AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0618990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618990 MtrunA17_Chr8g0383631 99.754 812 2 0 1 812 1 812 0.0 1702
Msa0618990 MtrunA17_Chr3g0079701 93.620 815 38 2 1 812 1 804 0.0 1579
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618990 AT2G21790.1 84.191 816 125 1 1 812 1 816 0.0 1478

Find 245 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGTGCCTGATCTCTTTA+TGG 0.175397 4_2:-69966803 Msa0618990:CDS
TGCTGATATATTTGAGTTCT+TGG 0.186515 4_2:-69967005 Msa0618990:CDS
GACCTTTCTGCAGTTTCAAC+TGG 0.230257 4_2:+69965863 None:intergenic
ATGTTCATTCAATTACATTT+TGG 0.241206 4_2:-69964028 Msa0618990:three_prime_UTR
TCCCAGATCTATGATTAAAA+TGG 0.249718 4_2:+69967900 None:intergenic
GCAGTTGAGTAGTTGCTTCT+TGG 0.257108 4_2:-69967371 Msa0618990:intron
ATTGAAAATACCTTGCTTAC+AGG 0.257684 4_2:+69965550 None:intergenic
AAACTAGGGTTACGTAATTA+TGG 0.258873 4_2:+69968552 None:intergenic
TAAGCAGAAGAGACCTATTT+TGG 0.259584 4_2:+69964003 None:intergenic
TGTCAAGAGGCGGTTCATTT+TGG 0.263165 4_2:-69963815 Msa0618990:three_prime_UTR
GTGGGATTGGGGTGCACTTC+GGG 0.263837 4_2:-69965332 Msa0618990:CDS
ACCTGGTTTGGCAGATTGTT+GGG 0.280285 4_2:-69966731 Msa0618990:CDS
ATCCAATCAACAATCAAATA+TGG 0.286834 4_2:-69963839 Msa0618990:three_prime_UTR
ACCCATTGGTATTGGAGTTC+AGG 0.293692 4_2:-69965825 Msa0618990:CDS
TCCCTCCAATTTGTGGGATT+GGG 0.296736 4_2:-69965344 Msa0618990:CDS
CTCCCTCCAATTTGTGGGAT+TGG 0.303419 4_2:-69965345 Msa0618990:CDS
TCTTCACGATTTGACTGAAA+TGG 0.304516 4_2:-69965066 Msa0618990:CDS
GCAAAAGATATTGGTTGATA+TGG 0.309843 4_2:-69964851 Msa0618990:CDS
GGAGATCAAGCAAAAGATAT+TGG 0.313276 4_2:-69964860 Msa0618990:CDS
AATAATTATCAGAACTGTTT+GGG 0.316340 4_2:-69964881 Msa0618990:intron
ATTTGATTGTTGATTGGATT+TGG 0.318745 4_2:+69963843 None:intergenic
TCCCGCGAGAATGTGAAAAT+TGG 0.323833 4_2:+69968633 None:intergenic
GAAAAGCAACCAGCAGAATC+TGG 0.327390 4_2:-69966368 Msa0618990:CDS
TAATAATTATCAGAACTGTT+TGG 0.328369 4_2:-69964882 Msa0618990:intron
AAAATTACGGATGCATAATC+AGG 0.331516 4_2:+69968184 None:intergenic
ACTTTCTGAGCGACTAAAAC+AGG 0.342022 4_2:+69968292 None:intergenic
GTGCTTCATTGGGGCAGAAC+AGG 0.346214 4_2:+69966752 None:intergenic
CGGCACAGACCCATTGGTAT+TGG 0.349426 4_2:-69965833 Msa0618990:CDS
TGCACCCCAATCCCACAAAT+TGG 0.350482 4_2:+69965339 None:intergenic
GTTGAAAATTGAAGTGGAAA+TGG 0.358585 4_2:+69968659 None:intergenic
CACCTGGTTTGGCAGATTGT+TGG 0.366008 4_2:-69966732 Msa0618990:CDS
GCCAAACCAGGTGCTTCATT+GGG 0.366941 4_2:+69966742 None:intergenic
TTGAAGTCACAGATAGAAAC+TGG 0.367181 4_2:-69966522 Msa0618990:CDS
CTTCACGATTTGACTGAAAT+GGG 0.371085 4_2:-69965065 Msa0618990:CDS
ATCCATATTTGATTGTTGAT+TGG 0.373913 4_2:+69963837 None:intergenic
ACTACCGCTATAAGTTTCAT+AGG 0.377693 4_2:+69965573 None:intergenic
TGGAAAGAGTTCAGAGCAAC+GGG 0.378407 4_2:-69966783 Msa0618990:CDS
TGCCAAACCAGGTGCTTCAT+TGG 0.378584 4_2:+69966741 None:intergenic
GCATCTACCAGTCAAATTCT+TGG 0.379695 4_2:-69965253 Msa0618990:CDS
GTTCGATTGTGGATTGGATT+TGG 0.381117 4_2:+69968423 None:intergenic
AGTAAATCTGCAGGAGGAAT+TGG 0.384277 4_2:-69967286 Msa0618990:CDS
TATATGACTTTCAGTTCAAC+AGG 0.388870 4_2:+69964972 None:intergenic
TTGTAGATATTAGAAGTATA+TGG 0.388878 4_2:+69965211 None:intergenic
TCATCTGCCTCCTTCACCTT+AGG 0.389789 4_2:+69964431 None:intergenic
TGACGGCGATGGATTTAGTT+GGG 0.391194 4_2:+69968449 None:intergenic
CCCCAATGAAGCACCTGGTT+TGG 0.394351 4_2:-69966743 Msa0618990:CDS
TGCCATTCCTAGTAGTATAA+AGG 0.395597 4_2:+69965790 None:intergenic
TTCAAATGCCAATCCATACT+TGG 0.397895 4_2:-69964227 Msa0618990:three_prime_UTR
TTGAAAATTGAAGTGGAAAT+GGG 0.405385 4_2:+69968660 None:intergenic
GTGCCCATGGTAGTTACATT+CGG 0.409991 4_2:-69967243 Msa0618990:CDS
GATGGCGTCACTTGCAGCTC+GGG 0.410930 4_2:+69964581 None:intergenic
AGAGAGGTCTTATCTGTTGA+AGG 0.416190 4_2:-69967650 Msa0618990:CDS
CCCATTGGTATTGGAGTTCA+GGG 0.416868 4_2:-69965824 Msa0618990:CDS
TACTGCCCGTTATGTTGATC+AGG 0.419732 4_2:-69967167 Msa0618990:CDS
CTGACGGCGATGGATTTAGT+TGG 0.420058 4_2:+69968448 None:intergenic
GGAAGTAAGCTTTCCAAAGT+TGG 0.423469 4_2:+69964768 None:intergenic
AATGTAATTGAATGAACATT+GGG 0.427132 4_2:+69964032 None:intergenic
TCTTATCTGTTGAAGGTTCA+AGG 0.428310 4_2:-69967643 Msa0618990:CDS
TGTGACTCCCTCCAATTTGT+GGG 0.428684 4_2:-69965350 Msa0618990:CDS
GAAGTAAGCTTTCCAAAGTT+GGG 0.430569 4_2:+69964769 None:intergenic
ACCCACTCACGTTTCAGAAA+AGG 0.433865 4_2:+69968009 None:intergenic
AGATTGAAGATACTTGGTTA+TGG 0.435840 4_2:-69963779 Msa0618990:three_prime_UTR
TATTGGTTCAGTTGGCTGCT+AGG 0.436491 4_2:-69968069 Msa0618990:intron
GGAACAAATGGAACATCTAA+TGG 0.439356 4_2:-69967220 Msa0618990:CDS
TGCCCATGGTAGTTACATTC+GGG 0.439894 4_2:-69967242 Msa0618990:CDS
ATAGTGAGATAATCTATGAT+AGG 0.440293 4_2:-69967708 Msa0618990:CDS
GAAGTTAATTTCCCACGTTA+AGG 0.441872 4_2:+69963920 None:intergenic
CACATGGATAAACCCAACTT+TGG 0.442315 4_2:-69964781 Msa0618990:CDS
CATCTTGTTCGATTGTGGAT+TGG 0.442984 4_2:+69968417 None:intergenic
CGTCACTTGCAGCTCGGGTT+CGG 0.447339 4_2:+69964586 None:intergenic
TAGGTGTTCCAGCGTTGAAA+AGG 0.448993 4_2:+69967491 None:intergenic
CTCATCAGTCTAAGCTTGTT+GGG 0.451276 4_2:-69966117 Msa0618990:CDS
CATGCCTCCTTCATGCCAAC+AGG 0.452475 4_2:+69964306 None:intergenic
CGCTGGAACACCTAGGCCTC+AGG 0.452619 4_2:-69967482 Msa0618990:intron
CCCTCCAATTTGTGGGATTG+GGG 0.452935 4_2:-69965343 Msa0618990:CDS
TCTCATCAGTCTAAGCTTGT+TGG 0.453961 4_2:-69966118 Msa0618990:CDS
TGGTAGATGCAGTTGGCATA+GGG 0.460342 4_2:+69965266 None:intergenic
GAGTTCAGAGCAACGGGGAA+TGG 0.461034 4_2:-69966777 Msa0618990:CDS
TTGGAATTGAAAATAAATCA+TGG 0.462083 4_2:-69966986 Msa0618990:CDS
GTGTGACTCCCTCCAATTTG+TGG 0.463050 4_2:-69965351 Msa0618990:CDS
AGTTACATTCGGGGAACAAA+TGG 0.464068 4_2:-69967232 Msa0618990:CDS
GAAGATTTCCAAGTATGGAT+TGG 0.466250 4_2:+69964219 None:intergenic
GGTTCATTTCGACAAGATAA+CGG 0.466469 4_2:-69968362 Msa0618990:CDS
TACTATAGGATGCTTGCAAT+AGG 0.466750 4_2:-69966390 Msa0618990:intron
AAGTGGAAATGGGTATAAGA+TGG 0.469556 4_2:+69968670 None:intergenic
AGGGATTTATGATACATTGA+AGG 0.472331 4_2:-69967323 Msa0618990:CDS
ATAATCTTATTCTTAAGTGC+AGG 0.473123 4_2:+69965032 None:intergenic
GATTTAGAATGCGGCCCGAT+TGG 0.474630 4_2:-69967731 Msa0618990:intron
AAAATAGGTCTCTTCTGCTT+AGG 0.475829 4_2:-69964001 Msa0618990:three_prime_UTR
TCAACAGATAAGACCTCTCT+AGG 0.477274 4_2:+69967653 None:intergenic
AGATTATCTCACTATCCAAT+CGG 0.478302 4_2:+69967716 None:intergenic
TGTGGGATTGGGGTGCACTT+CGG 0.478406 4_2:-69965333 Msa0618990:CDS
ATGAAAGAGGATAGTATTGA+AGG 0.478961 4_2:-69967343 Msa0618990:CDS
TCCTCCCTGATCAACATAAC+GGG 0.482583 4_2:+69967162 None:intergenic
TGATGGCGTCACTTGCAGCT+CGG 0.483188 4_2:+69964580 None:intergenic
CTGGTAGATGCAGTTGGCAT+AGG 0.486502 4_2:+69965265 None:intergenic
TGTGAATTAGCTGCAAAAGA+AGG 0.487389 4_2:-69965598 Msa0618990:CDS
AAGTTCACTGTTGATACCTC+TGG 0.488511 4_2:-69964558 Msa0618990:CDS
ACGTACATCTTGTTCGATTG+TGG 0.489486 4_2:+69968412 None:intergenic
GACCTCAACATATGATAATG+AGG 0.490912 4_2:-69967606 Msa0618990:CDS
GCACACCATCTGTGCCATCT+TGG 0.493955 4_2:+69964394 None:intergenic
ACGGCAAGATTGAAGATACT+TGG 0.495268 4_2:-69963785 Msa0618990:three_prime_UTR
ATTTGCACCTGTTGGCATGA+AGG 0.497330 4_2:-69964313 Msa0618990:three_prime_UTR
AAAGGTGAGATTTGAAAACT+AGG 0.501762 4_2:+69968537 None:intergenic
GGTATCAACAGTGAACTTGA+TGG 0.502624 4_2:+69964563 None:intergenic
TTGCCGTGTACTTGGAGCCA+TGG 0.506004 4_2:-69967030 Msa0618990:CDS
GGGTATAAGATGGGTAGGGT+AGG 0.506091 4_2:+69968680 None:intergenic
CTACCGCTATAAGTTTCATA+GGG 0.506721 4_2:+69965574 None:intergenic
AAATGTAATTGAATGAACAT+TGG 0.507139 4_2:+69964031 None:intergenic
CCCTGAACTCCAATACCAAT+GGG 0.507374 4_2:+69965824 None:intergenic
GCTGATACCTTTATACTACT+AGG 0.508209 4_2:-69965797 Msa0618990:CDS
TAATTGTGCCCAGATTCTGC+TGG 0.508224 4_2:+69966359 None:intergenic
GGAGTCACACCCCACATGTC+AGG 0.510046 4_2:+69965364 None:intergenic
TTCTGCCCCAATGAAGCACC+TGG 0.511533 4_2:-69966748 Msa0618990:CDS
ATGATAATGAGGGTTTCTGT+TGG 0.513641 4_2:-69967595 Msa0618990:CDS
ATCATTTCATGTCTCAGAGA+TGG 0.514754 4_2:-69967534 Msa0618990:CDS
ACTCTTTCCATAAAGAGATC+AGG 0.516899 4_2:+69966796 None:intergenic
TTACACACAGCAGTTTCTGT+TGG 0.517348 4_2:+69966295 None:intergenic
CTTCTTGGTGTGTATGAAAG+AGG 0.518124 4_2:-69967356 Msa0618990:CDS
GAAATGGGTATAAGATGGGT+AGG 0.518135 4_2:+69968675 None:intergenic
ATCTCTTACATAACGCGGTA+GGG 0.523201 4_2:+69966258 None:intergenic
GTTGTATTTATAGTAGTGAA+AGG 0.525173 4_2:+69968519 None:intergenic
GTTATTGCCAAGAATTTGAC+TGG 0.525519 4_2:+69965246 None:intergenic
GGTGTAGTTTCAACTTCCAC+AGG 0.525819 4_2:+69964343 None:intergenic
CTCCTCCCTGATCAACATAA+CGG 0.526892 4_2:+69967161 None:intergenic
GATTATCTCACTATCCAATC+GGG 0.527787 4_2:+69967717 None:intergenic
CTTAGTAGATTTGCACCTGT+TGG 0.528081 4_2:-69964321 Msa0618990:three_prime_UTR
GGATTTGGTTCTGACGGCGA+TGG 0.529001 4_2:+69968438 None:intergenic
ACCTTTCTGCAGTTTCAACT+GGG 0.529840 4_2:+69965864 None:intergenic
GTTCCAGCGTTGAAAAGGGT+TGG 0.530421 4_2:+69967496 None:intergenic
CCTGGTTTGGCAGATTGTTG+GGG 0.532035 4_2:-69966730 Msa0618990:CDS
CAACAGGTGCAAATCTACTA+AGG 0.532721 4_2:+69964322 None:intergenic
TGGAAGGTTGAAAATTGAAG+TGG 0.535997 4_2:+69968653 None:intergenic
TGCAATTACTTTAATGCCAG+AGG 0.537941 4_2:+69964542 None:intergenic
AAAAGCAACCAGCAGAATCT+GGG 0.538023 4_2:-69966367 Msa0618990:CDS
AGTGGAAATGGGTATAAGAT+GGG 0.539385 4_2:+69968671 None:intergenic
TTTGAAAGGGTTTGAAGACT+GGG 0.543205 4_2:-69964620 Msa0618990:intron
TCTAAGCTTGTTGGGAGCAG+AGG 0.544709 4_2:-69966109 Msa0618990:CDS
TGAAAAGGGTTGGAGAAGCA+TGG 0.544864 4_2:+69967506 None:intergenic
GCTTTGTATAGAATTTACTC+TGG 0.545252 4_2:-69964173 Msa0618990:three_prime_UTR
AACTTGCGGCACAGACCCAT+TGG 0.547601 4_2:-69965839 Msa0618990:CDS
AAGGTGAGATTTGAAAACTA+GGG 0.548542 4_2:+69968538 None:intergenic
TAGTGAGATAATCTATGATA+GGG 0.549676 4_2:-69967707 Msa0618990:CDS
TGCATAATCAGGGTGGTTAG+CGG 0.550299 4_2:+69968195 None:intergenic
AGATTGAAGAAACTCAGTTA+CGG 0.550367 4_2:-69968337 Msa0618990:CDS
GGCTAATTCATCAAGTTGAC+TGG 0.551592 4_2:+69968240 None:intergenic
GCTGTTATTAGTAAATCTGC+AGG 0.553103 4_2:-69967295 Msa0618990:CDS
GAATAACGTACCTGAGGCCT+AGG 0.553399 4_2:+69967472 None:intergenic
TGTGTATGAAATTATCATCA+AGG 0.553565 4_2:-69967852 Msa0618990:intron
ACCGCGTTATGTAAGAGATA+AGG 0.553864 4_2:-69966254 Msa0618990:intron
AGGTGTTCCAGCGTTGAAAA+GGG 0.554477 4_2:+69967492 None:intergenic
CCCCAACAATCTGCCAAACC+AGG 0.559209 4_2:+69966730 None:intergenic
CACTTGCAGCTCGGGTTCGG+AGG 0.559794 4_2:+69964589 None:intergenic
TCCCCGAATGTAACTACCAT+GGG 0.561135 4_2:+69967240 None:intergenic
ATTTGACTGGTAGATGCAGT+TGG 0.562931 4_2:+69965259 None:intergenic
AAAGAGATCAGGCACCCAAA+GGG 0.564159 4_2:+69966807 None:intergenic
GATAATTTCATACACATCAT+CGG 0.564563 4_2:+69967859 None:intergenic
TGGATTGGATTTGGTTCTGA+CGG 0.564711 4_2:+69968432 None:intergenic
TGCTTCATTGGGGCAGAACA+GGG 0.566323 4_2:+69966753 None:intergenic
GACGGCGATGGATTTAGTTG+GGG 0.568603 4_2:+69968450 None:intergenic
GAAGGTTCAAGGAGTGGTTG+TGG 0.569042 4_2:-69967632 Msa0618990:CDS
TCTGTTGAAGGTTCAAGGAG+TGG 0.569467 4_2:-69967638 Msa0618990:CDS
CGTTATGTTGATCAGGGAGG+AGG 0.570595 4_2:-69967160 Msa0618990:CDS
TTGTTCAAGCACAGAGTCTG+TGG 0.573288 4_2:-69966554 Msa0618990:CDS
AATTCTTCAGCCTGACATGT+GGG 0.573350 4_2:-69965374 Msa0618990:CDS
TATCTCTTACATAACGCGGT+AGG 0.575221 4_2:+69966257 None:intergenic
TGAAAGAGGATAGTATTGAA+GGG 0.576753 4_2:-69967342 Msa0618990:CDS
ATGGAAAGAGTTCAGAGCAA+CGG 0.576870 4_2:-69966784 Msa0618990:CDS
GTTTGTGCCGGCGTTTACAA+AGG 0.577884 4_2:-69968271 Msa0618990:CDS
TCTTATATAGGGTTTACCTG+TGG 0.579223 4_2:-69966143 Msa0618990:intron
GTCGCTCAGAAAGTTTGTGC+CGG 0.580015 4_2:-69968283 Msa0618990:CDS
ACCCCAATCCCACAAATTGG+AGG 0.580755 4_2:+69965342 None:intergenic
CAGGGAGGAGGCAAGAGGAA+AGG 0.580785 4_2:-69967148 Msa0618990:intron
GGTGAAGGAGGCAGATGATG+AGG 0.581346 4_2:-69964426 Msa0618990:CDS
ATTGAAAATAAATCATGGAA+AGG 0.581359 4_2:-69966981 Msa0618990:intron
ACCCTGAACTCCAATACCAA+TGG 0.583702 4_2:+69965823 None:intergenic
AGGGTGGTTAGCGGTCATGC+CGG 0.585896 4_2:+69968204 None:intergenic
CGGGAGATGATATCAAAGAC+AGG 0.587167 4_2:-69965313 Msa0618990:CDS
ATGTACGTTGTGAAGAGAGA+TGG 0.587284 4_2:-69968397 Msa0618990:CDS
TCTACAATCGCAGAGTGCTA+AGG 0.589399 4_2:-69965195 Msa0618990:intron
TACCTTTATACTACTAGGAA+TGG 0.591337 4_2:-69965792 Msa0618990:CDS
TGCACCTGTTGGCATGAAGG+AGG 0.592841 4_2:-69964310 Msa0618990:three_prime_UTR
GTAGGATCAACCTAAGGTGA+AGG 0.596969 4_2:-69964441 Msa0618990:intron
GAAAAGGGTTGGAGAAGCAT+GGG 0.598289 4_2:+69967507 None:intergenic
AATAAGATTATCTATGACAA+CGG 0.602344 4_2:-69965020 Msa0618990:CDS
CATGCCGGCAGCAGTTTCAG+CGG 0.602689 4_2:+69968219 None:intergenic
CCCCAATCCCACAAATTGGA+GGG 0.603150 4_2:+69965343 None:intergenic
AAATGGGTATAAGATGGGTA+GGG 0.604206 4_2:+69968676 None:intergenic
ACCCTCATTATCATATGTTG+AGG 0.604412 4_2:+69967604 None:intergenic
TACACATCATCGGCAATCAA+CGG 0.608688 4_2:+69967869 None:intergenic
TAAAGAGATCAGGCACCCAA+AGG 0.610062 4_2:+69966806 None:intergenic
CAACAGATAAGACCTCTCTA+GGG 0.610108 4_2:+69967654 None:intergenic
TCATTGAACACACGCAGCAT+CGG 0.611592 4_2:+69967190 None:intergenic
GTTCACAACATACGTGCCCA+TGG 0.612170 4_2:-69967256 Msa0618990:CDS
GAATTCTTCAGCCTGACATG+TGG 0.613737 4_2:-69965375 Msa0618990:CDS
GGAGCAGAGGCTCTAGTAGT+CGG 0.613742 4_2:-69966096 Msa0618990:CDS
TAGCGGTAGTCCTGTAAGCA+AGG 0.613907 4_2:-69965560 Msa0618990:intron
ATGCCATGGCTCCAAGTACA+CGG 0.616372 4_2:+69967027 None:intergenic
ACCCAGTTGAAACTGCAGAA+AGG 0.616552 4_2:-69965865 Msa0618990:CDS
GGTTTCTGTTGGAATTCACA+AGG 0.619618 4_2:-69967584 Msa0618990:CDS
TTCCCCGAATGTAACTACCA+TGG 0.622260 4_2:+69967239 None:intergenic
ACTGCCCGTTATGTTGATCA+GGG 0.623349 4_2:-69967166 Msa0618990:CDS
ATTCTTCAGCCTGACATGTG+GGG 0.624402 4_2:-69965373 Msa0618990:CDS
TTAGACTGATGAGACTCCAC+AGG 0.628766 4_2:+69966127 None:intergenic
TTGGGTTCAAAACCCTAGAG+AGG 0.628996 4_2:-69967666 Msa0618990:CDS
GCGAGAATGTGAAAATTGGA+AGG 0.629011 4_2:+69968637 None:intergenic
ACCTCAACATATGATAATGA+GGG 0.634892 4_2:-69967605 Msa0618990:CDS
TTAGCCGCTGAAACTGCTGC+CGG 0.635948 4_2:-69968223 Msa0618990:CDS
CCAAACCAGGTGCTTCATTG+GGG 0.636999 4_2:+69966743 None:intergenic
AAATTACGGATGCATAATCA+GGG 0.637639 4_2:+69968185 None:intergenic
CTTTCTGAGCGACTAAAACA+GGG 0.637721 4_2:+69968293 None:intergenic
CTGCAGAAAGGTCAAACTTG+CGG 0.641053 4_2:-69965853 Msa0618990:CDS
AATCAAATATGGATGTCAAG+AGG 0.641382 4_2:-69963828 Msa0618990:three_prime_UTR
GAAGAGAGATGGTCGTCAAG+AGG 0.642493 4_2:-69968386 Msa0618990:CDS
GGATCAACCTAAGGTGAAGG+AGG 0.643379 4_2:-69964438 Msa0618990:CDS
GGTAGATGCAGTTGGCATAG+GGG 0.644273 4_2:+69965267 None:intergenic
TAAGATGGGTAGGGTAGGTG+AGG 0.647304 4_2:+69968685 None:intergenic
TGATACCAAGATGGCACAGA+TGG 0.648530 4_2:-69964399 Msa0618990:CDS
AGCATAGGCAAACCTTAACG+TGG 0.650290 4_2:-69963932 Msa0618990:three_prime_UTR
TCAAATATATCAGCATGCCA+TGG 0.653122 4_2:+69967013 None:intergenic
GTTATTAGTAAATCTGCAGG+AGG 0.654429 4_2:-69967292 Msa0618990:CDS
TTGATCAGGGAGGAGGCAAG+AGG 0.655422 4_2:-69967153 Msa0618990:CDS
GAGAGATGGTCGTCAAGAGG+CGG 0.656772 4_2:-69968383 Msa0618990:CDS
GTTGATATGGCTGTTGATCG+AGG 0.657853 4_2:-69964838 Msa0618990:CDS
GACAAACAGAGACGAGTGTG+AGG 0.658465 4_2:-69964366 Msa0618990:CDS
GCGGTAGGGCAATTGATGCA+AGG 0.660696 4_2:+69966272 None:intergenic
TAATTCATCAAGTTGACTGG+TGG 0.662193 4_2:+69968243 None:intergenic
AGAGACGAGTGTGAGGCCTG+TGG 0.669541 4_2:-69964359 Msa0618990:CDS
CAAATATGGATGTCAAGAGG+CGG 0.674810 4_2:-69963825 Msa0618990:three_prime_UTR
AATGGCATTTGATTCACCAG+AGG 0.676603 4_2:-69965774 Msa0618990:intron
TGAGGATGATGATACCAAGA+TGG 0.681385 4_2:-69964408 Msa0618990:CDS
ACCTTATCTCTTACATAACG+CGG 0.684486 4_2:+69966253 None:intergenic
TCAAAGTTTAAATATACACA+TGG 0.684728 4_2:-69964797 Msa0618990:CDS
GTGAATGTAGGATCAACCTA+AGG 0.689066 4_2:-69964447 Msa0618990:intron
GCATAGGCAAACCTTAACGT+GGG 0.692303 4_2:-69963931 Msa0618990:three_prime_UTR
GGTAACGCCTTTGTAAACGC+CGG 0.692435 4_2:+69968264 None:intergenic
CTAATGACAGGTTACTGCTG+TGG 0.697818 4_2:-69965927 Msa0618990:intron
GCAGGCTCAACAGTTAAACA+AGG 0.698840 4_2:-69965662 Msa0618990:intron
GCCCATGGTAGTTACATTCG+GGG 0.698966 4_2:-69967241 Msa0618990:CDS
GCCCGTTATGTTGATCAGGG+AGG 0.705919 4_2:-69967163 Msa0618990:CDS
GGCCCCTATGAAACTTATAG+CGG 0.706024 4_2:-69965577 Msa0618990:CDS
ATTTGACTGAAATGGGACTG+TGG 0.706027 4_2:-69965058 Msa0618990:CDS
TACCGCTATAAGTTTCATAG+GGG 0.734200 4_2:+69965575 None:intergenic
TTACGGATGCATAATCAGGG+TGG 0.757818 4_2:+69968188 None:intergenic
GGAAAGAGTTCAGAGCAACG+GGG 0.791990 4_2:-69966782 Msa0618990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTGTTATTATACTAT+AGG - chr4_2:69966039-69966058 Msa0618990:intron 10.0%
!! TAAATAATGTTTATGTTTAT+GGG - chr4_2:69966692-69966711 Msa0618990:CDS 10.0%
!!! AATTGTTTAAGATTTGAAAT+GGG - chr4_2:69964628-69964647 Msa0618990:intron 15.0%
!!! TGAAATTCATTTTTTGATTT+TGG - chr4_2:69964683-69964702 Msa0618990:intron 15.0%
!!! GAAATTCATTTTTTGATTTT+GGG - chr4_2:69964684-69964703 Msa0618990:intron 15.0%
!! AAACTTGTATAAAGTTAAAA+AGG + chr4_2:69965991-69966010 None:intergenic 15.0%
!! TATACAAGTTAAGAATTAAA+AGG + chr4_2:69966019-69966038 None:intergenic 15.0%
!!! TTTTTATTTGCTTCTTATAT+AGG - chr4_2:69966288-69966307 Msa0618990:CDS 15.0%
!!! TTTTATTTGCTTCTTATATA+GGG - chr4_2:69966289-69966308 Msa0618990:CDS 15.0%
!!! ATCAATTATTTTATTAAGGT+TGG + chr4_2:69966548-69966567 None:intergenic 15.0%
!!! TGACATCAATTATTTTATTA+AGG + chr4_2:69966552-69966571 None:intergenic 15.0%
!! GTAAATAATGTTTATGTTTA+TGG - chr4_2:69966691-69966710 Msa0618990:CDS 15.0%
!! AAATAATGTTTATGTTTATG+GGG - chr4_2:69966693-69966712 Msa0618990:CDS 15.0%
!! AACAACAAAAAATTCATCAT+CGG + chr4_2:69964330-69964349 None:intergenic 20.0%
!!! TGAATTGTTTTCGATTTTAT+TGG - chr4_2:69964357-69964376 Msa0618990:CDS 20.0%
!!! GATTTTTTTTTTCAGTGTTA+AGG - chr4_2:69964510-69964529 Msa0618990:intron 20.0%
!!! CAATTGTTTAAGATTTGAAA+TGG - chr4_2:69964627-69964646 Msa0618990:intron 20.0%
!!! ATTTTGACTATGATTACTTT+GGG - chr4_2:69964759-69964778 Msa0618990:CDS 20.0%
!!! TGTGAATTTTGAATCTTATT+TGG - chr4_2:69965027-69965046 Msa0618990:CDS 20.0%
!! TTGGAATTGAAAATAAATCA+TGG - chr4_2:69965457-69965476 Msa0618990:intron 20.0%
!! ATTGAAAATAAATCATGGAA+AGG - chr4_2:69965462-69965481 Msa0618990:intron 20.0%
!! TAAAATAGACAAATTTCAAC+TGG + chr4_2:69965553-69965572 None:intergenic 20.0%
!! GCAAATAAAAATTCAAAATC+AGG + chr4_2:69966279-69966298 None:intergenic 20.0%
!!! TATTTTGACTTTGAAAAACT+GGG - chr4_2:69966370-69966389 Msa0618990:CDS 20.0%
!! AAAAATAACTATTACACAAG+TGG + chr4_2:69966491-69966510 None:intergenic 20.0%
!!! TATTTTTTGTAACTAATGAC+AGG - chr4_2:69966504-69966523 Msa0618990:CDS 20.0%
!!! TTGTAGATATTAGAAGTATA+TGG + chr4_2:69967235-69967254 None:intergenic 20.0%
!! AATAAGATTATCTATGACAA+CGG - chr4_2:69967423-69967442 Msa0618990:intron 20.0%
!!! AGTTCTGATAATTATTAAGA+GGG + chr4_2:69967558-69967577 None:intergenic 20.0%
!! TAATAATTATCAGAACTGTT+TGG - chr4_2:69967561-69967580 Msa0618990:CDS 20.0%
!! AATAATTATCAGAACTGTTT+GGG - chr4_2:69967562-69967581 Msa0618990:CDS 20.0%
!! TCAAAGTTTAAATATACACA+TGG - chr4_2:69967646-69967665 Msa0618990:CDS 20.0%
!! AATGTAATTGAATGAACATT+GGG + chr4_2:69968414-69968433 None:intergenic 20.0%
!! AAATGTAATTGAATGAACAT+TGG + chr4_2:69968415-69968434 None:intergenic 20.0%
!!! ATGTTCATTCAATTACATTT+TGG - chr4_2:69968415-69968434 Msa0618990:exon 20.0%
!!! ATTACAACTTAAAAAAGCAT+AGG - chr4_2:69968496-69968515 Msa0618990:five_prime_UTR 20.0%
! TTGAAAATTGAAGTGGAAAT+GGG + chr4_2:69963786-69963805 None:intergenic 25.0%
! GTTGTATTTATAGTAGTGAA+AGG + chr4_2:69963927-69963946 None:intergenic 25.0%
!!! AACCATTTTAATCATAGATC+TGG - chr4_2:69964541-69964560 Msa0618990:intron 25.0%
!!! ACCATTTTAATCATAGATCT+GGG - chr4_2:69964542-69964561 Msa0618990:intron 25.0%
! GATAATTTCATACACATCAT+CGG + chr4_2:69964587-69964606 None:intergenic 25.0%
! TGTGTATGAAATTATCATCA+AGG - chr4_2:69964591-69964610 Msa0618990:CDS 25.0%
!!! AAGATTTGAAATGGGTTTTT+AGG - chr4_2:69964636-69964655 Msa0618990:intron 25.0%
! ATAGTGAGATAATCTATGAT+AGG - chr4_2:69964735-69964754 Msa0618990:intron 25.0%
! TAGTGAGATAATCTATGATA+GGG - chr4_2:69964736-69964755 Msa0618990:intron 25.0%
!!! GATTTTGACTATGATTACTT+TGG - chr4_2:69964758-69964777 Msa0618990:CDS 25.0%
!!! AAACCATTTTGTGATTTGTT+TGG - chr4_2:69965319-69965338 Msa0618990:CDS 25.0%
! ATTCCAAACAAATCACAAAA+TGG + chr4_2:69965325-69965344 None:intergenic 25.0%
!! TTATTTTCTATCAAATCCAC+AGG - chr4_2:69965851-69965870 Msa0618990:CDS 25.0%
!! TATTTTCTATCAAATCCACA+GGG - chr4_2:69965852-69965871 Msa0618990:CDS 25.0%
!!! AAATCCTTACATGCTTTTTA+AGG - chr4_2:69965944-69965963 Msa0618990:intron 25.0%
!!! GTATTTTGACTTTGAAAAAC+TGG - chr4_2:69966369-69966388 Msa0618990:CDS 25.0%
!!! CTTTTTAACTACAACTGATA+CGG - chr4_2:69966405-69966424 Msa0618990:intron 25.0%
!!! TTTTTAACTACAACTGATAC+GGG - chr4_2:69966406-69966425 Msa0618990:intron 25.0%
! ACATAAACATTATTTACCTC+TGG + chr4_2:69966688-69966707 None:intergenic 25.0%
!! TTTGATAGTTTACTTGGATA+TGG - chr4_2:69966755-69966774 Msa0618990:CDS 25.0%
! TTAAATATACATGTGCAACT+GGG + chr4_2:69966960-69966979 None:intergenic 25.0%
! ATAATCTTATTCTTAAGTGC+AGG + chr4_2:69967414-69967433 None:intergenic 25.0%
!! CAGTTCTGATAATTATTAAG+AGG + chr4_2:69967559-69967578 None:intergenic 25.0%
! TCTCTTACTAAATCTATTGA+TGG - chr4_2:69967768-69967787 Msa0618990:intron 25.0%
! CTCTTACTAAATCTATTGAT+GGG - chr4_2:69967769-69967788 Msa0618990:intron 25.0%
! TCTTACTAAATCTATTGATG+GGG - chr4_2:69967770-69967789 Msa0618990:intron 25.0%
!!! TGTTTTTTTGTTGTGAATGT+AGG - chr4_2:69967984-69968003 Msa0618990:intron 25.0%
!!! ATTTTGAAGATTTCCAAGTA+TGG + chr4_2:69968232-69968251 None:intergenic 25.0%
!!! TTACATTTTGGTACCAAAAT+AGG - chr4_2:69968427-69968446 Msa0618990:five_prime_UTR 25.0%
!! ATTTGATTGTTGATTGGATT+TGG + chr4_2:69968603-69968622 None:intergenic 25.0%
! ATCCAATCAACAATCAAATA+TGG - chr4_2:69968604-69968623 Msa0618990:five_prime_UTR 25.0%
! ATCCATATTTGATTGTTGAT+TGG + chr4_2:69968609-69968628 None:intergenic 25.0%
GTTGAAAATTGAAGTGGAAA+TGG + chr4_2:69963787-69963806 None:intergenic 30.0%
AAACTAGGGTTACGTAATTA+TGG + chr4_2:69963894-69963913 None:intergenic 30.0%
AAGGTGAGATTTGAAAACTA+GGG + chr4_2:69963908-69963927 None:intergenic 30.0%
AAAGGTGAGATTTGAAAACT+AGG + chr4_2:69963909-69963928 None:intergenic 30.0%
AGATTGAAGAAACTCAGTTA+CGG - chr4_2:69964106-69964125 Msa0618990:three_prime_UTR 30.0%
AAATTACGGATGCATAATCA+GGG + chr4_2:69964261-69964280 None:intergenic 30.0%
AAAATTACGGATGCATAATC+AGG + chr4_2:69964262-69964281 None:intergenic 30.0%
AAAAAAAGGCGGGAAAATTA+CGG + chr4_2:69964275-69964294 None:intergenic 30.0%
AGGAAAACTAAAAAAAAGGC+GGG + chr4_2:69964285-69964304 None:intergenic 30.0%
GAGGAAAACTAAAAAAAAGG+CGG + chr4_2:69964286-69964305 None:intergenic 30.0%
GCAGAGGAAAACTAAAAAAA+AGG + chr4_2:69964289-69964308 None:intergenic 30.0%
!!! TTCGATTTTATTGGTTCAGT+TGG - chr4_2:69964366-69964385 Msa0618990:CDS 30.0%
TCCCAGATCTATGATTAAAA+TGG + chr4_2:69964546-69964565 None:intergenic 30.0%
!!! TGAAATGGGTTTTTAGGTTT+TGG - chr4_2:69964642-69964661 Msa0618990:intron 30.0%
!!! TGGGTTTTTGATTTAGAATG+CGG - chr4_2:69964703-69964722 Msa0618990:intron 30.0%
AGATTATCTCACTATCCAAT+CGG + chr4_2:69964730-69964749 None:intergenic 30.0%
! ACCTCAACATATGATAATGA+GGG - chr4_2:69964838-69964857 Msa0618990:CDS 30.0%
! ATGAAAGAGGATAGTATTGA+AGG - chr4_2:69965100-69965119 Msa0618990:intron 30.0%
! TGAAAGAGGATAGTATTGAA+GGG - chr4_2:69965101-69965120 Msa0618990:intron 30.0%
AGGGATTTATGATACATTGA+AGG - chr4_2:69965120-69965139 Msa0618990:intron 30.0%
AACAAGTGTTCATCTAATTG+AGG + chr4_2:69965349-69965368 None:intergenic 30.0%
! TGCTGATATATTTGAGTTCT+TGG - chr4_2:69965438-69965457 Msa0618990:intron 30.0%
!!! AGATTTATTTTACGCCCTTT+GGG - chr4_2:69965622-69965641 Msa0618990:CDS 30.0%
GTATGAAAAAGCAGTAAGTT+TGG - chr4_2:69965763-69965782 Msa0618990:intron 30.0%
!! CTGGTTGTTTTGTATATTTC+CGG - chr4_2:69965797-69965816 Msa0618990:CDS 30.0%
!! TTGTTTTGTATATTTCCGGA+AGG - chr4_2:69965801-69965820 Msa0618990:CDS 30.0%
TGACAGAAATCAAACAAACT+CGG + chr4_2:69966246-69966265 None:intergenic 30.0%
!! TTTTAACTACAACTGATACG+GGG - chr4_2:69966407-69966426 Msa0618990:intron 30.0%
TACCTTTATACTACTAGGAA+TGG - chr4_2:69966651-69966670 Msa0618990:intron 30.0%
! CTCTGATTTGATAGTTTACT+TGG - chr4_2:69966749-69966768 Msa0618990:CDS 30.0%
ATTGAAAATACCTTGCTTAC+AGG + chr4_2:69966896-69966915 None:intergenic 30.0%
GTTAAATATACATGTGCAAC+TGG + chr4_2:69966961-69966980 None:intergenic 30.0%
CAACATATAATGACATGGTA+TGG + chr4_2:69967281-69967300 None:intergenic 30.0%
CATACCATGTCATTATATGT+TGG - chr4_2:69967279-69967298 Msa0618990:CDS 30.0%
GATACCAACATATAATGACA+TGG + chr4_2:69967286-69967305 None:intergenic 30.0%
TGAAAGACAAACAGTTAACA+AGG + chr4_2:69967326-69967345 None:intergenic 30.0%
TATATGACTTTCAGTTCAAC+AGG + chr4_2:69967474-69967493 None:intergenic 30.0%
! GCAAAAGATATTGGTTGATA+TGG - chr4_2:69967592-69967611 Msa0618990:CDS 30.0%
AACAAAACAGAGAGTGATAT+TGG + chr4_2:69967804-69967823 None:intergenic 30.0%
!!! ACTCTCTGTTTTGTTTTGAA+AGG - chr4_2:69967809-69967828 Msa0618990:intron 30.0%
!!! CTCTCTGTTTTGTTTTGAAA+GGG - chr4_2:69967810-69967829 Msa0618990:intron 30.0%
GCTTTGTATAGAATTTACTC+TGG - chr4_2:69968270-69968289 Msa0618990:CDS 30.0%
AATCAAATATGGATGTCAAG+AGG - chr4_2:69968615-69968634 Msa0618990:five_prime_UTR 30.0%
AGATTGAAGATACTTGGTTA+TGG - chr4_2:69968664-69968683 Msa0618990:five_prime_UTR 30.0%
AAATGGGTATAAGATGGGTA+GGG + chr4_2:69963770-69963789 None:intergenic 35.0%
AGTGGAAATGGGTATAAGAT+GGG + chr4_2:69963775-69963794 None:intergenic 35.0%
AAGTGGAAATGGGTATAAGA+TGG + chr4_2:69963776-69963795 None:intergenic 35.0%
TGGAAGGTTGAAAATTGAAG+TGG + chr4_2:69963793-69963812 None:intergenic 35.0%
! TTCCAATTTTCACATTCTCG+CGG - chr4_2:69963808-69963827 Msa0618990:three_prime_UTR 35.0%
! AAAACCCCACTCTTTTTAGA+GGG - chr4_2:69963847-69963866 Msa0618990:three_prime_UTR 35.0%
! GGAATTTTATCGAACGGTTT+TGG + chr4_2:69963975-69963994 None:intergenic 35.0%
! AGTTGGGGAATTTTATCGAA+CGG + chr4_2:69963981-69964000 None:intergenic 35.0%
GGTTCATTTCGACAAGATAA+CGG - chr4_2:69964081-69964100 Msa0618990:three_prime_UTR 35.0%
!! TAATTCATCAAGTTGACTGG+TGG + chr4_2:69964203-69964222 None:intergenic 35.0%
AAGATAACGTTATGAAGCAG+AGG + chr4_2:69964305-69964324 None:intergenic 35.0%
GATTATCTCACTATCCAATC+GGG + chr4_2:69964729-69964748 None:intergenic 35.0%
TCTTATCTGTTGAAGGTTCA+AGG - chr4_2:69964800-69964819 Msa0618990:CDS 35.0%
! GACCTCAACATATGATAATG+AGG - chr4_2:69964837-69964856 Msa0618990:CDS 35.0%
ACCCTCATTATCATATGTTG+AGG + chr4_2:69964842-69964861 None:intergenic 35.0%
! ATGATAATGAGGGTTTCTGT+TGG - chr4_2:69964848-69964867 Msa0618990:CDS 35.0%
ATCATTTCATGTCTCAGAGA+TGG - chr4_2:69964909-69964928 Msa0618990:intron 35.0%
GCTGTTATTAGTAAATCTGC+AGG - chr4_2:69965148-69965167 Msa0618990:intron 35.0%
GTTATTAGTAAATCTGCAGG+AGG - chr4_2:69965151-69965170 Msa0618990:intron 35.0%
GGAACAAATGGAACATCTAA+TGG - chr4_2:69965223-69965242 Msa0618990:CDS 35.0%
GTGTGTTATGTGATTGTTGT+AGG - chr4_2:69965385-69965404 Msa0618990:intron 35.0%
TCAAATATATCAGCATGCCA+TGG + chr4_2:69965433-69965452 None:intergenic 35.0%
! AATCATGGAAAGGTATGAAG+TGG - chr4_2:69965472-69965491 Msa0618990:intron 35.0%
CTGGCATATACTAAGATCTA+GGG + chr4_2:69965534-69965553 None:intergenic 35.0%
ACTGGCATATACTAAGATCT+AGG + chr4_2:69965535-69965554 None:intergenic 35.0%
!!! GAGATTTATTTTACGCCCTT+TGG - chr4_2:69965621-69965640 Msa0618990:CDS 35.0%
ACTCTTTCCATAAAGAGATC+AGG + chr4_2:69965650-69965669 None:intergenic 35.0%
CGGAAATATACAAAACAACC+AGG + chr4_2:69965799-69965818 None:intergenic 35.0%
!!! ATCTTTTTTGCTTTTCCCTG+TGG + chr4_2:69965870-69965889 None:intergenic 35.0%
TTGAAGTCACAGATAGAAAC+TGG - chr4_2:69965921-69965940 Msa0618990:intron 35.0%
!! TCCTTACATGCTTTTTAAGG+TGG - chr4_2:69965947-69965966 Msa0618990:intron 35.0%
! ACCACCTTAAAAAGCATGTA+AGG + chr4_2:69965951-69965970 None:intergenic 35.0%
TACTATAGGATGCTTGCAAT+AGG - chr4_2:69966053-69966072 Msa0618990:intron 35.0%
ACCTTATCTCTTACATAACG+CGG + chr4_2:69966193-69966212 None:intergenic 35.0%
GACAGAAATCAAACAAACTC+GGG + chr4_2:69966245-69966264 None:intergenic 35.0%
TCTTATATAGGGTTTACCTG+TGG - chr4_2:69966300-69966319 Msa0618990:CDS 35.0%
! GGTCATATAGTGATAGTGTA+AGG + chr4_2:69966470-69966489 None:intergenic 35.0%
GCTGATACCTTTATACTACT+AGG - chr4_2:69966646-69966665 Msa0618990:intron 35.0%
TGCCATTCCTAGTAGTATAA+AGG + chr4_2:69966656-69966675 None:intergenic 35.0%
TGTGAATTAGCTGCAAAAGA+AGG - chr4_2:69966845-69966864 Msa0618990:intron 35.0%
TACCGCTATAAGTTTCATAG+GGG + chr4_2:69966871-69966890 None:intergenic 35.0%
CTACCGCTATAAGTTTCATA+GGG + chr4_2:69966872-69966891 None:intergenic 35.0%
ACTACCGCTATAAGTTTCAT+AGG + chr4_2:69966873-69966892 None:intergenic 35.0%
!! AGCAAGGTATTTTCAATCAG+TGG - chr4_2:69966899-69966918 Msa0618990:intron 35.0%
CTTTCCTTACCCTTCTATTA+TGG - chr4_2:69966927-69966946 Msa0618990:intron 35.0%
CTAAAGATCCAAGATGTTTG+TGG - chr4_2:69967016-69967035 Msa0618990:CDS 35.0%
AGGTGATTATCTATATGTGC+AGG - chr4_2:69967045-69967064 Msa0618990:intron 35.0%
GGTGATTATCTATATGTGCA+GGG - chr4_2:69967046-69967065 Msa0618990:intron 35.0%
GTTATTGCCAAGAATTTGAC+TGG + chr4_2:69967200-69967219 None:intergenic 35.0%
GTTAACTGTTTGTCTTTCAG+TGG - chr4_2:69967327-69967346 Msa0618990:CDS 35.0%
TCTTCACGATTTGACTGAAA+TGG - chr4_2:69967377-69967396 Msa0618990:intron 35.0%
CTTCACGATTTGACTGAAAT+GGG - chr4_2:69967378-69967397 Msa0618990:intron 35.0%
ATTAGAGTCAAGTTTGTGTC+AGG + chr4_2:69967522-69967541 None:intergenic 35.0%
GGAGATCAAGCAAAAGATAT+TGG - chr4_2:69967583-69967602 Msa0618990:CDS 35.0%
GAAGTAAGCTTTCCAAAGTT+GGG + chr4_2:69967677-69967696 None:intergenic 35.0%
! CTTCCTTGCATTTTTATGCT+TGG - chr4_2:69967693-69967712 Msa0618990:CDS 35.0%
TGACCAAGCATAAAAATGCA+AGG + chr4_2:69967699-69967718 None:intergenic 35.0%
! GCATTTTTATGCTTGGTCAA+AGG - chr4_2:69967700-69967719 Msa0618990:CDS 35.0%
!! TTTTGAAAGGGTTTGAAGAC+TGG - chr4_2:69967822-69967841 Msa0618990:intron 35.0%
TTTGAAAGGGTTTGAAGACT+GGG - chr4_2:69967823-69967842 Msa0618990:intron 35.0%
TGCAATTACTTTAATGCCAG+AGG + chr4_2:69967904-69967923 None:intergenic 35.0%
CAAACGACAAATCACATGAA+CGG + chr4_2:69967947-69967966 None:intergenic 35.0%
TTCAAATGCCAATCCATACT+TGG - chr4_2:69968216-69968235 Msa0618990:CDS 35.0%
GAAGATTTCCAAGTATGGAT+TGG + chr4_2:69968227-69968246 None:intergenic 35.0%
! TTGTTGTATTGCGTGCTTTT+AGG - chr4_2:69968329-69968348 Msa0618990:CDS 35.0%
! TAAGCAGAAGAGACCTATTT+TGG + chr4_2:69968443-69968462 None:intergenic 35.0%
AAAATAGGTCTCTTCTGCTT+AGG - chr4_2:69968442-69968461 Msa0618990:five_prime_UTR 35.0%
GAAGTTAATTTCCCACGTTA+AGG + chr4_2:69968526-69968545 None:intergenic 35.0%
!! GGTTCATTTTGGCAAGATAA+CGG - chr4_2:69968639-69968658 Msa0618990:five_prime_UTR 35.0%
GAAATGGGTATAAGATGGGT+AGG + chr4_2:69963771-69963790 None:intergenic 40.0%
GCGAGAATGTGAAAATTGGA+AGG + chr4_2:69963809-69963828 None:intergenic 40.0%
! TCCAATTTTCACATTCTCGC+GGG - chr4_2:69963809-69963828 Msa0618990:three_prime_UTR 40.0%
! CAAAACCCCACTCTTTTTAG+AGG - chr4_2:69963846-69963865 Msa0618990:three_prime_UTR 40.0%
! AGTTCCCTCTAAAAAGAGTG+GGG + chr4_2:69963854-69963873 None:intergenic 40.0%
! GAGTTCCCTCTAAAAAGAGT+GGG + chr4_2:69963855-69963874 None:intergenic 40.0%
! TGAGTTCCCTCTAAAAAGAG+TGG + chr4_2:69963856-69963875 None:intergenic 40.0%
!! TGGATTGGATTTGGTTCTGA+CGG + chr4_2:69964014-69964033 None:intergenic 40.0%
!! GTTCGATTGTGGATTGGATT+TGG + chr4_2:69964023-69964042 None:intergenic 40.0%
CATCTTGTTCGATTGTGGAT+TGG + chr4_2:69964029-69964048 None:intergenic 40.0%
ACGTACATCTTGTTCGATTG+TGG + chr4_2:69964034-69964053 None:intergenic 40.0%
ATGTACGTTGTGAAGAGAGA+TGG - chr4_2:69964046-69964065 Msa0618990:three_prime_UTR 40.0%
CTTTCTGAGCGACTAAAACA+GGG + chr4_2:69964153-69964172 None:intergenic 40.0%
ACTTTCTGAGCGACTAAAAC+AGG + chr4_2:69964154-69964173 None:intergenic 40.0%
!! GGCTAATTCATCAAGTTGAC+TGG + chr4_2:69964206-69964225 None:intergenic 40.0%
!!! ATCCTTTTCTGAAACGTGAG+TGG - chr4_2:69964432-69964451 Msa0618990:CDS 40.0%
!!! TCCTTTTCTGAAACGTGAGT+GGG - chr4_2:69964433-69964452 Msa0618990:CDS 40.0%
TACACATCATCGGCAATCAA+CGG + chr4_2:69964577-69964596 None:intergenic 40.0%
CAACAGATAAGACCTCTCTA+GGG + chr4_2:69964792-69964811 None:intergenic 40.0%
TCAACAGATAAGACCTCTCT+AGG + chr4_2:69964793-69964812 None:intergenic 40.0%
! AGAGAGGTCTTATCTGTTGA+AGG - chr4_2:69964793-69964812 Msa0618990:CDS 40.0%
GGTTTCTGTTGGAATTCACA+AGG - chr4_2:69964859-69964878 Msa0618990:CDS 40.0%
! CTTCTTGGTGTGTATGAAAG+AGG - chr4_2:69965087-69965106 Msa0618990:CDS 40.0%
AGTAAATCTGCAGGAGGAAT+TGG - chr4_2:69965157-69965176 Msa0618990:intron 40.0%
AGTTACATTCGGGGAACAAA+TGG - chr4_2:69965211-69965230 Msa0618990:CDS 40.0%
CCTACATAGGTAACACATCA+AGG + chr4_2:69965586-69965605 None:intergenic 40.0%
CCTTGATGTGTTACCTATGT+AGG - chr4_2:69965583-69965602 Msa0618990:CDS 40.0%
ATGGAAAGAGTTCAGAGCAA+CGG - chr4_2:69965659-69965678 Msa0618990:CDS 40.0%
!! AAGTTTGGTCTTGATAAGCC+TGG - chr4_2:69965778-69965797 Msa0618990:CDS 40.0%
CAGTAAAAGAGACATCCTTC+CGG + chr4_2:69965819-69965838 None:intergenic 40.0%
AAAAGCAACCAGCAGAATCT+GGG - chr4_2:69966076-69966095 Msa0618990:CDS 40.0%
TTACACACAGCAGTTTCTGT+TGG + chr4_2:69966151-69966170 None:intergenic 40.0%
ATCTCTTACATAACGCGGTA+GGG + chr4_2:69966188-69966207 None:intergenic 40.0%
TATCTCTTACATAACGCGGT+AGG + chr4_2:69966189-69966208 None:intergenic 40.0%
ACCGCGTTATGTAAGAGATA+AGG - chr4_2:69966189-69966208 Msa0618990:intron 40.0%
CCTAACACAAAAAATGCCAG+AGG + chr4_2:69966222-69966241 None:intergenic 40.0%
!!! CCTCTGGCATTTTTTGTGTT+AGG - chr4_2:69966219-69966238 Msa0618990:intron 40.0%
TCTCATCAGTCTAAGCTTGT+TGG - chr4_2:69966325-69966344 Msa0618990:CDS 40.0%
! CTCATCAGTCTAAGCTTGTT+GGG - chr4_2:69966326-69966345 Msa0618990:CDS 40.0%
! TGACTTTGAAAAACTGGGAG+AGG - chr4_2:69966375-69966394 Msa0618990:CDS 40.0%
ACCTTTCTGCAGTTTCAACT+GGG + chr4_2:69966582-69966601 None:intergenic 40.0%
AATGGCATTTGATTCACCAG+AGG - chr4_2:69966669-69966688 Msa0618990:intron 40.0%
TTTACTTGGATATGGTGTGC+AGG - chr4_2:69966763-69966782 Msa0618990:CDS 40.0%
! CACAAGAAGTTTTCAGAGCA+TGG + chr4_2:69966829-69966848 None:intergenic 40.0%
TCCTTACCCTTCTATTATGG+TGG - chr4_2:69966930-69966949 Msa0618990:intron 40.0%
ACCACCATAATAGAAGGGTA+AGG + chr4_2:69966934-69966953 None:intergenic 40.0%
GGACTACCACCATAATAGAA+GGG + chr4_2:69966939-69966958 None:intergenic 40.0%
CTAAGCAACCACAAACATCT+TGG + chr4_2:69967027-69967046 None:intergenic 40.0%
CAAGATGTTTGTGGTTGCTT+AGG - chr4_2:69967025-69967044 Msa0618990:CDS 40.0%
AATTCTTCAGCCTGACATGT+GGG - chr4_2:69967069-69967088 Msa0618990:intron 40.0%
ATTTGACTGGTAGATGCAGT+TGG + chr4_2:69967187-69967206 None:intergenic 40.0%
GCATCTACCAGTCAAATTCT+TGG - chr4_2:69967190-69967209 Msa0618990:CDS 40.0%
ATTTGACTGAAATGGGACTG+TGG - chr4_2:69967385-69967404 Msa0618990:intron 40.0%
CACATGGATAAACCCAACTT+TGG - chr4_2:69967662-69967681 Msa0618990:CDS 40.0%
GGAAGTAAGCTTTCCAAAGT+TGG + chr4_2:69967678-69967697 None:intergenic 40.0%
GGTATCAACAGTGAACTTGA+TGG + chr4_2:69967883-69967902 None:intergenic 40.0%
AAGTTCACTGTTGATACCTC+TGG - chr4_2:69967885-69967904 Msa0618990:CDS 40.0%
GTGAATGTAGGATCAACCTA+AGG - chr4_2:69967996-69968015 Msa0618990:intron 40.0%
TGAGGATGATGATACCAAGA+TGG - chr4_2:69968035-69968054 Msa0618990:CDS 40.0%
CAACAGGTGCAAATCTACTA+AGG + chr4_2:69968124-69968143 None:intergenic 40.0%
CTTAGTAGATTTGCACCTGT+TGG - chr4_2:69968122-69968141 Msa0618990:intron 40.0%
CAAATATGGATGTCAAGAGG+CGG - chr4_2:69968618-69968637 Msa0618990:five_prime_UTR 40.0%
ACGGCAAGATTGAAGATACT+TGG - chr4_2:69968658-69968677 Msa0618990:five_prime_UTR 40.0%
TCCCGCGAGAATGTGAAAAT+TGG + chr4_2:69963813-69963832 None:intergenic 45.0%
! TGACGGCGATGGATTTAGTT+GGG + chr4_2:69963997-69964016 None:intergenic 45.0%
TGCATAATCAGGGTGGTTAG+CGG + chr4_2:69964251-69964270 None:intergenic 45.0%
TTACGGATGCATAATCAGGG+TGG + chr4_2:69964258-69964277 None:intergenic 45.0%
!! TATTGGTTCAGTTGGCTGCT+AGG - chr4_2:69964374-69964393 Msa0618990:CDS 45.0%
ACCCACTCACGTTTCAGAAA+AGG + chr4_2:69964437-69964456 None:intergenic 45.0%
TTGGGTTCAAAACCCTAGAG+AGG - chr4_2:69964777-69964796 Msa0618990:CDS 45.0%
TCTGTTGAAGGTTCAAGGAG+TGG - chr4_2:69964805-69964824 Msa0618990:CDS 45.0%
! GAAAAGGGTTGGAGAAGCAT+GGG + chr4_2:69964939-69964958 None:intergenic 45.0%
TGAAAAGGGTTGGAGAAGCA+TGG + chr4_2:69964940-69964959 None:intergenic 45.0%
! AGGTGTTCCAGCGTTGAAAA+GGG + chr4_2:69964954-69964973 None:intergenic 45.0%
! TAGGTGTTCCAGCGTTGAAA+AGG + chr4_2:69964955-69964974 None:intergenic 45.0%
! TTTTCAACGCTGGAACACCT+AGG - chr4_2:69964954-69964973 Msa0618990:intron 45.0%
GCACATGAATAACGTACCTG+AGG + chr4_2:69964980-69964999 None:intergenic 45.0%
GCAGTTGAGTAGTTGCTTCT+TGG - chr4_2:69965072-69965091 Msa0618990:CDS 45.0%
GTGCCCATGGTAGTTACATT+CGG - chr4_2:69965200-69965219 Msa0618990:CDS 45.0%
TGCCCATGGTAGTTACATTC+GGG - chr4_2:69965201-69965220 Msa0618990:CDS 45.0%
TCCCCGAATGTAACTACCAT+GGG + chr4_2:69965206-69965225 None:intergenic 45.0%
TTCCCCGAATGTAACTACCA+TGG + chr4_2:69965207-69965226 None:intergenic 45.0%
TCATTGAACACACGCAGCAT+CGG + chr4_2:69965256-69965275 None:intergenic 45.0%
TACTGCCCGTTATGTTGATC+AGG - chr4_2:69965276-69965295 Msa0618990:CDS 45.0%
ACTGCCCGTTATGTTGATCA+GGG - chr4_2:69965277-69965296 Msa0618990:CDS 45.0%
TCCTCCCTGATCAACATAAC+GGG + chr4_2:69965284-69965303 None:intergenic 45.0%
CTCCTCCCTGATCAACATAA+CGG + chr4_2:69965285-69965304 None:intergenic 45.0%
GCACGTTGTTCTTCCTACAT+AGG + chr4_2:69965599-69965618 None:intergenic 45.0%
AAAGAGATCAGGCACCCAAA+GGG + chr4_2:69965639-69965658 None:intergenic 45.0%
TAAAGAGATCAGGCACCCAA+AGG + chr4_2:69965640-69965659 None:intergenic 45.0%
TTGGGTGCCTGATCTCTTTA+TGG - chr4_2:69965640-69965659 Msa0618990:CDS 45.0%
TGGAAAGAGTTCAGAGCAAC+GGG - chr4_2:69965660-69965679 Msa0618990:CDS 45.0%
!! ACCTGGTTTGGCAGATTGTT+GGG - chr4_2:69965712-69965731 Msa0618990:intron 45.0%
TTGTTCAAGCACAGAGTCTG+TGG - chr4_2:69965889-69965908 Msa0618990:CDS 45.0%
GAAAAGCAACCAGCAGAATC+TGG - chr4_2:69966075-69966094 Msa0618990:CDS 45.0%
TAATTGTGCCCAGATTCTGC+TGG + chr4_2:69966087-69966106 None:intergenic 45.0%
GAGATAAGGTATGACACCTC+TGG - chr4_2:69966203-69966222 Msa0618990:intron 45.0%
TTAGACTGATGAGACTCCAC+AGG + chr4_2:69966319-69966338 None:intergenic 45.0%
CTAATGACAGGTTACTGCTG+TGG - chr4_2:69966516-69966535 Msa0618990:CDS 45.0%
ACCCAGTTGAAACTGCAGAA+AGG - chr4_2:69966578-69966597 Msa0618990:intron 45.0%
GACCTTTCTGCAGTTTCAAC+TGG + chr4_2:69966583-69966602 None:intergenic 45.0%
CTGCAGAAAGGTCAAACTTG+CGG - chr4_2:69966590-69966609 Msa0618990:intron 45.0%
! ACCCATTGGTATTGGAGTTC+AGG - chr4_2:69966618-69966637 Msa0618990:intron 45.0%
CCCTGAACTCCAATACCAAT+GGG + chr4_2:69966622-69966641 None:intergenic 45.0%
! CCCATTGGTATTGGAGTTCA+GGG - chr4_2:69966619-69966638 Msa0618990:intron 45.0%
ACCCTGAACTCCAATACCAA+TGG + chr4_2:69966623-69966642 None:intergenic 45.0%
GCAGGCTCAACAGTTAAACA+AGG - chr4_2:69966781-69966800 Msa0618990:CDS 45.0%
GGCCCCTATGAAACTTATAG+CGG - chr4_2:69966866-69966885 Msa0618990:intron 45.0%
GGGACTACCACCATAATAGA+AGG + chr4_2:69966940-69966959 None:intergenic 45.0%
GAATTCTTCAGCCTGACATG+TGG - chr4_2:69967068-69967087 Msa0618990:intron 45.0%
ATTCTTCAGCCTGACATGTG+GGG - chr4_2:69967070-69967089 Msa0618990:intron 45.0%
TGTGACTCCCTCCAATTTGT+GGG - chr4_2:69967093-69967112 Msa0618990:intron 45.0%
TCCCTCCAATTTGTGGGATT+GGG - chr4_2:69967099-69967118 Msa0618990:intron 45.0%
CGGGAGATGATATCAAAGAC+AGG - chr4_2:69967130-69967149 Msa0618990:intron 45.0%
TGGTAGATGCAGTTGGCATA+GGG + chr4_2:69967180-69967199 None:intergenic 45.0%
! TCTACAATCGCAGAGTGCTA+AGG - chr4_2:69967248-69967267 Msa0618990:CDS 45.0%
GTTGATATGGCTGTTGATCG+AGG - chr4_2:69967605-69967624 Msa0618990:CDS 45.0%
GTAGGATCAACCTAAGGTGA+AGG - chr4_2:69968002-69968021 Msa0618990:intron 45.0%
TGATACCAAGATGGCACAGA+TGG - chr4_2:69968044-69968063 Msa0618990:CDS 45.0%
GGTGTAGTTTCAACTTCCAC+AGG + chr4_2:69968103-69968122 None:intergenic 45.0%
ATTTGCACCTGTTGGCATGA+AGG - chr4_2:69968130-69968149 Msa0618990:intron 45.0%
AGCATAGGCAAACCTTAACG+TGG - chr4_2:69968511-69968530 Msa0618990:five_prime_UTR 45.0%
GCATAGGCAAACCTTAACGT+GGG - chr4_2:69968512-69968531 Msa0618990:five_prime_UTR 45.0%
! TGTCAAGAGGCGGTTCATTT+TGG - chr4_2:69968628-69968647 Msa0618990:five_prime_UTR 45.0%
TAAGATGGGTAGGGTAGGTG+AGG + chr4_2:69963761-69963780 None:intergenic 50.0%
GGGTATAAGATGGGTAGGGT+AGG + chr4_2:69963766-69963785 None:intergenic 50.0%
!! ACGGTTTTGGCGCAAGAGTT+AGG + chr4_2:69963962-69963981 None:intergenic 50.0%
! GACGGCGATGGATTTAGTTG+GGG + chr4_2:69963996-69964015 None:intergenic 50.0%
! CTGACGGCGATGGATTTAGT+TGG + chr4_2:69963998-69964017 None:intergenic 50.0%
GAAGAGAGATGGTCGTCAAG+AGG - chr4_2:69964057-69964076 Msa0618990:three_prime_UTR 50.0%
GTCGCTCAGAAAGTTTGTGC+CGG - chr4_2:69964160-69964179 Msa0618990:three_prime_UTR 50.0%
! GTTTGTGCCGGCGTTTACAA+AGG - chr4_2:69964172-69964191 Msa0618990:three_prime_UTR 50.0%
GGTAACGCCTTTGTAAACGC+CGG + chr4_2:69964182-69964201 None:intergenic 50.0%
! GATTTAGAATGCGGCCCGAT+TGG - chr4_2:69964712-69964731 Msa0618990:intron 50.0%
GAAGGTTCAAGGAGTGGTTG+TGG - chr4_2:69964811-69964830 Msa0618990:CDS 50.0%
! TCTCCAACCCTTTTCAACGC+TGG - chr4_2:69964944-69964963 Msa0618990:intron 50.0%
! GTTCCAGCGTTGAAAAGGGT+TGG + chr4_2:69964950-69964969 None:intergenic 50.0%
GAATAACGTACCTGAGGCCT+AGG + chr4_2:69964974-69964993 None:intergenic 50.0%
GTTCACAACATACGTGCCCA+TGG - chr4_2:69965187-69965206 Msa0618990:intron 50.0%
GCCCATGGTAGTTACATTCG+GGG - chr4_2:69965202-69965221 Msa0618990:CDS 50.0%
CGTTATGTTGATCAGGGAGG+AGG - chr4_2:69965283-69965302 Msa0618990:CDS 50.0%
! AGGAGCTTTTGCCGTGTACT+TGG - chr4_2:69965405-69965424 Msa0618990:intron 50.0%
ATGCCATGGCTCCAAGTACA+CGG + chr4_2:69965419-69965438 None:intergenic 50.0%
GGAAAGAGTTCAGAGCAACG+GGG - chr4_2:69965661-69965680 Msa0618990:CDS 50.0%
TGCTTCATTGGGGCAGAACA+GGG + chr4_2:69965693-69965712 None:intergenic 50.0%
CCAAACCAGGTGCTTCATTG+GGG + chr4_2:69965703-69965722 None:intergenic 50.0%
GCCAAACCAGGTGCTTCATT+GGG + chr4_2:69965704-69965723 None:intergenic 50.0%
TGCCAAACCAGGTGCTTCAT+TGG + chr4_2:69965705-69965724 None:intergenic 50.0%
!! CACCTGGTTTGGCAGATTGT+TGG - chr4_2:69965711-69965730 Msa0618990:intron 50.0%
!! CCTGGTTTGGCAGATTGTTG+GGG - chr4_2:69965713-69965732 Msa0618990:intron 50.0%
!! TCTAAGCTTGTTGGGAGCAG+AGG - chr4_2:69966334-69966353 Msa0618990:CDS 50.0%
TAGCGGTAGTCCTGTAAGCA+AGG - chr4_2:69966883-69966902 Msa0618990:intron 50.0%
GTGTGACTCCCTCCAATTTG+TGG - chr4_2:69967092-69967111 Msa0618990:intron 50.0%
CTCCCTCCAATTTGTGGGAT+TGG - chr4_2:69967098-69967117 Msa0618990:intron 50.0%
CCCCAATCCCACAAATTGGA+GGG + chr4_2:69967103-69967122 None:intergenic 50.0%
CCCTCCAATTTGTGGGATTG+GGG - chr4_2:69967100-69967119 Msa0618990:intron 50.0%
ACCCCAATCCCACAAATTGG+AGG + chr4_2:69967104-69967123 None:intergenic 50.0%
TGCACCCCAATCCCACAAAT+TGG + chr4_2:69967107-69967126 None:intergenic 50.0%
GGTAGATGCAGTTGGCATAG+GGG + chr4_2:69967179-69967198 None:intergenic 50.0%
CTGGTAGATGCAGTTGGCAT+AGG + chr4_2:69967181-69967200 None:intergenic 50.0%
GGATCAACCTAAGGTGAAGG+AGG - chr4_2:69968005-69968024 Msa0618990:intron 50.0%
TCATCTGCCTCCTTCACCTT+AGG + chr4_2:69968015-69968034 None:intergenic 50.0%
GACAAACAGAGACGAGTGTG+AGG - chr4_2:69968077-69968096 Msa0618990:intron 50.0%
!! GGATTTGGTTCTGACGGCGA+TGG + chr4_2:69964008-69964027 None:intergenic 55.0%
GAGAGATGGTCGTCAAGAGG+CGG - chr4_2:69964060-69964079 Msa0618990:three_prime_UTR 55.0%
TTAGCCGCTGAAACTGCTGC+CGG - chr4_2:69964220-69964239 Msa0618990:three_prime_UTR 55.0%
GCCCGTTATGTTGATCAGGG+AGG - chr4_2:69965280-69965299 Msa0618990:CDS 55.0%
TTGATCAGGGAGGAGGCAAG+AGG - chr4_2:69965290-69965309 Msa0618990:CDS 55.0%
TTGCCGTGTACTTGGAGCCA+TGG - chr4_2:69965413-69965432 Msa0618990:intron 55.0%
GAGTTCAGAGCAACGGGGAA+TGG - chr4_2:69965666-69965685 Msa0618990:intron 55.0%
GTGCTTCATTGGGGCAGAAC+AGG + chr4_2:69965694-69965713 None:intergenic 55.0%
! TTCTGCCCCAATGAAGCACC+TGG - chr4_2:69965695-69965714 Msa0618990:intron 55.0%
! CCCCAATGAAGCACCTGGTT+TGG - chr4_2:69965700-69965719 Msa0618990:intron 55.0%
CCCCAACAATCTGCCAAACC+AGG + chr4_2:69965716-69965735 None:intergenic 55.0%
GCGGTAGGGCAATTGATGCA+AGG + chr4_2:69966174-69966193 None:intergenic 55.0%
! GGAGCAGAGGCTCTAGTAGT+CGG - chr4_2:69966347-69966366 Msa0618990:CDS 55.0%
AACTTGCGGCACAGACCCAT+TGG - chr4_2:69966604-69966623 Msa0618990:intron 55.0%
CGGCACAGACCCATTGGTAT+TGG - chr4_2:69966610-69966629 Msa0618990:intron 55.0%
TGTGGGATTGGGGTGCACTT+CGG - chr4_2:69967110-69967129 Msa0618990:intron 55.0%
! TGATGGCGTCACTTGCAGCT+CGG + chr4_2:69967866-69967885 None:intergenic 55.0%
GGTGAAGGAGGCAGATGATG+AGG - chr4_2:69968017-69968036 Msa0618990:intron 55.0%
GCACACCATCTGTGCCATCT+TGG + chr4_2:69968052-69968071 None:intergenic 55.0%
TGCACCTGTTGGCATGAAGG+AGG - chr4_2:69968133-69968152 Msa0618990:intron 55.0%
CATGCCTCCTTCATGCCAAC+AGG + chr4_2:69968140-69968159 None:intergenic 55.0%
CATGCCGGCAGCAGTTTCAG+CGG + chr4_2:69964227-69964246 None:intergenic 60.0%
AGGGTGGTTAGCGGTCATGC+CGG + chr4_2:69964242-69964261 None:intergenic 60.0%
CAGGGAGGAGGCAAGAGGAA+AGG - chr4_2:69965295-69965314 Msa0618990:CDS 60.0%
GGAGTCACACCCCACATGTC+AGG + chr4_2:69967082-69967101 None:intergenic 60.0%
GTGGGATTGGGGTGCACTTC+GGG - chr4_2:69967111-69967130 Msa0618990:intron 60.0%
CGTCACTTGCAGCTCGGGTT+CGG + chr4_2:69967860-69967879 None:intergenic 60.0%
GATGGCGTCACTTGCAGCTC+GGG + chr4_2:69967865-69967884 None:intergenic 60.0%
AGAGACGAGTGTGAGGCCTG+TGG - chr4_2:69968084-69968103 Msa0618990:intron 60.0%
CGCTGGAACACCTAGGCCTC+AGG - chr4_2:69964961-69964980 Msa0618990:intron 65.0%
CACTTGCAGCTCGGGTTCGG+AGG + chr4_2:69967857-69967876 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 69963753 69968712 69963753 ID=Msa0618990;Name=Msa0618990
chr4_2 mRNA 69963753 69968712 69963753 ID=Msa0618990-mRNA-1;Parent=Msa0618990;Name=Msa0618990-mRNA-1;_AED=0.18;_eAED=0.18;_QI=293|1|1|1|1|1|17|599|812
chr4_2 exon 69963753 69964459 69963753 ID=Msa0618990-mRNA-1:exon:20337;Parent=Msa0618990-mRNA-1
chr4_2 exon 69964551 69964634 69964551 ID=Msa0618990-mRNA-1:exon:20336;Parent=Msa0618990-mRNA-1
chr4_2 exon 69964744 69964891 69964744 ID=Msa0618990-mRNA-1:exon:20335;Parent=Msa0618990-mRNA-1
chr4_2 exon 69964969 69965118 69964969 ID=Msa0618990-mRNA-1:exon:20334;Parent=Msa0618990-mRNA-1
chr4_2 exon 69965196 69965398 69965196 ID=Msa0618990-mRNA-1:exon:20333;Parent=Msa0618990-mRNA-1
chr4_2 exon 69965561 69965680 69965561 ID=Msa0618990-mRNA-1:exon:20332;Parent=Msa0618990-mRNA-1
chr4_2 exon 69965775 69965939 69965775 ID=Msa0618990-mRNA-1:exon:20331;Parent=Msa0618990-mRNA-1
chr4_2 exon 69966069 69966155 69966069 ID=Msa0618990-mRNA-1:exon:20330;Parent=Msa0618990-mRNA-1
chr4_2 exon 69966255 69966404 69966255 ID=Msa0618990-mRNA-1:exon:20329;Parent=Msa0618990-mRNA-1
chr4_2 exon 69966500 69966592 69966500 ID=Msa0618990-mRNA-1:exon:20328;Parent=Msa0618990-mRNA-1
chr4_2 exon 69966690 69966860 69966690 ID=Msa0618990-mRNA-1:exon:20327;Parent=Msa0618990-mRNA-1
chr4_2 exon 69966982 69967058 69966982 ID=Msa0618990-mRNA-1:exon:20326;Parent=Msa0618990-mRNA-1
chr4_2 exon 69967149 69967389 69967149 ID=Msa0618990-mRNA-1:exon:20325;Parent=Msa0618990-mRNA-1
chr4_2 exon 69967483 69967746 69967483 ID=Msa0618990-mRNA-1:exon:20324;Parent=Msa0618990-mRNA-1
chr4_2 exon 69967853 69967940 69967853 ID=Msa0618990-mRNA-1:exon:20323;Parent=Msa0618990-mRNA-1
chr4_2 exon 69968019 69968080 69968019 ID=Msa0618990-mRNA-1:exon:20322;Parent=Msa0618990-mRNA-1
chr4_2 exon 69968192 69968712 69968192 ID=Msa0618990-mRNA-1:exon:20321;Parent=Msa0618990-mRNA-1
chr4_2 five_prime_UTR 69968420 69968712 69968420 ID=Msa0618990-mRNA-1:five_prime_utr;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69968192 69968419 69968192 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69968019 69968080 69968019 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69967853 69967940 69967853 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69967483 69967746 69967483 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69967149 69967389 69967149 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69966982 69967058 69966982 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69966690 69966860 69966690 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69966500 69966592 69966500 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69966255 69966404 69966255 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69966069 69966155 69966069 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69965775 69965939 69965775 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69965561 69965680 69965561 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69965196 69965398 69965196 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69964969 69965118 69964969 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69964744 69964891 69964744 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69964551 69964634 69964551 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 CDS 69964352 69964459 69964352 ID=Msa0618990-mRNA-1:cds;Parent=Msa0618990-mRNA-1
chr4_2 three_prime_UTR 69963753 69964351 69963753 ID=Msa0618990-mRNA-1:three_prime_utr;Parent=Msa0618990-mRNA-1
Gene Sequence

>Msa0618990

ATGTACGTTGTGAAGAGAGATGGTCGTCAAGAGGCGGTTCATTTCGACAAGATAACGGCGAGATTGAAGAAACTCAGTTACGGTTTAAGCACTGAACACTGTGACCCTGTTTTAGTCGCTCAGAAAGTTTGTGCCGGCGTTTACAAAGGCGTTACCACCAGTCAACTTGATGAATTAGCCGCTGAAACTGCTGCCGGCATGACCGCTAACCACCCTGATTATGCATCCTTGGCTGCTAGGATTGCTGTTTCAAATCTGCACAAGAACACACTGAAATCCTTTTCTGAAACTGTTAAGGTTATGTACAACCATTTTAATCATAGATCTGGGAAGAAAGCTCCGTTGATTGCCGATGATGTGTATGAAATTATCATCAAGAATGCGGCCCGATTGGATAGTGAGATAATCTATGATAGGGATTTTGACTATGATTACTTTGGGTTCAAAACCCTAGAGAGGTCTTATCTGTTGAAGGTTCAAGGAGTGGTTGTGGAAAGACCTCAACATATGATAATGAGGGTTTCTGTTGGAATTCACAAGGATGATGTTGAATCTGCTGTCAAAACTTATCATTTCATGTCTCAGAGATGGTTTACCCATGCTTCTCCAACCCTTTTCAACGCTGGAACACCTAGGCCTCAGTTGAGTAGTTGCTTCTTGGTGTGTATGAAAGAGGATAGTATTGAAGGGATTTATGATACATTGAAGGAGTGTGCTGTTATTAGTAAATCTGCAGGAGGAATTGGTGTTTCTGTTCACAACATACGTGCCCATGGTAGTTACATTCGGGGAACAAATGGAACATCTAATGGTATTGTTCCGATGCTGCGTGTGTTCAATGATACTGCCCGTTATGTTGATCAGGGAGGAGGCAAGAGGAAAGGAGCTTTTGCCGTGTACTTGGAGCCATGGCATGCTGATATATTTGAGTTCTTGGAATTGAAAATAAATCATGGAAAGGAAGAACAACGTGCTCGAGATTTATTTTACGCCCTTTGGGTGCCTGATCTCTTTATGGAAAGAGTTCAGAGCAACGGGGAATGGTCCCTGTTCTGCCCCAATGAAGCACCTGGTTTGGCAGATTGTTGGGGTGAAGAATATGATAAGTTGTACACTCAGTATGAAAAAGCAGGAAAAGCAAAAAAGATTGTTCAAGCACAGAGTCTGTGGTTTGCAATTTTGAAGTCACAGATAGAAACTGGAAATCCTTACATGCTTTTTAAGGATGCTTGCAATAGGAAAAGCAACCAGCAGAATCTGGGCACAATTAAGTCATCAAATCTGTGCACTGAGATAATCGAGTATACAAGTCCAACAGAAACTGCTGTGTGTAACCTTGCATCAATTGCCCTACCGCGTTATGTAAGAGATAAGGGTTTACCTGTGGAGTCTCATCAGTCTAAGCTTGTTGGGAGCAGAGGCTCTAGTAGTCGGTATTTTGACTTTGAAAAACTGGGAGAGGTTACTGCTGTGGTGACAACCAACCTTAATAAAATAATTGATGTCAACTACTACCCAGTTGAAACTGCAGAAAGGTCAAACTTGCGGCACAGACCCATTGGTATTGGAGTTCAGGGTCTTGCTGATACCTTTATACTACTAGGAATGGCATTTGATTCACCAGAGGCTCAACAGTTAAACAAGGATATTTTTGAGACTATATACTACCATGCTCTGAAAACTTCTTGTGAATTAGCTGCAAAAGAAGGCCCCTATGAAACTTATAGCGGTAGTCCTGTAAGCAAGGGAATTCTTCAGCCTGACATGTGGGGTGTGACTCCCTCCAATTTGTGGGATTGGGGTGCACTTCGGGAGATGATATCAAAGACAGGTGTACGAAATTCACTTCTTGTTGCCCCTATGCCAACTGCATCTACCAGTCAAATTCTTGGCAATAACGAGTGTTTTGAACCATATACTTCTAATATCTACAATCGCAGAGTGCTAAGTGGTGAGTTCGTTGTAGTGAACAAGCATCTTCTTCACGATTTGACTGAAATGGGACTGTGGAATCCTGCACTTAAGAATAAGATTATCTATGACAACGGTTCAGTACAGAATCTGTCAGAAATACCTGTTGAACTGAAAGTCATATACAAAACTGTTTGGGAGATCAAGCAAAAGATATTGGTTGATATGGCTGTTGATCGAGGATGTTACATAGATCAGAGTCAAAGTTTAAATATACACATGGATAAACCCAACTTTGGAAAGCTTACTTCCTTGCATTTTTATGCTTGGTCAAAGGGTTTGAAGACTGGGATGTACTACCTCCGAACCCGAGCTGCAAGTGACGCCATCAAGTTCACTGTTGATACCTCTGGCATTAAAGATCAACCTAAGGTGAAGGAGGCAGATGATGAGGATGATGATACCAAGATGGCACAGATGGTGTGCTCTTTGACAAACAGAGACGAGTGTGAGGCCTGTGGAAGTTGA
Protein sequence

>Msa0618990

MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDVYEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHKDDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAVISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLADCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYFDFEKLGEVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVTPSNLWDWGALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPVELKVIYKTVWEIKQKILVDMAVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDTSGIKDQPKVKEADDEDDDTKMAQMVCSLTNRDECEACGS*