AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0576180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576180 MtrunA17_Chr8g0392551 98.997 299 0 1 1 299 1 296 0.0 602
Msa0576180 MtrunA17_Chr6g0483441 67.105 304 85 4 1 299 1 294 5.72e-139 394
Msa0576180 MtrunA17_Chr4g0053001 54.232 319 126 7 1 299 12 330 3.42e-103 305
Msa0576180 MtrunA17_Chr2g0331671 43.910 312 158 8 1 299 2 309 2.29e-78 240
Msa0576180 MtrunA17_Chr4g0038691 43.939 330 135 10 1 298 6 317 3.62e-72 225
Msa0576180 MtrunA17_Chr6g0486001 40.498 321 154 10 1 299 1 306 8.81e-66 208
Msa0576180 MtrunA17_Chr3g0091821 36.970 165 85 4 143 299 41 194 3.23e-28 107
Msa0576180 MtrunA17_Chr3g0090061 25.566 309 171 9 25 281 28 329 6.61e-18 82.8
Msa0576180 MtrunA17_Chr8g0379281 35.789 190 95 6 20 206 21 186 4.52e-17 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576180 AT1G45688.1 56.213 338 107 4 1 297 1 338 7.25e-124 358
Msa0576180 AT5G42860.1 56.832 322 108 5 1 297 1 316 1.20e-111 326
Msa0576180 AT1G45688.2 60.084 238 71 4 1 214 1 238 8.81e-94 278
Msa0576180 AT4G35170.1 37.037 297 169 7 14 297 6 297 6.68e-58 188
Msa0576180 AT2G41990.1 40.836 311 153 9 1 296 1 295 2.08e-55 181
Msa0576180 AT3G24605.1 35.616 292 156 8 1 277 3 277 3.26e-43 150
Msa0576180 AT3G24600.1 35.714 308 178 9 1 296 2 301 4.30e-40 142
Msa0576180 AT3G08490.1 25.357 280 177 10 26 296 11 267 2.03e-13 69.3

Find 105 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTCCTTGCTTTCATTCT+TGG 0.127415 4_1:+80259836 Msa0576180:CDS
AGCTTATGTGCTTGGGAAAT+TGG 0.250083 4_1:+80260688 Msa0576180:CDS
TGTCCCATCATGTGGTAATA+AGG 0.257475 4_1:+80261080 Msa0576180:three_prime_UTR
TGTTGTTGTTGTTGAGTTTC+CGG 0.258136 4_1:-80259709 None:intergenic
ATCAATTTCCTTCCATGGTT+TGG 0.270924 4_1:-80259750 None:intergenic
TCCTATTCAGAAATCGTAAT+TGG 0.272853 4_1:+80260185 Msa0576180:CDS
TTAGTTCCATACATGAAAAT+TGG 0.288643 4_1:-80261338 None:intergenic
ATTCATATTCATTGCTTGTT+GGG 0.299718 4_1:+80259382 Msa0576180:five_prime_UTR
TCAAAATGTGACAATTAAAA+AGG 0.301948 4_1:+80259295 None:intergenic
GAAACCCCATGTCATGATTA+AGG 0.315871 4_1:+80259916 Msa0576180:CDS
TGAATTATTCTTTGATTAGT+TGG 0.322680 4_1:+80261228 Msa0576180:three_prime_UTR
GCCAATTACGATTTCTGAAT+AGG 0.334846 4_1:-80260186 None:intergenic
AATCATGACATGGGGTTTCA+TGG 0.345102 4_1:-80259912 None:intergenic
AACGAATGATTCAACTGTTT+CGG 0.350373 4_1:-80261185 None:intergenic
ATCATAGAAAAGTGATTCAT+TGG 0.358061 4_1:+80260869 Msa0576180:three_prime_UTR
CCATTCCACTTCTCAATCAT+AGG 0.363070 4_1:-80260801 None:intergenic
GAGAGAAAAGAGTGAACAAA+AGG 0.373174 4_1:-80259865 None:intergenic
CAAACCAAAATACTACAAAA+AGG 0.374910 4_1:+80260712 Msa0576180:CDS
GATGAAGAAGCACATGGAAA+TGG 0.376069 4_1:+80260830 Msa0576180:three_prime_UTR
GTTGTTGTTGTTGAGTTTCC+GGG 0.380866 4_1:-80259708 None:intergenic
TTTAATGGCACTGGTAAAGT+TGG 0.388529 4_1:-80260641 None:intergenic
GAACCCATTGGGCTGATAAC+AGG 0.388750 4_1:-80259644 None:intergenic
TATTCATATTCATTGCTTGT+TGG 0.397663 4_1:+80259381 Msa0576180:five_prime_UTR
TAAAGAAAGAAAGACATGTT+TGG 0.407442 4_1:+80261004 Msa0576180:three_prime_UTR
TATGTATTATAAGCTCCATA+TGG 0.416758 4_1:+80261265 Msa0576180:three_prime_UTR
AGATCTAGAGCTTATGTGCT+TGG 0.422698 4_1:+80260680 Msa0576180:CDS
ATCATTCTCTTTCTCGTCGT+TGG 0.425007 4_1:+80259813 Msa0576180:CDS
AAGAAAGACATGTTTGGATT+CGG 0.431336 4_1:+80261010 Msa0576180:three_prime_UTR
GATCTAGAGCTTATGTGCTT+GGG 0.431536 4_1:+80260681 Msa0576180:CDS
GAAGCACATGGAAATGGAAA+TGG 0.433427 4_1:+80260836 Msa0576180:three_prime_UTR
TCTTCCTCTAGCCGTTTCTC+TGG 0.434741 4_1:+80259683 Msa0576180:CDS
AGAAAGGGAAATTGCATTAG+TGG 0.443020 4_1:-80259336 None:intergenic
CTAGCCGTTTCTCTGGTTCC+CGG 0.451437 4_1:+80259690 Msa0576180:CDS
ATCATGTGGTAATAAGGTTA+AGG 0.451693 4_1:+80261086 Msa0576180:three_prime_UTR
ATTACATCAATTTCCTTCCA+TGG 0.454352 4_1:-80259755 None:intergenic
CAGCTCATAGGAATAAGAAA+TGG 0.459545 4_1:+80260915 Msa0576180:three_prime_UTR
AGTAGAATGAAAGGAGGTAG+TGG 0.462601 4_1:-80259621 None:intergenic
AATCGGTGACTTCACCCATA+TGG 0.464525 4_1:-80261280 None:intergenic
TTCATATTCATTGCTTGTTG+GGG 0.465718 4_1:+80259383 Msa0576180:five_prime_UTR
TACTATGAGTAGTACAAGAA+AGG 0.468920 4_1:-80259352 None:intergenic
GCTAGTCTTAGCAGCACAAC+TGG 0.471971 4_1:+80260614 Msa0576180:CDS
ACTCCTGTTATCAGCCCAAT+GGG 0.481587 4_1:+80259641 Msa0576180:CDS
ACGAAGGGGATACAGCTCAT+AGG 0.488260 4_1:+80260903 Msa0576180:three_prime_UTR
ATTAGTGAGTGTGGCAGTGA+TGG 0.497703 4_1:+80260562 Msa0576180:CDS
TTAACCTTATTACCACATGA+TGG 0.499610 4_1:-80261084 None:intergenic
TAGCACCACTTCCATACAAT+GGG 0.499784 4_1:-80260595 None:intergenic
AGTACGTAGTAGATTAGATC+TGG 0.501041 4_1:-80259457 None:intergenic
TCCATGGTTTGGTGTTACTA+CGG 0.502227 4_1:-80259739 None:intergenic
GGAAGCAAGATCCCATTGTA+TGG 0.504734 4_1:+80260584 Msa0576180:CDS
ATCATGACATGGGGTTTCAT+GGG 0.508587 4_1:-80259911 None:intergenic
TCTGAATAGGATAGATCTAA+AGG 0.513188 4_1:-80260173 None:intergenic
AATGAGGAGGAGAACCCATT+GGG 0.513468 4_1:-80259655 None:intergenic
CTGGCCATCTTACTTACAAT+CGG 0.515333 4_1:-80261297 None:intergenic
CAAGCTGGTTCAGATGCAAC+CGG 0.516787 4_1:+80260059 Msa0576180:CDS
TACTCCTGTTATCAGCCCAA+TGG 0.518448 4_1:+80259640 Msa0576180:CDS
GTTCCATACATGAAAATTGG+CGG 0.521220 4_1:-80261335 None:intergenic
AAAGACATGTTTGGATTCGG+TGG 0.522071 4_1:+80261013 Msa0576180:three_prime_UTR
CTACTAGAACTTAGAGAATG+TGG 0.532410 4_1:-80260979 None:intergenic
ACTATGAGTAGTACAAGAAA+GGG 0.532737 4_1:-80259351 None:intergenic
ATGAAAATTGGCGGTGTGTG+TGG 0.535809 4_1:-80261326 None:intergenic
ATGTATTATAAGCTCCATAT+GGG 0.538211 4_1:+80261266 Msa0576180:three_prime_UTR
AAGATCCCATTGTATGGAAG+TGG 0.539938 4_1:+80260590 Msa0576180:CDS
TCAGAAATCGTAATTGGCAC+TGG 0.540742 4_1:+80260191 Msa0576180:CDS
TAACCTTATTACCACATGAT+GGG 0.541635 4_1:-80261083 None:intergenic
TTAGTGAGTGTGGCAGTGAT+GGG 0.543651 4_1:+80260563 Msa0576180:CDS
CATAGGTGCAAGACTTCTTG+AGG 0.543718 4_1:-80260784 None:intergenic
ATTGATGTAATTGAAGAAGA+AGG 0.546086 4_1:+80259767 Msa0576180:CDS
AAAAGCCAAGAATGAAAGCA+AGG 0.553973 4_1:-80259841 None:intergenic
ATAGGTGCAAGACTTCTTGA+GGG 0.555809 4_1:-80260783 None:intergenic
CTAGAGGAAGAGTGAGAATG+AGG 0.556981 4_1:-80259671 None:intergenic
AGCAATGAATATGAATATGA+AGG 0.559601 4_1:-80259375 None:intergenic
GAATGAGGAGGAGAACCCAT+TGG 0.564529 4_1:-80259656 None:intergenic
TGATTGAGAAGTGGAATGGA+AGG 0.574446 4_1:+80260805 Msa0576180:exon
GGACTTTGAACATAGTATGC+TGG 0.578237 4_1:-80259578 None:intergenic
GATAACAGGAGTAGAATGAA+AGG 0.579520 4_1:-80259630 None:intergenic
GAGCATGTTAGAGTTCAAGC+TGG 0.583891 4_1:+80260044 Msa0576180:CDS
TAGTAACACCAAACCATGGA+AGG 0.584156 4_1:+80259742 Msa0576180:CDS
AACAGGAGTAGAATGAAAGG+AGG 0.584271 4_1:-80259627 None:intergenic
GTCACCGATTGTAAGTAAGA+TGG 0.588307 4_1:+80261293 Msa0576180:three_prime_UTR
GTATACCTTAATCATGACAT+GGG 0.588377 4_1:-80259921 None:intergenic
GAGGAAGAGTGAGAATGAGG+AGG 0.592438 4_1:-80259668 None:intergenic
GTTCAAAGTCCATCCCATGA+TGG 0.593197 4_1:+80259590 Msa0576180:CDS
GAAATTCACTTATCGTAACA+AGG 0.596007 4_1:+80260118 Msa0576180:CDS
GTTTCCGGGAACCAGAGAAA+CGG 0.599995 4_1:-80259694 None:intergenic
CCTATGATTGAGAAGTGGAA+TGG 0.605678 4_1:+80260801 Msa0576180:exon
TTGCACCTATGATTGAGAAG+TGG 0.608398 4_1:+80260796 Msa0576180:exon
AGTATACCTTAATCATGACA+TGG 0.609619 4_1:-80259922 None:intergenic
CTAGCACCACTTCCATACAA+TGG 0.615096 4_1:-80260596 None:intergenic
GAGTCAAAGATTAGTGAGTG+TGG 0.625033 4_1:+80260553 Msa0576180:CDS
TGGGTCTGCTAGCACCCCAA+AGG 0.632476 4_1:-80259892 None:intergenic
ACATAGTATGCTGGTCGACG+AGG 0.635101 4_1:-80259569 None:intergenic
ATTCACTGTAATCATATCAG+TGG 0.649253 4_1:-80260087 None:intergenic
ATAGGATAGATCTAAAGGTG+TGG 0.651020 4_1:-80260168 None:intergenic
AATCATATCAGTGGCCACGC+CGG 0.653079 4_1:-80260078 None:intergenic
GCGGTGTGTGTGGAACAAGC+TGG 0.656733 4_1:-80261316 None:intergenic
TGGTTCAGATGCAACCGGCG+TGG 0.661460 4_1:+80260064 Msa0576180:CDS
GGAACCAGAGAAACGGCTAG+AGG 0.666320 4_1:-80259687 None:intergenic
AAATTCACTTATCGTAACAA+GGG 0.671507 4_1:+80260119 Msa0576180:CDS
ATGGTTTGGTGTTACTACGG+TGG 0.675852 4_1:-80259736 None:intergenic
AGTAGATTAGATCTGGTGAG+TGG 0.681105 4_1:-80259450 None:intergenic
ACCGTAGTAACACCAAACCA+TGG 0.681305 4_1:+80259738 Msa0576180:CDS
TATACCTTAATCATGACATG+GGG 0.686791 4_1:-80259920 None:intergenic
AAGGAAGATGAAGAAGCACA+TGG 0.687158 4_1:+80260824 Msa0576180:three_prime_UTR
GCATACTAAGACAGACTCAG+AGG 0.699072 4_1:+80259511 Msa0576180:CDS
TCGACGAGGAGATCTTGTTG+TGG 0.700688 4_1:-80259555 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTGTTATGTCAAAT+GGG + chr4_1:80259973-80259992 Msa0576180:intron 15.0%
!! CAAAATTAAAAAGTAGAAAA+AGG - chr4_1:80261062-80261081 None:intergenic 15.0%
!!! TTTTAATTGTTATGTCAAAT+GGG + chr4_1:80259973-80259992 Msa0576180:intron 15.0%
!! CAAAATTAAAAAGTAGAAAA+AGG - chr4_1:80261062-80261081 None:intergenic 15.0%
!!! CTTTTAATTGTTATGTCAAA+TGG + chr4_1:80259972-80259991 Msa0576180:intron 20.0%
!! TGAATTATTCTTTGATTAGT+TGG + chr4_1:80261228-80261247 Msa0576180:three_prime_UTR 20.0%
!!! CTTTTAATTGTTATGTCAAA+TGG + chr4_1:80259972-80259991 Msa0576180:intron 20.0%
!! TGAATTATTCTTTGATTAGT+TGG + chr4_1:80261228-80261247 Msa0576180:three_prime_UTR 20.0%
! AGCAATGAATATGAATATGA+AGG - chr4_1:80259378-80259397 None:intergenic 25.0%
! TATTCATATTCATTGCTTGT+TGG + chr4_1:80259381-80259400 Msa0576180:five_prime_UTR 25.0%
! ATTCATATTCATTGCTTGTT+GGG + chr4_1:80259382-80259401 Msa0576180:five_prime_UTR 25.0%
! ATTGATGTAATTGAAGAAGA+AGG + chr4_1:80259767-80259786 Msa0576180:CDS 25.0%
! AAATTCACTTATCGTAACAA+GGG + chr4_1:80260119-80260138 Msa0576180:CDS 25.0%
! ATATGATTATCGTGTAAACT+CGG - chr4_1:80260328-80260347 None:intergenic 25.0%
!! TGTGTATCAATCTTTTTCTT+TGG + chr4_1:80260490-80260509 Msa0576180:intron 25.0%
!!! TGAAGAAGTTTTATCAATCA+AGG + chr4_1:80260528-80260547 Msa0576180:CDS 25.0%
!! ATCTCAAAGCTCAATTTTAA+TGG - chr4_1:80260659-80260678 None:intergenic 25.0%
! CAAACCAAAATACTACAAAA+AGG + chr4_1:80260712-80260731 Msa0576180:CDS 25.0%
!! TGAACCTTTTTGTAGTATTT+TGG - chr4_1:80260719-80260738 None:intergenic 25.0%
!!! ACAGAAACATTGATTTTCTT+GGG - chr4_1:80260761-80260780 None:intergenic 25.0%
!!! AACAGAAACATTGATTTTCT+TGG - chr4_1:80260762-80260781 None:intergenic 25.0%
! ATCATAGAAAAGTGATTCAT+TGG + chr4_1:80260869-80260888 Msa0576180:three_prime_UTR 25.0%
! TAAAGAAAGAAAGACATGTT+TGG + chr4_1:80261004-80261023 Msa0576180:three_prime_UTR 25.0%
! TATGTATTATAAGCTCCATA+TGG + chr4_1:80261265-80261284 Msa0576180:three_prime_UTR 25.0%
! ATGTATTATAAGCTCCATAT+GGG + chr4_1:80261266-80261285 Msa0576180:three_prime_UTR 25.0%
! AGCAATGAATATGAATATGA+AGG - chr4_1:80259378-80259397 None:intergenic 25.0%
! TATTCATATTCATTGCTTGT+TGG + chr4_1:80259381-80259400 Msa0576180:five_prime_UTR 25.0%
! ATTCATATTCATTGCTTGTT+GGG + chr4_1:80259382-80259401 Msa0576180:five_prime_UTR 25.0%
! ATTGATGTAATTGAAGAAGA+AGG + chr4_1:80259767-80259786 Msa0576180:CDS 25.0%
! AAATTCACTTATCGTAACAA+GGG + chr4_1:80260119-80260138 Msa0576180:CDS 25.0%
! ATATGATTATCGTGTAAACT+CGG - chr4_1:80260328-80260347 None:intergenic 25.0%
!! TGTGTATCAATCTTTTTCTT+TGG + chr4_1:80260490-80260509 Msa0576180:intron 25.0%
!!! TGAAGAAGTTTTATCAATCA+AGG + chr4_1:80260528-80260547 Msa0576180:CDS 25.0%
!! ATCTCAAAGCTCAATTTTAA+TGG - chr4_1:80260659-80260678 None:intergenic 25.0%
! CAAACCAAAATACTACAAAA+AGG + chr4_1:80260712-80260731 Msa0576180:CDS 25.0%
!! TGAACCTTTTTGTAGTATTT+TGG - chr4_1:80260719-80260738 None:intergenic 25.0%
!!! ACAGAAACATTGATTTTCTT+GGG - chr4_1:80260761-80260780 None:intergenic 25.0%
!!! AACAGAAACATTGATTTTCT+TGG - chr4_1:80260762-80260781 None:intergenic 25.0%
! ATCATAGAAAAGTGATTCAT+TGG + chr4_1:80260869-80260888 Msa0576180:three_prime_UTR 25.0%
! TAAAGAAAGAAAGACATGTT+TGG + chr4_1:80261004-80261023 Msa0576180:three_prime_UTR 25.0%
! TATGTATTATAAGCTCCATA+TGG + chr4_1:80261265-80261284 Msa0576180:three_prime_UTR 25.0%
! ATGTATTATAAGCTCCATAT+GGG + chr4_1:80261266-80261285 Msa0576180:three_prime_UTR 25.0%
ACTATGAGTAGTACAAGAAA+GGG - chr4_1:80259354-80259373 None:intergenic 30.0%
TACTATGAGTAGTACAAGAA+AGG - chr4_1:80259355-80259374 None:intergenic 30.0%
! TTCATATTCATTGCTTGTTG+GGG + chr4_1:80259383-80259402 Msa0576180:five_prime_UTR 30.0%
CTCTCAAACAAAAAGAAAAG+AGG - chr4_1:80259410-80259429 None:intergenic 30.0%
ATTACATCAATTTCCTTCCA+TGG - chr4_1:80259758-80259777 None:intergenic 30.0%
TATTTCCTTGCTTTCATTCT+TGG + chr4_1:80259836-80259855 Msa0576180:CDS 30.0%
! TCTTTTCTCTCTTATCCTTT+GGG + chr4_1:80259877-80259896 Msa0576180:CDS 30.0%
TATACCTTAATCATGACATG+GGG - chr4_1:80259923-80259942 None:intergenic 30.0%
GTATACCTTAATCATGACAT+GGG - chr4_1:80259924-80259943 None:intergenic 30.0%
AGTATACCTTAATCATGACA+TGG - chr4_1:80259925-80259944 None:intergenic 30.0%
ATTCACTGTAATCATATCAG+TGG - chr4_1:80260090-80260109 None:intergenic 30.0%
GAAATTCACTTATCGTAACA+AGG + chr4_1:80260118-80260137 Msa0576180:CDS 30.0%
TCTGAATAGGATAGATCTAA+AGG - chr4_1:80260176-80260195 None:intergenic 30.0%
TCCTATTCAGAAATCGTAAT+TGG + chr4_1:80260185-80260204 Msa0576180:CDS 30.0%
GAATTCAGATTGATTGCAAT+CGG + chr4_1:80260296-80260315 Msa0576180:intron 30.0%
TATGATTATCGTGTAAACTC+GGG - chr4_1:80260327-80260346 None:intergenic 30.0%
!! AGAAGTTTTATCAATCAAGG+AGG + chr4_1:80260531-80260550 Msa0576180:CDS 30.0%
ATTGGTTGAGTAAAAAACGA+AGG + chr4_1:80260887-80260906 Msa0576180:three_prime_UTR 30.0%
TTGGTTGAGTAAAAAACGAA+GGG + chr4_1:80260888-80260907 Msa0576180:three_prime_UTR 30.0%
AAGAAAGACATGTTTGGATT+CGG + chr4_1:80261010-80261029 Msa0576180:three_prime_UTR 30.0%
!! TTTAATTTTGTCCCATCATG+TGG + chr4_1:80261072-80261091 Msa0576180:three_prime_UTR 30.0%
TAACCTTATTACCACATGAT+GGG - chr4_1:80261086-80261105 None:intergenic 30.0%
TTAACCTTATTACCACATGA+TGG - chr4_1:80261087-80261106 None:intergenic 30.0%
ATCATGTGGTAATAAGGTTA+AGG + chr4_1:80261086-80261105 Msa0576180:three_prime_UTR 30.0%
AACGAATGATTCAACTGTTT+CGG - chr4_1:80261188-80261207 None:intergenic 30.0%
ACTATGAGTAGTACAAGAAA+GGG - chr4_1:80259354-80259373 None:intergenic 30.0%
TACTATGAGTAGTACAAGAA+AGG - chr4_1:80259355-80259374 None:intergenic 30.0%
! TTCATATTCATTGCTTGTTG+GGG + chr4_1:80259383-80259402 Msa0576180:five_prime_UTR 30.0%
CTCTCAAACAAAAAGAAAAG+AGG - chr4_1:80259410-80259429 None:intergenic 30.0%
ATTACATCAATTTCCTTCCA+TGG - chr4_1:80259758-80259777 None:intergenic 30.0%
TATTTCCTTGCTTTCATTCT+TGG + chr4_1:80259836-80259855 Msa0576180:CDS 30.0%
! TCTTTTCTCTCTTATCCTTT+GGG + chr4_1:80259877-80259896 Msa0576180:CDS 30.0%
TATACCTTAATCATGACATG+GGG - chr4_1:80259923-80259942 None:intergenic 30.0%
GTATACCTTAATCATGACAT+GGG - chr4_1:80259924-80259943 None:intergenic 30.0%
AGTATACCTTAATCATGACA+TGG - chr4_1:80259925-80259944 None:intergenic 30.0%
ATTCACTGTAATCATATCAG+TGG - chr4_1:80260090-80260109 None:intergenic 30.0%
GAAATTCACTTATCGTAACA+AGG + chr4_1:80260118-80260137 Msa0576180:CDS 30.0%
TCTGAATAGGATAGATCTAA+AGG - chr4_1:80260176-80260195 None:intergenic 30.0%
TCCTATTCAGAAATCGTAAT+TGG + chr4_1:80260185-80260204 Msa0576180:CDS 30.0%
GAATTCAGATTGATTGCAAT+CGG + chr4_1:80260296-80260315 Msa0576180:intron 30.0%
TATGATTATCGTGTAAACTC+GGG - chr4_1:80260327-80260346 None:intergenic 30.0%
!! AGAAGTTTTATCAATCAAGG+AGG + chr4_1:80260531-80260550 Msa0576180:CDS 30.0%
ATTGGTTGAGTAAAAAACGA+AGG + chr4_1:80260887-80260906 Msa0576180:three_prime_UTR 30.0%
TTGGTTGAGTAAAAAACGAA+GGG + chr4_1:80260888-80260907 Msa0576180:three_prime_UTR 30.0%
AAGAAAGACATGTTTGGATT+CGG + chr4_1:80261010-80261029 Msa0576180:three_prime_UTR 30.0%
!! TTTAATTTTGTCCCATCATG+TGG + chr4_1:80261072-80261091 Msa0576180:three_prime_UTR 30.0%
TAACCTTATTACCACATGAT+GGG - chr4_1:80261086-80261105 None:intergenic 30.0%
TTAACCTTATTACCACATGA+TGG - chr4_1:80261087-80261106 None:intergenic 30.0%
ATCATGTGGTAATAAGGTTA+AGG + chr4_1:80261086-80261105 Msa0576180:three_prime_UTR 30.0%
AACGAATGATTCAACTGTTT+CGG - chr4_1:80261188-80261207 None:intergenic 30.0%
AGAAAGGGAAATTGCATTAG+TGG - chr4_1:80259339-80259358 None:intergenic 35.0%
AGTACGTAGTAGATTAGATC+TGG - chr4_1:80259460-80259479 None:intergenic 35.0%
!!! AGTGGTTTTTTCACCATCAT+GGG - chr4_1:80259606-80259625 None:intergenic 35.0%
!!! TAGTGGTTTTTTCACCATCA+TGG - chr4_1:80259607-80259626 None:intergenic 35.0%
GATAACAGGAGTAGAATGAA+AGG - chr4_1:80259633-80259652 None:intergenic 35.0%
! TGTTGTTGTTGTTGAGTTTC+CGG - chr4_1:80259712-80259731 None:intergenic 35.0%
ATCAATTTCCTTCCATGGTT+TGG - chr4_1:80259753-80259772 None:intergenic 35.0%
AAAAGCCAAGAATGAAAGCA+AGG - chr4_1:80259844-80259863 None:intergenic 35.0%
GAGAGAAAAGAGTGAACAAA+AGG - chr4_1:80259868-80259887 None:intergenic 35.0%
! CTCTTTTCTCTCTTATCCTT+TGG + chr4_1:80259876-80259895 Msa0576180:CDS 35.0%
! CTTTTCTCTCTTATCCTTTG+GGG + chr4_1:80259878-80259897 Msa0576180:CDS 35.0%
ATAGGATAGATCTAAAGGTG+TGG - chr4_1:80260171-80260190 None:intergenic 35.0%
GCCAATTACGATTTCTGAAT+AGG - chr4_1:80260189-80260208 None:intergenic 35.0%
ACAACAATCGATACACTGAT+TGG + chr4_1:80260402-80260421 Msa0576180:intron 35.0%
!! TTTAATGGCACTGGTAAAGT+TGG - chr4_1:80260644-80260663 None:intergenic 35.0%
!! AAGCTCAATTTTAATGGCAC+TGG - chr4_1:80260653-80260672 None:intergenic 35.0%
TGGTTGAGTAAAAAACGAAG+GGG + chr4_1:80260889-80260908 Msa0576180:three_prime_UTR 35.0%
CAGCTCATAGGAATAAGAAA+TGG + chr4_1:80260915-80260934 Msa0576180:three_prime_UTR 35.0%
! AATGGAAAAACGCGTTTTTG+TGG + chr4_1:80260933-80260952 Msa0576180:three_prime_UTR 35.0%
! ATGGAAAAACGCGTTTTTGT+GGG + chr4_1:80260934-80260953 Msa0576180:three_prime_UTR 35.0%
CTACTAGAACTTAGAGAATG+TGG - chr4_1:80260982-80261001 None:intergenic 35.0%
AGAAAGGGAAATTGCATTAG+TGG - chr4_1:80259339-80259358 None:intergenic 35.0%
AGTACGTAGTAGATTAGATC+TGG - chr4_1:80259460-80259479 None:intergenic 35.0%
!!! AGTGGTTTTTTCACCATCAT+GGG - chr4_1:80259606-80259625 None:intergenic 35.0%
!!! TAGTGGTTTTTTCACCATCA+TGG - chr4_1:80259607-80259626 None:intergenic 35.0%
GATAACAGGAGTAGAATGAA+AGG - chr4_1:80259633-80259652 None:intergenic 35.0%
! TGTTGTTGTTGTTGAGTTTC+CGG - chr4_1:80259712-80259731 None:intergenic 35.0%
ATCAATTTCCTTCCATGGTT+TGG - chr4_1:80259753-80259772 None:intergenic 35.0%
AAAAGCCAAGAATGAAAGCA+AGG - chr4_1:80259844-80259863 None:intergenic 35.0%
GAGAGAAAAGAGTGAACAAA+AGG - chr4_1:80259868-80259887 None:intergenic 35.0%
! CTCTTTTCTCTCTTATCCTT+TGG + chr4_1:80259876-80259895 Msa0576180:CDS 35.0%
! CTTTTCTCTCTTATCCTTTG+GGG + chr4_1:80259878-80259897 Msa0576180:CDS 35.0%
ATAGGATAGATCTAAAGGTG+TGG - chr4_1:80260171-80260190 None:intergenic 35.0%
GCCAATTACGATTTCTGAAT+AGG - chr4_1:80260189-80260208 None:intergenic 35.0%
ACAACAATCGATACACTGAT+TGG + chr4_1:80260402-80260421 Msa0576180:intron 35.0%
!! TTTAATGGCACTGGTAAAGT+TGG - chr4_1:80260644-80260663 None:intergenic 35.0%
!! AAGCTCAATTTTAATGGCAC+TGG - chr4_1:80260653-80260672 None:intergenic 35.0%
TGGTTGAGTAAAAAACGAAG+GGG + chr4_1:80260889-80260908 Msa0576180:three_prime_UTR 35.0%
CAGCTCATAGGAATAAGAAA+TGG + chr4_1:80260915-80260934 Msa0576180:three_prime_UTR 35.0%
! AATGGAAAAACGCGTTTTTG+TGG + chr4_1:80260933-80260952 Msa0576180:three_prime_UTR 35.0%
! ATGGAAAAACGCGTTTTTGT+GGG + chr4_1:80260934-80260953 Msa0576180:three_prime_UTR 35.0%
CTACTAGAACTTAGAGAATG+TGG - chr4_1:80260982-80261001 None:intergenic 35.0%
AGTAGATTAGATCTGGTGAG+TGG - chr4_1:80259453-80259472 None:intergenic 40.0%
GGACTTTGAACATAGTATGC+TGG - chr4_1:80259581-80259600 None:intergenic 40.0%
!!! GTTTTTTCACCATCATGGGA+TGG - chr4_1:80259602-80259621 None:intergenic 40.0%
AGTAGAATGAAAGGAGGTAG+TGG - chr4_1:80259624-80259643 None:intergenic 40.0%
AACAGGAGTAGAATGAAAGG+AGG - chr4_1:80259630-80259649 None:intergenic 40.0%
! GTTGTTGTTGTTGAGTTTCC+GGG - chr4_1:80259711-80259730 None:intergenic 40.0%
!! TCCATGGTTTGGTGTTACTA+CGG - chr4_1:80259742-80259761 None:intergenic 40.0%
TAGTAACACCAAACCATGGA+AGG + chr4_1:80259742-80259761 Msa0576180:CDS 40.0%
ATCATTCTCTTTCTCGTCGT+TGG + chr4_1:80259813-80259832 Msa0576180:CDS 40.0%
ATCATGACATGGGGTTTCAT+GGG - chr4_1:80259914-80259933 None:intergenic 40.0%
AATCATGACATGGGGTTTCA+TGG - chr4_1:80259915-80259934 None:intergenic 40.0%
GAAACCCCATGTCATGATTA+AGG + chr4_1:80259916-80259935 Msa0576180:CDS 40.0%
!!! CGTAACAAGGGCACATTTTT+TGG + chr4_1:80260131-80260150 Msa0576180:CDS 40.0%
TCAGAAATCGTAATTGGCAC+TGG + chr4_1:80260191-80260210 Msa0576180:CDS 40.0%
GTGTCAATGTTGTGTATGTC+TGG + chr4_1:80260258-80260277 Msa0576180:intron 40.0%
GTCACTAGATCGAGATTGAA+TGG + chr4_1:80260353-80260372 Msa0576180:intron 40.0%
GAGTCAAAGATTAGTGAGTG+TGG + chr4_1:80260553-80260572 Msa0576180:CDS 40.0%
AAGATCCCATTGTATGGAAG+TGG + chr4_1:80260590-80260609 Msa0576180:CDS 40.0%
TAGCACCACTTCCATACAAT+GGG - chr4_1:80260598-80260617 None:intergenic 40.0%
! AGATCTAGAGCTTATGTGCT+TGG + chr4_1:80260680-80260699 Msa0576180:CDS 40.0%
! GATCTAGAGCTTATGTGCTT+GGG + chr4_1:80260681-80260700 Msa0576180:CDS 40.0%
AGCTTATGTGCTTGGGAAAT+TGG + chr4_1:80260688-80260707 Msa0576180:CDS 40.0%
ATAGGTGCAAGACTTCTTGA+GGG - chr4_1:80260786-80260805 None:intergenic 40.0%
TTGCACCTATGATTGAGAAG+TGG + chr4_1:80260796-80260815 Msa0576180:exon 40.0%
CCATTCCACTTCTCAATCAT+AGG - chr4_1:80260804-80260823 None:intergenic 40.0%
CCTATGATTGAGAAGTGGAA+TGG + chr4_1:80260801-80260820 Msa0576180:exon 40.0%
TGATTGAGAAGTGGAATGGA+AGG + chr4_1:80260805-80260824 Msa0576180:exon 40.0%
! AAGGAAGATGAAGAAGCACA+TGG + chr4_1:80260824-80260843 Msa0576180:three_prime_UTR 40.0%
! GATGAAGAAGCACATGGAAA+TGG + chr4_1:80260830-80260849 Msa0576180:three_prime_UTR 40.0%
GAAGCACATGGAAATGGAAA+TGG + chr4_1:80260836-80260855 Msa0576180:three_prime_UTR 40.0%
AAAGACATGTTTGGATTCGG+TGG + chr4_1:80261013-80261032 Msa0576180:three_prime_UTR 40.0%
TGTCCCATCATGTGGTAATA+AGG + chr4_1:80261080-80261099 Msa0576180:three_prime_UTR 40.0%
! GTCACCGATTGTAAGTAAGA+TGG + chr4_1:80261293-80261312 Msa0576180:three_prime_UTR 40.0%
CTGGCCATCTTACTTACAAT+CGG - chr4_1:80261300-80261319 None:intergenic 40.0%
AGTAGATTAGATCTGGTGAG+TGG - chr4_1:80259453-80259472 None:intergenic 40.0%
GGACTTTGAACATAGTATGC+TGG - chr4_1:80259581-80259600 None:intergenic 40.0%
!!! GTTTTTTCACCATCATGGGA+TGG - chr4_1:80259602-80259621 None:intergenic 40.0%
AGTAGAATGAAAGGAGGTAG+TGG - chr4_1:80259624-80259643 None:intergenic 40.0%
AACAGGAGTAGAATGAAAGG+AGG - chr4_1:80259630-80259649 None:intergenic 40.0%
! GTTGTTGTTGTTGAGTTTCC+GGG - chr4_1:80259711-80259730 None:intergenic 40.0%
!! TCCATGGTTTGGTGTTACTA+CGG - chr4_1:80259742-80259761 None:intergenic 40.0%
TAGTAACACCAAACCATGGA+AGG + chr4_1:80259742-80259761 Msa0576180:CDS 40.0%
ATCATTCTCTTTCTCGTCGT+TGG + chr4_1:80259813-80259832 Msa0576180:CDS 40.0%
ATCATGACATGGGGTTTCAT+GGG - chr4_1:80259914-80259933 None:intergenic 40.0%
AATCATGACATGGGGTTTCA+TGG - chr4_1:80259915-80259934 None:intergenic 40.0%
GAAACCCCATGTCATGATTA+AGG + chr4_1:80259916-80259935 Msa0576180:CDS 40.0%
!!! CGTAACAAGGGCACATTTTT+TGG + chr4_1:80260131-80260150 Msa0576180:CDS 40.0%
TCAGAAATCGTAATTGGCAC+TGG + chr4_1:80260191-80260210 Msa0576180:CDS 40.0%
GTGTCAATGTTGTGTATGTC+TGG + chr4_1:80260258-80260277 Msa0576180:intron 40.0%
GTCACTAGATCGAGATTGAA+TGG + chr4_1:80260353-80260372 Msa0576180:intron 40.0%
GAGTCAAAGATTAGTGAGTG+TGG + chr4_1:80260553-80260572 Msa0576180:CDS 40.0%
AAGATCCCATTGTATGGAAG+TGG + chr4_1:80260590-80260609 Msa0576180:CDS 40.0%
TAGCACCACTTCCATACAAT+GGG - chr4_1:80260598-80260617 None:intergenic 40.0%
! AGATCTAGAGCTTATGTGCT+TGG + chr4_1:80260680-80260699 Msa0576180:CDS 40.0%
! GATCTAGAGCTTATGTGCTT+GGG + chr4_1:80260681-80260700 Msa0576180:CDS 40.0%
AGCTTATGTGCTTGGGAAAT+TGG + chr4_1:80260688-80260707 Msa0576180:CDS 40.0%
ATAGGTGCAAGACTTCTTGA+GGG - chr4_1:80260786-80260805 None:intergenic 40.0%
TTGCACCTATGATTGAGAAG+TGG + chr4_1:80260796-80260815 Msa0576180:exon 40.0%
CCATTCCACTTCTCAATCAT+AGG - chr4_1:80260804-80260823 None:intergenic 40.0%
CCTATGATTGAGAAGTGGAA+TGG + chr4_1:80260801-80260820 Msa0576180:exon 40.0%
TGATTGAGAAGTGGAATGGA+AGG + chr4_1:80260805-80260824 Msa0576180:exon 40.0%
! AAGGAAGATGAAGAAGCACA+TGG + chr4_1:80260824-80260843 Msa0576180:three_prime_UTR 40.0%
! GATGAAGAAGCACATGGAAA+TGG + chr4_1:80260830-80260849 Msa0576180:three_prime_UTR 40.0%
GAAGCACATGGAAATGGAAA+TGG + chr4_1:80260836-80260855 Msa0576180:three_prime_UTR 40.0%
AAAGACATGTTTGGATTCGG+TGG + chr4_1:80261013-80261032 Msa0576180:three_prime_UTR 40.0%
TGTCCCATCATGTGGTAATA+AGG + chr4_1:80261080-80261099 Msa0576180:three_prime_UTR 40.0%
! GTCACCGATTGTAAGTAAGA+TGG + chr4_1:80261293-80261312 Msa0576180:three_prime_UTR 40.0%
CTGGCCATCTTACTTACAAT+CGG - chr4_1:80261300-80261319 None:intergenic 40.0%
GCATACTAAGACAGACTCAG+AGG + chr4_1:80259511-80259530 Msa0576180:CDS 45.0%
GTTCAAAGTCCATCCCATGA+TGG + chr4_1:80259590-80259609 Msa0576180:CDS 45.0%
TACTCCTGTTATCAGCCCAA+TGG + chr4_1:80259640-80259659 Msa0576180:CDS 45.0%
ACTCCTGTTATCAGCCCAAT+GGG + chr4_1:80259641-80259660 Msa0576180:CDS 45.0%
AATGAGGAGGAGAACCCATT+GGG - chr4_1:80259658-80259677 None:intergenic 45.0%
CTAGAGGAAGAGTGAGAATG+AGG - chr4_1:80259674-80259693 None:intergenic 45.0%
!! ATGGTTTGGTGTTACTACGG+TGG - chr4_1:80259739-80259758 None:intergenic 45.0%
ACCGTAGTAACACCAAACCA+TGG + chr4_1:80259738-80259757 Msa0576180:CDS 45.0%
GAGCATGTTAGAGTTCAAGC+TGG + chr4_1:80260044-80260063 Msa0576180:CDS 45.0%
ATTAGTGAGTGTGGCAGTGA+TGG + chr4_1:80260562-80260581 Msa0576180:CDS 45.0%
TTAGTGAGTGTGGCAGTGAT+GGG + chr4_1:80260563-80260582 Msa0576180:CDS 45.0%
GGAAGCAAGATCCCATTGTA+TGG + chr4_1:80260584-80260603 Msa0576180:CDS 45.0%
CTAGCACCACTTCCATACAA+TGG - chr4_1:80260599-80260618 None:intergenic 45.0%
CATAGGTGCAAGACTTCTTG+AGG - chr4_1:80260787-80260806 None:intergenic 45.0%
! ACGCGTTTTTGTGGGACTTT+TGG + chr4_1:80260942-80260961 Msa0576180:three_prime_UTR 45.0%
AATCGGTGACTTCACCCATA+TGG - chr4_1:80261283-80261302 None:intergenic 45.0%
GCATACTAAGACAGACTCAG+AGG + chr4_1:80259511-80259530 Msa0576180:CDS 45.0%
GTTCAAAGTCCATCCCATGA+TGG + chr4_1:80259590-80259609 Msa0576180:CDS 45.0%
TACTCCTGTTATCAGCCCAA+TGG + chr4_1:80259640-80259659 Msa0576180:CDS 45.0%
ACTCCTGTTATCAGCCCAAT+GGG + chr4_1:80259641-80259660 Msa0576180:CDS 45.0%
AATGAGGAGGAGAACCCATT+GGG - chr4_1:80259658-80259677 None:intergenic 45.0%
CTAGAGGAAGAGTGAGAATG+AGG - chr4_1:80259674-80259693 None:intergenic 45.0%
!! ATGGTTTGGTGTTACTACGG+TGG - chr4_1:80259739-80259758 None:intergenic 45.0%
ACCGTAGTAACACCAAACCA+TGG + chr4_1:80259738-80259757 Msa0576180:CDS 45.0%
GAGCATGTTAGAGTTCAAGC+TGG + chr4_1:80260044-80260063 Msa0576180:CDS 45.0%
ATTAGTGAGTGTGGCAGTGA+TGG + chr4_1:80260562-80260581 Msa0576180:CDS 45.0%
TTAGTGAGTGTGGCAGTGAT+GGG + chr4_1:80260563-80260582 Msa0576180:CDS 45.0%
GGAAGCAAGATCCCATTGTA+TGG + chr4_1:80260584-80260603 Msa0576180:CDS 45.0%
CTAGCACCACTTCCATACAA+TGG - chr4_1:80260599-80260618 None:intergenic 45.0%
CATAGGTGCAAGACTTCTTG+AGG - chr4_1:80260787-80260806 None:intergenic 45.0%
! ACGCGTTTTTGTGGGACTTT+TGG + chr4_1:80260942-80260961 Msa0576180:three_prime_UTR 45.0%
AATCGGTGACTTCACCCATA+TGG - chr4_1:80261283-80261302 None:intergenic 45.0%
TCGACGAGGAGATCTTGTTG+TGG - chr4_1:80259558-80259577 None:intergenic 50.0%
ACATAGTATGCTGGTCGACG+AGG - chr4_1:80259572-80259591 None:intergenic 50.0%
GAACCCATTGGGCTGATAAC+AGG - chr4_1:80259647-80259666 None:intergenic 50.0%
GAATGAGGAGGAGAACCCAT+TGG - chr4_1:80259659-80259678 None:intergenic 50.0%
GAGGAAGAGTGAGAATGAGG+AGG - chr4_1:80259671-80259690 None:intergenic 50.0%
TCTTCCTCTAGCCGTTTCTC+TGG + chr4_1:80259683-80259702 Msa0576180:CDS 50.0%
GTTTCCGGGAACCAGAGAAA+CGG - chr4_1:80259697-80259716 None:intergenic 50.0%
! CAAGCTGGTTCAGATGCAAC+CGG + chr4_1:80260059-80260078 Msa0576180:CDS 50.0%
AATCATATCAGTGGCCACGC+CGG - chr4_1:80260081-80260100 None:intergenic 50.0%
!! GCTAGTCTTAGCAGCACAAC+TGG + chr4_1:80260614-80260633 Msa0576180:CDS 50.0%
ACGAAGGGGATACAGCTCAT+AGG + chr4_1:80260903-80260922 Msa0576180:three_prime_UTR 50.0%
TCGACGAGGAGATCTTGTTG+TGG - chr4_1:80259558-80259577 None:intergenic 50.0%
ACATAGTATGCTGGTCGACG+AGG - chr4_1:80259572-80259591 None:intergenic 50.0%
GAACCCATTGGGCTGATAAC+AGG - chr4_1:80259647-80259666 None:intergenic 50.0%
GAATGAGGAGGAGAACCCAT+TGG - chr4_1:80259659-80259678 None:intergenic 50.0%
GAGGAAGAGTGAGAATGAGG+AGG - chr4_1:80259671-80259690 None:intergenic 50.0%
TCTTCCTCTAGCCGTTTCTC+TGG + chr4_1:80259683-80259702 Msa0576180:CDS 50.0%
GTTTCCGGGAACCAGAGAAA+CGG - chr4_1:80259697-80259716 None:intergenic 50.0%
! CAAGCTGGTTCAGATGCAAC+CGG + chr4_1:80260059-80260078 Msa0576180:CDS 50.0%
AATCATATCAGTGGCCACGC+CGG - chr4_1:80260081-80260100 None:intergenic 50.0%
!! GCTAGTCTTAGCAGCACAAC+TGG + chr4_1:80260614-80260633 Msa0576180:CDS 50.0%
ACGAAGGGGATACAGCTCAT+AGG + chr4_1:80260903-80260922 Msa0576180:three_prime_UTR 50.0%
GGAACCAGAGAAACGGCTAG+AGG - chr4_1:80259690-80259709 None:intergenic 55.0%
! CTAGCCGTTTCTCTGGTTCC+CGG + chr4_1:80259690-80259709 Msa0576180:CDS 55.0%
GGAACCAGAGAAACGGCTAG+AGG - chr4_1:80259690-80259709 None:intergenic 55.0%
! CTAGCCGTTTCTCTGGTTCC+CGG + chr4_1:80259690-80259709 Msa0576180:CDS 55.0%
TGGGTCTGCTAGCACCCCAA+AGG - chr4_1:80259895-80259914 None:intergenic 60.0%
TGGTTCAGATGCAACCGGCG+TGG + chr4_1:80260064-80260083 Msa0576180:CDS 60.0%
GCGGTGTGTGTGGAACAAGC+TGG - chr4_1:80261319-80261338 None:intergenic 60.0%
TGGGTCTGCTAGCACCCCAA+AGG - chr4_1:80259895-80259914 None:intergenic 60.0%
TGGTTCAGATGCAACCGGCG+TGG + chr4_1:80260064-80260083 Msa0576180:CDS 60.0%
GCGGTGTGTGTGGAACAAGC+TGG - chr4_1:80261319-80261338 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 80259307 80261347 80259307 ID=Msa0576180;Name=Msa0576180
chr4_1 mRNA 80259307 80261347 80259307 ID=Msa0576180-mRNA-1;Parent=Msa0576180;Name=Msa0576180-mRNA-1;_AED=0.04;_eAED=0.04;_QI=202|1|1|1|1|1|3|536|299
chr4_1 exon 80259307 80259937 80259307 ID=Msa0576180-mRNA-1:exon:28626;Parent=Msa0576180-mRNA-1
chr4_1 exon 80260032 80260217 80260032 ID=Msa0576180-mRNA-1:exon:28627;Parent=Msa0576180-mRNA-1
chr4_1 exon 80260527 80261347 80260527 ID=Msa0576180-mRNA-1:exon:28628;Parent=Msa0576180-mRNA-1
chr4_1 five_prime_UTR 80259307 80259508 80259307 ID=Msa0576180-mRNA-1:five_prime_utr;Parent=Msa0576180-mRNA-1
chr4_1 CDS 80259509 80259937 80259509 ID=Msa0576180-mRNA-1:cds;Parent=Msa0576180-mRNA-1
chr4_1 CDS 80260032 80260217 80260032 ID=Msa0576180-mRNA-1:cds;Parent=Msa0576180-mRNA-1
chr4_1 CDS 80260527 80260811 80260527 ID=Msa0576180-mRNA-1:cds;Parent=Msa0576180-mRNA-1
chr4_1 three_prime_UTR 80260812 80261347 80260812 ID=Msa0576180-mRNA-1:three_prime_utr;Parent=Msa0576180-mRNA-1
Gene Sequence

>Msa0576180

ATGCATACTAAGACAGACTCAGAGGTTACTAGCTTAGATGCATCATCCACAACAAGATCTCCTCGTCGACCAGCATACTATGTTCAAAGTCCATCCCATGATGGTGAAAAAACCACTACCTCCTTTCATTCTACTCCTGTTATCAGCCCAATGGGTTCTCCTCCTCATTCTCACTCTTCCTCTAGCCGTTTCTCTGGTTCCCGGAAACTCAACAACAACAACAACAACCACCGTAGTAACACCAAACCATGGAAGGAAATTGATGTAATTGAAGAAGAAGGTCTTCTTAACAATCAAGATCATCATCATTCTCTTTCTCGTCGTTGGTATTTCCTTGCTTTCATTCTTGGCTTTTTCCTTTTGTTCACTCTTTTCTCTCTTATCCTTTGGGGTGCTAGCAGACCCATGAAACCCCATGTCATGATTAAGAGTATAAAATTTGAGCATGTTAGAGTTCAAGCTGGTTCAGATGCAACCGGCGTGGCCACTGATATGATTACAGTGAATGCAACTGTGAAATTCACTTATCGTAACAAGGGCACATTTTTTGGTGTTCATGTCTCATCCACACCTTTAGATCTATCCTATTCAGAAATCGTAATTGGCACTGGCAATATGAAGAAGTTTTATCAATCAAGGAGGAGTCAAAGATTAGTGAGTGTGGCAGTGATGGGAAGCAAGATCCCATTGTATGGAAGTGGTGCTAGTCTTAGCAGCACAACTGGTATGCCAACTTTACCAGTGCCATTAAAATTGAGCTTTGAGATTAGATCTAGAGCTTATGTGCTTGGGAAATTGGTCAAACCAAAATACTACAAAAAGGTTCATTGTTCTGTCGTATTTGATCCCAAGAAAATCAATGTTTCTGTTTCCCTCAAGAAGTCTTGCACCTATGATTGA

Protein sequence

>Msa0576180

MHTKTDSEVTSLDASSTTRSPRRPAYYVQSPSHDGEKTTTSFHSTPVISPMGSPPHSHSSSSRFSGSRKLNNNNNNHRSNTKPWKEIDVIEEEGLLNNQDHHHSLSRRWYFLAFILGFFLLFTLFSLILWGASRPMKPHVMIKSIKFEHVRVQAGSDATGVATDMITVNATVKFTYRNKGTFFGVHVSSTPLDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGASLSSTTGMPTLPVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSVVFDPKKINVSVSLKKSCTYD*