AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861440 MtrunA17_Chr5g0441371 96.927 423 11 1 85 507 1 421 0.0 845
Msa0861440 MtrunA17_Chr7g0255771 52.597 462 169 12 85 503 1 455 7.81e-152 441
Msa0861440 MtrunA17_Chr5g0406741 45.652 276 147 3 229 503 150 423 2.88e-76 246
Msa0861440 MtrunA17_Chr8g0370671 38.338 373 207 7 129 500 74 424 8.03e-76 245
Msa0861440 MtrunA17_Chr3g0103471 45.200 250 129 3 244 488 15 261 1.25e-63 208
Msa0861440 MtrunA17_Chr8g0357001 45.089 224 120 3 239 461 474 695 2.93e-63 219
Msa0861440 MtrunA17_Chr3g0102621 44.048 252 133 3 249 495 26 274 7.59e-63 206
Msa0861440 MtrunA17_Chr3g0102851 43.200 250 134 3 244 488 25 271 2.46e-61 202
Msa0861440 MtrunA17_Chr3g0125051 43.726 263 137 7 232 486 222 481 2.23e-60 206
Msa0861440 MtrunA17_Chr3g0102861 44.898 245 127 4 249 488 20 261 2.79e-60 199
Msa0861440 MtrunA17_Chr1g0148681 40.959 271 151 6 236 499 142 410 3.01e-57 196
Msa0861440 MtrunA17_Chr3g0138431 40.590 271 152 6 236 499 199 467 3.07e-56 195
Msa0861440 MtrunA17_Chr6g0462981 45.817 251 120 6 250 495 45 284 1.44e-54 186
Msa0861440 MtrunA17_Chr6g0462911 44.980 249 123 5 250 495 45 282 1.57e-54 186
Msa0861440 MtrunA17_Chr2g0332181 40.441 272 153 6 234 498 151 420 7.15e-53 184
Msa0861440 MtrunA17_Chr2g0332171 42.553 235 126 6 234 461 205 437 1.63e-52 185
Msa0861440 MtrunA17_Chr3g0125041 41.525 236 127 7 236 463 229 461 1.14e-51 183
Msa0861440 MtrunA17_Chr3g0102631 46.766 201 102 2 300 495 1 201 4.68e-49 167
Msa0861440 MtrunA17_Chr3g0102651 46.766 201 102 2 300 495 1 201 4.68e-49 167
Msa0861440 MtrunA17_Chr3g0102661 46.766 201 102 2 300 495 1 201 4.68e-49 167
Msa0861440 MtrunA17_Chr3g0102671 46.766 201 102 2 300 495 1 201 4.68e-49 167
Msa0861440 MtrunA17_Chr1g0152871 38.431 255 145 6 242 486 83 335 5.51e-49 172
Msa0861440 MtrunA17_Chr3g0134411 35.433 254 154 4 242 486 82 334 8.97e-45 161
Msa0861440 MtrunA17_Chr3g0134401 35.391 243 149 5 251 486 74 315 5.68e-43 155
Msa0861440 MtrunA17_Chr3g0134421 36.614 254 149 5 243 486 76 327 6.11e-42 153
Msa0861440 MtrunA17_Chr3g0134441 39.908 218 124 4 270 481 86 302 6.37e-41 150
Msa0861440 MtrunA17_Chr5g0418901 72.152 79 22 0 306 384 9 87 6.19e-36 128
Msa0861440 MtrunA17_Chr5g0398791 39.181 171 101 1 250 417 2 172 1.00e-31 120
Msa0861440 MtrunA17_Chr3g0134431 33.898 236 135 5 255 486 13 231 1.24e-31 122
Msa0861440 MtrunA17_Chr2g0277271 50.000 56 28 0 287 342 33 88 7.93e-15 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861440 AT5G06150.1 52.500 440 184 9 85 505 1 434 2.12e-140 412
Msa0861440 AT2G26760.1 50.831 421 168 7 85 504 1 383 2.24e-136 399
Msa0861440 AT3G11520.1 50.342 439 176 12 85 507 1 413 2.49e-131 387
Msa0861440 AT4G37490.1 50.231 432 190 9 85 503 2 421 7.87e-124 369
Msa0861440 AT3G11520.2 51.269 394 146 15 85 460 1 366 1.38e-113 341
Msa0861440 AT5G06150.2 50.595 336 142 8 85 401 1 331 4.16e-90 279
Msa0861440 AT1G20610.1 41.618 346 189 5 164 503 90 428 3.85e-81 259
Msa0861440 AT1G76310.1 45.818 275 145 4 231 503 157 429 6.33e-76 246
Msa0861440 AT1G16330.1 40.203 296 169 5 212 503 355 646 6.75e-76 251
Msa0861440 AT1G76310.3 41.584 303 145 5 231 503 157 457 1.35e-69 230
Msa0861440 AT2G17620.1 46.263 281 148 3 228 507 148 426 3.79e-68 225
Msa0861440 AT1G76310.2 49.138 232 114 4 231 460 157 386 1.38e-67 223
Msa0861440 AT4G35620.1 49.027 257 128 3 234 489 155 409 4.54e-67 222
Msa0861440 AT1G44110.1 40.187 321 171 11 177 486 125 435 2.34e-62 211
Msa0861440 AT1G34460.6 42.169 332 143 9 81 401 108 401 2.69e-61 209
Msa0861440 AT1G34460.3 42.169 332 143 9 81 401 108 401 2.69e-61 209
Msa0861440 AT1G34460.8 42.169 332 143 9 81 401 108 401 2.69e-61 209
Msa0861440 AT1G34460.1 42.169 332 143 9 81 401 108 401 2.69e-61 209
Msa0861440 AT1G34460.7 42.169 332 143 9 81 401 108 401 3.29e-61 208
Msa0861440 AT1G34460.5 42.169 332 143 9 81 401 108 401 3.46e-61 209
Msa0861440 AT1G34460.2 42.470 332 139 10 81 401 108 398 4.31e-60 206
Msa0861440 AT1G34460.4 42.470 332 139 10 81 401 108 398 4.31e-60 206
Msa0861440 AT1G34460.9 42.997 307 126 8 104 401 121 387 5.25e-60 205
Msa0861440 AT4G35620.2 51.316 228 108 3 234 460 155 380 7.45e-60 202
Msa0861440 AT1G77390.1 41.603 262 140 8 234 486 162 419 3.66e-56 194
Msa0861440 AT5G25380.3 44.978 229 120 3 275 498 199 426 5.66e-56 193
Msa0861440 AT5G25380.1 44.978 229 120 3 275 498 199 426 5.66e-56 193
Msa0861440 AT5G25380.2 46.083 217 111 3 275 486 199 414 6.65e-56 192
Msa0861440 AT5G25380.4 44.978 229 120 3 275 498 205 432 9.26e-56 193
Msa0861440 AT5G11300.1 40.780 282 158 6 232 505 152 432 4.97e-55 191
Msa0861440 AT1G80370.1 43.777 233 122 7 236 461 183 413 3.85e-52 184
Msa0861440 AT1G76310.4 52.023 173 80 3 231 401 157 328 1.06e-51 179
Msa0861440 AT1G15570.1 37.324 284 167 7 229 505 169 448 1.36e-49 176
Msa0861440 AT5G43080.2 37.594 266 158 7 236 497 73 334 1.69e-49 174
Msa0861440 AT5G11300.2 44.954 218 112 5 232 442 152 368 1.53e-48 173
Msa0861440 AT1G47220.1 39.544 263 142 8 236 486 42 299 2.73e-48 170
Msa0861440 AT5G43080.1 36.667 270 160 7 236 497 73 339 5.38e-48 170
Msa0861440 AT1G47210.2 36.765 272 159 7 236 497 88 356 1.31e-46 166
Msa0861440 AT1G47230.1 39.574 235 133 5 270 497 117 349 5.57e-46 165
Msa0861440 AT1G20590.1 45.294 170 91 2 310 479 65 232 1.46e-45 160
Msa0861440 AT1G47230.2 39.407 236 133 6 270 497 117 350 2.72e-44 160
Msa0861440 AT1G47210.1 42.453 106 56 3 236 337 88 192 6.13e-19 85.5
Msa0861440 AT1G70210.1 27.982 218 131 7 269 467 66 276 8.83e-15 76.3

Find 111 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTACTCCTTATGTCTTTC+TGG 0.055058 5_4:-60788376 Msa0861440:CDS
CTGGGTTGATCACAAGATTT+TGG 0.152837 5_4:+60789666 None:intergenic
ACAAGCTGAAGTTCCTTTCT+AGG 0.205889 5_4:+60788662 None:intergenic
AGAGTCAGATAGAAAGTTTC+TGG 0.213074 5_4:+60788722 None:intergenic
TCTTGATTAGATTCTAGTTT+AGG 0.220630 5_4:-60787780 Msa0861440:exon
ACTTATGCCTGGTTTCATTT+AGG 0.235044 5_4:-60787693 Msa0861440:three_prime_UTR
TTTAAGTGTGTTACAAAGTT+TGG 0.239786 5_4:-60787634 Msa0861440:three_prime_UTR
TGAGAATAAGCAAAAGAATA+TGG 0.258137 5_4:-60789726 Msa0861440:CDS
CTTGATTAGATTCTAGTTTA+GGG 0.273475 5_4:-60787779 Msa0861440:exon
CATCCAAGTATGAAGAGATT+TGG 0.283042 5_4:-60788616 Msa0861440:CDS
TCTAGTTTAGGGTTGTCTTC+TGG 0.286204 5_4:-60787768 Msa0861440:three_prime_UTR
GCATGTTCCACCCTTGTTGC+AGG 0.310814 5_4:+60789329 None:intergenic
CTCATCTTAGCATTTATATC+TGG 0.312904 5_4:+60788797 None:intergenic
GAAAACTATCTTGAGAAATC+TGG 0.320459 5_4:-60788415 Msa0861440:CDS
GTCAATGTAGATGGAAAATA+TGG 0.326088 5_4:-60788211 Msa0861440:intron
CTTTCTAGGTACAGCCTTTG+TGG 0.334259 5_4:+60788676 None:intergenic
GAAGAAAGAGGAGGAGGGGA+AGG 0.338386 5_4:-60790539 Msa0861440:CDS
TAGAGAACAGGTTCTGGTTA+TGG 0.339299 5_4:-60788439 Msa0861440:CDS
CTCCTTATGTCTTTCTGGTT+CGG 0.340595 5_4:-60788371 Msa0861440:CDS
TTCAGAGTATCAGTCCAAAA+AGG 0.345889 5_4:+60788075 None:intergenic
GAAAGAGGAGGAGGGGAAGG+AGG 0.364130 5_4:-60790536 Msa0861440:CDS
ATGAAAGCTCACCATGAGTT+TGG 0.368616 5_4:+60787908 None:intergenic
CAAATGTACCTTGTTCTTCT+CGG 0.392731 5_4:+60789472 None:intergenic
ATCCAAGTATGAAGAGATTT+GGG 0.401159 5_4:-60788615 Msa0861440:CDS
AATGTTCTCAACCAATTCCT+TGG 0.401763 5_4:+60789029 None:intergenic
GGAGGAGGGGAAGGAGGAGA+AGG 0.403917 5_4:-60790530 Msa0861440:CDS
TGTAGTTATATGCTATTGAA+TGG 0.407864 5_4:-60787565 Msa0861440:three_prime_UTR
TAGAGTTGTGCCCAAGGAAT+TGG 0.412967 5_4:-60789040 Msa0861440:CDS
GAGAATAAGCAAAAGAATAT+GGG 0.431647 5_4:-60789725 Msa0861440:CDS
TCGTCGATCTTCTCTAGTCT+TGG 0.432729 5_4:-60790473 Msa0861440:CDS
AAAGAATCAACCTGTGAGGC+AGG 0.433697 5_4:+60787589 None:intergenic
GTGATCAACCCAGCAGATCT+TGG 0.435107 5_4:-60789656 Msa0861440:CDS
CCAGCACCTTGTGAGGCGTT+TGG 0.435541 5_4:+60789616 None:intergenic
ATCTTTGTGGGTGTGTGTTA+AGG 0.436610 5_4:-60790604 Msa0861440:CDS
TACCTTGTTCTTCTCGGCTG+CGG 0.437360 5_4:+60789478 None:intergenic
GATGATTGTATCTACTATAT+CGG 0.438706 5_4:-60787746 Msa0861440:three_prime_UTR
GCATTAGCACCAAGATCTGC+TGG 0.439323 5_4:+60789647 None:intergenic
TCCACCCTTGTTGCAGGAGC+AGG 0.439437 5_4:+60789335 None:intergenic
TGCCCAAATCTCTTCATACT+TGG 0.450835 5_4:+60788613 None:intergenic
AAGGAGAAACAAGCTGTTAG+AGG 0.454934 5_4:-60789245 Msa0861440:CDS
CAATGCATATGTTAGAGAAC+AGG 0.455302 5_4:-60788451 Msa0861440:CDS
GCAGAAGCAGCTATCATTGA+AGG 0.456254 5_4:+60788132 None:intergenic
AATTGTCAAGACCTTTAGTT+CGG 0.458770 5_4:-60789192 Msa0861440:CDS
AGCTGAAAGCACCGAACTAA+AGG 0.461925 5_4:+60789181 None:intergenic
AAAGTTGATTACGTTGTTGA+GGG 0.462423 5_4:-60790576 Msa0861440:CDS
ATCTGATAAGGATAATGAAT+TGG 0.467651 5_4:-60789001 Msa0861440:CDS
TGTTCCTGCTCCTGCAACAA+GGG 0.467937 5_4:-60789339 Msa0861440:CDS
GAACATTGATGTATCTGATA+AGG 0.468799 5_4:-60789013 Msa0861440:CDS
ATCTCATAATATTTCTGCTA+TGG 0.470837 5_4:-60790423 Msa0861440:CDS
CTGCTCCAGAGAGCAGGCTA+AGG 0.473888 5_4:-60787881 Msa0861440:CDS
ATGTTCTCAACCAATTCCTT+GGG 0.477458 5_4:+60789030 None:intergenic
ATTGCCCTTAGCCTGCTCTC+TGG 0.478232 5_4:+60787876 None:intergenic
CAGCCTTTGTGGACAAGAAT+CGG 0.484227 5_4:+60788687 None:intergenic
AGAAAGGAACTTCAGCTTGT+TGG 0.485403 5_4:-60788659 Msa0861440:CDS
GAATCATGACCCTGCCTCAC+AGG 0.485528 5_4:-60787599 Msa0861440:three_prime_UTR
TGAGAGCAATTCTTATTGAC+TGG 0.486519 5_4:-60788778 Msa0861440:CDS
TGTTCGTGTGCATGATTACA+TGG 0.488876 5_4:-60788828 Msa0861440:CDS
ACAATAACTTCAGGTTCTGC+AGG 0.490279 5_4:+60789299 None:intergenic
CACAAAGGCTGTACCTAGAA+AGG 0.495888 5_4:-60788675 Msa0861440:CDS
ATTCTGCTGCTCCAGAGAGC+AGG 0.501013 5_4:-60787887 Msa0861440:CDS
TTGTTGCAGGGCTCAGTTAG+CGG 0.512442 5_4:-60789513 Msa0861440:intron
TCGATCTTCTCTAGTCTTGG+TGG 0.513606 5_4:-60790470 Msa0861440:CDS
AAAAGTTGATTACGTTGTTG+AGG 0.514965 5_4:-60790577 Msa0861440:CDS
GAGCTGATGACAATAACTTC+AGG 0.520645 5_4:+60789290 None:intergenic
GAGAAAACAAACCTCTGGGT+TGG 0.526369 5_4:+60790366 None:intergenic
AACAAACAAGAAATCTTTGT+GGG 0.532287 5_4:-60790616 Msa0861440:CDS
ATATGTTAGAGAACAGGTTC+TGG 0.536395 5_4:-60788445 Msa0861440:CDS
ACAGACGAAGAAAGAGGAGG+AGG 0.538270 5_4:-60790545 Msa0861440:CDS
CTATCTTGAGAAATCTGGAA+TGG 0.549489 5_4:-60788410 Msa0861440:CDS
TTGTTCCTGCTCCTGCAACA+AGG 0.551530 5_4:-60789340 Msa0861440:CDS
TATGTTACCTCTTTGTCAGA+GGG 0.553169 5_4:+60788330 None:intergenic
TACCGAACCAGAAAGACATA+AGG 0.554202 5_4:+60788369 None:intergenic
GAACAAACAAGAAATCTTTG+TGG 0.561763 5_4:-60790617 Msa0861440:CDS
AGACGAAGAAAGAGGAGGAG+GGG 0.563133 5_4:-60790543 Msa0861440:CDS
AGAATAAGCAAAAGAATATG+GGG 0.564634 5_4:-60789724 Msa0861440:CDS
CAGCTCTGATGAAGAATCTG+AGG 0.565331 5_4:-60789273 Msa0861440:CDS
CAGACGAAGAAAGAGGAGGA+GGG 0.573322 5_4:-60790544 Msa0861440:CDS
TGAAGAGATTTGGGCACCAG+AGG 0.576486 5_4:-60788606 Msa0861440:intron
TGCTTGTAGAGTTGTGCCCA+AGG 0.577586 5_4:-60789046 Msa0861440:CDS
GTTGATTACGTTGTTGAGGG+TGG 0.579357 5_4:-60790573 Msa0861440:CDS
TGTTACCTCTTTGTCAGAGG+GGG 0.580307 5_4:+60788332 None:intergenic
AGCTGCTTCTGCTGTATATG+CGG 0.582597 5_4:-60788121 Msa0861440:CDS
TGAAGAATCTGAGGAAGTGA+AGG 0.582635 5_4:-60789264 Msa0861440:CDS
ATATGTTACCTCTTTGTCAG+AGG 0.585880 5_4:+60788329 None:intergenic
TCCTGCTCCTGCAACAAGGG+TGG 0.587370 5_4:-60789336 Msa0861440:CDS
GCGACTACAGACGAAGAAAG+AGG 0.597460 5_4:-60790551 Msa0861440:CDS
TGCTCCAGAGAGCAGGCTAA+GGG 0.599044 5_4:-60787880 Msa0861440:CDS
CGGCAAGATCAACCCTTGAG+AGG 0.603184 5_4:-60788101 Msa0861440:CDS
CATTAGCACCAAGATCTGCT+GGG 0.606851 5_4:+60789648 None:intergenic
CAGAAGCAGCTATCATTGAA+GGG 0.607897 5_4:+60788133 None:intergenic
AAGGAGGAGAAGGTGAGACG+AGG 0.608210 5_4:-60790520 Msa0861440:CDS
TATCAAACCAGCACCTTGTG+AGG 0.610247 5_4:+60789609 None:intergenic
GCTACTCTGAGGAACAACTA+AGG 0.611407 5_4:-60788041 Msa0861440:intron
AAGAATCAACCTGTGAGGCA+GGG 0.612589 5_4:+60787590 None:intergenic
CAGGGATTGTGCCAAACTCA+TGG 0.623770 5_4:-60787919 Msa0861440:CDS
GGTGCTTTCAGCTAGAAGCA+AGG 0.623928 5_4:-60789171 Msa0861440:intron
ATGTCACCAAACGCCTCACA+AGG 0.630342 5_4:-60789622 Msa0861440:intron
AGCCGCAGCCGAGAAGAACA+AGG 0.634015 5_4:-60789480 Msa0861440:intron
TGACCGATTCTTGTCCACAA+AGG 0.641766 5_4:-60788690 Msa0861440:CDS
GATACTCTGAAGCACTACAC+AGG 0.643296 5_4:-60788063 Msa0861440:CDS
GATCACTCCTAAATGAAACC+AGG 0.649184 5_4:+60787686 None:intergenic
ACTGGTTGATTGAAGTGCAT+AGG 0.656956 5_4:-60788760 Msa0861440:CDS
ATGTTACCTCTTTGTCAGAG+GGG 0.683719 5_4:+60788331 None:intergenic
GTTCGTGTGCATGATTACAT+GGG 0.685299 5_4:-60788827 Msa0861440:CDS
GCATCATAGAAAGTTCAGCA+AGG 0.685498 5_4:+60788181 None:intergenic
GAATAAGCAAAAGAATATGG+GGG 0.692143 5_4:-60789723 Msa0861440:CDS
ACCAGAAAGACATAAGGAGT+AGG 0.696020 5_4:+60788375 None:intergenic
TATCATTGAAGGGCAGTACG+AGG 0.696523 5_4:+60788143 None:intergenic
ACTACAGACGAAGAAAGAGG+AGG 0.698802 5_4:-60790548 Msa0861440:CDS
GCACTACACAGGCTACTCTG+AGG 0.714283 5_4:-60788052 Msa0861440:CDS
ACCGAACAAAACCAACCCAG+AGG 0.746551 5_4:-60790377 Msa0861440:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAGTAATTTTAGTTAAT+AGG - chr5_4:60787918-60787937 Msa0861440:CDS 10.0%
!!! TTTAGTAATTTTAGTTAATA+GGG - chr5_4:60787919-60787938 Msa0861440:CDS 10.0%
!!! TAGTTTTTATTAAGTATTTA+TGG - chr5_4:60788260-60788279 Msa0861440:intron 10.0%
!! AAACAATAATATGTTATATA+TGG - chr5_4:60789668-60789687 Msa0861440:CDS 10.0%
!! TAAACCGTATAAAAAATAAA+GGG + chr5_4:60789630-60789649 None:intergenic 15.0%
!! ATAAACCGTATAAAAAATAA+AGG + chr5_4:60789631-60789650 None:intergenic 15.0%
!! TGTTCACTGTTTAAATTAAA+TGG - chr5_4:60788016-60788035 Msa0861440:intron 20.0%
!!! ATTTGGTAATTTTGGTTATT+AGG - chr5_4:60788129-60788148 Msa0861440:CDS 20.0%
!!! TTTGGTAATTTTGGTTATTA+GGG - chr5_4:60788130-60788149 Msa0861440:CDS 20.0%
!!! TTTGATTTTCTGTAAAGTTT+TGG - chr5_4:60788157-60788176 Msa0861440:CDS 20.0%
!! ATTAACAAAAATCATAGATC+AGG + chr5_4:60788448-60788467 None:intergenic 20.0%
!!! TGATCTATGATTTTTGTTAA+TGG - chr5_4:60788447-60788466 Msa0861440:CDS 20.0%
!!! TGATTTTTGTTAATGGAATT+AGG - chr5_4:60788454-60788473 Msa0861440:CDS 20.0%
!! AAATTAAAAAGATAAGCATG+AGG + chr5_4:60788646-60788665 None:intergenic 20.0%
!! CAACATAAACAAATAAAATC+AGG + chr5_4:60788670-60788689 None:intergenic 20.0%
!!! TCTTTTAATCTTGTGAAATA+TGG - chr5_4:60789061-60789080 Msa0861440:intron 20.0%
!!! TATTAGTCTACATTGAAAAA+TGG + chr5_4:60789105-60789124 None:intergenic 20.0%
!!! AACTCCCTTTATTTTTTATA+CGG - chr5_4:60789623-60789642 Msa0861440:CDS 20.0%
!! ATTACTTTATAGTTTGATTG+TGG - chr5_4:60789897-60789916 Msa0861440:intron 20.0%
!!! TTTTGTTTATTTATGTTGTC+AGG - chr5_4:60790265-60790284 Msa0861440:intron 20.0%
!! TTTGTTTATTTATGTTGTCA+GGG - chr5_4:60790266-60790285 Msa0861440:intron 20.0%
!! CACTTAAAAAAATAGCAATA+TGG + chr5_4:60790557-60790576 None:intergenic 20.0%
! AACAAACAAGAAATCTTTGT+GGG - chr5_4:60787587-60787606 Msa0861440:three_prime_UTR 25.0%
!! ATCTCATAATATTTCTGCTA+TGG - chr5_4:60787780-60787799 Msa0861440:exon 25.0%
!! GATTTGATTCTGAAAAATTG+AGG - chr5_4:60787885-60787904 Msa0861440:CDS 25.0%
!!! TTTTCTGAGATGAAATATGA+GGG - chr5_4:60788228-60788247 Msa0861440:intron 25.0%
! TTATTTGTTCAGTGTGTAAA+TGG - chr5_4:60788351-60788370 Msa0861440:CDS 25.0%
! TATTTGTTCAGTGTGTAAAT+GGG - chr5_4:60788352-60788371 Msa0861440:CDS 25.0%
! TGAGAATAAGCAAAAGAATA+TGG - chr5_4:60788477-60788496 Msa0861440:CDS 25.0%
! GAGAATAAGCAAAAGAATAT+GGG - chr5_4:60788478-60788497 Msa0861440:CDS 25.0%
! AGAATAAGCAAAAGAATATG+GGG - chr5_4:60788479-60788498 Msa0861440:CDS 25.0%
! TTTCGAGATACAATGTATTA+AGG + chr5_4:60788806-60788825 None:intergenic 25.0%
!!! TATCTCGAAATTTGTTTTGA+TGG - chr5_4:60788816-60788835 Msa0861440:CDS 25.0%
! ATCTGATAAGGATAATGAAT+TGG - chr5_4:60789202-60789221 Msa0861440:CDS 25.0%
!!! TCTTGATTAGATTCTAGTTT+AGG - chr5_4:60790423-60790442 Msa0861440:CDS 25.0%
!!! CTTGATTAGATTCTAGTTTA+GGG - chr5_4:60790424-60790443 Msa0861440:CDS 25.0%
! GATGATTGTATCTACTATAT+CGG - chr5_4:60790457-60790476 Msa0861440:CDS 25.0%
! TTTAAGTGTGTTACAAAGTT+TGG - chr5_4:60790569-60790588 Msa0861440:CDS 25.0%
! TGTAGTTATATGCTATTGAA+TGG - chr5_4:60790638-60790657 Msa0861440:CDS 25.0%
GAACAAACAAGAAATCTTTG+TGG - chr5_4:60787586-60787605 Msa0861440:three_prime_UTR 30.0%
! AAAAGTTGATTACGTTGTTG+AGG - chr5_4:60787626-60787645 Msa0861440:three_prime_UTR 30.0%
! AAAGTTGATTACGTTGTTGA+GGG - chr5_4:60787627-60787646 Msa0861440:three_prime_UTR 30.0%
AAAAGAGAAAACAAACCTCT+GGG + chr5_4:60787844-60787863 None:intergenic 30.0%
TCTGAAAAATTGAGGATTGA+AGG - chr5_4:60787893-60787912 Msa0861440:CDS 30.0%
! TCAAACTTTAGAAAACAACG+AGG + chr5_4:60788046-60788065 None:intergenic 30.0%
!! TGATTCTGAGATGAAATATG+AGG - chr5_4:60788103-60788122 Msa0861440:CDS 30.0%
!! GATTCTGAGATGAAATATGA+GGG - chr5_4:60788104-60788123 Msa0861440:CDS 30.0%
!!! GTTTTCTGAGATGAAATATG+AGG - chr5_4:60788227-60788246 Msa0861440:intron 30.0%
! ATGAAATATGAGGGTGATTT+TGG - chr5_4:60788113-60788132 Msa0861440:CDS 30.0%
GAATAAGCAAAAGAATATGG+GGG - chr5_4:60788480-60788499 Msa0861440:CDS 30.0%
! TTTGTTTATGTTGTTGTTGC+AGG - chr5_4:60788677-60788696 Msa0861440:CDS 30.0%
! TTGTTTATGTTGTTGTTGCA+GGG - chr5_4:60788678-60788697 Msa0861440:CDS 30.0%
! CTACTTTGTTCCATTTTCAA+AGG - chr5_4:60788772-60788791 Msa0861440:CDS 30.0%
! AAAGGTCTTGACAATTTTCT+TGG + chr5_4:60789007-60789026 None:intergenic 30.0%
AATTGTCAAGACCTTTAGTT+CGG - chr5_4:60789011-60789030 Msa0861440:CDS 30.0%
AATATGGTTTATGTGACTTG+TGG - chr5_4:60789077-60789096 Msa0861440:intron 30.0%
! GAACATAATTTGTCAAACAC+AGG - chr5_4:60789133-60789152 Msa0861440:intron 30.0%
GAACATTGATGTATCTGATA+AGG - chr5_4:60789190-60789209 Msa0861440:CDS 30.0%
CTCATCTTAGCATTTATATC+TGG + chr5_4:60789409-60789428 None:intergenic 30.0%
ATCCAAGTATGAAGAGATTT+GGG - chr5_4:60789588-60789607 Msa0861440:intron 30.0%
GAAAACTATCTTGAGAAATC+TGG - chr5_4:60789788-60789807 Msa0861440:intron 30.0%
!!! TCTGTTTTTGTCAATGTAGA+TGG - chr5_4:60789983-60790002 Msa0861440:intron 30.0%
GTCAATGTAGATGGAAAATA+TGG - chr5_4:60789992-60790011 Msa0861440:intron 30.0%
!! AGATTCTGAAGACAAGTTTT+TGG + chr5_4:60790406-60790425 None:intergenic 30.0%
GAAAAGAGAAAACAAACCTC+TGG + chr5_4:60787845-60787864 None:intergenic 35.0%
GATGAAATATGAGGGTGATT+TGG - chr5_4:60788112-60788131 Msa0861440:CDS 35.0%
!!! TGAGGGTGATTTGGTAATTT+TGG - chr5_4:60788121-60788140 Msa0861440:CDS 35.0%
TTAGTGTTTACGTGATTCTC+TGG - chr5_4:60788400-60788419 Msa0861440:CDS 35.0%
CAAATGTACCTTGTTCTTCT+CGG + chr5_4:60788734-60788753 None:intergenic 35.0%
! GGAAACACAACCTTTGAAAA+TGG + chr5_4:60788785-60788804 None:intergenic 35.0%
ATGTTCTCAACCAATTCCTT+GGG + chr5_4:60789176-60789195 None:intergenic 35.0%
AATGTTCTCAACCAATTCCT+TGG + chr5_4:60789177-60789196 None:intergenic 35.0%
TTGACTTTGATGAATGACAC+AGG - chr5_4:60789348-60789367 Msa0861440:intron 35.0%
TGAGAGCAATTCTTATTGAC+TGG - chr5_4:60789425-60789444 Msa0861440:intron 35.0%
AGAGTCAGATAGAAAGTTTC+TGG + chr5_4:60789484-60789503 None:intergenic 35.0%
CATCCAAGTATGAAGAGATT+TGG - chr5_4:60789587-60789606 Msa0861440:intron 35.0%
TCTGTTTCATTTGTGTGTAC+AGG - chr5_4:60789704-60789723 Msa0861440:CDS 35.0%
CAATGCATATGTTAGAGAAC+AGG - chr5_4:60789752-60789771 Msa0861440:intron 35.0%
ATATGTTAGAGAACAGGTTC+TGG - chr5_4:60789758-60789777 Msa0861440:intron 35.0%
CTATCTTGAGAAATCTGGAA+TGG - chr5_4:60789793-60789812 Msa0861440:intron 35.0%
TATGTTACCTCTTTGTCAGA+GGG + chr5_4:60789876-60789895 None:intergenic 35.0%
ATATGTTACCTCTTTGTCAG+AGG + chr5_4:60789877-60789896 None:intergenic 35.0%
ACAGAATCCACAATTAGACA+AGG + chr5_4:60789968-60789987 None:intergenic 35.0%
! TCAGAGTATCAGTCCAAAAA+GGG + chr5_4:60790130-60790149 None:intergenic 35.0%
! TTCAGAGTATCAGTCCAAAA+AGG + chr5_4:60790131-60790150 None:intergenic 35.0%
!!! TGACTTTTGAAACTTATGCC+TGG - chr5_4:60790499-60790518 Msa0861440:CDS 35.0%
ACTTATGCCTGGTTTCATTT+AGG - chr5_4:60790510-60790529 Msa0861440:CDS 35.0%
ACAAAAAGAATCAACCTGTG+AGG + chr5_4:60790621-60790640 None:intergenic 35.0%
ATCTTTGTGGGTGTGTGTTA+AGG - chr5_4:60787599-60787618 Msa0861440:three_prime_UTR 40.0%
!!! TCTAGTCTTGGTGGTGTTTT+TGG - chr5_4:60787742-60787761 Msa0861440:three_prime_UTR 40.0%
CAAAAGAATATGGGGGTTGA+AGG - chr5_4:60788487-60788506 Msa0861440:intron 40.0%
!!! CTGGGTTGATCACAAGATTT+TGG + chr5_4:60788540-60788559 None:intergenic 40.0%
! ACAATAACTTCAGGTTCTGC+AGG + chr5_4:60788907-60788926 None:intergenic 40.0%
GAGCTGATGACAATAACTTC+AGG + chr5_4:60788916-60788935 None:intergenic 40.0%
TGAAGAATCTGAGGAAGTGA+AGG - chr5_4:60788939-60788958 Msa0861440:intron 40.0%
AAGGAGAAACAAGCTGTTAG+AGG - chr5_4:60788958-60788977 Msa0861440:CDS 40.0%
! GGTCTTGACAATTTTCTTGG+TGG + chr5_4:60789004-60789023 None:intergenic 40.0%
TGTTCGTGTGCATGATTACA+TGG - chr5_4:60789375-60789394 Msa0861440:intron 40.0%
GTTCGTGTGCATGATTACAT+GGG - chr5_4:60789376-60789395 Msa0861440:intron 40.0%
ACTGGTTGATTGAAGTGCAT+AGG - chr5_4:60789443-60789462 Msa0861440:intron 40.0%
ACAAGCTGAAGTTCCTTTCT+AGG + chr5_4:60789544-60789563 None:intergenic 40.0%
AGAAAGGAACTTCAGCTTGT+TGG - chr5_4:60789544-60789563 Msa0861440:intron 40.0%
TGCCCAAATCTCTTCATACT+TGG + chr5_4:60789593-60789612 None:intergenic 40.0%
AATAAAGGGAGTTCTACCTC+TGG + chr5_4:60789616-60789635 None:intergenic 40.0%
! TAGAGAACAGGTTCTGGTTA+TGG - chr5_4:60789764-60789783 Msa0861440:intron 40.0%
TCCTACTCCTTATGTCTTTC+TGG - chr5_4:60789827-60789846 Msa0861440:intron 40.0%
ACCAGAAAGACATAAGGAGT+AGG + chr5_4:60789831-60789850 None:intergenic 40.0%
!! CTCCTTATGTCTTTCTGGTT+CGG - chr5_4:60789832-60789851 Msa0861440:intron 40.0%
TACCGAACCAGAAAGACATA+AGG + chr5_4:60789837-60789856 None:intergenic 40.0%
ATGTTACCTCTTTGTCAGAG+GGG + chr5_4:60789875-60789894 None:intergenic 40.0%
TGATGCAATGTGGAATGGAA+CGG - chr5_4:60789942-60789961 Msa0861440:intron 40.0%
GCATCATAGAAAGTTCAGCA+AGG + chr5_4:60790025-60790044 None:intergenic 40.0%
CAGAAGCAGCTATCATTGAA+GGG + chr5_4:60790073-60790092 None:intergenic 40.0%
ATGAAAGCTCACCATGAGTT+TGG + chr5_4:60790298-60790317 None:intergenic 40.0%
!!! TCTGAAGACAAGTTTTTGGC+TGG + chr5_4:60790402-60790421 None:intergenic 40.0%
! TCTAGTTTAGGGTTGTCTTC+TGG - chr5_4:60790435-60790454 Msa0861440:CDS 40.0%
GATCACTCCTAAATGAAACC+AGG + chr5_4:60790520-60790539 None:intergenic 40.0%
GTTGATTACGTTGTTGAGGG+TGG - chr5_4:60787630-60787649 Msa0861440:three_prime_UTR 45.0%
ACTACAGACGAAGAAAGAGG+AGG - chr5_4:60787655-60787674 Msa0861440:three_prime_UTR 45.0%
TCGTCGATCTTCTCTAGTCT+TGG - chr5_4:60787730-60787749 Msa0861440:three_prime_UTR 45.0%
!! TCGATCTTCTCTAGTCTTGG+TGG - chr5_4:60787733-60787752 Msa0861440:three_prime_UTR 45.0%
!!! ACCTCTGGGTTGGTTTTGTT+CGG + chr5_4:60787830-60787849 None:intergenic 45.0%
GAGAAAACAAACCTCTGGGT+TGG + chr5_4:60787840-60787859 None:intergenic 45.0%
TCAGTGTGTAAATGGGTCTG+AGG - chr5_4:60788359-60788378 Msa0861440:CDS 45.0%
CAGTGTGTAAATGGGTCTGA+GGG - chr5_4:60788360-60788379 Msa0861440:CDS 45.0%
CATTAGCACCAAGATCTGCT+GGG + chr5_4:60788558-60788577 None:intergenic 45.0%
TATCAAACCAGCACCTTGTG+AGG + chr5_4:60788597-60788616 None:intergenic 45.0%
! CAGCTCTGATGAAGAATCTG+AGG - chr5_4:60788930-60788949 Msa0861440:intron 45.0%
!! AGCTGAAAGCACCGAACTAA+AGG + chr5_4:60789025-60789044 None:intergenic 45.0%
TAGAGTTGTGCCCAAGGAAT+TGG - chr5_4:60789163-60789182 Msa0861440:intron 45.0%
! TGACCGATTCTTGTCCACAA+AGG - chr5_4:60789513-60789532 Msa0861440:intron 45.0%
CAGCCTTTGTGGACAAGAAT+CGG + chr5_4:60789519-60789538 None:intergenic 45.0%
CTTTCTAGGTACAGCCTTTG+TGG + chr5_4:60789530-60789549 None:intergenic 45.0%
CACAAAGGCTGTACCTAGAA+AGG - chr5_4:60789528-60789547 Msa0861440:intron 45.0%
TGTTACCTCTTTGTCAGAGG+GGG + chr5_4:60789874-60789893 None:intergenic 45.0%
GTCATGTGACTGATGCAATG+TGG - chr5_4:60789932-60789951 Msa0861440:intron 45.0%
GTGACTGATGCAATGTGGAA+TGG - chr5_4:60789937-60789956 Msa0861440:intron 45.0%
TATCATTGAAGGGCAGTACG+AGG + chr5_4:60790063-60790082 None:intergenic 45.0%
GCAGAAGCAGCTATCATTGA+AGG + chr5_4:60790074-60790093 None:intergenic 45.0%
AGCTGCTTCTGCTGTATATG+CGG - chr5_4:60790082-60790101 Msa0861440:intron 45.0%
!! GATACTCTGAAGCACTACAC+AGG - chr5_4:60790140-60790159 Msa0861440:intron 45.0%
! GCTACTCTGAGGAACAACTA+AGG - chr5_4:60790162-60790181 Msa0861440:intron 45.0%
AAGAATCAACCTGTGAGGCA+GGG + chr5_4:60790616-60790635 None:intergenic 45.0%
AAAGAATCAACCTGTGAGGC+AGG + chr5_4:60790617-60790636 None:intergenic 45.0%
GCGACTACAGACGAAGAAAG+AGG - chr5_4:60787652-60787671 Msa0861440:three_prime_UTR 50.0%
ACAGACGAAGAAAGAGGAGG+AGG - chr5_4:60787658-60787677 Msa0861440:three_prime_UTR 50.0%
CAGACGAAGAAAGAGGAGGA+GGG - chr5_4:60787659-60787678 Msa0861440:three_prime_UTR 50.0%
AGACGAAGAAAGAGGAGGAG+GGG - chr5_4:60787660-60787679 Msa0861440:three_prime_UTR 50.0%
!!! CTGGGTTGGTTTTGTTCGGT+AGG + chr5_4:60787826-60787845 None:intergenic 50.0%
ACCGAACAAAACCAACCCAG+AGG - chr5_4:60787826-60787845 Msa0861440:CDS 50.0%
TGTGTAAATGGGTCTGAGGG+TGG - chr5_4:60788363-60788382 Msa0861440:CDS 50.0%
GTGATCAACCCAGCAGATCT+TGG - chr5_4:60788547-60788566 Msa0861440:intron 50.0%
GCATTAGCACCAAGATCTGC+TGG + chr5_4:60788559-60788578 None:intergenic 50.0%
ATGTCACCAAACGCCTCACA+AGG - chr5_4:60788581-60788600 Msa0861440:intron 50.0%
TTGTTGCAGGGCTCAGTTAG+CGG - chr5_4:60788690-60788709 Msa0861440:CDS 50.0%
TACCTTGTTCTTCTCGGCTG+CGG + chr5_4:60788728-60788747 None:intergenic 50.0%
TTGTTCCTGCTCCTGCAACA+AGG - chr5_4:60788863-60788882 Msa0861440:intron 50.0%
TGTTCCTGCTCCTGCAACAA+GGG - chr5_4:60788864-60788883 Msa0861440:intron 50.0%
GGTGCTTTCAGCTAGAAGCA+AGG - chr5_4:60789032-60789051 Msa0861440:CDS 50.0%
TGCTTGTAGAGTTGTGCCCA+AGG - chr5_4:60789157-60789176 Msa0861440:intron 50.0%
TGAAGAGATTTGGGCACCAG+AGG - chr5_4:60789597-60789616 Msa0861440:intron 50.0%
! GGAACGGCCTTGTCTAATTG+TGG - chr5_4:60789958-60789977 Msa0861440:intron 50.0%
CCAAAAAGGGCTCCTCTCAA+GGG + chr5_4:60790117-60790136 None:intergenic 50.0%
TCCAAAAAGGGCTCCTCTCA+AGG + chr5_4:60790118-60790137 None:intergenic 50.0%
CAGGGATTGTGCCAAACTCA+TGG - chr5_4:60790284-60790303 Msa0861440:intron 50.0%
GAAGAAAGAGGAGGAGGGGA+AGG - chr5_4:60787664-60787683 Msa0861440:three_prime_UTR 55.0%
AAGGAGGAGAAGGTGAGACG+AGG - chr5_4:60787683-60787702 Msa0861440:three_prime_UTR 55.0%
GCATGTTCCACCCTTGTTGC+AGG + chr5_4:60788877-60788896 None:intergenic 55.0%
TACCTCTTTGTCAGAGGGGG+TGG + chr5_4:60789871-60789890 None:intergenic 55.0%
CGGCAAGATCAACCCTTGAG+AGG - chr5_4:60790102-60790121 Msa0861440:intron 55.0%
! CCCTTGAGAGGAGCCCTTTT+TGG - chr5_4:60790114-60790133 Msa0861440:intron 55.0%
GCACTACACAGGCTACTCTG+AGG - chr5_4:60790151-60790170 Msa0861440:intron 55.0%
ATTCTGCTGCTCCAGAGAGC+AGG - chr5_4:60790316-60790335 Msa0861440:intron 55.0%
TGCTCCAGAGAGCAGGCTAA+GGG - chr5_4:60790323-60790342 Msa0861440:intron 55.0%
ATTGCCCTTAGCCTGCTCTC+TGG + chr5_4:60790330-60790349 None:intergenic 55.0%
GAATCATGACCCTGCCTCAC+AGG - chr5_4:60790604-60790623 Msa0861440:CDS 55.0%
GAAAGAGGAGGAGGGGAAGG+AGG - chr5_4:60787667-60787686 Msa0861440:three_prime_UTR 60.0%
! CCAGCACCTTGTGAGGCGTT+TGG + chr5_4:60788590-60788609 None:intergenic 60.0%
CCAAACGCCTCACAAGGTGC+TGG - chr5_4:60788587-60788606 Msa0861440:intron 60.0%
AGCCGCAGCCGAGAAGAACA+AGG - chr5_4:60788723-60788742 Msa0861440:CDS 60.0%
TCCTGCTCCTGCAACAAGGG+TGG - chr5_4:60788867-60788886 Msa0861440:intron 60.0%
TCCACCCTTGTTGCAGGAGC+AGG + chr5_4:60788871-60788890 None:intergenic 60.0%
CTCTTTGTCAGAGGGGGTGG+AGG + chr5_4:60789868-60789887 None:intergenic 60.0%
CTCCACCCCCTCTGACAAAG+AGG - chr5_4:60789866-60789885 Msa0861440:intron 60.0%
CTGCTCCAGAGAGCAGGCTA+AGG - chr5_4:60790322-60790341 Msa0861440:intron 60.0%
GGAGGAGGGGAAGGAGGAGA+AGG - chr5_4:60787673-60787692 Msa0861440:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 60787547 60790678 60787547 ID=Msa0861440;Name=Msa0861440
chr5_4 mRNA 60787547 60790678 60787547 ID=Msa0861440-mRNA-1;Parent=Msa0861440;Name=Msa0861440-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|0.88|1|1|1|9|250|507
chr5_4 exon 60787547 60787938 60787547 ID=Msa0861440-mRNA-1:exon:18828;Parent=Msa0861440-mRNA-1
chr5_4 exon 60788042 60788223 60788042 ID=Msa0861440-mRNA-1:exon:18827;Parent=Msa0861440-mRNA-1
chr5_4 exon 60788338 60788499 60788338 ID=Msa0861440-mRNA-1:exon:18826;Parent=Msa0861440-mRNA-1
chr5_4 exon 60788607 60788855 60788607 ID=Msa0861440-mRNA-1:exon:18825;Parent=Msa0861440-mRNA-1
chr5_4 exon 60788951 60789070 60788951 ID=Msa0861440-mRNA-1:exon:18824;Parent=Msa0861440-mRNA-1
chr5_4 exon 60789172 60789366 60789172 ID=Msa0861440-mRNA-1:exon:18823;Parent=Msa0861440-mRNA-1
chr5_4 exon 60789481 60789526 60789481 ID=Msa0861440-mRNA-1:exon:18822;Parent=Msa0861440-mRNA-1
chr5_4 exon 60789623 60789749 60789623 ID=Msa0861440-mRNA-1:exon:18821;Parent=Msa0861440-mRNA-1
chr5_4 exon 60790378 60790678 60790378 ID=Msa0861440-mRNA-1:exon:18820;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60790378 60790678 60790378 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60789623 60789749 60789623 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60789481 60789526 60789481 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60789172 60789366 60789172 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60788951 60789070 60788951 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60788607 60788855 60788607 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60788338 60788499 60788338 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60788042 60788223 60788042 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 CDS 60787797 60787938 60787797 ID=Msa0861440-mRNA-1:cds;Parent=Msa0861440-mRNA-1
chr5_4 three_prime_UTR 60787547 60787796 60787547 ID=Msa0861440-mRNA-1:three_prime_utr;Parent=Msa0861440-mRNA-1
Gene Sequence

>Msa0861440

CACACTCTCAAAAAATCATCATCGTTATTGTTACAGAGAGAACAAACAAGAAATCTTTGTGGGTGTGTGTTAAGGTTACAAAAGTTGATTACGTTGTTGAGGGTGGCGACTACAGACGAAGAAAGAGGAGGAGGGGAAGGAGGAGAAGGTGAGACGAGGAACAGTCGAATTCACGTGTTTCTTTCGTCGATCTTCTCTAGTCTTGGTGGTGTTTTTGGATCTAATCTTCAAGAATCTCATAATATTTCTGCTATGGCTTCTAGAGCTGTCATTGCTCCTACCGAACAAAACCAACCCAGAGGTGAGAATAAGCAAAAGAATATGGGGGTTGAAGGAAGAAACAGAAAAGTACTTCAAGATATCCAAAATCTTGTGATCAACCCAGCAGATCTTGGTGCTAATGCTAATGTCACCAAACGCCTCACAAGGGCTCAGTTAGCGGCTCTTGCTCAAGCCGCAGCCGAGAAGAACAAGAACTTTGTTCCTGCTCCTGCAACAAGGGTGGAACATGCTCAGAAGCCTGCAGAACCTGAAGTTATTGTCATCAGCTCTGATGAAGAATCTGAGGAAGTGAAGGAGAAACAAGCTGTTAGAGGAAGAAAAATTAGAGAAAGATCCACCAAGAAAATTGTCAAGACCTTTAGTTCGGTGCTTTCAGCTAGAAGCAAGGCTGCTTGTAGAGTTGTGCCCAAGGAATTGGTTGAGAACATTGATGTATCTGATAAGGATAATGAATTGGCTGCAACTGAGTATATTGATGACATCTACAAGTATTACAAACTCTCTGAAGATGATGTTCGTGTGCATGATTACATGGGTTCACAGCCAGATATAAATGCTAAGATGAGAGCAATTCTTATTGACTGGTTGATTGAAGTGCATAGGAAATTTGAACTCATGCCAGAAACTTTCTATCTGACTCTCAACATTGTTGACCGATTCTTGTCCACAAAGGCTGTACCTAGAAAGGAACTTCAGCTTGTTGGCATAAGCTCAATGCTTATTGCATCCAAGTATGAAGAGATTTGGGCACCAGAGGTCAATGATTTTGTATGCATATCAGACAATGCATATGTTAGAGAACAGGTTCTGGTTATGGAGAAAACTATCTTGAGAAATCTGGAATGGTATTTGACAGTTCCTACTCCTTATGTCTTTCTGGTTCGGTACATCAAAGCCTCCACCCCCTCTGACAAAGAGATGGAAAATATGGTGAATTTCCTTGCTGAACTTTCTATGATGCATTATGCTACTGTATCCTCGTACTGCCCTTCAATGATAGCTGCTTCTGCTGTATATGCGGCAAGATCAACCCTTGAGAGGAGCCCTTTTTGGACTGATACTCTGAAGCACTACACAGGCTACTCTGAGGAACAACTAAGGGATTGTGCCAAACTCATGGTGAGCTTTCATTCTGCTGCTCCAGAGAGCAGGCTAAGGGCAATTTACAAGAAGTTCTGTAGCTCTGATCGTTGTGCTGTTGCTCTTATGACTCCAGCCAAAAACTTGTCTTCAGAATCTTGA

Protein sequence

>Msa0861440

HTLKKSSSLLLQREQTRNLCGCVLRLQKLITLLRVATTDEERGGGEGGEGETRNSRIHVFLSSIFSSLGGVFGSNLQESHNISAMASRAVIAPTEQNQPRGENKQKNMGVEGRNRKVLQDIQNLVINPADLGANANVTKRLTRAQLAALAQAAAEKNKNFVPAPATRVEHAQKPAEPEVIVISSDEESEEVKEKQAVRGRKIRERSTKKIVKTFSSVLSARSKAACRVVPKELVENIDVSDKDNELAATEYIDDIYKYYKLSEDDVRVHDYMGSQPDINAKMRAILIDWLIEVHRKFELMPETFYLTLNIVDRFLSTKAVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLVMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSDKEMENMVNFLAELSMMHYATVSSYCPSMIAASAVYAARSTLERSPFWTDTLKHYTGYSEEQLRDCAKLMVSFHSAAPESRLRAIYKKFCSSDRCAVALMTPAKNLSSES*