0%
GAAATACTGGAAAACATGCT+CGG - chr4_3:39654912-39654931 None:intergenic 35.0%
! AGCATGTTTTCCAGTATTTC+CGG + chr4_3:39654912-39654931 Msa0640580:intron 35.0%
TCTTCGAAATTGCGTATGTT+AGG - chr4_3:39655128-39655147 None:intergenic 35.0%
! AAGTAATCAGCTAGTTTGAG+TGG - chr4_3:39655468-39655487 None:intergenic 35.0%
CTGATTACTTCAAGATCCAA+GGG + chr4_3:39655478-39655497 Msa0640580:CDS 35.0%
TGATTACTTCAAGATCCAAG+GGG + chr4_3:39655479-39655498 Msa0640580:CDS 35.0%
TTATCTTCAGACTTCTGTCA+TGG + chr4_3:39655548-39655567 Msa0640580:CDS 35.0%
! CATGATTGCAAAGTATCTTC+AGG - chr4_3:39655615-39655634 None:intergenic 35.0%
CTGAAGATACTTTGCAATCA+TGG + chr4_3:39655613-39655632 Msa0640580:CDS 35.0%
GACATAGCTTCTTTGTAGTA+GGG + chr4_3:39655646-39655665 Msa0640580:CDS 35.0%
! AGCATTAAGCCTTATCACAA+GGG - chr4_3:39655977-39655996 None:intergenic 35.0%
! AAGCATTAAGCCTTATCACA+AGG - chr4_3:39655978-39655997 None:intergenic 35.0%
TAGCATCATCTACAAACCAA+AGG - chr4_3:39656039-39656058 None:intergenic 35.0%
TACATGCCATTGGATAATGT+GGG + chr4_3:39656258-39656277 Msa0640580:CDS 35.0%
!! GACTGCTTTTCTTTGCACAA+AGG + chr4_3:39652170-39652189 Msa0640580:five_prime_UTR 40.0%
CAAATGGAGAAGATCCTTAC+AGG + chr4_3:39652354-39652373 Msa0640580:CDS 40.0%
TCCACTTGGAGTTAAACAAC+AGG + chr4_3:39652412-39652431 Msa0640580:CDS 40.0%
! ACCTGTTGTTTAACTCCAAG+TGG - chr4_3:39652416-39652435 None:intergenic 40.0%
! ATGGTTTGTGAAATGTGCAG+GGG + chr4_3:39652596-39652615 Msa0640580:intron 40.0%
!! GTGCAGGGGATTTTGATAAA+TGG + chr4_3:39652610-39652629 Msa0640580:intron 40.0%
!! TTAGTCACTGACTCAATCTG+TGG - chr4_3:39652649-39652668 None:intergenic 40.0%
TGCAACTAATGCTTTACCAG+TGG - chr4_3:39652752-39652771 None:intergenic 40.0%
TTTCGACTTAATCTCGGACA+TGG + chr4_3:39652924-39652943 Msa0640580:intron 40.0%
ATGGATATAAGGTTGGAGTG+AGG + chr4_3:39652943-39652962 Msa0640580:intron 40.0%
TGGATATAAGGTTGGAGTGA+GGG + chr4_3:39652944-39652963 Msa0640580:intron 40.0%
ATTATTTGAGAGGGACTCGA+GGG - chr4_3:39653153-39653172 None:intergenic 40.0%
AATTATTTGAGAGGGACTCG+AGG - chr4_3:39653154-39653173 None:intergenic 40.0%
!! TAAAATCAGAGGTGTTAGGC+AGG - chr4_3:39653271-39653290 None:intergenic 40.0%
! CACGTCAGTTTTTATACTCG+CGG - chr4_3:39653311-39653330 None:intergenic 40.0%
AATATGGTGAAATCTCCGGA+TGG - chr4_3:39653679-39653698 None:intergenic 40.0%
ATCCGGAGATTTCACCATAT+TGG + chr4_3:39653678-39653697 Msa0640580:CDS 40.0%
TGCCAATATGGTGAAATCTC+CGG - chr4_3:39653683-39653702 None:intergenic 40.0%
! CATTGATGACAAGTCCATCA+GGG - chr4_3:39653855-39653874 None:intergenic 40.0%
! AAAATCGGCTTCATCTGCTA+TGG - chr4_3:39653960-39653979 None:intergenic 40.0%
GTTGAAGAGATAAGGGATTG+TGG - chr4_3:39654036-39654055 None:intergenic 40.0%
GTTAACTACTAGCGTGTAGA+CGG + chr4_3:39654085-39654104 Msa0640580:intron 40.0%
CAGATTCCGGATATCAAATG+TGG + chr4_3:39654307-39654326 Msa0640580:CDS 40.0%
GATTCCGGATATCAAATGTG+GGG + chr4_3:39654309-39654328 Msa0640580:CDS 40.0%
!! CCCTTGGATTCTGAAATTGA+TGG - chr4_3:39654345-39654364 None:intergenic 40.0%
!! GCATAAGATGAAGCTTGTTG+AGG + chr4_3:39654364-39654383 Msa0640580:CDS 40.0%
!! TAAGATGAAGCTTGTTGAGG+TGG + chr4_3:39654367-39654386 Msa0640580:CDS 40.0%
CTTCATTACAGTAACTCTGC+TGG + chr4_3:39654545-39654564 Msa0640580:CDS 40.0%
TTGAATTCGGCAGTACTTAG+GGG + chr4_3:39654745-39654764 Msa0640580:intron 40.0%
GTTAAGTGTGCACTATGTTC+CGG - chr4_3:39654934-39654953 None:intergenic 40.0%
! ACACTCGTGAATTTTCACGA+AGG - chr4_3:39654969-39654988 None:intergenic 40.0%
TGTTCAACGATTGTCAGCAA+TGG - chr4_3:39655214-39655233 None:intergenic 40.0%
GCTGATTACTTCAAGATCCA+AGG + chr4_3:39655477-39655496 Msa0640580:CDS 40.0%
!!! GTTTTCACTTGGAAGTATCC+CGG + chr4_3:39655503-39655522 Msa0640580:CDS 40.0%
CTCCACAAAACCTCGAAAAT+CGG - chr4_3:39655577-39655596 None:intergenic 40.0%
TTGCAATCATGGCACATTGA+TGG + chr4_3:39655624-39655643 Msa0640580:CDS 40.0%
GGACATAGCTTCTTTGTAGT+AGG + chr4_3:39655645-39655664 Msa0640580:CDS 40.0%
ATGGAGGATACATGGTTTAC+GGG - chr4_3:39655744-39655763 None:intergenic 40.0%
CATGGAGGATACATGGTTTA+CGG - chr4_3:39655745-39655764 None:intergenic 40.0%
TATTTCGATCATGTTGCGCA+TGG - chr4_3:39655763-39655782 None:intergenic 40.0%
ATTGGAATTTGCAGGATGGA+TGG + chr4_3:39655863-39655882 Msa0640580:intron 40.0%
AATTGCTCGTAGTACAGTTC+AGG + chr4_3:39655934-39655953 Msa0640580:CDS 40.0%
GTACATGCCATTGGATAATG+TGG + chr4_3:39656257-39656276 Msa0640580:CDS 40.0%
CACATTCCCACATTATCCAA+TGG - chr4_3:39656267-39656286 None:intergenic 40.0%
CATTGGATAATGTGGGAATG+TGG + chr4_3:39656265-39656284 Msa0640580:CDS 40.0%
GAATGTGAGGTCTGAGAATT+GGG + chr4_3:39656287-39656306 Msa0640580:CDS 40.0%
AATTGGGCAAGACAGTACTT+GGG + chr4_3:39656303-39656322 Msa0640580:CDS 40.0%
TCATCTCTCACTGAATTTGC+AGG - chr4_3:39656357-39656376 None:intergenic 40.0%
GAAAACAGCTGGACAATGCA+TGG + chr4_3:39652870-39652889 Msa0640580:intron 45.0%
CTCGGACATGGATATAAGGT+TGG + chr4_3:39652936-39652955 Msa0640580:intron 45.0%
TCATGGCAGGATGGAATGTA+TGG + chr4_3:39653484-39653503 Msa0640580:CDS 45.0%
ACGAATTGTCCAATCTCTCC+AGG + chr4_3:39653508-39653527 Msa0640580:CDS 45.0%
AAGTTCTGTCCTGGAGAGAT+TGG - chr4_3:39653520-39653539 None:intergenic 45.0%
! GATGGAGGATCAAAAGGTAC+AGG - chr4_3:39653661-39653680 None:intergenic 45.0%
! GTACCTTTTGATCCTCCATC+CGG + chr4_3:39653661-39653680 Msa0640580:CDS 45.0%
GGAGATTTCACCATATTGGC+AGG + chr4_3:39653682-39653701 Msa0640580:CDS 45.0%
TCACCATATTGGCAGGAGAT+TGG + chr4_3:39653689-39653708 Msa0640580:CDS 45.0%
GTACCAATCTCCTGCCAATA+TGG - chr4_3:39653695-39653714 None:intergenic 45.0%
!! TTGAGGGCCGTTTTAGATAG+CGG + chr4_3:39653814-39653833 Msa0640580:CDS 45.0%
AGTGATCTTCCTTTCCCTGA+TGG + chr4_3:39653838-39653857 Msa0640580:CDS 45.0%
ATGACAAGTCCATCAGGGAA+AGG - chr4_3:39653850-39653869 None:intergenic 45.0%
! CCATTGATGACAAGTCCATC+AGG - chr4_3:39653856-39653875 None:intergenic 45.0%
!! CCTGATGGACTTGTCATCAA+TGG + chr4_3:39653853-39653872 Msa0640580:CDS 45.0%
!! ATGTGTAAGCATTGGAACCG+CGG - chr4_3:39653879-39653898 None:intergenic 45.0%
TATCGAGAAAAGCGGGTAGA+CGG - chr4_3:39654123-39654142 None:intergenic 45.0%
CAGGGAAGACTTACAGATTC+CGG + chr4_3:39654294-39654313 Msa0640580:intron 45.0%
CAAGCTTCATCTTATGCCCT+TGG - chr4_3:39654361-39654380 None:intergenic 45.0%
!! ATGAAGCTTGTTGAGGTGGA+AGG + chr4_3:39654371-39654390 Msa0640580:CDS 45.0%
!! AACTCTGCTGGAAGTGTTTC+TGG + chr4_3:39654557-39654576 Msa0640580:CDS 45.0%
GACCAACCACTGAAATCGAT+TGG + chr4_3:39654594-39654613 Msa0640580:CDS 45.0%
! GACCAATCGATTTCAGTGGT+TGG - chr4_3:39654599-39654618 None:intergenic 45.0%
! AACGGACCAATCGATTTCAG+TGG - chr4_3:39654603-39654622 None:intergenic 45.0%
! TAGAGAGCGAGCTTGTTCAA+CGG - chr4_3:39654621-39654640 None:intergenic 45.0%
TTGAACAAGCTCGCTCTCTA+AGG + chr4_3:39654621-39654640 Msa0640580:CDS 45.0%
GCACTATGTTCCGGAAATAC+TGG - chr4_3:39654925-39654944 None:intergenic 45.0%
! CTTGAGATCGAAAGCGTGTT+TGG - chr4_3:39655237-39655256 None:intergenic 45.0%
GTTAAAGTCAGCATGGGACA+CGG - chr4_3:39655263-39655282 None:intergenic 45.0%
AGGAGGAATCTTACAGCAAG+TGG + chr4_3:39655300-39655319 Msa0640580:intron 45.0%
! GTTCCTTGTGGATTTGGTCT+TGG - chr4_3:39655327-39655346 None:intergenic 45.0%
TGGTAGGTTCCTTGTGGATT+TGG - chr4_3:39655333-39655352 None:intergenic 45.0%
CCATAATGGTAGGTTCCTTG+TGG - chr4_3:39655339-39655358 None:intergenic 45.0%
CCACAAGGAACCTACCATTA+TGG + chr4_3:39655336-39655355 Msa0640580:CDS 45.0%
GTTTGAGTGGTGTATCAGCA+GGG - chr4_3:39655455-39655474 None:intergenic 45.0%
AGTTTGAGTGGTGTATCAGC+AGG - chr4_3:39655456-39655475 None:intergenic 45.0%
!!! ATCCAAGGGGTGTTTTCACT+TGG + chr4_3:39655492-39655511 Msa0640580:CDS 45.0%
TTCCAAGTGAAAACACCCCT+TGG - chr4_3:39655497-39655516 None:intergenic 45.0%
TCTTCAGACTTCTGTCATGG+CGG + chr4_3:39655551-39655570 Msa0640580:CDS 45.0%
!! CGATTTTCGAGGTTTTGTGG+AGG + chr4_3:39655575-39655594 Msa0640580:CDS 45.0%
GTTCGCTATCCCTTGTGATA+AGG + chr4_3:39655965-39655984 Msa0640580:intron 45.0%
CACAGGTGTATCCAAAGTCA+TGG + chr4_3:39656226-39656245 Msa0640580:intron 45.0%
TACAGTGCAGTCCATGACTT+TGG - chr4_3:39656240-39656259 None:intergenic 45.0%
ATGTGGGAATGTGGAATGTG+AGG + chr4_3:39656274-39656293 Msa0640580:CDS 45.0%
GGAATGTGAGGTCTGAGAAT+TGG + chr4_3:39656286-39656305 Msa0640580:CDS 45.0%
GAATTGGGCAAGACAGTACT+TGG + chr4_3:39656302-39656321 Msa0640580:CDS 45.0%
GAAGTGCGTTGCTTGGAATA+GGG - chr4_3:39656383-39656402 None:intergenic 45.0%
TGAAGTGCGTTGCTTGGAAT+AGG - chr4_3:39656384-39656403 None:intergenic 45.0%
!! ATATAACTTTAATATTTATA+AGG + chr4_3:39656010-39656029 Msa0640580:intron 5.0%
!! TATAACTTTAATATTTATAA+GGG + chr4_3:39656011-39656030 Msa0640580:intron 5.0%
!! ATCAGAGGTGTTAGGCAGGT+TGG - chr4_3:39653267-39653286 None:intergenic 50.0%
!! ATAGGAATGGAGTGCTGCAG+AGG + chr4_3:39653455-39653474 Msa0640580:intron 50.0%
TGCTGCAGAGGAGAAACTCA+TGG + chr4_3:39653467-39653486 Msa0640580:CDS 50.0%
AGGAGAAACTCATGGCAGGA+TGG + chr4_3:39653475-39653494 Msa0640580:CDS 50.0%
TCCTTCCCTTGCATTCCACA+AGG + chr4_3:39653588-39653607 Msa0640580:CDS 50.0%
TGCTGCCTTGTGGAATGCAA+GGG - chr4_3:39653596-39653615 None:intergenic 50.0%
TCTCCGGATGGAGGATCAAA+AGG - chr4_3:39653667-39653686 None:intergenic 50.0%
ATGGTGAAATCTCCGGATGG+AGG - chr4_3:39653676-39653695 None:intergenic 50.0%
ATCGAGAAAAGCGGGTAGAC+GGG - chr4_3:39654122-39654141 None:intergenic 50.0%
GGGGCAGACGTATTCTGTAT+TGG + chr4_3:39654439-39654458 Msa0640580:CDS 50.0%
CACAACAAGGTTCACGTCAC+AGG + chr4_3:39654502-39654521 Msa0640580:CDS 50.0%
! ATTTCAGTGGTTGGTCCAGC+AGG - chr4_3:39654590-39654609 None:intergenic 50.0%
CAACCACTTGCACTAGACCT+CGG + chr4_3:39654795-39654814 Msa0640580:intron 50.0%
GGACCAAGACCAAATCCACA+AGG + chr4_3:39655321-39655340 Msa0640580:CDS 50.0%
!! GGCCGATTTTCGAGGTTTTG+TGG + chr4_3:39655572-39655591 Msa0640580:CDS 50.0%
TGTTGCGCATGGAGGATACA+TGG - chr4_3:39655752-39655771 None:intergenic 50.0%
TTCGATCATGTTGCGCATGG+AGG - chr4_3:39655760-39655779 None:intergenic 50.0%
GGAATTTGCAGGATGGATGG+AGG + chr4_3:39655866-39655885 Msa0640580:intron 50.0%
GACTGCACTGTACATGCCAT+TGG + chr4_3:39656248-39656267 Msa0640580:CDS 50.0%
! ACTGACTCAATCTGTGGCCC+TGG - chr4_3:39652643-39652662 None:intergenic 55.0%
GCAGAGGAGAAACTCATGGC+AGG + chr4_3:39653471-39653490 Msa0640580:CDS 55.0%
GCCTTGTGGAATGCAAGGGA+AGG - chr4_3:39653592-39653611 None:intergenic 55.0%
CTGCTGCCTTGTGGAATGCA+AGG - chr4_3:39653597-39653616 None:intergenic 55.0%
CTTGCATTCCACAAGGCAGC+AGG + chr4_3:39653595-39653614 Msa0640580:CDS 55.0%
CATAACCTCCTGCTGCCTTG+TGG - chr4_3:39653606-39653625 None:intergenic 55.0%
CACAAGGCAGCAGGAGGTTA+TGG + chr4_3:39653604-39653623 Msa0640580:CDS 55.0%
AAGGCAGCAGGAGGTTATGG+CGG + chr4_3:39653607-39653626 Msa0640580:CDS 55.0%
GGACTTGTCATCAATGGCCG+CGG + chr4_3:39653859-39653878 Msa0640580:CDS 55.0%
!! GTTTCTGGTCCTCTTCCTGC+TGG + chr4_3:39654572-39654591 Msa0640580:CDS 55.0%
CGAGGTCTAGTGCAAGTGGT+TGG - chr4_3:39654797-39654816 None:intergenic 55.0%
CTGGAAAACATGCTCGGCAG+TGG - chr4_3:39654906-39654925 None:intergenic 55.0%
GCAGGATGGATGGAGGACAA+TGG + chr4_3:39655873-39655892 Msa0640580:intron 55.0%
CCACACTGAAGTGCGTTGCT+TGG - chr4_3:39656390-39656409 None:intergenic 55.0%
CCAAGCAACGCACTTCAGTG+TGG + chr4_3:39656387-39656406 Msa0640580:CDS 55.0%
CAACGCACTTCAGTGTGGCA+AGG + chr4_3:39656392-39656411 Msa0640580:CDS 55.0%
ACTTCAGTGTGGCAAGGCAG+TGG + chr4_3:39656398-39656417 Msa0640580:CDS 55.0%
CTTCAGTGTGGCAAGGCAGT+GGG + chr4_3:39656399-39656418 Msa0640580:CDS 55.0%
GCATTCCACAAGGCAGCAGG+AGG + chr4_3:39653598-39653617 Msa0640580:CDS 60.0%
! GTGGTTGGTCCAGCAGGAAG+AGG - chr4_3:39654584-39654603 None:intergenic 60.0%
CCACCGAGGTCTAGTGCAAG+TGG - chr4_3:39654801-39654820 None:intergenic 60.0%
CCACTTGCACTAGACCTCGG+TGG + chr4_3:39654798-39654817 Msa0640580:intron 60.0%
AGTATCCCGGACAACCCCAC+CGG + chr4_3:39655516-39655535 Msa0640580:CDS 60.0%
CTGAAGATAACCGCCGCCAC+CGG - chr4_3:39655538-39655557 None:intergenic 60.0%
!! GTCATGGCGGCCGATTTTCG+AGG + chr4_3:39655564-39655583 Msa0640580:CDS 60.0%
AGATAACCGCCGCCACCGGT+GGG - chr4_3:39655534-39655553 None:intergenic 65.0%
AAGATAACCGCCGCCACCGG+TGG - chr4_3:39655535-39655554 None:intergenic 65.0%
ATCCCGGACAACCCCACCGG+TGG + chr4_3:39655519-39655538 Msa0640580:CDS 70.0%
GATAACCGCCGCCACCGGTG+GGG - chr4_3:39655533-39655552 None:intergenic 70.0%
CGCCACCGGTGGGGTTGTCC+GGG - chr4_3:39655524-39655543 None:intergenic 75.0%
CCGCCACCGGTGGGGTTGTC+CGG - chr4_3:39655525-39655544 None:intergenic 75.0%
CCGGACAACCCCACCGGTGG+CGG + chr4_3:39655522-39655541 Msa0640580:CDS 75.0%
! GACAACCCCACCGGTGGCGG+CGG + chr4_3:39655525-39655544 Msa0640580:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 39652106 39656713 39652106 ID=Msa0640580;Name=Msa0640580
chr4_3 mRNA 39652106 39656713 39652106 ID=Msa0640580-mRNA-1;Parent=Msa0640580;Name=Msa0640580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=190|1|1|1|1|1|8|279|538
chr4_3 exon 39652106 39652433 39652106 ID=Msa0640580-mRNA-1:exon:8877;Parent=Msa0640580-mRNA-1
chr4_3 exon 39652616 39652725 39652616 ID=Msa0640580-mRNA-1:exon:8878;Parent=Msa0640580-mRNA-1
chr4_3 exon 39653459 39653729 39653459 ID=Msa0640580-mRNA-1:exon:8879;Parent=Msa0640580-mRNA-1
chr4_3 exon 39653811 39653913 39653811 ID=Msa0640580-mRNA-1:exon:8880;Parent=Msa0640580-mRNA-1
chr4_3 exon 39654297 39654642 39654297 ID=Msa0640580-mRNA-1:exon:8881;Parent=Msa0640580-mRNA-1
chr4_3 exon 39655302 39655667 39655302 ID=Msa0640580-mRNA-1:exon:8882;Parent=Msa0640580-mRNA-1
chr4_3 exon 39655877 39655955 39655877 ID=Msa0640580-mRNA-1:exon:8883;Parent=Msa0640580-mRNA-1
chr4_3 exon 39656231 39656713 39656231 ID=Msa0640580-mRNA-1:exon:8884;Parent=Msa0640580-mRNA-1
chr4_3 five_prime_UTR 39652106 39652295 39652106 ID=Msa0640580-mRNA-1:five_prime_utr;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39652296 39652433 39652296 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39652616 39652725 39652616 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39653459 39653729 39653459 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39653811 39653913 39653811 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39654297 39654642 39654297 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39655302 39655667 39655302 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39655877 39655955 39655877 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 CDS 39656231 39656434 39656231 ID=Msa0640580-mRNA-1:cds;Parent=Msa0640580-mRNA-1
chr4_3 three_prime_UTR 39656435 39656713 39656435 ID=Msa0640580-mRNA-1:three_prime_utr;Parent=Msa0640580-mRNA-1
Gene Sequence

>Msa0640580

ATGGGTTACTTCAAACAATGTTGTGTCTTCTTGGTGCTAGTGTTACTTGTTGCATGTGCAAATGGAGAAGATCCTTACAGGTTTTATAATTGGAATGTTACATATGGAGATATTTATCCACTTGGAGTTAAACAACAGGGGATTTTGATAAATGGACAATTTCCAGGGCCACAGATTGAGTCAGTGACTAATGATAATTTGATTATCAATGTTTTTAATAGCTTGGATGAACCTTTCCTCATTTCTTGGAATGGAGTGCTGCAGAGGAGAAACTCATGGCAGGATGGAATGTATGGTACGAATTGTCCAATCTCTCCAGGACAGAACTTCACTTATATTCTTCAAGTAAAAGATCAGATTGGTAGCTATTTCTACTTTCCTTCCCTTGCATTCCACAAGGCAGCAGGAGGTTATGGCGGTTTCACAATCGCTAGTCGCTCTGTGATTCCTGTACCTTTTGATCCTCCATCCGGAGATTTCACCATATTGGCAGGAGATTGGTACAAAAGAAATCACACAGATTTGAGGGCCGTTTTAGATAGCGGAAGTGATCTTCCTTTCCCTGATGGACTTGTCATCAATGGCCGCGGTTCCAATGCTTACACATTCACTGTTGATCAAGGGAAGACTTACAGATTCCGGATATCAAATGTGGGGATTACCACATCCATCAATTTCAGAATCCAAGGGCATAAGATGAAGCTTGTTGAGGTGGAAGGAAGTCACACTTTGCAAAACACTTATGACTCACTTGACATTCATTTGGGGCAGACGTATTCTGTATTGGTTACTGCGGATCAACCACCAAATGACTACTACATTGTTGTCACAACAAGGTTCACGTCACAGGTGCTGAATGCTTCATCCATTCTTCATTACAGTAACTCTGCTGGAAGTGTTTCTGGTCCTCTTCCTGCTGGACCAACCACTGAAATCGATTGGTCCGTTGAACAAGCTCGCTCTCTAAGGAGGAATCTTACAGCAAGTGGACCAAGACCAAATCCACAAGGAACCTACCATTATGGAATGATAAACACAACTCGTACAATTAGACTTCACAATTCTGCTCCAATTATCAATGGAAAACAAAGATATGCTGTCAATAGTGTGTCATTCATCCCTGCTGATACACCACTCAAACTAGCTGATTACTTCAAGATCCAAGGGGTGTTTTCACTTGGAAGTATCCCGGACAACCCCACCGGTGGCGGCGGTTATCTTCAGACTTCTGTCATGGCGGCCGATTTTCGAGGTTTTGTGGAGGTTGTGTTTGAGAATCCTGAAGATACTTTGCAATCATGGCACATTGATGGACATAGCTTCTTTGTAGTAGGGATGGATGGAGGACAATGGTCAGCTGCAAGCAGACTAAATTACAACTTAAGAGATACAATTGCTCGTAGTACAGTTCAGGTGTATCCAAAGTCATGGACTGCACTGTACATGCCATTGGATAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCAAGACAGTACTTGGGCCACCAATTTTATCTTAGAGTGTATTCACCTGCAAATTCAGTGAGAGATGAGTACCCTATTCCAAGCAACGCACTTCAGTGTGGCAAGGCAGTGGGTCACCACAATTAG
Protein sequence

>Msa0640580

MGYFKQCCVFLVLVLLVACANGEDPYRFYNWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVLQRRNSWQDGMYGTNCPISPGQNFTYILQVKDQIGSYFYFPSLAFHKAAGGYGGFTIASRSVIPVPFDPPSGDFTILAGDWYKRNHTDLRAVLDSGSDLPFPDGLVINGRGSNAYTFTVDQGKTYRFRISNVGITTSINFRIQGHKMKLVEVEGSHTLQNTYDSLDIHLGQTYSVLVTADQPPNDYYIVVTTRFTSQVLNASSILHYSNSAGSVSGPLPAGPTTEIDWSVEQARSLRRNLTASGPRPNPQGTYHYGMINTTRTIRLHNSAPIINGKQRYAVNSVSFIPADTPLKLADYFKIQGVFSLGSIPDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTIARSTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSPANSVRDEYPIPSNALQCGKAVGHHN*