Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641960 | XP_003606223.2 | 97.419 | 465 | 7 | 1 | 1 | 465 | 81 | 540 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641960 | sp|Q9ZUX1|C94C1_ARATH | 60.128 | 469 | 165 | 5 | 2 | 465 | 44 | 495 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0641960 | Msa0680900 | 0.918590 | 1.291216e-86 | -8.615850e-47 |
| Msa0641960 | Msa0710810 | 0.814529 | 1.470742e-51 | -8.615850e-47 |
| Msa0641960 | Msa0881750 | 0.814307 | 1.646870e-51 | -8.615850e-47 |
| Msa0641960 | Msa1200270 | 0.806494 | 8.006927e-50 | -8.615850e-47 |
| Msa0641960 | Msa1221280 | 0.806351 | 8.579331e-50 | -8.615850e-47 |
| Msa0207680 | Msa0641960 | 0.812828 | 3.482531e-51 | -8.615850e-47 |
| Msa0545820 | Msa0641960 | 0.959521 | 1.559729e-117 | -8.615850e-47 |
| Msa0576180 | Msa0641960 | 0.806956 | 6.395569e-50 | -8.615850e-47 |
| Msa0601700 | Msa0641960 | 0.898427 | 5.360719e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641960 | MtrunA17_Chr4g0026941 | 97.419 | 465 | 7 | 1 | 1 | 465 | 81 | 540 | 0.0 | 934 |
| Msa0641960 | MtrunA17_Chr2g0321171 | 65.733 | 464 | 139 | 3 | 1 | 464 | 55 | 498 | 0.0 | 637 |
| Msa0641960 | MtrunA17_Chr1g0178971 | 60.297 | 471 | 160 | 5 | 2 | 464 | 61 | 512 | 0.0 | 580 |
| Msa0641960 | MtrunA17_Chr7g0225531 | 44.561 | 478 | 227 | 9 | 3 | 464 | 56 | 511 | 6.76e-139 | 409 |
| Msa0641960 | MtrunA17_Chr7g0260831 | 44.635 | 466 | 224 | 10 | 11 | 464 | 59 | 502 | 2.67e-138 | 407 |
| Msa0641960 | MtrunA17_Chr3g0119681 | 45.929 | 479 | 217 | 9 | 10 | 465 | 59 | 518 | 5.91e-135 | 399 |
| Msa0641960 | MtrunA17_Chr7g0255131 | 44.776 | 469 | 227 | 8 | 10 | 464 | 58 | 508 | 2.60e-133 | 394 |
| Msa0641960 | MtrunA17_Chr7g0260821 | 43.562 | 466 | 229 | 12 | 11 | 464 | 60 | 503 | 2.60e-130 | 386 |
| Msa0641960 | MtrunA17_Chr1g0184461 | 44.000 | 475 | 235 | 10 | 1 | 464 | 50 | 504 | 8.68e-123 | 367 |
| Msa0641960 | MtrunA17_Chr1g0184421 | 42.553 | 470 | 239 | 9 | 7 | 465 | 56 | 505 | 2.21e-120 | 361 |
| Msa0641960 | MtrunA17_Chr4g0038271 | 41.060 | 453 | 229 | 8 | 31 | 464 | 127 | 560 | 3.80e-111 | 339 |
| Msa0641960 | MtrunA17_Chr1g0164321 | 41.943 | 453 | 222 | 10 | 35 | 464 | 113 | 547 | 3.76e-109 | 334 |
| Msa0641960 | MtrunA17_Chr8g0387001 | 39.819 | 442 | 237 | 6 | 34 | 464 | 82 | 505 | 7.83e-106 | 324 |
| Msa0641960 | MtrunA17_Chr8g0348751 | 39.597 | 447 | 236 | 8 | 34 | 464 | 82 | 510 | 1.56e-103 | 319 |
| Msa0641960 | MtrunA17_Chr3g0104351 | 39.421 | 449 | 231 | 7 | 34 | 464 | 91 | 516 | 3.67e-102 | 315 |
| Msa0641960 | MtrunA17_Chr5g0429651 | 41.163 | 447 | 224 | 8 | 34 | 464 | 85 | 508 | 1.02e-100 | 310 |
| Msa0641960 | MtrunA17_Chr8g0351461 | 37.107 | 477 | 262 | 7 | 7 | 465 | 54 | 510 | 9.19e-99 | 305 |
| Msa0641960 | MtrunA17_Chr4g0067191 | 37.628 | 489 | 249 | 13 | 12 | 465 | 49 | 516 | 1.36e-98 | 305 |
| Msa0641960 | MtrunA17_Chr8g0351401 | 37.553 | 474 | 252 | 9 | 7 | 459 | 55 | 505 | 1.66e-98 | 305 |
| Msa0641960 | MtrunA17_Chr8g0351441 | 36.897 | 477 | 263 | 7 | 7 | 465 | 54 | 510 | 8.05e-98 | 303 |
| Msa0641960 | MtrunA17_Chr8g0351311 | 37.553 | 474 | 258 | 12 | 7 | 464 | 61 | 512 | 3.93e-95 | 296 |
| Msa0641960 | MtrunA17_Chr8g0351421 | 35.983 | 478 | 267 | 8 | 7 | 465 | 54 | 511 | 7.15e-95 | 295 |
| Msa0641960 | MtrunA17_Chr8g0351391 | 36.152 | 473 | 265 | 8 | 7 | 464 | 61 | 511 | 8.23e-92 | 288 |
| Msa0641960 | MtrunA17_Chr1g0204271 | 34.177 | 474 | 274 | 9 | 7 | 464 | 55 | 506 | 1.30e-89 | 282 |
| Msa0641960 | MtrunA17_Chr2g0309301 | 64.894 | 188 | 63 | 2 | 139 | 326 | 1 | 185 | 2.23e-81 | 249 |
| Msa0641960 | MtrunA17_Chr6g0449381 | 33.183 | 443 | 264 | 9 | 35 | 464 | 82 | 505 | 3.26e-81 | 260 |
| Msa0641960 | MtrunA17_Chr7g0214931 | 38.961 | 385 | 199 | 9 | 8 | 374 | 73 | 439 | 1.87e-80 | 256 |
| Msa0641960 | MtrunA17_Chr1g0184471 | 39.267 | 382 | 185 | 7 | 7 | 382 | 51 | 391 | 4.74e-79 | 251 |
| Msa0641960 | MtrunA17_Chr6g0449331 | 33.187 | 455 | 260 | 10 | 34 | 464 | 81 | 515 | 5.88e-78 | 252 |
| Msa0641960 | MtrunA17_Chr8g0380501 | 32.553 | 470 | 283 | 9 | 9 | 465 | 44 | 492 | 1.45e-77 | 250 |
| Msa0641960 | MtrunA17_Chr7g0227281 | 34.615 | 442 | 252 | 12 | 36 | 465 | 79 | 495 | 1.77e-77 | 250 |
| Msa0641960 | MtrunA17_Chr6g0449361 | 31.646 | 474 | 279 | 13 | 12 | 464 | 54 | 503 | 5.74e-77 | 249 |
| Msa0641960 | MtrunA17_Chr7g0227291 | 34.921 | 441 | 252 | 11 | 36 | 465 | 79 | 495 | 1.04e-76 | 248 |
| Msa0641960 | MtrunA17_Chr4g0004481 | 35.092 | 436 | 250 | 12 | 36 | 461 | 77 | 489 | 1.19e-76 | 248 |
| Msa0641960 | MtrunA17_Chr6g0449351 | 31.757 | 444 | 261 | 10 | 35 | 461 | 42 | 460 | 1.56e-76 | 247 |
| Msa0641960 | MtrunA17_Chr1g0163281 | 33.703 | 451 | 249 | 11 | 36 | 464 | 97 | 519 | 3.98e-76 | 247 |
| Msa0641960 | MtrunA17_Chr6g0449341 | 32.645 | 484 | 272 | 12 | 12 | 464 | 103 | 563 | 1.35e-74 | 244 |
| Msa0641960 | MtrunA17_Chr1g0163501 | 33.784 | 444 | 261 | 11 | 35 | 465 | 77 | 500 | 1.35e-73 | 240 |
| Msa0641960 | MtrunA17_Chr1g0163351 | 32.985 | 479 | 277 | 14 | 9 | 464 | 48 | 505 | 2.71e-73 | 239 |
| Msa0641960 | MtrunA17_Chr1g0163491 | 32.990 | 485 | 263 | 14 | 12 | 464 | 67 | 521 | 9.60e-73 | 238 |
| Msa0641960 | MtrunA17_Chr1g0163511 | 32.172 | 488 | 275 | 14 | 9 | 464 | 55 | 518 | 1.41e-72 | 238 |
| Msa0641960 | MtrunA17_Chr1g0163391 | 33.755 | 474 | 273 | 15 | 12 | 465 | 51 | 503 | 2.05e-72 | 237 |
| Msa0641960 | MtrunA17_Chr1g0163421 | 33.333 | 450 | 257 | 13 | 37 | 465 | 114 | 541 | 2.77e-70 | 232 |
| Msa0641960 | MtrunA17_Chr1g0171041 | 34.346 | 428 | 231 | 13 | 36 | 437 | 78 | 481 | 9.83e-70 | 230 |
| Msa0641960 | MtrunA17_Chr1g0163461 | 32.680 | 459 | 248 | 15 | 37 | 465 | 93 | 520 | 2.18e-68 | 227 |
| Msa0641960 | MtrunA17_Chr1g0163451 | 32.527 | 455 | 246 | 15 | 41 | 465 | 102 | 525 | 3.64e-68 | 226 |
| Msa0641960 | MtrunA17_Chr1g0163401 | 32.653 | 490 | 271 | 18 | 9 | 464 | 48 | 512 | 7.27e-66 | 220 |
| Msa0641960 | MtrunA17_Chr1g0164351 | 37.047 | 359 | 185 | 9 | 9 | 344 | 83 | 423 | 1.94e-65 | 216 |
| Msa0641960 | MtrunA17_Chr1g0183611 | 33.894 | 416 | 238 | 10 | 41 | 437 | 2 | 399 | 5.03e-65 | 215 |
| Msa0641960 | MtrunA17_Chr1g0163211 | 30.453 | 486 | 272 | 14 | 9 | 464 | 52 | 501 | 2.15e-63 | 213 |
| Msa0641960 | MtrunA17_Chr1g0163431 | 32.593 | 405 | 222 | 10 | 36 | 417 | 42 | 418 | 3.18e-59 | 200 |
| Msa0641960 | MtrunA17_Chr2g0308941 | 45.455 | 209 | 87 | 2 | 22 | 219 | 3 | 195 | 1.87e-54 | 181 |
| Msa0641960 | MtrunA17_Chr1g0204241 | 33.230 | 322 | 179 | 7 | 151 | 464 | 4 | 297 | 3.13e-54 | 183 |
| Msa0641960 | MtrunA17_Chr5g0403451 | 38.735 | 253 | 126 | 5 | 241 | 465 | 29 | 280 | 4.19e-51 | 174 |
| Msa0641960 | MtrunA17_Chr1g0163371 | 40.187 | 214 | 121 | 4 | 256 | 464 | 11 | 222 | 5.83e-46 | 159 |
| Msa0641960 | MtrunA17_Chr5g0403441 | 36.052 | 233 | 125 | 7 | 12 | 243 | 64 | 273 | 4.16e-37 | 138 |
| Msa0641960 | MtrunA17_Chr2g0309311 | 42.353 | 170 | 72 | 1 | 243 | 412 | 16 | 159 | 8.71e-37 | 134 |
| Msa0641960 | MtrunA17_Chr0c19g0493771 | 27.171 | 449 | 275 | 17 | 35 | 464 | 233 | 648 | 4.89e-32 | 129 |
| Msa0641960 | MtrunA17_Chr2g0308951 | 45.299 | 117 | 48 | 1 | 103 | 219 | 1 | 101 | 3.26e-27 | 105 |
| Msa0641960 | MtrunA17_Chr6g0457421 | 25.729 | 377 | 242 | 8 | 66 | 436 | 136 | 480 | 6.26e-27 | 113 |
| Msa0641960 | MtrunA17_Chr3g0128461 | 25.508 | 443 | 272 | 12 | 10 | 432 | 89 | 493 | 1.20e-26 | 112 |
| Msa0641960 | MtrunA17_Chr7g0215181 | 25.199 | 377 | 242 | 9 | 67 | 436 | 139 | 482 | 4.23e-26 | 110 |
| Msa0641960 | MtrunA17_Chr5g0396521 | 23.579 | 475 | 298 | 14 | 35 | 465 | 118 | 571 | 7.86e-26 | 110 |
| Msa0641960 | MtrunA17_Chr8g0357121 | 46.465 | 99 | 53 | 0 | 339 | 437 | 26 | 124 | 1.29e-25 | 101 |
| Msa0641960 | MtrunA17_Chr7g0235261 | 26.420 | 405 | 250 | 11 | 43 | 434 | 112 | 481 | 1.21e-24 | 106 |
| Msa0641960 | MtrunA17_Chr7g0248991 | 27.049 | 366 | 217 | 16 | 43 | 391 | 23 | 355 | 1.39e-24 | 104 |
| Msa0641960 | MtrunA17_Chr1g0164341 | 47.000 | 100 | 49 | 3 | 368 | 465 | 1 | 98 | 5.22e-24 | 96.3 |
| Msa0641960 | MtrunA17_Chr4g0004601 | 23.991 | 446 | 290 | 12 | 2 | 434 | 93 | 502 | 4.32e-23 | 102 |
| Msa0641960 | MtrunA17_Chr8g0357111 | 35.366 | 164 | 89 | 1 | 7 | 170 | 54 | 200 | 1.22e-22 | 95.5 |
| Msa0641960 | MtrunA17_Chr1g0163361 | 30.208 | 192 | 97 | 4 | 36 | 216 | 96 | 261 | 2.22e-22 | 97.1 |
| Msa0641960 | MtrunA17_Chr4g0030711 | 30.213 | 235 | 142 | 7 | 236 | 451 | 276 | 507 | 5.95e-22 | 98.6 |
| Msa0641960 | MtrunA17_Chr6g0484811 | 24.661 | 442 | 268 | 15 | 19 | 433 | 67 | 470 | 8.42e-22 | 98.2 |
| Msa0641960 | MtrunA17_Chr6g0484841 | 24.429 | 438 | 271 | 15 | 20 | 433 | 68 | 469 | 9.39e-22 | 97.8 |
| Msa0641960 | MtrunA17_Chr8g0354531 | 23.944 | 426 | 265 | 15 | 34 | 440 | 236 | 621 | 9.46e-22 | 98.6 |
| Msa0641960 | MtrunA17_Chr2g0308651 | 26.961 | 408 | 233 | 14 | 63 | 440 | 19 | 391 | 1.07e-21 | 97.1 |
| Msa0641960 | MtrunA17_Chr8g0362731 | 26.500 | 400 | 255 | 11 | 42 | 432 | 8 | 377 | 1.35e-21 | 96.7 |
| Msa0641960 | MtrunA17_Chr6g0451691 | 28.512 | 242 | 155 | 7 | 208 | 434 | 257 | 495 | 4.26e-21 | 96.3 |
| Msa0641960 | MtrunA17_Chr2g0310381 | 23.922 | 464 | 289 | 13 | 19 | 458 | 58 | 481 | 9.50e-21 | 94.7 |
| Msa0641960 | MtrunA17_Chr2g0310391 | 22.993 | 461 | 297 | 12 | 19 | 458 | 58 | 481 | 2.18e-20 | 93.6 |
| Msa0641960 | MtrunA17_Chr8g0354511 | 24.413 | 426 | 266 | 15 | 33 | 440 | 113 | 500 | 2.64e-20 | 93.6 |
| Msa0641960 | MtrunA17_Chr8g0354571 | 23.294 | 425 | 268 | 15 | 35 | 440 | 115 | 500 | 3.19e-20 | 93.2 |
| Msa0641960 | MtrunA17_Chr1g0164331 | 45.833 | 96 | 50 | 2 | 344 | 437 | 1 | 96 | 3.29e-20 | 87.0 |
| Msa0641960 | MtrunA17_Chr1g0179811 | 23.543 | 446 | 296 | 12 | 35 | 464 | 123 | 539 | 4.31e-20 | 93.2 |
| Msa0641960 | MtrunA17_Chr6g0451681 | 28.169 | 213 | 143 | 4 | 235 | 439 | 239 | 449 | 5.09e-20 | 92.4 |
| Msa0641960 | MtrunA17_Chr4g0008101 | 23.747 | 379 | 260 | 10 | 72 | 434 | 126 | 491 | 7.14e-20 | 92.4 |
| Msa0641960 | MtrunA17_Chr8g0382901 | 24.074 | 432 | 276 | 12 | 19 | 441 | 58 | 446 | 1.80e-19 | 91.7 |
| Msa0641960 | MtrunA17_Chr8g0382901 | 24.312 | 436 | 285 | 10 | 19 | 441 | 522 | 925 | 6.75e-19 | 90.1 |
| Msa0641960 | MtrunA17_Chr4g0030701 | 27.309 | 249 | 155 | 7 | 226 | 451 | 259 | 504 | 2.23e-19 | 90.9 |
| Msa0641960 | MtrunA17_Chr2g0280011 | 32.597 | 181 | 115 | 3 | 262 | 436 | 3 | 182 | 2.32e-19 | 86.7 |
| Msa0641960 | MtrunA17_Chr1g0205361 | 30.222 | 225 | 144 | 5 | 222 | 438 | 248 | 467 | 3.52e-19 | 90.1 |
| Msa0641960 | MtrunA17_Chr1g0207841 | 29.557 | 203 | 130 | 5 | 259 | 451 | 307 | 506 | 1.97e-18 | 87.8 |
| Msa0641960 | MtrunA17_Chr2g0308931 | 38.393 | 112 | 53 | 1 | 43 | 154 | 3 | 98 | 2.05e-18 | 81.6 |
| Msa0641960 | MtrunA17_Chr3g0101731 | 23.278 | 421 | 276 | 14 | 35 | 440 | 83 | 471 | 3.86e-18 | 87.0 |
| Msa0641960 | MtrunA17_Chr6g0466941 | 24.797 | 246 | 170 | 6 | 203 | 434 | 241 | 485 | 6.06e-18 | 86.3 |
| Msa0641960 | MtrunA17_Chr4g0046321 | 25.843 | 267 | 174 | 6 | 197 | 442 | 217 | 480 | 6.23e-18 | 86.3 |
| Msa0641960 | MtrunA17_Chr2g0280061 | 32.044 | 181 | 116 | 3 | 262 | 436 | 3 | 182 | 6.65e-18 | 82.4 |
| Msa0641960 | MtrunA17_Chr4g0058211 | 30.890 | 191 | 125 | 4 | 252 | 438 | 1 | 188 | 6.74e-18 | 82.4 |
| Msa0641960 | MtrunA17_Chr2g0280081 | 32.979 | 188 | 118 | 4 | 255 | 436 | 790 | 975 | 8.71e-18 | 86.7 |
| Msa0641960 | MtrunA17_Chr2g0280081 | 34.091 | 176 | 109 | 3 | 267 | 436 | 300 | 474 | 6.70e-17 | 84.0 |
| Msa0641960 | MtrunA17_Chr6g0466901 | 22.074 | 376 | 260 | 10 | 76 | 434 | 125 | 484 | 9.81e-18 | 85.9 |
| Msa0641960 | MtrunA17_Chr6g0451741 | 26.939 | 245 | 163 | 7 | 204 | 434 | 271 | 513 | 1.76e-17 | 85.1 |
| Msa0641960 | MtrunA17_Chr2g0313771 | 23.380 | 432 | 264 | 15 | 32 | 440 | 112 | 499 | 1.82e-17 | 84.7 |
| Msa0641960 | MtrunA17_Chr8g0387101 | 30.894 | 246 | 158 | 6 | 202 | 437 | 234 | 477 | 2.13e-17 | 84.7 |
| Msa0641960 | MtrunA17_Chr2g0314731 | 25.806 | 217 | 153 | 4 | 223 | 433 | 248 | 462 | 2.56e-17 | 84.3 |
| Msa0641960 | MtrunA17_Chr4g0058191 | 23.923 | 418 | 276 | 13 | 35 | 438 | 71 | 460 | 3.31e-17 | 84.0 |
| Msa0641960 | MtrunA17_Chr5g0430071 | 26.556 | 241 | 158 | 6 | 208 | 433 | 86 | 322 | 5.34e-17 | 82.4 |
| Msa0641960 | MtrunA17_Chr8g0364081 | 24.257 | 404 | 245 | 11 | 66 | 440 | 146 | 517 | 7.10e-17 | 83.2 |
| Msa0641960 | MtrunA17_Chr4g0039901 | 27.854 | 219 | 148 | 5 | 222 | 433 | 249 | 464 | 7.35e-17 | 82.8 |
| Msa0641960 | MtrunA17_Chr6g0463801 | 24.356 | 427 | 279 | 14 | 19 | 433 | 68 | 462 | 8.16e-17 | 82.8 |
| Msa0641960 | MtrunA17_Chr2g0280071 | 31.461 | 178 | 115 | 3 | 262 | 433 | 328 | 504 | 9.62e-17 | 83.2 |
| Msa0641960 | MtrunA17_Chr3g0101631 | 24.153 | 443 | 274 | 15 | 19 | 441 | 67 | 467 | 1.01e-16 | 82.4 |
| Msa0641960 | MtrunA17_Chr7g0224561 | 25.806 | 279 | 170 | 9 | 192 | 442 | 207 | 476 | 1.02e-16 | 82.4 |
| Msa0641960 | MtrunA17_Chr4g0046351 | 25.279 | 269 | 173 | 9 | 197 | 442 | 217 | 480 | 1.13e-16 | 82.4 |
| Msa0641960 | MtrunA17_Chr1g0197871 | 29.778 | 225 | 146 | 7 | 227 | 444 | 251 | 470 | 1.19e-16 | 82.4 |
| Msa0641960 | MtrunA17_Chr1g0205371 | 31.356 | 236 | 145 | 6 | 211 | 438 | 242 | 468 | 1.51e-16 | 82.0 |
| Msa0641960 | MtrunA17_Chr5g0431641 | 22.757 | 457 | 306 | 12 | 7 | 453 | 64 | 483 | 1.70e-16 | 81.6 |
| Msa0641960 | MtrunA17_Chr1g0197891 | 29.778 | 225 | 146 | 7 | 227 | 444 | 251 | 470 | 1.85e-16 | 81.6 |
| Msa0641960 | MtrunA17_Chr7g0255531 | 25.079 | 315 | 210 | 9 | 130 | 432 | 160 | 460 | 2.24e-16 | 81.6 |
| Msa0641960 | MtrunA17_Chr1g0203141 | 23.902 | 410 | 256 | 15 | 66 | 459 | 141 | 510 | 2.35e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr1g0197851 | 29.333 | 225 | 147 | 7 | 227 | 444 | 251 | 470 | 2.38e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr1g0197881 | 29.333 | 225 | 147 | 7 | 227 | 444 | 250 | 469 | 2.42e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr5g0405001 | 27.386 | 241 | 148 | 8 | 211 | 432 | 245 | 477 | 2.52e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr5g0430081 | 28.333 | 180 | 124 | 2 | 256 | 433 | 291 | 467 | 2.62e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr7g0224551 | 25.448 | 279 | 171 | 9 | 192 | 442 | 207 | 476 | 2.97e-16 | 81.3 |
| Msa0641960 | MtrunA17_Chr6g0451771 | 29.189 | 185 | 127 | 3 | 252 | 434 | 7 | 189 | 2.99e-16 | 77.8 |
| Msa0641960 | MtrunA17_Chr8g0390881 | 26.360 | 239 | 160 | 5 | 208 | 432 | 232 | 468 | 3.28e-16 | 80.9 |
| Msa0641960 | MtrunA17_Chr8g0390871 | 28.814 | 177 | 124 | 2 | 256 | 432 | 16 | 190 | 4.24e-16 | 77.4 |
| Msa0641960 | MtrunA17_Chr4g0046331 | 24.815 | 270 | 173 | 8 | 198 | 442 | 218 | 482 | 4.93e-16 | 80.5 |
| Msa0641960 | MtrunA17_Chr8g0381541 | 24.550 | 444 | 263 | 18 | 17 | 440 | 76 | 467 | 6.25e-16 | 80.1 |
| Msa0641960 | MtrunA17_Chr5g0430131 | 21.519 | 237 | 174 | 2 | 208 | 433 | 233 | 468 | 6.94e-16 | 80.1 |
| Msa0641960 | MtrunA17_Chr2g0280121 | 33.523 | 176 | 110 | 3 | 267 | 436 | 306 | 480 | 7.13e-16 | 80.1 |
| Msa0641960 | MtrunA17_Chr4g0058231 | 22.321 | 448 | 280 | 12 | 22 | 438 | 61 | 471 | 8.99e-16 | 79.7 |
| Msa0641960 | MtrunA17_Chr2g0313781 | 21.343 | 417 | 282 | 12 | 37 | 433 | 108 | 498 | 1.06e-15 | 79.3 |
| Msa0641960 | MtrunA17_Chr5g0431511 | 31.351 | 185 | 107 | 5 | 258 | 433 | 294 | 467 | 1.14e-15 | 79.3 |
| Msa0641960 | MtrunA17_Chr1g0160861 | 26.360 | 239 | 163 | 5 | 208 | 438 | 75 | 308 | 1.30e-15 | 77.8 |
| Msa0641960 | MtrunA17_Chr5g0395321 | 26.364 | 220 | 156 | 4 | 219 | 436 | 250 | 465 | 1.40e-15 | 79.0 |
| Msa0641960 | MtrunA17_Chr4g0063221 | 25.000 | 464 | 279 | 17 | 5 | 442 | 78 | 498 | 1.54e-15 | 79.0 |
| Msa0641960 | MtrunA17_Chr8g0381571 | 25.412 | 425 | 245 | 18 | 17 | 421 | 76 | 448 | 1.77e-15 | 78.6 |
| Msa0641960 | MtrunA17_Chr1g0164211 | 28.194 | 227 | 152 | 6 | 217 | 438 | 244 | 464 | 2.11e-15 | 78.6 |
| Msa0641960 | MtrunA17_Chr2g0313821 | 21.687 | 415 | 269 | 12 | 37 | 432 | 108 | 485 | 2.16e-15 | 78.6 |
| Msa0641960 | MtrunA17_Chr1g0160851 | 26.496 | 234 | 159 | 5 | 211 | 438 | 241 | 467 | 3.04e-15 | 77.8 |
| Msa0641960 | MtrunA17_Chr4g0047691 | 26.496 | 234 | 164 | 3 | 209 | 436 | 252 | 483 | 3.22e-15 | 77.8 |
| Msa0641960 | MtrunA17_Chr4g0058201 | 25.210 | 238 | 171 | 4 | 205 | 438 | 228 | 462 | 3.47e-15 | 77.8 |
| Msa0641960 | MtrunA17_Chr8g0369791 | 27.925 | 265 | 164 | 8 | 217 | 464 | 211 | 465 | 3.70e-15 | 77.4 |
| Msa0641960 | MtrunA17_Chr4g0035921 | 24.609 | 447 | 253 | 18 | 24 | 432 | 77 | 477 | 5.12e-15 | 77.4 |
| Msa0641960 | MtrunA17_Chr7g0258211 | 22.633 | 433 | 277 | 14 | 35 | 441 | 85 | 485 | 7.29e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr5g0431671 | 23.502 | 434 | 291 | 11 | 35 | 459 | 87 | 488 | 7.91e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr6g0472311 | 31.844 | 179 | 118 | 3 | 256 | 433 | 306 | 481 | 8.28e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr6g0472221 | 21.078 | 408 | 272 | 12 | 66 | 459 | 150 | 521 | 8.50e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr2g0314721 | 24.786 | 234 | 164 | 5 | 209 | 436 | 249 | 476 | 8.66e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr8g0346261 | 28.634 | 227 | 148 | 9 | 215 | 433 | 292 | 512 | 8.78e-15 | 76.6 |
| Msa0641960 | MtrunA17_Chr4g0011981 | 26.020 | 196 | 139 | 3 | 259 | 450 | 289 | 482 | 1.05e-14 | 76.3 |
| Msa0641960 | MtrunA17_Chr5g0395381 | 25.561 | 223 | 154 | 5 | 219 | 436 | 225 | 440 | 1.37e-14 | 75.9 |
| Msa0641960 | MtrunA17_Chr8g0356001 | 26.721 | 247 | 163 | 7 | 199 | 433 | 231 | 471 | 1.37e-14 | 75.9 |
| Msa0641960 | MtrunA17_Chr5g0445441 | 25.877 | 228 | 158 | 4 | 220 | 440 | 288 | 511 | 1.51e-14 | 75.9 |
| Msa0641960 | MtrunA17_Chr3g0141801 | 25.177 | 282 | 184 | 8 | 191 | 461 | 216 | 481 | 1.59e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr7g0246221 | 29.825 | 171 | 118 | 2 | 263 | 433 | 300 | 468 | 1.74e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr2g0280041 | 30.387 | 181 | 119 | 3 | 262 | 436 | 327 | 506 | 1.77e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr8g0380471 | 25.723 | 311 | 196 | 12 | 165 | 461 | 184 | 473 | 1.96e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr7g0246131 | 26.736 | 288 | 181 | 8 | 173 | 433 | 185 | 469 | 2.08e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr4g0014051 | 26.641 | 259 | 167 | 6 | 203 | 450 | 260 | 506 | 2.09e-14 | 75.5 |
| Msa0641960 | MtrunA17_Chr2g0314781 | 29.139 | 151 | 105 | 2 | 286 | 436 | 4 | 152 | 2.10e-14 | 71.2 |
| Msa0641960 | MtrunA17_Chr2g0310351 | 30.286 | 175 | 118 | 3 | 267 | 441 | 1 | 171 | 2.28e-14 | 71.6 |
| Msa0641960 | MtrunA17_Chr5g0413911 | 28.421 | 190 | 131 | 3 | 256 | 441 | 316 | 504 | 2.31e-14 | 75.1 |
| Msa0641960 | MtrunA17_Chr1g0174481 | 23.697 | 422 | 275 | 14 | 35 | 438 | 80 | 472 | 2.53e-14 | 75.1 |
| Msa0641960 | MtrunA17_Chr5g0395331 | 26.147 | 218 | 153 | 4 | 225 | 436 | 257 | 472 | 2.66e-14 | 75.1 |
| Msa0641960 | MtrunA17_Chr8g0361471 | 25.000 | 428 | 262 | 18 | 35 | 440 | 81 | 471 | 2.68e-14 | 75.1 |
| Msa0641960 | MtrunA17_Chr3g0101611 | 22.246 | 463 | 300 | 14 | 19 | 460 | 68 | 491 | 2.92e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr5g0445421 | 29.500 | 200 | 131 | 4 | 257 | 453 | 344 | 536 | 3.23e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr1g0203151 | 25.279 | 269 | 179 | 10 | 203 | 459 | 248 | 506 | 3.24e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr5g0408181 | 28.352 | 261 | 161 | 8 | 215 | 464 | 218 | 463 | 3.37e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr5g0445531 | 24.888 | 446 | 269 | 14 | 35 | 459 | 86 | 486 | 3.51e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr3g0094231 | 28.502 | 207 | 128 | 7 | 248 | 440 | 272 | 472 | 3.52e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr1g0193811 | 21.315 | 441 | 295 | 12 | 37 | 461 | 109 | 513 | 3.65e-14 | 74.7 |
| Msa0641960 | MtrunA17_Chr4g0046681 | 30.409 | 171 | 115 | 3 | 266 | 434 | 30 | 198 | 4.75e-14 | 71.6 |
| Msa0641960 | MtrunA17_Chr3g0101701 | 25.431 | 232 | 154 | 6 | 218 | 438 | 252 | 475 | 5.53e-14 | 73.9 |
| Msa0641960 | MtrunA17_Chr4g0020041 | 21.935 | 465 | 291 | 16 | 10 | 440 | 46 | 472 | 6.23e-14 | 73.9 |
| Msa0641960 | MtrunA17_Chr4g0024771 | 23.831 | 449 | 293 | 13 | 19 | 453 | 70 | 483 | 6.85e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr1g0156101 | 23.718 | 312 | 218 | 9 | 142 | 436 | 171 | 479 | 7.23e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr4g0047661 | 26.360 | 239 | 167 | 4 | 205 | 436 | 249 | 485 | 7.74e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr4g0046631 | 24.775 | 444 | 285 | 17 | 9 | 434 | 74 | 486 | 8.62e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr5g0409051 | 30.769 | 208 | 136 | 6 | 229 | 432 | 272 | 475 | 8.71e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr5g0445381 | 23.851 | 457 | 305 | 13 | 5 | 453 | 93 | 514 | 8.89e-14 | 73.6 |
| Msa0641960 | MtrunA17_Chr4g0011961 | 24.747 | 198 | 141 | 4 | 258 | 450 | 287 | 481 | 1.19e-13 | 72.8 |
| Msa0641960 | MtrunA17_Chr5g0431591 | 23.077 | 260 | 186 | 5 | 208 | 459 | 52 | 305 | 1.27e-13 | 71.6 |
| Msa0641960 | MtrunA17_Chr7g0246121 | 27.650 | 217 | 141 | 6 | 227 | 433 | 255 | 465 | 1.36e-13 | 72.8 |
| Msa0641960 | MtrunA17_Chr3g0101711 | 26.724 | 232 | 153 | 7 | 218 | 440 | 251 | 474 | 1.50e-13 | 72.8 |
| Msa0641960 | MtrunA17_Chr3g0107511 | 24.405 | 336 | 206 | 13 | 146 | 464 | 173 | 477 | 2.49e-13 | 72.0 |
| Msa0641960 | MtrunA17_Chr2g0307291 | 24.180 | 244 | 167 | 7 | 203 | 432 | 248 | 487 | 3.10e-13 | 71.6 |
| Msa0641960 | MtrunA17_Chr4g0047641 | 25.726 | 241 | 163 | 6 | 208 | 436 | 248 | 484 | 3.30e-13 | 71.6 |
| Msa0641960 | MtrunA17_Chr1g0184481 | 46.377 | 69 | 35 | 2 | 398 | 464 | 3 | 71 | 3.46e-13 | 64.7 |
| Msa0641960 | MtrunA17_Chr5g0430041 | 30.172 | 116 | 81 | 0 | 318 | 433 | 25 | 140 | 3.60e-13 | 67.8 |
| Msa0641960 | MtrunA17_Chr2g0307301 | 24.812 | 266 | 179 | 8 | 203 | 454 | 248 | 506 | 3.61e-13 | 71.6 |
| Msa0641960 | MtrunA17_Chr4g0058281 | 26.400 | 250 | 166 | 7 | 208 | 444 | 245 | 489 | 3.84e-13 | 71.2 |
| Msa0641960 | MtrunA17_Chr3g0101691 | 26.446 | 242 | 160 | 6 | 211 | 440 | 240 | 475 | 4.82e-13 | 71.2 |
| Msa0641960 | MtrunA17_Chr8g0351801 | 27.064 | 218 | 136 | 6 | 237 | 436 | 274 | 486 | 5.00e-13 | 71.2 |
| Msa0641960 | MtrunA17_Chr3g0116681 | 24.569 | 232 | 166 | 4 | 208 | 433 | 240 | 468 | 6.44e-13 | 70.9 |
| Msa0641960 | MtrunA17_Chr6g0458561 | 23.077 | 234 | 168 | 5 | 211 | 436 | 268 | 497 | 6.57e-13 | 70.9 |
| Msa0641960 | MtrunA17_Chr3g0107501 | 26.866 | 268 | 170 | 10 | 211 | 464 | 222 | 477 | 7.03e-13 | 70.5 |
| Msa0641960 | MtrunA17_Chr5g0445451 | 23.810 | 252 | 175 | 5 | 212 | 453 | 239 | 483 | 7.05e-13 | 70.5 |
| Msa0641960 | MtrunA17_Chr8g0377341 | 22.931 | 423 | 278 | 14 | 34 | 443 | 114 | 501 | 7.20e-13 | 70.5 |
| Msa0641960 | MtrunA17_Chr3g0086661 | 29.213 | 178 | 120 | 3 | 260 | 433 | 296 | 471 | 7.39e-13 | 70.5 |
| Msa0641960 | MtrunA17_Chr8g0364651 | 29.255 | 188 | 128 | 4 | 256 | 439 | 285 | 471 | 8.59e-13 | 70.1 |
| Msa0641960 | MtrunA17_Chr8g0354541 | 27.500 | 160 | 106 | 4 | 284 | 440 | 2 | 154 | 8.86e-13 | 66.6 |
| Msa0641960 | MtrunA17_Chr1g0154731 | 23.052 | 308 | 218 | 5 | 133 | 436 | 184 | 476 | 1.06e-12 | 70.1 |
| Msa0641960 | MtrunA17_Chr1g0153371 | 28.571 | 252 | 148 | 9 | 211 | 447 | 220 | 454 | 1.11e-12 | 69.7 |
| Msa0641960 | MtrunA17_Chr3g0084921 | 23.385 | 449 | 280 | 18 | 34 | 450 | 80 | 496 | 1.52e-12 | 69.7 |
| Msa0641960 | MtrunA17_Chr6g0466331 | 27.679 | 224 | 137 | 8 | 231 | 440 | 259 | 471 | 1.70e-12 | 69.3 |
| Msa0641960 | MtrunA17_Chr5g0430101 | 22.624 | 221 | 155 | 3 | 226 | 433 | 249 | 466 | 1.76e-12 | 69.3 |
| Msa0641960 | MtrunA17_Chr6g0465511 | 27.679 | 224 | 137 | 8 | 231 | 440 | 259 | 471 | 1.77e-12 | 69.3 |
| Msa0641960 | MtrunA17_Chr8g0372251 | 23.041 | 434 | 279 | 16 | 8 | 415 | 48 | 452 | 2.00e-12 | 69.3 |
| Msa0641960 | MtrunA17_Chr1g0200961 | 26.337 | 243 | 167 | 4 | 201 | 433 | 222 | 462 | 2.44e-12 | 68.9 |
| Msa0641960 | MtrunA17_Chr5g0401691 | 28.022 | 182 | 126 | 5 | 257 | 438 | 304 | 480 | 3.06e-12 | 68.6 |
| Msa0641960 | MtrunA17_Chr4g0047631 | 25.630 | 238 | 169 | 3 | 205 | 436 | 245 | 480 | 3.63e-12 | 68.6 |
| Msa0641960 | MtrunA17_Chr5g0443731 | 25.630 | 238 | 163 | 7 | 211 | 440 | 219 | 450 | 3.76e-12 | 68.2 |
| Msa0641960 | MtrunA17_Chr5g0445461 | 26.556 | 241 | 170 | 5 | 219 | 459 | 254 | 487 | 3.99e-12 | 68.2 |
| Msa0641960 | MtrunA17_Chr5g0430151 | 27.350 | 117 | 85 | 0 | 317 | 433 | 24 | 140 | 4.14e-12 | 64.7 |
| Msa0641960 | MtrunA17_Chr3g0135841 | 25.095 | 263 | 158 | 9 | 225 | 465 | 292 | 537 | 4.21e-12 | 68.2 |
| Msa0641960 | MtrunA17_Chr3g0101821 | 22.633 | 433 | 291 | 14 | 19 | 436 | 66 | 469 | 4.45e-12 | 68.2 |
| Msa0641960 | MtrunA17_Chr3g0086651 | 28.652 | 178 | 121 | 3 | 260 | 433 | 296 | 471 | 4.85e-12 | 67.8 |
| Msa0641960 | MtrunA17_Chr4g0011851 | 25.243 | 206 | 146 | 4 | 257 | 457 | 6 | 208 | 6.19e-12 | 65.1 |
| Msa0641960 | MtrunA17_Chr2g0293421 | 25.532 | 235 | 149 | 8 | 227 | 447 | 251 | 473 | 6.46e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr7g0218611 | 25.843 | 178 | 127 | 4 | 257 | 433 | 292 | 465 | 6.65e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr3g0078411 | 25.847 | 236 | 162 | 6 | 215 | 445 | 221 | 448 | 6.81e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr5g0430031 | 24.444 | 180 | 131 | 2 | 256 | 433 | 293 | 469 | 6.92e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr6g0455461 | 25.847 | 236 | 162 | 6 | 215 | 445 | 221 | 448 | 7.18e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr5g0430091 | 22.500 | 240 | 169 | 4 | 208 | 433 | 233 | 469 | 7.41e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr1g0151221 | 24.904 | 261 | 161 | 11 | 225 | 465 | 284 | 529 | 7.86e-12 | 67.4 |
| Msa0641960 | MtrunA17_Chr5g0403321 | 25.170 | 441 | 254 | 17 | 28 | 433 | 72 | 471 | 9.17e-12 | 67.0 |
| Msa0641960 | MtrunA17_Chr3g0101661 | 26.754 | 228 | 153 | 7 | 219 | 438 | 253 | 474 | 9.69e-12 | 67.0 |
| Msa0641960 | MtrunA17_Chr5g0403931 | 22.034 | 354 | 234 | 13 | 122 | 461 | 152 | 477 | 1.25e-11 | 66.6 |
| Msa0641960 | MtrunA17_Chr8g0351411 | 54.348 | 46 | 21 | 0 | 368 | 413 | 1 | 46 | 1.37e-11 | 59.3 |
| Msa0641960 | MtrunA17_Chr5g0403331 | 22.991 | 448 | 280 | 13 | 19 | 441 | 68 | 475 | 1.71e-11 | 66.2 |
| Msa0641960 | MtrunA17_Chr7g0254641 | 26.141 | 241 | 161 | 7 | 208 | 433 | 241 | 479 | 1.84e-11 | 66.2 |
| Msa0641960 | MtrunA17_Chr5g0431501 | 22.961 | 331 | 223 | 10 | 121 | 433 | 151 | 467 | 1.89e-11 | 66.2 |
| Msa0641960 | MtrunA17_Chr5g0431461 | 22.961 | 331 | 223 | 10 | 121 | 433 | 151 | 467 | 1.89e-11 | 66.2 |
| Msa0641960 | MtrunA17_Chr2g0293411 | 24.701 | 251 | 162 | 8 | 211 | 447 | 235 | 472 | 1.91e-11 | 65.9 |
| Msa0641960 | MtrunA17_Chr1g0174461 | 21.525 | 446 | 304 | 15 | 12 | 438 | 59 | 477 | 2.42e-11 | 65.9 |
| Msa0641960 | MtrunA17_Chr4g0044851 | 28.235 | 255 | 154 | 9 | 220 | 462 | 231 | 468 | 2.88e-11 | 65.5 |
| Msa0641960 | MtrunA17_Chr3g0101741 | 23.387 | 372 | 241 | 12 | 72 | 433 | 51 | 388 | 3.11e-11 | 65.1 |
| Msa0641960 | MtrunA17_Chr1g0174431 | 28.161 | 174 | 115 | 4 | 270 | 436 | 4 | 174 | 3.18e-11 | 62.8 |
| Msa0641960 | MtrunA17_Chr8g0339861 | 25.926 | 243 | 150 | 8 | 211 | 439 | 237 | 463 | 3.18e-11 | 65.5 |
| Msa0641960 | MtrunA17_Chr5g0430111 | 25.735 | 136 | 96 | 2 | 256 | 389 | 293 | 425 | 5.08e-11 | 64.3 |
| Msa0641960 | MtrunA17_Chr5g0401681 | 22.192 | 365 | 260 | 11 | 76 | 438 | 121 | 463 | 5.09e-11 | 64.7 |
| Msa0641960 | MtrunA17_Chr3g0107541 | 24.903 | 257 | 181 | 7 | 186 | 432 | 238 | 492 | 5.25e-11 | 64.7 |
| Msa0641960 | MtrunA17_Chr8g0355961 | 27.391 | 230 | 150 | 6 | 213 | 433 | 250 | 471 | 6.81e-11 | 64.3 |
| Msa0641960 | MtrunA17_Chr7g0218601 | 22.979 | 235 | 166 | 6 | 208 | 433 | 236 | 464 | 9.53e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641960 | AT2G27690.1 | 60.128 | 469 | 165 | 5 | 2 | 465 | 44 | 495 | 0.0 | 575 |
| Msa0641960 | AT3G48520.1 | 47.436 | 468 | 212 | 7 | 10 | 465 | 55 | 500 | 3.76e-139 | 409 |
| Msa0641960 | AT3G56630.1 | 44.850 | 466 | 231 | 6 | 10 | 465 | 50 | 499 | 1.32e-130 | 387 |
| Msa0641960 | AT5G63450.1 | 47.222 | 468 | 212 | 8 | 10 | 464 | 57 | 502 | 1.48e-130 | 387 |
| Msa0641960 | AT5G63450.2 | 47.222 | 468 | 212 | 8 | 10 | 464 | 115 | 560 | 6.41e-130 | 388 |
| Msa0641960 | AT1G34540.1 | 43.562 | 466 | 236 | 7 | 10 | 465 | 50 | 498 | 3.16e-127 | 379 |
| Msa0641960 | AT3G01900.1 | 41.595 | 464 | 238 | 7 | 10 | 464 | 51 | 490 | 7.56e-121 | 362 |
| Msa0641960 | AT5G23190.1 | 42.952 | 454 | 221 | 7 | 31 | 465 | 107 | 541 | 1.40e-119 | 361 |
| Msa0641960 | AT5G08250.1 | 41.048 | 458 | 225 | 7 | 30 | 465 | 45 | 479 | 3.54e-115 | 347 |
| Msa0641960 | AT5G08250.2 | 41.048 | 458 | 225 | 7 | 30 | 465 | 107 | 541 | 1.29e-114 | 348 |
| Msa0641960 | AT1G63710.1 | 40.315 | 444 | 234 | 8 | 34 | 464 | 82 | 507 | 8.44e-107 | 327 |
| Msa0641960 | AT2G45970.1 | 40.268 | 447 | 233 | 7 | 34 | 464 | 82 | 510 | 1.65e-104 | 322 |
| Msa0641960 | AT1G13140.1 | 38.938 | 452 | 235 | 8 | 35 | 465 | 94 | 525 | 8.53e-102 | 315 |
| Msa0641960 | AT1G01600.1 | 39.111 | 450 | 237 | 9 | 34 | 464 | 82 | 513 | 9.90e-102 | 315 |
| Msa0641960 | AT2G45510.1 | 39.112 | 473 | 251 | 9 | 10 | 465 | 57 | 509 | 1.61e-101 | 313 |
| Msa0641960 | AT4G00360.1 | 38.359 | 451 | 237 | 9 | 34 | 464 | 82 | 511 | 3.81e-101 | 313 |
| Msa0641960 | AT1G24540.1 | 39.556 | 450 | 232 | 7 | 35 | 464 | 91 | 520 | 6.19e-101 | 312 |
| Msa0641960 | AT1G69500.1 | 36.255 | 502 | 256 | 9 | 7 | 465 | 44 | 524 | 6.09e-99 | 307 |
| Msa0641960 | AT3G26125.1 | 38.043 | 460 | 236 | 8 | 35 | 465 | 94 | 533 | 1.95e-97 | 303 |
| Msa0641960 | AT1G13150.1 | 38.106 | 454 | 240 | 7 | 33 | 465 | 85 | 518 | 8.13e-97 | 301 |
| Msa0641960 | AT2G44890.1 | 38.055 | 473 | 256 | 9 | 10 | 465 | 57 | 509 | 1.29e-96 | 300 |
| Msa0641960 | AT5G58860.1 | 38.702 | 447 | 235 | 8 | 34 | 464 | 85 | 508 | 3.53e-95 | 296 |
| Msa0641960 | AT1G13140.2 | 38.085 | 449 | 217 | 8 | 35 | 465 | 94 | 499 | 1.49e-94 | 295 |
| Msa0641960 | AT2G23180.1 | 36.504 | 452 | 246 | 11 | 35 | 465 | 82 | 513 | 3.15e-92 | 289 |
| Msa0641960 | AT2G44890.2 | 36.596 | 470 | 249 | 9 | 10 | 465 | 57 | 491 | 9.58e-88 | 277 |
| Msa0641960 | AT4G39480.1 | 35.398 | 452 | 249 | 11 | 36 | 464 | 82 | 513 | 1.88e-87 | 277 |
| Msa0641960 | AT4G39490.1 | 34.430 | 456 | 253 | 10 | 35 | 464 | 81 | 516 | 2.68e-85 | 271 |
| Msa0641960 | AT2G21910.1 | 34.152 | 448 | 256 | 9 | 35 | 464 | 80 | 506 | 3.54e-83 | 265 |
| Msa0641960 | AT4G39500.1 | 34.978 | 446 | 254 | 8 | 35 | 464 | 41 | 466 | 1.89e-80 | 257 |
| Msa0641960 | AT4G39500.2 | 34.978 | 446 | 254 | 8 | 35 | 464 | 91 | 516 | 1.14e-79 | 256 |
| Msa0641960 | AT5G52320.1 | 32.340 | 470 | 277 | 13 | 10 | 461 | 53 | 499 | 7.64e-78 | 251 |
| Msa0641960 | AT5G52320.2 | 32.403 | 466 | 274 | 13 | 10 | 457 | 53 | 495 | 3.01e-77 | 249 |
| Msa0641960 | AT1G65340.1 | 32.506 | 443 | 259 | 10 | 35 | 461 | 82 | 500 | 4.17e-76 | 247 |
| Msa0641960 | AT4G32170.1 | 33.483 | 445 | 260 | 8 | 35 | 464 | 80 | 503 | 8.22e-76 | 246 |
| Msa0641960 | AT4G39510.1 | 34.228 | 447 | 256 | 11 | 35 | 464 | 80 | 505 | 1.03e-73 | 241 |
| Msa0641960 | AT1G47620.1 | 32.143 | 448 | 263 | 10 | 36 | 464 | 90 | 515 | 2.50e-72 | 238 |
| Msa0641960 | AT1G57750.1 | 31.900 | 442 | 261 | 9 | 36 | 464 | 82 | 496 | 8.05e-72 | 236 |
| Msa0641960 | AT5G02900.1 | 32.594 | 451 | 239 | 12 | 36 | 464 | 72 | 479 | 1.58e-67 | 224 |
| Msa0641960 | AT1G57750.2 | 32.240 | 366 | 212 | 6 | 36 | 390 | 82 | 422 | 1.46e-58 | 199 |
| Msa0641960 | AT1G31800.1 | 26.058 | 449 | 282 | 17 | 35 | 465 | 154 | 570 | 9.69e-27 | 114 |
| Msa0641960 | AT5G24910.1 | 25.393 | 445 | 279 | 12 | 9 | 432 | 89 | 501 | 1.85e-26 | 112 |
| Msa0641960 | AT4G15110.1 | 22.772 | 505 | 319 | 16 | 7 | 465 | 100 | 579 | 8.35e-26 | 110 |
| Msa0641960 | AT3G53130.1 | 25.778 | 450 | 281 | 16 | 35 | 464 | 123 | 539 | 1.24e-25 | 110 |
| Msa0641960 | AT4G13310.1 | 25.682 | 440 | 284 | 13 | 18 | 444 | 61 | 470 | 2.40e-24 | 105 |
| Msa0641960 | AT2G30770.1 | 30.400 | 250 | 167 | 3 | 208 | 453 | 233 | 479 | 1.80e-23 | 103 |
| Msa0641960 | AT4G13290.1 | 26.267 | 434 | 281 | 14 | 18 | 444 | 62 | 463 | 1.04e-22 | 101 |
| Msa0641960 | AT5G24900.1 | 25.503 | 447 | 275 | 18 | 9 | 432 | 85 | 496 | 1.07e-21 | 98.2 |
| Msa0641960 | AT2G30750.1 | 28.968 | 252 | 168 | 4 | 208 | 453 | 233 | 479 | 1.26e-20 | 94.7 |
| Msa0641960 | AT5G24900.2 | 25.791 | 411 | 252 | 16 | 42 | 432 | 2 | 379 | 3.39e-20 | 92.8 |
| Msa0641960 | AT1G11610.2 | 24.576 | 472 | 284 | 14 | 18 | 462 | 62 | 488 | 5.93e-20 | 92.8 |
| Msa0641960 | AT3G48270.1 | 30.270 | 185 | 128 | 1 | 260 | 444 | 281 | 464 | 7.87e-20 | 92.4 |
| Msa0641960 | AT5G52400.1 | 28.090 | 267 | 176 | 8 | 204 | 461 | 257 | 516 | 9.36e-20 | 92.4 |
| Msa0641960 | AT5G38450.1 | 24.485 | 388 | 241 | 9 | 65 | 436 | 138 | 489 | 5.15e-19 | 90.1 |
| Msa0641960 | AT1G11610.1 | 24.726 | 457 | 274 | 14 | 18 | 446 | 62 | 476 | 7.45e-19 | 89.4 |
| Msa0641960 | AT5G51900.1 | 29.167 | 288 | 125 | 11 | 199 | 465 | 11 | 240 | 1.23e-18 | 85.5 |
| Msa0641960 | AT3G61040.1 | 32.961 | 179 | 117 | 3 | 256 | 433 | 285 | 461 | 2.49e-18 | 87.8 |
| Msa0641960 | AT3G48300.1 | 23.110 | 463 | 302 | 15 | 13 | 461 | 55 | 477 | 4.59e-18 | 87.0 |
| Msa0641960 | AT3G48300.2 | 23.110 | 463 | 302 | 15 | 13 | 461 | 57 | 479 | 4.63e-18 | 87.0 |
| Msa0641960 | AT3G48310.1 | 26.222 | 225 | 159 | 2 | 218 | 436 | 234 | 457 | 4.93e-18 | 87.0 |
| Msa0641960 | AT2G26710.1 | 26.410 | 390 | 228 | 15 | 62 | 432 | 135 | 484 | 5.60e-18 | 87.0 |
| Msa0641960 | AT3G14640.1 | 24.703 | 421 | 253 | 18 | 34 | 432 | 105 | 483 | 5.80e-18 | 86.7 |
| Msa0641960 | AT3G14640.2 | 24.703 | 421 | 253 | 18 | 34 | 432 | 127 | 505 | 7.73e-18 | 86.7 |
| Msa0641960 | AT5G25140.1 | 24.408 | 422 | 268 | 14 | 33 | 436 | 73 | 461 | 9.06e-18 | 86.3 |
| Msa0641960 | AT1G67110.1 | 25.263 | 380 | 237 | 9 | 67 | 436 | 141 | 483 | 1.71e-17 | 85.5 |
| Msa0641960 | AT5G07990.1 | 28.745 | 247 | 153 | 7 | 208 | 438 | 233 | 472 | 1.22e-16 | 82.8 |
| Msa0641960 | AT3G48280.1 | 29.508 | 183 | 128 | 1 | 260 | 442 | 281 | 462 | 1.54e-16 | 82.4 |
| Msa0641960 | AT5G24950.1 | 26.190 | 252 | 174 | 3 | 208 | 449 | 232 | 481 | 2.14e-16 | 82.0 |
| Msa0641960 | AT1G64940.1 | 27.778 | 180 | 127 | 3 | 255 | 433 | 299 | 476 | 2.30e-16 | 82.0 |
| Msa0641960 | AT2G40890.1 | 31.937 | 191 | 122 | 4 | 248 | 432 | 271 | 459 | 2.65e-16 | 81.6 |
| Msa0641960 | AT3G25180.1 | 26.437 | 261 | 168 | 8 | 200 | 450 | 246 | 492 | 2.80e-16 | 81.6 |
| Msa0641960 | AT1G33730.1 | 29.218 | 243 | 157 | 6 | 208 | 440 | 104 | 341 | 6.67e-16 | 79.7 |
| Msa0641960 | AT1G33730.2 | 29.218 | 243 | 157 | 6 | 208 | 440 | 104 | 341 | 6.67e-16 | 79.7 |
| Msa0641960 | AT1G16410.1 | 25.081 | 307 | 191 | 10 | 184 | 454 | 234 | 537 | 7.37e-16 | 80.5 |
| Msa0641960 | AT3G14620.1 | 21.591 | 440 | 300 | 13 | 8 | 432 | 75 | 484 | 7.97e-16 | 80.1 |
| Msa0641960 | AT1G64950.1 | 28.804 | 184 | 128 | 3 | 255 | 437 | 298 | 479 | 8.68e-16 | 80.1 |
| Msa0641960 | AT4G37340.1 | 27.386 | 241 | 156 | 6 | 208 | 441 | 236 | 464 | 1.02e-15 | 79.7 |
| Msa0641960 | AT5G45340.1 | 28.846 | 260 | 158 | 8 | 210 | 461 | 219 | 459 | 1.32e-15 | 79.3 |
| Msa0641960 | AT4G19230.1 | 27.734 | 256 | 159 | 8 | 212 | 459 | 220 | 457 | 1.93e-15 | 79.0 |
| Msa0641960 | AT5G25120.1 | 23.598 | 428 | 286 | 12 | 19 | 433 | 59 | 458 | 5.30e-15 | 77.4 |
| Msa0641960 | AT2G45550.1 | 30.000 | 190 | 124 | 5 | 252 | 440 | 296 | 477 | 6.03e-15 | 77.4 |
| Msa0641960 | AT2G23190.1 | 28.270 | 237 | 148 | 6 | 210 | 438 | 283 | 505 | 9.39e-15 | 77.0 |
| Msa0641960 | AT2G46950.1 | 25.336 | 446 | 264 | 15 | 37 | 459 | 166 | 565 | 1.09e-14 | 77.0 |
| Msa0641960 | AT1G16400.1 | 25.207 | 242 | 166 | 6 | 208 | 436 | 258 | 497 | 1.37e-14 | 76.3 |
| Msa0641960 | AT5G35715.1 | 24.595 | 370 | 244 | 11 | 76 | 433 | 55 | 401 | 1.49e-14 | 75.9 |
| Msa0641960 | AT5G42590.1 | 28.514 | 249 | 169 | 5 | 208 | 448 | 232 | 479 | 1.76e-14 | 75.9 |
| Msa0641960 | AT1G33720.1 | 26.295 | 251 | 165 | 9 | 203 | 440 | 234 | 477 | 2.04e-14 | 75.9 |
| Msa0641960 | AT1G33720.4 | 26.295 | 251 | 165 | 9 | 203 | 440 | 102 | 345 | 2.08e-14 | 75.1 |
| Msa0641960 | AT1G33720.3 | 26.295 | 251 | 165 | 9 | 203 | 440 | 102 | 345 | 2.08e-14 | 75.1 |
| Msa0641960 | AT1G33720.5 | 26.295 | 251 | 165 | 9 | 203 | 440 | 102 | 345 | 2.08e-14 | 75.1 |
| Msa0641960 | AT3G20100.1 | 23.849 | 239 | 168 | 5 | 221 | 448 | 256 | 491 | 2.38e-14 | 75.5 |
| Msa0641960 | AT3G26210.1 | 21.543 | 376 | 247 | 11 | 76 | 433 | 120 | 465 | 2.97e-14 | 75.1 |
| Msa0641960 | AT3G48320.1 | 28.108 | 185 | 132 | 1 | 260 | 444 | 282 | 465 | 3.87e-14 | 74.7 |
| Msa0641960 | AT1G64930.1 | 27.419 | 186 | 130 | 3 | 255 | 437 | 297 | 480 | 4.50e-14 | 74.7 |
| Msa0641960 | AT3G53280.1 | 23.272 | 434 | 278 | 12 | 22 | 433 | 61 | 461 | 7.77e-14 | 73.9 |
| Msa0641960 | AT4G13770.1 | 26.087 | 230 | 153 | 7 | 220 | 440 | 248 | 469 | 7.78e-14 | 73.9 |
| Msa0641960 | AT2G45570.1 | 28.959 | 221 | 146 | 5 | 214 | 433 | 263 | 473 | 8.62e-14 | 73.9 |
| Msa0641960 | AT3G48290.1 | 26.106 | 226 | 158 | 3 | 215 | 433 | 232 | 455 | 8.74e-14 | 73.9 |
| Msa0641960 | AT4G15380.1 | 27.184 | 206 | 136 | 5 | 241 | 435 | 272 | 474 | 8.87e-14 | 73.9 |
| Msa0641960 | AT3G20940.1 | 25.764 | 229 | 156 | 5 | 221 | 438 | 257 | 482 | 1.18e-13 | 73.6 |
| Msa0641960 | AT2G12190.1 | 27.957 | 186 | 129 | 3 | 255 | 437 | 298 | 481 | 1.56e-13 | 73.2 |
| Msa0641960 | AT2G45560.1 | 29.891 | 184 | 120 | 4 | 252 | 433 | 296 | 472 | 2.21e-13 | 72.8 |
| Msa0641960 | AT1G13110.1 | 24.737 | 380 | 247 | 13 | 76 | 440 | 121 | 476 | 2.45e-13 | 72.4 |
| Msa0641960 | AT2G23220.1 | 27.347 | 245 | 156 | 6 | 201 | 438 | 247 | 476 | 3.61e-13 | 72.0 |
| Msa0641960 | AT3G14630.1 | 22.277 | 404 | 273 | 11 | 38 | 432 | 106 | 477 | 4.29e-13 | 71.6 |
| Msa0641960 | AT5G04330.1 | 23.016 | 252 | 171 | 5 | 197 | 432 | 224 | 468 | 4.48e-13 | 71.6 |
| Msa0641960 | AT5G47990.1 | 25.523 | 239 | 160 | 6 | 214 | 438 | 247 | 481 | 4.98e-13 | 71.6 |
| Msa0641960 | AT3G03470.1 | 27.604 | 192 | 124 | 4 | 257 | 437 | 293 | 480 | 5.58e-13 | 71.2 |
| Msa0641960 | AT5G36110.1 | 26.275 | 255 | 177 | 8 | 215 | 465 | 230 | 477 | 6.38e-13 | 70.9 |
| Msa0641960 | AT3G14630.2 | 22.277 | 404 | 273 | 11 | 38 | 432 | 161 | 532 | 6.94e-13 | 71.2 |
| Msa0641960 | AT4G36220.1 | 29.143 | 175 | 118 | 5 | 260 | 432 | 309 | 479 | 7.61e-13 | 70.9 |
| Msa0641960 | AT3G26190.1 | 23.889 | 360 | 237 | 11 | 76 | 421 | 117 | 453 | 7.62e-13 | 70.9 |
| Msa0641960 | AT5G25900.1 | 25.292 | 257 | 181 | 5 | 197 | 451 | 247 | 494 | 9.88e-13 | 70.5 |
| Msa0641960 | AT3G48290.2 | 34.167 | 120 | 79 | 0 | 314 | 433 | 362 | 481 | 1.30e-12 | 70.1 |
| Msa0641960 | AT3G44250.1 | 23.095 | 433 | 283 | 11 | 21 | 433 | 60 | 462 | 1.53e-12 | 70.1 |
| Msa0641960 | AT1G01190.2 | 27.074 | 229 | 152 | 8 | 212 | 433 | 283 | 503 | 1.88e-12 | 69.7 |
| Msa0641960 | AT3G14690.1 | 21.934 | 424 | 267 | 14 | 34 | 436 | 105 | 485 | 1.96e-12 | 69.7 |
| Msa0641960 | AT1G01190.1 | 27.074 | 229 | 152 | 8 | 212 | 433 | 278 | 498 | 2.00e-12 | 69.7 |
| Msa0641960 | AT1G13100.1 | 23.056 | 373 | 248 | 11 | 76 | 433 | 114 | 462 | 2.10e-12 | 69.3 |
| Msa0641960 | AT3G14690.2 | 21.934 | 424 | 267 | 14 | 34 | 436 | 140 | 520 | 2.13e-12 | 69.7 |
| Msa0641960 | AT4G19230.2 | 27.511 | 229 | 142 | 7 | 212 | 432 | 220 | 432 | 2.21e-12 | 69.3 |
| Msa0641960 | AT1G50560.1 | 22.593 | 270 | 191 | 8 | 182 | 438 | 221 | 485 | 2.27e-12 | 69.3 |
| Msa0641960 | AT2G42850.1 | 26.772 | 254 | 171 | 8 | 214 | 461 | 236 | 480 | 2.33e-12 | 69.3 |
| Msa0641960 | AT3G20110.1 | 25.481 | 208 | 148 | 5 | 259 | 465 | 297 | 498 | 2.62e-12 | 69.3 |
| Msa0641960 | AT1G33720.2 | 28.261 | 184 | 124 | 4 | 259 | 440 | 193 | 370 | 2.83e-12 | 68.6 |
| Msa0641960 | AT3G26200.1 | 22.300 | 426 | 296 | 10 | 21 | 433 | 60 | 463 | 2.91e-12 | 68.9 |
| Msa0641960 | AT4G37410.1 | 23.985 | 271 | 186 | 9 | 203 | 465 | 230 | 488 | 2.96e-12 | 68.9 |
| Msa0641960 | AT3G26270.1 | 24.066 | 241 | 171 | 4 | 205 | 436 | 233 | 470 | 3.86e-12 | 68.6 |
| Msa0641960 | AT2G42250.1 | 29.245 | 212 | 133 | 6 | 240 | 437 | 274 | 482 | 4.11e-12 | 68.6 |
| Msa0641960 | AT2G46960.2 | 22.851 | 442 | 288 | 15 | 37 | 461 | 109 | 514 | 6.33e-12 | 68.2 |
| Msa0641960 | AT3G26330.1 | 20.627 | 383 | 256 | 8 | 95 | 452 | 126 | 485 | 7.22e-12 | 67.8 |
| Msa0641960 | AT1G74550.1 | 26.961 | 204 | 143 | 4 | 257 | 457 | 273 | 473 | 7.88e-12 | 67.8 |
| Msa0641960 | AT5G05260.2 | 25.000 | 240 | 168 | 7 | 203 | 432 | 251 | 488 | 8.04e-12 | 67.8 |
| Msa0641960 | AT5G45340.2 | 28.947 | 228 | 143 | 7 | 210 | 432 | 219 | 432 | 9.12e-12 | 67.4 |
| Msa0641960 | AT3G26290.2 | 25.871 | 402 | 250 | 15 | 79 | 460 | 136 | 509 | 9.32e-12 | 67.4 |
| Msa0641960 | AT1G74540.1 | 26.609 | 233 | 165 | 4 | 227 | 457 | 251 | 479 | 9.95e-12 | 67.4 |
| Msa0641960 | AT2G46960.1 | 25.185 | 270 | 173 | 8 | 198 | 459 | 148 | 396 | 1.01e-11 | 67.0 |
| Msa0641960 | AT3G26290.1 | 25.871 | 402 | 250 | 15 | 79 | 460 | 123 | 496 | 1.06e-11 | 67.4 |
| Msa0641960 | AT5G24960.1 | 26.407 | 231 | 151 | 3 | 210 | 436 | 250 | 465 | 1.19e-11 | 67.0 |
| Msa0641960 | AT4G22690.1 | 21.789 | 436 | 288 | 13 | 18 | 433 | 114 | 516 | 1.53e-11 | 67.0 |
| Msa0641960 | AT1G13090.2 | 21.409 | 369 | 256 | 9 | 76 | 433 | 117 | 462 | 1.84e-11 | 66.6 |
| Msa0641960 | AT4G37430.1 | 24.615 | 260 | 179 | 6 | 179 | 433 | 213 | 460 | 1.89e-11 | 66.6 |
| Msa0641960 | AT1G13080.2 | 27.586 | 174 | 125 | 1 | 260 | 433 | 176 | 348 | 2.23e-11 | 65.9 |
| Msa0641960 | AT1G13080.1 | 25.000 | 200 | 141 | 2 | 242 | 433 | 268 | 466 | 2.85e-11 | 65.9 |
| Msa0641960 | AT3G61880.1 | 24.586 | 423 | 265 | 19 | 31 | 433 | 108 | 496 | 3.06e-11 | 65.9 |
| Msa0641960 | AT3G61880.2 | 24.586 | 423 | 265 | 19 | 31 | 433 | 108 | 496 | 4.01e-11 | 65.5 |
| Msa0641960 | AT3G53300.1 | 27.556 | 225 | 139 | 6 | 222 | 433 | 250 | 463 | 4.06e-11 | 65.5 |
| Msa0641960 | AT4G22710.1 | 21.789 | 436 | 288 | 13 | 18 | 433 | 83 | 485 | 4.58e-11 | 65.5 |
| Msa0641960 | AT4G12320.1 | 22.581 | 248 | 179 | 6 | 200 | 436 | 236 | 481 | 5.34e-11 | 65.1 |
| Msa0641960 | AT3G19270.2 | 26.718 | 262 | 149 | 8 | 216 | 454 | 223 | 464 | 9.81e-11 | 64.3 |
Find 87 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAAATGCATTATCTTAA+TGG | 0.186374 | 4_3:+43186849 | Msa0641960:CDS |
| CACAAGGTTTATGAATTTAT+TGG | 0.190396 | 4_3:-43185911 | None:intergenic |
| GGATACTTAAAAGGACATTT+TGG | 0.225017 | 4_3:-43187083 | None:intergenic |
| GTAGAAAACTGTTTACCTTT+AGG | 0.234206 | 4_3:-43186060 | None:intergenic |
| TAGAAAACTGTTTACCTTTA+GGG | 0.235315 | 4_3:-43186059 | None:intergenic |
| ACAATCCTTGGTGATCTTCT+TGG | 0.252655 | 4_3:+43186081 | Msa0641960:CDS |
| TAACGGCGTCACCGTTAATA+TGG | 0.274716 | 4_3:+43186475 | Msa0641960:CDS |
| AGCGGGGTCGAGGGTTTGTT+TGG | 0.284201 | 4_3:+43187115 | Msa0641960:CDS |
| ACAATCCATGTTCATGTCTT+AGG | 0.295926 | 4_3:+43185973 | Msa0641960:CDS |
| CATTTGGGGACCCGATTGTT+TGG | 0.298506 | 4_3:+43187019 | Msa0641960:CDS |
| AGTAAAACGGTTTGATGTTC+GGG | 0.302804 | 4_3:+43187184 | Msa0641960:CDS |
| CAAAGACGAGAAATTGAAAA+TGG | 0.306869 | 4_3:+43186588 | Msa0641960:CDS |
| CTCGTTTAGAGGTGGTTTGC+CGG | 0.310479 | 4_3:+43187253 | Msa0641960:CDS |
| TTCAGCTCAACGAGCATTAA+CGG | 0.327080 | 4_3:+43186458 | Msa0641960:CDS |
| CGTTTCATCTTCCATATTAA+CGG | 0.330602 | 4_3:-43186486 | None:intergenic |
| TTCTGAGGTATTGTCTGCTT+TGG | 0.332887 | 4_3:-43186289 | None:intergenic |
| GGGTCGGATGGAGAACATTT+GGG | 0.338668 | 4_3:+43187004 | Msa0641960:CDS |
| AACATTTGTAAATTCTCGTT+TGG | 0.348101 | 4_3:+43186360 | Msa0641960:CDS |
| CGGTTTGATGTTCGGGTTGT+TGG | 0.351401 | 4_3:+43187191 | Msa0641960:CDS |
| TGGGTCGGATGGAGAACATT+TGG | 0.366720 | 4_3:+43187003 | Msa0641960:CDS |
| GGTTTAACTGCCTCGTTTAG+AGG | 0.374139 | 4_3:+43187242 | Msa0641960:CDS |
| ATGAAACGTTTCTTCAACAT+TGG | 0.376330 | 4_3:+43186501 | Msa0641960:CDS |
| ACCGTTGCTTCCGCGTTAAC+CGG | 0.376488 | 4_3:+43186720 | Msa0641960:CDS |
| TAGTAAAACGGTTTGATGTT+CGG | 0.378116 | 4_3:+43187183 | Msa0641960:CDS |
| CGGTTTAAATTCCAAACAAT+CGG | 0.382230 | 4_3:-43187030 | None:intergenic |
| GTTCTTTCATAAATCTTAAC+CGG | 0.383823 | 4_3:-43187272 | None:intergenic |
| AATTAAAATAGTAAACGATT+TGG | 0.386462 | 4_3:+43186548 | Msa0641960:CDS |
| TCTAAACGAGGCAGTTAAAC+CGG | 0.397860 | 4_3:-43187240 | None:intergenic |
| GCAAACTGCGGCTCTTGGTT+CGG | 0.401671 | 4_3:-43187215 | None:intergenic |
| CACTTATCACCCGTATGCTA+TGG | 0.403576 | 4_3:+43186983 | Msa0641960:CDS |
| GCGGGGTCGAGGGTTTGTTT+GGG | 0.410361 | 4_3:+43187116 | Msa0641960:CDS |
| CTTGAGCCGGGTTCATTACT+CGG | 0.418598 | 4_3:-43186803 | None:intergenic |
| AACTTTGAATCAAATTGAAC+CGG | 0.419157 | 4_3:-43186903 | None:intergenic |
| CGATTGTTTGGAATTTAAAC+CGG | 0.422822 | 4_3:+43187031 | Msa0641960:CDS |
| TGAAACGTTTCTTCAACATT+GGG | 0.445209 | 4_3:+43186502 | Msa0641960:CDS |
| AAAGTAGCGCACTCTTGAGC+CGG | 0.450891 | 4_3:-43186816 | None:intergenic |
| GCATTTGCAAGATTTGAAAC+AGG | 0.463179 | 4_3:-43186414 | None:intergenic |
| CGGGTGCAAACTGCGGCTCT+TGG | 0.471945 | 4_3:-43187220 | None:intergenic |
| TCGTTGCTTCATTAGTAAAA+CGG | 0.474372 | 4_3:+43187171 | Msa0641960:CDS |
| TCAACGTTGACGGTCATTCG+TGG | 0.480435 | 4_3:+43186115 | Msa0641960:CDS |
| ACCGGTTAACGCGGAAGCAA+CGG | 0.488090 | 4_3:-43186721 | None:intergenic |
| AAACTTTCTTAACTATGAGT+TGG | 0.488575 | 4_3:+43185887 | None:intergenic |
| GTCGAGGGTTTGTTTGGGAA+AGG | 0.490821 | 4_3:+43187121 | Msa0641960:CDS |
| CTTCTTAAAGAATCACCAAC+AGG | 0.496377 | 4_3:+43185949 | Msa0641960:CDS |
| TGATTCAAAGTTCGCTCTTG+AGG | 0.496939 | 4_3:+43186914 | Msa0641960:CDS |
| CAAGAGCCGCAGTTTGCACC+CGG | 0.497130 | 4_3:+43187221 | Msa0641960:CDS |
| CTTGGTGATCTTCTTGGCCG+TGG | 0.498898 | 4_3:+43186087 | Msa0641960:CDS |
| TAAACCGGAGAGATGGTTGA+AGG | 0.507528 | 4_3:+43187046 | Msa0641960:CDS |
| CAATAAATTCATAAACCTTG+TGG | 0.510208 | 4_3:+43185912 | Msa0641960:CDS |
| GGTTTAAATTCCAAACAATC+GGG | 0.512909 | 4_3:-43187029 | None:intergenic |
| TCCATCCGACCCATAGCATA+CGG | 0.514140 | 4_3:-43186993 | None:intergenic |
| GAGCGATTCATGAGAGTATG+AGG | 0.518184 | 4_3:+43186871 | Msa0641960:CDS |
| CCATCCTTCAACCATCTCTC+CGG | 0.528233 | 4_3:-43187050 | None:intergenic |
| CCCGTATGCTATGGGTCGGA+TGG | 0.528361 | 4_3:+43186992 | Msa0641960:CDS |
| CGTGGTATCTTCAACGTTGA+CGG | 0.529228 | 4_3:+43186105 | Msa0641960:CDS |
| ACTTATCACCCGTATGCTAT+GGG | 0.533505 | 4_3:+43186984 | Msa0641960:CDS |
| AATTTCAACAACTACCCTAA+AGG | 0.540258 | 4_3:+43186045 | Msa0641960:CDS |
| AGTGATTCGTTCCTACGCTA+TGG | 0.548477 | 4_3:+43186179 | Msa0641960:CDS |
| AGATTTGAAACAGGAAGTGA+TGG | 0.556552 | 4_3:-43186405 | None:intergenic |
| TGGAATTTAAACCGGAGAGA+TGG | 0.561605 | 4_3:+43187039 | Msa0641960:CDS |
| AAGTAGCGCACTCTTGAGCC+GGG | 0.563898 | 4_3:-43186815 | None:intergenic |
| TCGGCAACAGAAGCTATAAG+AGG | 0.572241 | 4_3:-43186237 | None:intergenic |
| CTAAACGAGGCAGTTAAACC+GGG | 0.580288 | 4_3:-43187239 | None:intergenic |
| ATTGTGGAAGAACCCGAAAG+TGG | 0.580952 | 4_3:+43186755 | Msa0641960:CDS |
| TTAACTGCCTCGTTTAGAGG+TGG | 0.582614 | 4_3:+43187245 | Msa0641960:CDS |
| TTTGAATCAAATTGAACCGG+TGG | 0.584985 | 4_3:-43186900 | None:intergenic |
| GAGGATGACGTGTTACCAGA+TGG | 0.591293 | 4_3:+43186933 | Msa0641960:CDS |
| CCATCCGACCCATAGCATAC+GGG | 0.592232 | 4_3:-43186992 | None:intergenic |
| GGTCGGATGGAGAACATTTG+GGG | 0.602556 | 4_3:+43187005 | Msa0641960:CDS |
| CCGGAGAGATGGTTGAAGGA+TGG | 0.605968 | 4_3:+43187050 | Msa0641960:CDS |
| ATCACCCGTATGCTATGGGT+CGG | 0.609704 | 4_3:+43186988 | Msa0641960:CDS |
| GTCGAAAAGAACGTCTTCTG+AGG | 0.632820 | 4_3:-43186304 | None:intergenic |
| AGTGATGGAACAAGACAACA+TGG | 0.634539 | 4_3:-43186390 | None:intergenic |
| GTTAAACCGGGTGCAAACTG+CGG | 0.639076 | 4_3:-43187227 | None:intergenic |
| AACCTCAAATCCAGAAAACG+TGG | 0.643222 | 4_3:+43186005 | Msa0641960:CDS |
| TGAACATGGATTGTTCCTGT+TGG | 0.644979 | 4_3:-43185964 | None:intergenic |
| GTGGAAGAACCCGAAAGTGG+AGG | 0.646099 | 4_3:+43186758 | Msa0641960:CDS |
| AAAATGGCATCTCTTGAACT+CGG | 0.657903 | 4_3:+43186150 | Msa0641960:CDS |
| CGGCAAACCACCTCTAAACG+AGG | 0.661985 | 4_3:-43187252 | None:intergenic |
| TGTTACCTAAGACATGAACA+TGG | 0.670896 | 4_3:-43185978 | None:intergenic |
| GATGACAAGTTCCATAGCGT+AGG | 0.676576 | 4_3:-43186190 | None:intergenic |
| TCATCGAAGAAATCAAAACA+AGG | 0.681346 | 4_3:+43186208 | Msa0641960:CDS |
| GTTAGACCGAGTAATGAACC+CGG | 0.697136 | 4_3:+43186797 | Msa0641960:CDS |
| CGTCAACGTTGAAGATACCA+CGG | 0.716028 | 4_3:-43186104 | None:intergenic |
| GATGTGTGTAGTAATCCACA+AGG | 0.726385 | 4_3:-43185927 | None:intergenic |
| CACGGCCAAGAAGATCACCA+AGG | 0.761755 | 4_3:-43186086 | None:intergenic |
| GTGATGGAACAAGACAACAT+GGG | 0.769475 | 4_3:-43186389 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATAGTAAACGATT+TGG | + | chr4_3:43186548-43186567 | Msa0641960:CDS | 15.0% |
| !! | AATTAAAATAGTAAACGATT+TGG | + | chr4_3:43186548-43186567 | Msa0641960:CDS | 15.0% |
| !! | CCACAATAAAATAAAAAAAC+CGG | - | chr4_3:43186742-43186761 | None:intergenic | 20.0% |
| !!! | TTTTTTATAAAAGTTCCATC+TGG | - | chr4_3:43186951-43186970 | None:intergenic | 20.0% |
| !!! | AGATGGAACTTTTATAAAAA+AGG | + | chr4_3:43186950-43186969 | Msa0641960:CDS | 20.0% |
| !!! | GATGGAACTTTTATAAAAAA+GGG | + | chr4_3:43186951-43186970 | Msa0641960:CDS | 20.0% |
| !!! | ATGGAACTTTTATAAAAAAG+GGG | + | chr4_3:43186952-43186971 | Msa0641960:CDS | 20.0% |
| !! | CCACAATAAAATAAAAAAAC+CGG | - | chr4_3:43186742-43186761 | None:intergenic | 20.0% |
| !!! | TTTTTTATAAAAGTTCCATC+TGG | - | chr4_3:43186951-43186970 | None:intergenic | 20.0% |
| !!! | AGATGGAACTTTTATAAAAA+AGG | + | chr4_3:43186950-43186969 | Msa0641960:CDS | 20.0% |
| !!! | GATGGAACTTTTATAAAAAA+GGG | + | chr4_3:43186951-43186970 | Msa0641960:CDS | 20.0% |
| !!! | ATGGAACTTTTATAAAAAAG+GGG | + | chr4_3:43186952-43186971 | Msa0641960:CDS | 20.0% |
| ! | CACAAGGTTTATGAATTTAT+TGG | - | chr4_3:43185914-43185933 | None:intergenic | 25.0% |
| ! | CAATAAATTCATAAACCTTG+TGG | + | chr4_3:43185912-43185931 | Msa0641960:CDS | 25.0% |
| ! | TAGAAAACTGTTTACCTTTA+GGG | - | chr4_3:43186062-43186081 | None:intergenic | 25.0% |
| ! | AACATTTGTAAATTCTCGTT+TGG | + | chr4_3:43186360-43186379 | Msa0641960:CDS | 25.0% |
| !!! | CCGGTTTTTTTATTTTATTG+TGG | + | chr4_3:43186739-43186758 | Msa0641960:CDS | 25.0% |
| ! | AACTTTGAATCAAATTGAAC+CGG | - | chr4_3:43186906-43186925 | None:intergenic | 25.0% |
| !!! | AAAATGTCCTTTTAAGTATC+CGG | + | chr4_3:43187085-43187104 | Msa0641960:CDS | 25.0% |
| ! | GTTCTTTCATAAATCTTAAC+CGG | - | chr4_3:43187275-43187294 | None:intergenic | 25.0% |
| ! | CACAAGGTTTATGAATTTAT+TGG | - | chr4_3:43185914-43185933 | None:intergenic | 25.0% |
| ! | CAATAAATTCATAAACCTTG+TGG | + | chr4_3:43185912-43185931 | Msa0641960:CDS | 25.0% |
| ! | TAGAAAACTGTTTACCTTTA+GGG | - | chr4_3:43186062-43186081 | None:intergenic | 25.0% |
| ! | AACATTTGTAAATTCTCGTT+TGG | + | chr4_3:43186360-43186379 | Msa0641960:CDS | 25.0% |
| !!! | CCGGTTTTTTTATTTTATTG+TGG | + | chr4_3:43186739-43186758 | Msa0641960:CDS | 25.0% |
| ! | AACTTTGAATCAAATTGAAC+CGG | - | chr4_3:43186906-43186925 | None:intergenic | 25.0% |
| !!! | AAAATGTCCTTTTAAGTATC+CGG | + | chr4_3:43187085-43187104 | Msa0641960:CDS | 25.0% |
| ! | GTTCTTTCATAAATCTTAAC+CGG | - | chr4_3:43187275-43187294 | None:intergenic | 25.0% |
| AATTTCAACAACTACCCTAA+AGG | + | chr4_3:43186045-43186064 | Msa0641960:CDS | 30.0% | |
| GTAGAAAACTGTTTACCTTT+AGG | - | chr4_3:43186063-43186082 | None:intergenic | 30.0% | |
| ! | AAACAGTTTTCTACAATCCT+TGG | + | chr4_3:43186069-43186088 | Msa0641960:CDS | 30.0% |
| TCATCGAAGAAATCAAAACA+AGG | + | chr4_3:43186208-43186227 | Msa0641960:CDS | 30.0% | |
| CGTTTCATCTTCCATATTAA+CGG | - | chr4_3:43186489-43186508 | None:intergenic | 30.0% | |
| ATGAAACGTTTCTTCAACAT+TGG | + | chr4_3:43186501-43186520 | Msa0641960:CDS | 30.0% | |
| TGAAACGTTTCTTCAACATT+GGG | + | chr4_3:43186502-43186521 | Msa0641960:CDS | 30.0% | |
| CAAAGACGAGAAATTGAAAA+TGG | + | chr4_3:43186588-43186607 | Msa0641960:CDS | 30.0% | |
| ! | AGATCTTCTATCTCGTTTTA+TGG | + | chr4_3:43186626-43186645 | Msa0641960:CDS | 30.0% |
| ! | GATCTTCTATCTCGTTTTAT+GGG | + | chr4_3:43186627-43186646 | Msa0641960:CDS | 30.0% |
| !!! | TGTTGTTAGTTTTCTGTTAG+CGG | + | chr4_3:43186689-43186708 | Msa0641960:CDS | 30.0% |
| AATAAAAAAACCGGTTAACG+CGG | - | chr4_3:43186733-43186752 | None:intergenic | 30.0% | |
| CGTGAAATGCATTATCTTAA+TGG | + | chr4_3:43186849-43186868 | Msa0641960:CDS | 30.0% | |
| ! | CTTTTATAAAAAAGGGGAGT+CGG | + | chr4_3:43186958-43186977 | Msa0641960:CDS | 30.0% |
| ! | TTTTATAAAAAAGGGGAGTC+GGG | + | chr4_3:43186959-43186978 | Msa0641960:CDS | 30.0% |
| GGTTTAAATTCCAAACAATC+GGG | - | chr4_3:43187032-43187051 | None:intergenic | 30.0% | |
| CGGTTTAAATTCCAAACAAT+CGG | - | chr4_3:43187033-43187052 | None:intergenic | 30.0% | |
| ! | CGATTGTTTGGAATTTAAAC+CGG | + | chr4_3:43187031-43187050 | Msa0641960:CDS | 30.0% |
| ! | GGATACTTAAAAGGACATTT+TGG | - | chr4_3:43187086-43187105 | None:intergenic | 30.0% |
| TGAAAAACCGGATACTTAAA+AGG | - | chr4_3:43187095-43187114 | None:intergenic | 30.0% | |
| TCGTTGCTTCATTAGTAAAA+CGG | + | chr4_3:43187171-43187190 | Msa0641960:CDS | 30.0% | |
| TAGTAAAACGGTTTGATGTT+CGG | + | chr4_3:43187183-43187202 | Msa0641960:CDS | 30.0% | |
| AATTTCAACAACTACCCTAA+AGG | + | chr4_3:43186045-43186064 | Msa0641960:CDS | 30.0% | |
| GTAGAAAACTGTTTACCTTT+AGG | - | chr4_3:43186063-43186082 | None:intergenic | 30.0% | |
| ! | AAACAGTTTTCTACAATCCT+TGG | + | chr4_3:43186069-43186088 | Msa0641960:CDS | 30.0% |
| TCATCGAAGAAATCAAAACA+AGG | + | chr4_3:43186208-43186227 | Msa0641960:CDS | 30.0% | |
| CGTTTCATCTTCCATATTAA+CGG | - | chr4_3:43186489-43186508 | None:intergenic | 30.0% | |
| ATGAAACGTTTCTTCAACAT+TGG | + | chr4_3:43186501-43186520 | Msa0641960:CDS | 30.0% | |
| TGAAACGTTTCTTCAACATT+GGG | + | chr4_3:43186502-43186521 | Msa0641960:CDS | 30.0% | |
| CAAAGACGAGAAATTGAAAA+TGG | + | chr4_3:43186588-43186607 | Msa0641960:CDS | 30.0% | |
| ! | AGATCTTCTATCTCGTTTTA+TGG | + | chr4_3:43186626-43186645 | Msa0641960:CDS | 30.0% |
| ! | GATCTTCTATCTCGTTTTAT+GGG | + | chr4_3:43186627-43186646 | Msa0641960:CDS | 30.0% |
| !!! | TGTTGTTAGTTTTCTGTTAG+CGG | + | chr4_3:43186689-43186708 | Msa0641960:CDS | 30.0% |
| AATAAAAAAACCGGTTAACG+CGG | - | chr4_3:43186733-43186752 | None:intergenic | 30.0% | |
| CGTGAAATGCATTATCTTAA+TGG | + | chr4_3:43186849-43186868 | Msa0641960:CDS | 30.0% | |
| ! | CTTTTATAAAAAAGGGGAGT+CGG | + | chr4_3:43186958-43186977 | Msa0641960:CDS | 30.0% |
| ! | TTTTATAAAAAAGGGGAGTC+GGG | + | chr4_3:43186959-43186978 | Msa0641960:CDS | 30.0% |
| GGTTTAAATTCCAAACAATC+GGG | - | chr4_3:43187032-43187051 | None:intergenic | 30.0% | |
| CGGTTTAAATTCCAAACAAT+CGG | - | chr4_3:43187033-43187052 | None:intergenic | 30.0% | |
| ! | CGATTGTTTGGAATTTAAAC+CGG | + | chr4_3:43187031-43187050 | Msa0641960:CDS | 30.0% |
| ! | GGATACTTAAAAGGACATTT+TGG | - | chr4_3:43187086-43187105 | None:intergenic | 30.0% |
| TGAAAAACCGGATACTTAAA+AGG | - | chr4_3:43187095-43187114 | None:intergenic | 30.0% | |
| TCGTTGCTTCATTAGTAAAA+CGG | + | chr4_3:43187171-43187190 | Msa0641960:CDS | 30.0% | |
| TAGTAAAACGGTTTGATGTT+CGG | + | chr4_3:43187183-43187202 | Msa0641960:CDS | 30.0% | |
| CTTCTTAAAGAATCACCAAC+AGG | + | chr4_3:43185949-43185968 | Msa0641960:CDS | 35.0% | |
| ACAATCCATGTTCATGTCTT+AGG | + | chr4_3:43185973-43185992 | Msa0641960:CDS | 35.0% | |
| TGTTACCTAAGACATGAACA+TGG | - | chr4_3:43185981-43186000 | None:intergenic | 35.0% | |
| ! | AGTATATACTCCACGTTTTC+TGG | - | chr4_3:43186018-43186037 | None:intergenic | 35.0% |
| GTGGAAGTTTCAACGAAAAA+TGG | + | chr4_3:43186134-43186153 | Msa0641960:CDS | 35.0% | |
| AAAATGGCATCTCTTGAACT+CGG | + | chr4_3:43186150-43186169 | Msa0641960:CDS | 35.0% | |
| ! | AGATTTGAAACAGGAAGTGA+TGG | - | chr4_3:43186408-43186427 | None:intergenic | 35.0% |
| ! | GCATTTGCAAGATTTGAAAC+AGG | - | chr4_3:43186417-43186436 | None:intergenic | 35.0% |
| !!! | GTTGTTAGTTTTCTGTTAGC+GGG | + | chr4_3:43186690-43186709 | Msa0641960:CDS | 35.0% |
| !!! | GAATTTTTTCCTCCACTTTC+GGG | - | chr4_3:43186770-43186789 | None:intergenic | 35.0% |
| !!! | CGAATTTTTTCCTCCACTTT+CGG | - | chr4_3:43186771-43186790 | None:intergenic | 35.0% |
| CGAAAGTGGAGGAAAAAATT+CGG | + | chr4_3:43186769-43186788 | Msa0641960:CDS | 35.0% | |
| GAAAGTGGAGGAAAAAATTC+GGG | + | chr4_3:43186770-43186789 | Msa0641960:CDS | 35.0% | |
| TTTGAATCAAATTGAACCGG+TGG | - | chr4_3:43186903-43186922 | None:intergenic | 35.0% | |
| !!! | TAAGTATCCGGTTTTTCAAG+CGG | + | chr4_3:43187097-43187116 | Msa0641960:CDS | 35.0% |
| AGTAAAACGGTTTGATGTTC+GGG | + | chr4_3:43187184-43187203 | Msa0641960:CDS | 35.0% | |
| CTTCTTAAAGAATCACCAAC+AGG | + | chr4_3:43185949-43185968 | Msa0641960:CDS | 35.0% | |
| ACAATCCATGTTCATGTCTT+AGG | + | chr4_3:43185973-43185992 | Msa0641960:CDS | 35.0% | |
| TGTTACCTAAGACATGAACA+TGG | - | chr4_3:43185981-43186000 | None:intergenic | 35.0% | |
| ! | AGTATATACTCCACGTTTTC+TGG | - | chr4_3:43186018-43186037 | None:intergenic | 35.0% |
| GTGGAAGTTTCAACGAAAAA+TGG | + | chr4_3:43186134-43186153 | Msa0641960:CDS | 35.0% | |
| AAAATGGCATCTCTTGAACT+CGG | + | chr4_3:43186150-43186169 | Msa0641960:CDS | 35.0% | |
| ! | AGATTTGAAACAGGAAGTGA+TGG | - | chr4_3:43186408-43186427 | None:intergenic | 35.0% |
| ! | GCATTTGCAAGATTTGAAAC+AGG | - | chr4_3:43186417-43186436 | None:intergenic | 35.0% |
| !!! | GTTGTTAGTTTTCTGTTAGC+GGG | + | chr4_3:43186690-43186709 | Msa0641960:CDS | 35.0% |
| !!! | GAATTTTTTCCTCCACTTTC+GGG | - | chr4_3:43186770-43186789 | None:intergenic | 35.0% |
| !!! | CGAATTTTTTCCTCCACTTT+CGG | - | chr4_3:43186771-43186790 | None:intergenic | 35.0% |
| CGAAAGTGGAGGAAAAAATT+CGG | + | chr4_3:43186769-43186788 | Msa0641960:CDS | 35.0% | |
| GAAAGTGGAGGAAAAAATTC+GGG | + | chr4_3:43186770-43186789 | Msa0641960:CDS | 35.0% | |
| TTTGAATCAAATTGAACCGG+TGG | - | chr4_3:43186903-43186922 | None:intergenic | 35.0% | |
| !!! | TAAGTATCCGGTTTTTCAAG+CGG | + | chr4_3:43187097-43187116 | Msa0641960:CDS | 35.0% |
| AGTAAAACGGTTTGATGTTC+GGG | + | chr4_3:43187184-43187203 | Msa0641960:CDS | 35.0% | |
| GATGTGTGTAGTAATCCACA+AGG | - | chr4_3:43185930-43185949 | None:intergenic | 40.0% | |
| ! | TGAACATGGATTGTTCCTGT+TGG | - | chr4_3:43185967-43185986 | None:intergenic | 40.0% |
| AACCTCAAATCCAGAAAACG+TGG | + | chr4_3:43186005-43186024 | Msa0641960:CDS | 40.0% | |
| ! | ACAATCCTTGGTGATCTTCT+TGG | + | chr4_3:43186081-43186100 | Msa0641960:CDS | 40.0% |
| !! | TTCTGAGGTATTGTCTGCTT+TGG | - | chr4_3:43186292-43186311 | None:intergenic | 40.0% |
| ! | GTGATGGAACAAGACAACAT+GGG | - | chr4_3:43186392-43186411 | None:intergenic | 40.0% |
| ! | AGTGATGGAACAAGACAACA+TGG | - | chr4_3:43186393-43186412 | None:intergenic | 40.0% |
| TTCAGCTCAACGAGCATTAA+CGG | + | chr4_3:43186458-43186477 | Msa0641960:CDS | 40.0% | |
| TGATTCAAAGTTCGCTCTTG+AGG | + | chr4_3:43186914-43186933 | Msa0641960:CDS | 40.0% | |
| ACTTATCACCCGTATGCTAT+GGG | + | chr4_3:43186984-43187003 | Msa0641960:CDS | 40.0% | |
| TGGAATTTAAACCGGAGAGA+TGG | + | chr4_3:43187039-43187058 | Msa0641960:CDS | 40.0% | |
| !!! | AAGTATCCGGTTTTTCAAGC+GGG | + | chr4_3:43187098-43187117 | Msa0641960:CDS | 40.0% |
| TCTAAACGAGGCAGTTAAAC+CGG | - | chr4_3:43187243-43187262 | None:intergenic | 40.0% | |
| GATGTGTGTAGTAATCCACA+AGG | - | chr4_3:43185930-43185949 | None:intergenic | 40.0% | |
| ! | TGAACATGGATTGTTCCTGT+TGG | - | chr4_3:43185967-43185986 | None:intergenic | 40.0% |
| AACCTCAAATCCAGAAAACG+TGG | + | chr4_3:43186005-43186024 | Msa0641960:CDS | 40.0% | |
| ! | ACAATCCTTGGTGATCTTCT+TGG | + | chr4_3:43186081-43186100 | Msa0641960:CDS | 40.0% |
| !! | TTCTGAGGTATTGTCTGCTT+TGG | - | chr4_3:43186292-43186311 | None:intergenic | 40.0% |
| ! | GTGATGGAACAAGACAACAT+GGG | - | chr4_3:43186392-43186411 | None:intergenic | 40.0% |
| ! | AGTGATGGAACAAGACAACA+TGG | - | chr4_3:43186393-43186412 | None:intergenic | 40.0% |
| TTCAGCTCAACGAGCATTAA+CGG | + | chr4_3:43186458-43186477 | Msa0641960:CDS | 40.0% | |
| TGATTCAAAGTTCGCTCTTG+AGG | + | chr4_3:43186914-43186933 | Msa0641960:CDS | 40.0% | |
| ACTTATCACCCGTATGCTAT+GGG | + | chr4_3:43186984-43187003 | Msa0641960:CDS | 40.0% | |
| TGGAATTTAAACCGGAGAGA+TGG | + | chr4_3:43187039-43187058 | Msa0641960:CDS | 40.0% | |
| !!! | AAGTATCCGGTTTTTCAAGC+GGG | + | chr4_3:43187098-43187117 | Msa0641960:CDS | 40.0% |
| TCTAAACGAGGCAGTTAAAC+CGG | - | chr4_3:43187243-43187262 | None:intergenic | 40.0% | |
| ! | CTCCACGTTTTCTGGATTTG+AGG | - | chr4_3:43186010-43186029 | None:intergenic | 45.0% |
| CGTCAACGTTGAAGATACCA+CGG | - | chr4_3:43186107-43186126 | None:intergenic | 45.0% | |
| CGTGGTATCTTCAACGTTGA+CGG | + | chr4_3:43186105-43186124 | Msa0641960:CDS | 45.0% | |
| AGTGATTCGTTCCTACGCTA+TGG | + | chr4_3:43186179-43186198 | Msa0641960:CDS | 45.0% | |
| GATGACAAGTTCCATAGCGT+AGG | - | chr4_3:43186193-43186212 | None:intergenic | 45.0% | |
| TCGGCAACAGAAGCTATAAG+AGG | - | chr4_3:43186240-43186259 | None:intergenic | 45.0% | |
| !!! | AGCACTCGCGGTTTTTTTCT+CGG | - | chr4_3:43186259-43186278 | None:intergenic | 45.0% |
| GTCGAAAAGAACGTCTTCTG+AGG | - | chr4_3:43186307-43186326 | None:intergenic | 45.0% | |
| TAACGGCGTCACCGTTAATA+TGG | + | chr4_3:43186475-43186494 | Msa0641960:CDS | 45.0% | |
| ATTGTGGAAGAACCCGAAAG+TGG | + | chr4_3:43186755-43186774 | Msa0641960:CDS | 45.0% | |
| GTTAGACCGAGTAATGAACC+CGG | + | chr4_3:43186797-43186816 | Msa0641960:CDS | 45.0% | |
| ! | GAGCGATTCATGAGAGTATG+AGG | + | chr4_3:43186871-43186890 | Msa0641960:CDS | 45.0% |
| !! | GAGTATGAGGCTTTTTCCAC+CGG | + | chr4_3:43186884-43186903 | Msa0641960:CDS | 45.0% |
| CACTTATCACCCGTATGCTA+TGG | + | chr4_3:43186983-43187002 | Msa0641960:CDS | 45.0% | |
| TAAACCGGAGAGATGGTTGA+AGG | + | chr4_3:43187046-43187065 | Msa0641960:CDS | 45.0% | |
| !!! | AGTATCCGGTTTTTCAAGCG+GGG | + | chr4_3:43187099-43187118 | Msa0641960:CDS | 45.0% |
| CTAAACGAGGCAGTTAAACC+GGG | - | chr4_3:43187242-43187261 | None:intergenic | 45.0% | |
| GGTTTAACTGCCTCGTTTAG+AGG | + | chr4_3:43187242-43187261 | Msa0641960:CDS | 45.0% | |
| TTAACTGCCTCGTTTAGAGG+TGG | + | chr4_3:43187245-43187264 | Msa0641960:CDS | 45.0% | |
| ! | CTCCACGTTTTCTGGATTTG+AGG | - | chr4_3:43186010-43186029 | None:intergenic | 45.0% |
| CGTCAACGTTGAAGATACCA+CGG | - | chr4_3:43186107-43186126 | None:intergenic | 45.0% | |
| CGTGGTATCTTCAACGTTGA+CGG | + | chr4_3:43186105-43186124 | Msa0641960:CDS | 45.0% | |
| AGTGATTCGTTCCTACGCTA+TGG | + | chr4_3:43186179-43186198 | Msa0641960:CDS | 45.0% | |
| GATGACAAGTTCCATAGCGT+AGG | - | chr4_3:43186193-43186212 | None:intergenic | 45.0% | |
| TCGGCAACAGAAGCTATAAG+AGG | - | chr4_3:43186240-43186259 | None:intergenic | 45.0% | |
| !!! | AGCACTCGCGGTTTTTTTCT+CGG | - | chr4_3:43186259-43186278 | None:intergenic | 45.0% |
| GTCGAAAAGAACGTCTTCTG+AGG | - | chr4_3:43186307-43186326 | None:intergenic | 45.0% | |
| TAACGGCGTCACCGTTAATA+TGG | + | chr4_3:43186475-43186494 | Msa0641960:CDS | 45.0% | |
| ATTGTGGAAGAACCCGAAAG+TGG | + | chr4_3:43186755-43186774 | Msa0641960:CDS | 45.0% | |
| GTTAGACCGAGTAATGAACC+CGG | + | chr4_3:43186797-43186816 | Msa0641960:CDS | 45.0% | |
| ! | GAGCGATTCATGAGAGTATG+AGG | + | chr4_3:43186871-43186890 | Msa0641960:CDS | 45.0% |
| !! | GAGTATGAGGCTTTTTCCAC+CGG | + | chr4_3:43186884-43186903 | Msa0641960:CDS | 45.0% |
| CACTTATCACCCGTATGCTA+TGG | + | chr4_3:43186983-43187002 | Msa0641960:CDS | 45.0% | |
| TAAACCGGAGAGATGGTTGA+AGG | + | chr4_3:43187046-43187065 | Msa0641960:CDS | 45.0% | |
| !!! | AGTATCCGGTTTTTCAAGCG+GGG | + | chr4_3:43187099-43187118 | Msa0641960:CDS | 45.0% |
| CTAAACGAGGCAGTTAAACC+GGG | - | chr4_3:43187242-43187261 | None:intergenic | 45.0% | |
| GGTTTAACTGCCTCGTTTAG+AGG | + | chr4_3:43187242-43187261 | Msa0641960:CDS | 45.0% | |
| TTAACTGCCTCGTTTAGAGG+TGG | + | chr4_3:43187245-43187264 | Msa0641960:CDS | 45.0% | |
| TCAACGTTGACGGTCATTCG+TGG | + | chr4_3:43186115-43186134 | Msa0641960:CDS | 50.0% | |
| ! | GGATTTTGTGTGAGCACTCG+CGG | - | chr4_3:43186271-43186290 | None:intergenic | 50.0% |
| CTTGAGCCGGGTTCATTACT+CGG | - | chr4_3:43186806-43186825 | None:intergenic | 50.0% | |
| AAAGTAGCGCACTCTTGAGC+CGG | - | chr4_3:43186819-43186838 | None:intergenic | 50.0% | |
| GAGGATGACGTGTTACCAGA+TGG | + | chr4_3:43186933-43186952 | Msa0641960:CDS | 50.0% | |
| ATCACCCGTATGCTATGGGT+CGG | + | chr4_3:43186988-43187007 | Msa0641960:CDS | 50.0% | |
| TCCATCCGACCCATAGCATA+CGG | - | chr4_3:43186996-43187015 | None:intergenic | 50.0% | |
| TGGGTCGGATGGAGAACATT+TGG | + | chr4_3:43187003-43187022 | Msa0641960:CDS | 50.0% | |
| GGGTCGGATGGAGAACATTT+GGG | + | chr4_3:43187004-43187023 | Msa0641960:CDS | 50.0% | |
| GGTCGGATGGAGAACATTTG+GGG | + | chr4_3:43187005-43187024 | Msa0641960:CDS | 50.0% | |
| CATTTGGGGACCCGATTGTT+TGG | + | chr4_3:43187019-43187038 | Msa0641960:CDS | 50.0% | |
| CCATCCTTCAACCATCTCTC+CGG | - | chr4_3:43187053-43187072 | None:intergenic | 50.0% | |
| ! | GTCGAGGGTTTGTTTGGGAA+AGG | + | chr4_3:43187121-43187140 | Msa0641960:CDS | 50.0% |
| !! | CGGTTTGATGTTCGGGTTGT+TGG | + | chr4_3:43187191-43187210 | Msa0641960:CDS | 50.0% |
| GTTAAACCGGGTGCAAACTG+CGG | - | chr4_3:43187230-43187249 | None:intergenic | 50.0% | |
| ! | CTCGTTTAGAGGTGGTTTGC+CGG | + | chr4_3:43187253-43187272 | Msa0641960:CDS | 50.0% |
| TCAACGTTGACGGTCATTCG+TGG | + | chr4_3:43186115-43186134 | Msa0641960:CDS | 50.0% | |
| ! | GGATTTTGTGTGAGCACTCG+CGG | - | chr4_3:43186271-43186290 | None:intergenic | 50.0% |
| CTTGAGCCGGGTTCATTACT+CGG | - | chr4_3:43186806-43186825 | None:intergenic | 50.0% | |
| AAAGTAGCGCACTCTTGAGC+CGG | - | chr4_3:43186819-43186838 | None:intergenic | 50.0% | |
| GAGGATGACGTGTTACCAGA+TGG | + | chr4_3:43186933-43186952 | Msa0641960:CDS | 50.0% | |
| ATCACCCGTATGCTATGGGT+CGG | + | chr4_3:43186988-43187007 | Msa0641960:CDS | 50.0% | |
| TCCATCCGACCCATAGCATA+CGG | - | chr4_3:43186996-43187015 | None:intergenic | 50.0% | |
| TGGGTCGGATGGAGAACATT+TGG | + | chr4_3:43187003-43187022 | Msa0641960:CDS | 50.0% | |
| GGGTCGGATGGAGAACATTT+GGG | + | chr4_3:43187004-43187023 | Msa0641960:CDS | 50.0% | |
| GGTCGGATGGAGAACATTTG+GGG | + | chr4_3:43187005-43187024 | Msa0641960:CDS | 50.0% | |
| CATTTGGGGACCCGATTGTT+TGG | + | chr4_3:43187019-43187038 | Msa0641960:CDS | 50.0% | |
| CCATCCTTCAACCATCTCTC+CGG | - | chr4_3:43187053-43187072 | None:intergenic | 50.0% | |
| ! | GTCGAGGGTTTGTTTGGGAA+AGG | + | chr4_3:43187121-43187140 | Msa0641960:CDS | 50.0% |
| !! | CGGTTTGATGTTCGGGTTGT+TGG | + | chr4_3:43187191-43187210 | Msa0641960:CDS | 50.0% |
| GTTAAACCGGGTGCAAACTG+CGG | - | chr4_3:43187230-43187249 | None:intergenic | 50.0% | |
| ! | CTCGTTTAGAGGTGGTTTGC+CGG | + | chr4_3:43187253-43187272 | Msa0641960:CDS | 50.0% |
| CACGGCCAAGAAGATCACCA+AGG | - | chr4_3:43186089-43186108 | None:intergenic | 55.0% | |
| ! | CTTGGTGATCTTCTTGGCCG+TGG | + | chr4_3:43186087-43186106 | Msa0641960:CDS | 55.0% |
| ACCGTTGCTTCCGCGTTAAC+CGG | + | chr4_3:43186720-43186739 | Msa0641960:CDS | 55.0% | |
| ACCGGTTAACGCGGAAGCAA+CGG | - | chr4_3:43186724-43186743 | None:intergenic | 55.0% | |
| GTGGAAGAACCCGAAAGTGG+AGG | + | chr4_3:43186758-43186777 | Msa0641960:CDS | 55.0% | |
| AAGTAGCGCACTCTTGAGCC+GGG | - | chr4_3:43186818-43186837 | None:intergenic | 55.0% | |
| CCATCCGACCCATAGCATAC+GGG | - | chr4_3:43186995-43187014 | None:intergenic | 55.0% | |
| CCGGAGAGATGGTTGAAGGA+TGG | + | chr4_3:43187050-43187069 | Msa0641960:CDS | 55.0% | |
| CTCGACCCCGCTTGAAAAAC+CGG | - | chr4_3:43187107-43187126 | None:intergenic | 55.0% | |
| !!! | GGTTTTTCAAGCGGGGTCGA+GGG | + | chr4_3:43187106-43187125 | Msa0641960:CDS | 55.0% |
| GCAAACTGCGGCTCTTGGTT+CGG | - | chr4_3:43187218-43187237 | None:intergenic | 55.0% | |
| CGGCAAACCACCTCTAAACG+AGG | - | chr4_3:43187255-43187274 | None:intergenic | 55.0% | |
| CACGGCCAAGAAGATCACCA+AGG | - | chr4_3:43186089-43186108 | None:intergenic | 55.0% | |
| ! | CTTGGTGATCTTCTTGGCCG+TGG | + | chr4_3:43186087-43186106 | Msa0641960:CDS | 55.0% |
| ACCGTTGCTTCCGCGTTAAC+CGG | + | chr4_3:43186720-43186739 | Msa0641960:CDS | 55.0% | |
| ACCGGTTAACGCGGAAGCAA+CGG | - | chr4_3:43186724-43186743 | None:intergenic | 55.0% | |
| GTGGAAGAACCCGAAAGTGG+AGG | + | chr4_3:43186758-43186777 | Msa0641960:CDS | 55.0% | |
| AAGTAGCGCACTCTTGAGCC+GGG | - | chr4_3:43186818-43186837 | None:intergenic | 55.0% | |
| CCATCCGACCCATAGCATAC+GGG | - | chr4_3:43186995-43187014 | None:intergenic | 55.0% | |
| CCGGAGAGATGGTTGAAGGA+TGG | + | chr4_3:43187050-43187069 | Msa0641960:CDS | 55.0% | |
| CTCGACCCCGCTTGAAAAAC+CGG | - | chr4_3:43187107-43187126 | None:intergenic | 55.0% | |
| !!! | GGTTTTTCAAGCGGGGTCGA+GGG | + | chr4_3:43187106-43187125 | Msa0641960:CDS | 55.0% |
| GCAAACTGCGGCTCTTGGTT+CGG | - | chr4_3:43187218-43187237 | None:intergenic | 55.0% | |
| CGGCAAACCACCTCTAAACG+AGG | - | chr4_3:43187255-43187274 | None:intergenic | 55.0% | |
| CCCGTATGCTATGGGTCGGA+TGG | + | chr4_3:43186992-43187011 | Msa0641960:CDS | 60.0% | |
| !!! | CGGTTTTTCAAGCGGGGTCG+AGG | + | chr4_3:43187105-43187124 | Msa0641960:CDS | 60.0% |
| ! | AGCGGGGTCGAGGGTTTGTT+TGG | + | chr4_3:43187115-43187134 | Msa0641960:CDS | 60.0% |
| ! | GCGGGGTCGAGGGTTTGTTT+GGG | + | chr4_3:43187116-43187135 | Msa0641960:CDS | 60.0% |
| CAAGAGCCGCAGTTTGCACC+CGG | + | chr4_3:43187221-43187240 | Msa0641960:CDS | 60.0% | |
| CCCGTATGCTATGGGTCGGA+TGG | + | chr4_3:43186992-43187011 | Msa0641960:CDS | 60.0% | |
| !!! | CGGTTTTTCAAGCGGGGTCG+AGG | + | chr4_3:43187105-43187124 | Msa0641960:CDS | 60.0% |
| ! | AGCGGGGTCGAGGGTTTGTT+TGG | + | chr4_3:43187115-43187134 | Msa0641960:CDS | 60.0% |
| ! | GCGGGGTCGAGGGTTTGTTT+GGG | + | chr4_3:43187116-43187135 | Msa0641960:CDS | 60.0% |
| CAAGAGCCGCAGTTTGCACC+CGG | + | chr4_3:43187221-43187240 | Msa0641960:CDS | 60.0% | |
| CGGGTGCAAACTGCGGCTCT+TGG | - | chr4_3:43187223-43187242 | None:intergenic | 65.0% | |
| CGGGTGCAAACTGCGGCTCT+TGG | - | chr4_3:43187223-43187242 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 43185901 | 43187298 | 43185901 | ID=Msa0641960;Name=Msa0641960 |
| chr4_3 | mRNA | 43185901 | 43187298 | 43185901 | ID=Msa0641960-mRNA-1;Parent=Msa0641960;Name=Msa0641960-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|465 |
| chr4_3 | exon | 43185901 | 43187298 | 43185901 | ID=Msa0641960-mRNA-1:exon:9725;Parent=Msa0641960-mRNA-1 |
| chr4_3 | CDS | 43185901 | 43187298 | 43185901 | ID=Msa0641960-mRNA-1:cds;Parent=Msa0641960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
