Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642960 | XP_013455999.1 | 94.378 | 498 | 20 | 1 | 1 | 498 | 1 | 490 | 0.0 | 955 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642960 | sp|Q3EDG5|TPST_ARATH | 56.250 | 512 | 194 | 9 | 1 | 497 | 3 | 499 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0642960 | Msa0741440 | 0.818371 | 2.029653e-52 | -8.615850e-47 |
| Msa0642960 | Msa0822500 | 0.820330 | 7.262947e-53 | -8.615850e-47 |
| Msa0642960 | Msa1231840 | 0.802389 | 5.742879e-49 | -8.615850e-47 |
| Msa0642960 | Msa1346840 | 0.830642 | 2.617718e-55 | -8.615850e-47 |
| Msa0642960 | Msa1358500 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
| Msa0318680 | Msa0642960 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
| Msa0547120 | Msa0642960 | 0.945353 | 3.576278e-104 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642960 | MtrunA17_Chr4g0028941 | 95.134 | 411 | 12 | 1 | 1 | 411 | 1 | 403 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0642960 | AT1G08030.2 | 56.250 | 512 | 194 | 9 | 1 | 497 | 3 | 499 | 0.0 | 548 |
| Msa0642960 | AT1G08030.1 | 56.250 | 512 | 194 | 9 | 1 | 497 | 3 | 499 | 0.0 | 548 |
Find 131 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACATCAATTTGCGTTAT+AGG | 0.151679 | 4_3:-45299065 | None:intergenic |
| GAAATTGTATCCGAATTATT+TGG | 0.165247 | 4_3:+45294010 | Msa0642960:CDS |
| TCTTCACTTGATAGAGAAAT+TGG | 0.211342 | 4_3:+45293328 | Msa0642960:CDS |
| TTTATGTTGCTTATTGAAAA+TGG | 0.216862 | 4_3:-45298200 | None:intergenic |
| TAAGCGCGTCCTCCGGTTCT+AGG | 0.245466 | 4_3:-45293400 | None:intergenic |
| GGATTTCGTGTTTGTAACTA+TGG | 0.247909 | 4_3:+45293114 | Msa0642960:exon |
| AAACCTGTATTTCTAATTTA+CGG | 0.254363 | 4_3:+45297121 | Msa0642960:CDS |
| TTCGCGTTCCTCATTCTCTT+TGG | 0.261877 | 4_3:+45293154 | Msa0642960:CDS |
| GACAGAATTACGTTCAGATT+TGG | 0.276113 | 4_3:+45299013 | Msa0642960:three_prime_UTR |
| ACTTGTGTGGTCACAAGATT+TGG | 0.284053 | 4_3:-45299322 | None:intergenic |
| GGCTTTACGCTTGCGCTCTA+AGG | 0.304421 | 4_3:+45295046 | Msa0642960:CDS |
| AAATGAAAATTAAAGTAAAA+AGG | 0.309257 | 4_3:-45299131 | None:intergenic |
| TTCCTCATTCTCTTTGGATT+AGG | 0.332034 | 4_3:+45293160 | Msa0642960:CDS |
| ACCACAGACGTTCTCTCCTT+TGG | 0.337073 | 4_3:-45294915 | None:intergenic |
| GTACAGAAATATAAGGTTCT+TGG | 0.338238 | 4_3:+45296177 | Msa0642960:CDS |
| GAAGAACGTCGAAGGTAAAA+AGG | 0.340864 | 4_3:+45298928 | Msa0642960:CDS |
| ACCTGATGTTCACTGCTATC+AGG | 0.344360 | 4_3:-45296810 | None:intergenic |
| AGGAGATGCGTCGGCCTGAT+TGG | 0.351990 | 4_3:-45297149 | None:intergenic |
| GACCTACCTGTATTGAAATT+CGG | 0.355881 | 4_3:-45293014 | None:intergenic |
| TTGTTCAATCATCAGGTTGC+AGG | 0.356317 | 4_3:+45296105 | Msa0642960:CDS |
| ACCTACCTGTATTGAAATTC+GGG | 0.361606 | 4_3:-45293013 | None:intergenic |
| GAGGCTACTTCAACTGAAAA+TGG | 0.362347 | 4_3:+45296945 | Msa0642960:CDS |
| GAGTAAGCACATTGGATATC+TGG | 0.362596 | 4_3:+45295075 | Msa0642960:CDS |
| TGCAAATGTGGTTGGTTCTC+AGG | 0.362875 | 4_3:+45296409 | Msa0642960:CDS |
| CTCCTCTTTGAAGAGGATTC+CGG | 0.368588 | 4_3:+45297167 | Msa0642960:CDS |
| TTCTTGCATGTTCCTAGAAC+CGG | 0.375648 | 4_3:+45293388 | Msa0642960:CDS |
| TAGGAACGGTGATGGAAATA+TGG | 0.379871 | 4_3:-45299046 | None:intergenic |
| GCAAAATCTTTCATATCATA+AGG | 0.389952 | 4_3:-45295582 | None:intergenic |
| AGAGTGAATCAGCAGCATTT+TGG | 0.391134 | 4_3:+45299188 | Msa0642960:three_prime_UTR |
| CATTGATTTCAGATGACTGT+TGG | 0.394223 | 4_3:+45297078 | Msa0642960:intron |
| GTTAATCGGATCCCTAAGTA+TGG | 0.402475 | 4_3:-45294940 | None:intergenic |
| GCTCCGTAAATTAGAAATAC+AGG | 0.404958 | 4_3:-45297124 | None:intergenic |
| TAAATTTGTACAACAGTGTT+GGG | 0.405857 | 4_3:-45292978 | None:intergenic |
| AGCTGCTGGAGAACCTCTTC+GGG | 0.406385 | 4_3:-45298130 | None:intergenic |
| CGAGGACATTCCAAATAATT+CGG | 0.406698 | 4_3:-45294020 | None:intergenic |
| TGGTGGATTGTTCAATCATC+AGG | 0.413412 | 4_3:+45296098 | Msa0642960:CDS |
| GTACTAAAGACTCGGTTAAT+CGG | 0.413484 | 4_3:-45294954 | None:intergenic |
| CATCAATCATCCTGTGGCTT+GGG | 0.413830 | 4_3:+45295623 | Msa0642960:CDS |
| TAGCTGCTGGAGAACCTCTT+CGG | 0.416269 | 4_3:-45298131 | None:intergenic |
| ATGCTGCTGATTCACTCTAA+TGG | 0.428807 | 4_3:-45299183 | None:intergenic |
| ATAGTATCTAGGCTGGTGTT+TGG | 0.429323 | 4_3:-45296452 | None:intergenic |
| GAGGGAAGCTAGGTATAGTA+AGG | 0.432307 | 4_3:+45295533 | Msa0642960:intron |
| GGAGATGCGTCGGCCTGATT+GGG | 0.432707 | 4_3:-45297148 | None:intergenic |
| TGTGTTGCAGATGTCAAGTT+TGG | 0.434227 | 4_3:-45295020 | None:intergenic |
| ATAATAAAGAAAATCTTTCC+CGG | 0.435306 | 4_3:-45292891 | None:intergenic |
| TCCTGATAGCAGTGAACATC+AGG | 0.444438 | 4_3:+45296809 | Msa0642960:CDS |
| AGTAGTTAGGTCATAATTTG+TGG | 0.444790 | 4_3:+45298954 | Msa0642960:three_prime_UTR |
| GCTTGGGATATTGTACATAA+TGG | 0.445241 | 4_3:+45295639 | Msa0642960:CDS |
| CGCTTGCGCTCTAAGGCTAA+AGG | 0.446556 | 4_3:+45295053 | Msa0642960:CDS |
| AATTAAATTGCAGGAGAGAT+GGG | 0.449923 | 4_3:+45298797 | Msa0642960:intron |
| TAAGACATACCCTAGCAAAT+AGG | 0.455359 | 4_3:-45295133 | None:intergenic |
| CTAGATACTATTGAAAATAC+AGG | 0.455547 | 4_3:+45296464 | Msa0642960:CDS |
| ATTGATTTCAGATGACTGTT+GGG | 0.457181 | 4_3:+45297079 | Msa0642960:intron |
| CGTTAAGAGACCGTAGCTGC+TGG | 0.457921 | 4_3:-45298144 | None:intergenic |
| AGAAGATAAACATATCCTTA+AGG | 0.461785 | 4_3:+45293354 | Msa0642960:CDS |
| ACATCAATCATCCTGTGGCT+TGG | 0.470813 | 4_3:+45295622 | Msa0642960:CDS |
| ACCTCCTTTGTAAAGTTCAC+CGG | 0.471243 | 4_3:-45297186 | None:intergenic |
| ACATAATGGAGCCACATTCC+AGG | 0.475210 | 4_3:+45295653 | Msa0642960:CDS |
| TGCAACAATGTTTGCAAATG+TGG | 0.475585 | 4_3:+45296397 | Msa0642960:CDS |
| AATTTACGGAGCTCCCAATC+AGG | 0.480734 | 4_3:+45297135 | Msa0642960:CDS |
| ATCTTGCAGAAGAGACTTGA+CGG | 0.481969 | 4_3:+45296335 | Msa0642960:intron |
| TCATTGTGTACAGAAATATA+AGG | 0.483519 | 4_3:+45296170 | Msa0642960:CDS |
| AAATTAAATTGCAGGAGAGA+TGG | 0.487278 | 4_3:+45298796 | Msa0642960:intron |
| GTAAATTTGTACAACAGTGT+TGG | 0.489296 | 4_3:-45292979 | None:intergenic |
| AAGGGAATGAATATTGTTGA+GGG | 0.497432 | 4_3:+45295552 | Msa0642960:CDS |
| GTCTGTGGTTACCATACTTA+GGG | 0.499330 | 4_3:+45294929 | Msa0642960:CDS |
| TACAGAATAGCACCTCGGAC+AGG | 0.502163 | 4_3:+45296913 | Msa0642960:intron |
| GCACATTGGATATCTGGCCT+TGG | 0.504280 | 4_3:+45295081 | Msa0642960:CDS |
| ATGAAAATAAGCGCGTCCTC+CGG | 0.506987 | 4_3:-45293407 | None:intergenic |
| CTCGGACAGGGGAGCAAGCG+AGG | 0.507493 | 4_3:+45296926 | Msa0642960:CDS |
| CGTCTGTGGTTACCATACTT+AGG | 0.507713 | 4_3:+45294928 | Msa0642960:CDS |
| TTTGTACGAATAAGAAAAGA+AGG | 0.509561 | 4_3:-45298890 | None:intergenic |
| ATTGAAATGAAACGCTTGAA+AGG | 0.509620 | 4_3:-45292835 | None:intergenic |
| TTAATTTACAGAGGGAAGCT+AGG | 0.513808 | 4_3:+45295523 | Msa0642960:intron |
| ATAAAATGAGAATATACAAA+TGG | 0.517101 | 4_3:+45299245 | Msa0642960:three_prime_UTR |
| TGAGAGAGTTGTGAAGAGTT+GGG | 0.520453 | 4_3:+45293300 | Msa0642960:CDS |
| TTGCGTTATAGGAACGGTGA+TGG | 0.525796 | 4_3:-45299054 | None:intergenic |
| ACAACAGTGTTGGGATTCGA+TGG | 0.526663 | 4_3:-45292969 | None:intergenic |
| GTGAGAGAGTTGTGAAGAGT+TGG | 0.527357 | 4_3:+45293299 | Msa0642960:CDS |
| TGATTGATGTATTCTTGTAA+AGG | 0.530928 | 4_3:-45295609 | None:intergenic |
| ATCAATTTGCGTTATAGGAA+CGG | 0.533011 | 4_3:-45299060 | None:intergenic |
| GTCTCTTAACGATCTTGACT+TGG | 0.536514 | 4_3:+45298156 | Msa0642960:CDS |
| TGAGAGAAGACCTATTTGCT+AGG | 0.541229 | 4_3:+45295123 | Msa0642960:CDS |
| AATAGGTCTTCTCTCATCCA+TGG | 0.546951 | 4_3:-45295116 | None:intergenic |
| TACCTAATCCAAAGAGAATG+AGG | 0.547462 | 4_3:-45293162 | None:intergenic |
| CTTGGAAGTATCTTGTTCCA+TGG | 0.549166 | 4_3:+45295099 | Msa0642960:CDS |
| AAGAGGTTCTCCAGCAGCTA+CGG | 0.550011 | 4_3:+45298134 | Msa0642960:CDS |
| ATAAGTTGCGATTTGATCCA+AGG | 0.550266 | 4_3:+45294051 | Msa0642960:CDS |
| CTTGACGGTATGTTATATGT+TGG | 0.550944 | 4_3:+45296350 | Msa0642960:CDS |
| TAAGGGAATGAATATTGTTG+AGG | 0.552643 | 4_3:+45295551 | Msa0642960:CDS |
| ACAGAATAGCACCTCGGACA+GGG | 0.556247 | 4_3:+45296914 | Msa0642960:intron |
| CTCGCTTGCTCCCCTGTCCG+AGG | 0.558655 | 4_3:-45296925 | None:intergenic |
| GAGATCCCGAATTTCAATAC+AGG | 0.561270 | 4_3:+45293008 | Msa0642960:five_prime_UTR |
| TAACGCAATGAAGTTGAAGA+AGG | 0.563781 | 4_3:-45292862 | None:intergenic |
| CTTGACATCTGCAACACAGA+TGG | 0.565350 | 4_3:+45295025 | Msa0642960:CDS |
| GACGCATCTCCTCTTTGAAG+AGG | 0.567353 | 4_3:+45297160 | Msa0642960:CDS |
| TAATAAAGAAAATCTTTCCC+GGG | 0.568591 | 4_3:-45292890 | None:intergenic |
| ACAATGTTTGCAAATGTGGT+TGG | 0.574812 | 4_3:+45296401 | Msa0642960:CDS |
| GATGACTGTTGGGAAACTCA+TGG | 0.582509 | 4_3:+45297089 | Msa0642960:intron |
| CAGAATAGCACCTCGGACAG+GGG | 0.587219 | 4_3:+45296915 | Msa0642960:intron |
| ATATGTGCTACAAGTTGCAA+AGG | 0.593967 | 4_3:+45296203 | Msa0642960:CDS |
| TGCAAGAAGAAGAACGTCGA+AGG | 0.596502 | 4_3:+45298920 | Msa0642960:CDS |
| AACAAAGGGTTCTGGAATCG+CGG | 0.596714 | 4_3:+45292938 | Msa0642960:five_prime_UTR |
| GAGAGAAGACCTATTTGCTA+GGG | 0.597997 | 4_3:+45295124 | Msa0642960:CDS |
| TTGTTGAAAATGGTTAAGAG+TGG | 0.598004 | 4_3:-45292786 | None:intergenic |
| TCCGGTGAACTTTACAAAGG+AGG | 0.598156 | 4_3:+45297185 | Msa0642960:CDS |
| ATATATGTAATGAAGTATGG+TGG | 0.610442 | 4_3:+45296081 | Msa0642960:intron |
| CACCGGAATCCTCTTCAAAG+AGG | 0.618564 | 4_3:-45297169 | None:intergenic |
| CATGACATCTAAATTTCCAA+AGG | 0.618722 | 4_3:+45294899 | Msa0642960:CDS |
| CACAAAACCCTACCCATCAG+TGG | 0.618918 | 4_3:-45299100 | None:intergenic |
| TCCAAAGGAGAGAACGTCTG+TGG | 0.619125 | 4_3:+45294914 | Msa0642960:CDS |
| ATATGTCATCATCCTGTGGA+AGG | 0.619171 | 4_3:+45298839 | Msa0642960:CDS |
| AGGGAAGCTAGGTATAGTAA+GGG | 0.619399 | 4_3:+45295534 | Msa0642960:CDS |
| ACGACTTCAAGTTCCCGAAG+AGG | 0.619922 | 4_3:+45298117 | Msa0642960:CDS |
| CTAATGTAAGAACCTTCCAC+AGG | 0.624624 | 4_3:-45298851 | None:intergenic |
| TGTACAATATCCCAAGCCAC+AGG | 0.629300 | 4_3:-45295633 | None:intergenic |
| CATGGAACAAGATACTTCCA+AGG | 0.631377 | 4_3:-45295098 | None:intergenic |
| ATTCGTAAGTACTAAAGACT+CGG | 0.636215 | 4_3:-45294962 | None:intergenic |
| GGCTAAAGGAGTAAGCACAT+TGG | 0.636429 | 4_3:+45295067 | Msa0642960:CDS |
| ATGAATATGTCATCATCCTG+TGG | 0.640198 | 4_3:+45298835 | Msa0642960:CDS |
| CAACAGTGTTGGGATTCGAT+GGG | 0.641202 | 4_3:-45292968 | None:intergenic |
| GTTATATGTTGGTCTTACTG+AGG | 0.642498 | 4_3:+45296361 | Msa0642960:CDS |
| TTGCATGTTCCTAGAACCGG+AGG | 0.645553 | 4_3:+45293391 | Msa0642960:CDS |
| TCTTCAAAGAGGAGATGCGT+CGG | 0.647818 | 4_3:-45297158 | None:intergenic |
| CGCAACTTATCATAAGATCG+AGG | 0.653437 | 4_3:-45294038 | None:intergenic |
| TACCTCAGTGATCAGCGATG+AGG | 0.654015 | 4_3:-45298224 | None:intergenic |
| GTGCTGAAGTACCTGGAATG+TGG | 0.658715 | 4_3:-45295664 | None:intergenic |
| GATTCCGGTGAACTTTACAA+AGG | 0.673848 | 4_3:+45297182 | Msa0642960:CDS |
| AGAATACATCAATCATCCTG+TGG | 0.692934 | 4_3:+45295617 | Msa0642960:CDS |
| TGCAATACAGAATAGCACCT+CGG | 0.695717 | 4_3:+45296908 | Msa0642960:intron |
| AACCTCATCGCTGATCACTG+AGG | 0.754324 | 4_3:+45298222 | Msa0642960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATCCAAAAAAAAAAAA+AGG | - | chr4_3:45295890-45295909 | None:intergenic | 10.0% |
| !!! | TACTTTTCTATTTTAAATTA+CGG | - | chr4_3:45297546-45297565 | None:intergenic | 10.0% |
| !! | TTTAAAAATTCAATAAGATA+TGG | - | chr4_3:45298546-45298565 | None:intergenic | 10.0% |
| !!! | AAACTTGATATTTTTTATTA+TGG | + | chr4_3:45298564-45298583 | Msa0642960:intron | 10.0% |
| !! | AAATGAAAATTAAAGTAAAA+AGG | - | chr4_3:45299134-45299153 | None:intergenic | 10.0% |
| !!! | ATTGGTAAGTTTTTTTATTT+GGG | + | chr4_3:45293428-45293447 | Msa0642960:intron | 15.0% |
| !! | TATTAATCAAATTCATTAAC+CGG | + | chr4_3:45293466-45293485 | Msa0642960:intron | 15.0% |
| !! | AAAAAAAATTGCAACAAAAA+GGG | - | chr4_3:45294114-45294133 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTGCAACAAAA+AGG | - | chr4_3:45294115-45294134 | None:intergenic | 15.0% |
| !! | TTAATCTTCATATAAGAATT+GGG | - | chr4_3:45295278-45295297 | None:intergenic | 15.0% |
| !! | ATTAATCTTCATATAAGAAT+TGG | - | chr4_3:45295279-45295298 | None:intergenic | 15.0% |
| !!! | AACATATTTTAAAAGTATGA+AGG | - | chr4_3:45295461-45295480 | None:intergenic | 15.0% |
| !! | AAAAAAAAGGATGATATTAA+TGG | - | chr4_3:45295877-45295896 | None:intergenic | 15.0% |
| !!! | TATCATCCTTTTTTTTTTTT+TGG | + | chr4_3:45295881-45295900 | Msa0642960:intron | 15.0% |
| !!! | TGTAATATTTTCAGAATATA+TGG | + | chr4_3:45296622-45296641 | Msa0642960:intron | 15.0% |
| !!! | GTAATATTTTCAGAATATAT+GGG | + | chr4_3:45296623-45296642 | Msa0642960:intron | 15.0% |
| !!! | AATATGGTGATTTTATTTTA+TGG | + | chr4_3:45297007-45297026 | Msa0642960:intron | 15.0% |
| !!! | TACTTTTCTTTTCTAAATTA+CGG | + | chr4_3:45297410-45297429 | Msa0642960:intron | 15.0% |
| !! | AATCACAAAATATTTAGAAA+GGG | - | chr4_3:45298089-45298108 | None:intergenic | 15.0% |
| !! | AAATCACAAAATATTTAGAA+AGG | - | chr4_3:45298090-45298109 | None:intergenic | 15.0% |
| !! | AAACGGATAAAAAAAAAATA+TGG | + | chr4_3:45298352-45298371 | Msa0642960:intron | 15.0% |
| !! | ATAAAAAAAAAATATGGTCA+CGG | + | chr4_3:45298358-45298377 | Msa0642960:intron | 15.0% |
| !! | CAAATTACAAAATAACAAAT+TGG | + | chr4_3:45298436-45298455 | Msa0642960:intron | 15.0% |
| !!! | AATTTAATTTAACACAGTAA+AGG | - | chr4_3:45298786-45298805 | None:intergenic | 15.0% |
| !!! | ACTTTAATTTTCATTTTTGT+TGG | + | chr4_3:45299138-45299157 | Msa0642960:three_prime_UTR | 15.0% |
| !!! | TATTCTCATTTTATAAACTT+TGG | - | chr4_3:45299239-45299258 | None:intergenic | 15.0% |
| !! | ATAAAATGAGAATATACAAA+TGG | + | chr4_3:45299245-45299264 | Msa0642960:three_prime_UTR | 15.0% |
| !!! | TTTTGAAATTGAAATGAAAG+AGG | - | chr4_3:45292815-45292834 | None:intergenic | 20.0% |
| !! | ATAATAAAGAAAATCTTTCC+CGG | - | chr4_3:45292894-45292913 | None:intergenic | 20.0% |
| !! | AAAACAAAACAGAAAAACAA+AGG | + | chr4_3:45292923-45292942 | Msa0642960:five_prime_UTR | 20.0% |
| !! | AAACAAAACAGAAAAACAAA+GGG | + | chr4_3:45292924-45292943 | Msa0642960:five_prime_UTR | 20.0% |
| !!! | TTGTTTTGTTTTGTTGTTTT+TGG | + | chr4_3:45293214-45293233 | Msa0642960:intron | 20.0% |
| !!! | CATTGGTAAGTTTTTTTATT+TGG | + | chr4_3:45293427-45293446 | Msa0642960:intron | 20.0% |
| !! | ATTAATCAAATTCATTAACC+GGG | + | chr4_3:45293467-45293486 | Msa0642960:intron | 20.0% |
| !! | TTGATAGAATTGATATAGAT+TGG | + | chr4_3:45293603-45293622 | Msa0642960:intron | 20.0% |
| !!! | AATTGATATAGATTGGATTT+TGG | + | chr4_3:45293610-45293629 | Msa0642960:intron | 20.0% |
| !!! | GAATTATTTTTGTTTGAACA+TGG | - | chr4_3:45293938-45293957 | None:intergenic | 20.0% |
| !!! | AAATAACATAAAAGCATTTG+TGG | - | chr4_3:45294501-45294520 | None:intergenic | 20.0% |
| !!! | TTTCACAGTAGATTTTTAAA+TGG | - | chr4_3:45294785-45294804 | None:intergenic | 20.0% |
| !!! | TGCTTTTTTTGATATGTTTA+TGG | + | chr4_3:45295312-45295331 | Msa0642960:intron | 20.0% |
| !!! | ATATAGACTTTAATTTACAG+AGG | + | chr4_3:45295514-45295533 | Msa0642960:intron | 20.0% |
| !!! | TATAGACTTTAATTTACAGA+GGG | + | chr4_3:45295515-45295534 | Msa0642960:intron | 20.0% |
| !! | TAATATTCAAATGATAGCTA+TGG | - | chr4_3:45295943-45295962 | None:intergenic | 20.0% |
| !!! | TTGTATTTTCAGAGTTTTTT+TGG | + | chr4_3:45296046-45296065 | Msa0642960:intron | 20.0% |
| !! | TTGATATATGTAATGAAGTA+TGG | + | chr4_3:45296078-45296097 | Msa0642960:intron | 20.0% |
| !!! | AAACCTGTATTTCTAATTTA+CGG | + | chr4_3:45297121-45297140 | Msa0642960:CDS | 20.0% |
| !!! | TAATGATAGTGAAAGAATTA+TGG | - | chr4_3:45297247-45297266 | None:intergenic | 20.0% |
| !! | TTAGTAATACAAAAGTTATC+AGG | - | chr4_3:45297648-45297667 | None:intergenic | 20.0% |
| !! | TATTACTAAACTTATTTCAC+AGG | + | chr4_3:45297659-45297678 | Msa0642960:intron | 20.0% |
| !!! | ATAGAATGTTTTTTTCAACA+CGG | - | chr4_3:45297770-45297789 | None:intergenic | 20.0% |
| !!! | TATTACATATCCTTTTTTAC+TGG | + | chr4_3:45297837-45297856 | Msa0642960:intron | 20.0% |
| !! | TATACATATTGGAATATTGA+TGG | + | chr4_3:45297905-45297924 | Msa0642960:intron | 20.0% |
| !!! | TTTATGTTGCTTATTGAAAA+TGG | - | chr4_3:45298203-45298222 | None:intergenic | 20.0% |
| !!! | TTGGTAGTCTAAATTTTAAA+CGG | + | chr4_3:45298325-45298344 | Msa0642960:intron | 20.0% |
| !!! | AAATTTTAAACGGCTTAAAA+CGG | + | chr4_3:45298335-45298354 | Msa0642960:intron | 20.0% |
| !! | AAAGAGGTTTTTGTTGAAAA+TGG | - | chr4_3:45292799-45292818 | None:intergenic | 25.0% |
| ! | TAATAAAGAAAATCTTTCCC+GGG | - | chr4_3:45292893-45292912 | None:intergenic | 25.0% |
| ! | TAAATTTGTACAACAGTGTT+GGG | - | chr4_3:45292981-45293000 | None:intergenic | 25.0% |
| ! | AGAAGATAAACATATCCTTA+AGG | + | chr4_3:45293354-45293373 | Msa0642960:CDS | 25.0% |
| ! | AGAAAAACAACAAATCCTTA+AGG | - | chr4_3:45293372-45293391 | None:intergenic | 25.0% |
| !! | ACTAAGTCTATTAAGTTTTG+TGG | + | chr4_3:45293863-45293882 | Msa0642960:intron | 25.0% |
| ! | GAAATTGTATCCGAATTATT+TGG | + | chr4_3:45294010-45294029 | Msa0642960:CDS | 25.0% |
| ! | GACAACATAACAAATGTTAA+AGG | - | chr4_3:45294349-45294368 | None:intergenic | 25.0% |
| ! | AAAGCGTAAAAACTTGTATT+AGG | + | chr4_3:45294572-45294591 | Msa0642960:intron | 25.0% |
| !!! | TTCAATAATGGACTAATAGA+AGG | - | chr4_3:45294751-45294770 | None:intergenic | 25.0% |
| ! | GAGAAATGACATTTCAATAA+TGG | - | chr4_3:45294763-45294782 | None:intergenic | 25.0% |
| ! | GGAAAATAAGCAATATATGA+TGG | - | chr4_3:45294809-45294828 | None:intergenic | 25.0% |
| !! | TTAACAGTCTACATTTTTGT+TGG | - | chr4_3:45294860-45294879 | None:intergenic | 25.0% |
| !! | TAGTACTTACGAATTTTCAA+TGG | + | chr4_3:45294971-45294990 | Msa0642960:CDS | 25.0% |
| ! | AATGCTTCTAAATTCATACA+AGG | + | chr4_3:45295199-45295218 | Msa0642960:intron | 25.0% |
| ! | AATTCATACAAGGTTGTAAA+AGG | + | chr4_3:45295209-45295228 | Msa0642960:intron | 25.0% |
| ! | TATCATAAACAAGACATGAA+TGG | - | chr4_3:45295367-45295386 | None:intergenic | 25.0% |
| ! | ATGTACATCAAATGGAAATA+TGG | - | chr4_3:45295487-45295506 | None:intergenic | 25.0% |
| ! | GCAAAATCTTTCATATCATA+AGG | - | chr4_3:45295585-45295604 | None:intergenic | 25.0% |
| ! | TGATTGATGTATTCTTGTAA+AGG | - | chr4_3:45295612-45295631 | None:intergenic | 25.0% |
| ! | AGAAAACAGTTAAACATTGA+TGG | - | chr4_3:45295749-45295768 | None:intergenic | 25.0% |
| !!! | AAAATGCATCCATATTTTTG+AGG | - | chr4_3:45295839-45295858 | None:intergenic | 25.0% |
| ! | ATATTACTTTGCAAGAAAGA+TGG | + | chr4_3:45295957-45295976 | Msa0642960:intron | 25.0% |
| ! | ATAAACAACTAGAACAAACA+CGG | - | chr4_3:45295983-45296002 | None:intergenic | 25.0% |
| !!! | TAAGTTTTTCGATTGCAATT+GGG | - | chr4_3:45296022-45296041 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTTCGATTGCAAT+TGG | - | chr4_3:45296023-45296042 | None:intergenic | 25.0% |
| ! | ATATATGTAATGAAGTATGG+TGG | + | chr4_3:45296081-45296100 | Msa0642960:intron | 25.0% |
| ! | TCATTGTGTACAGAAATATA+AGG | + | chr4_3:45296170-45296189 | Msa0642960:CDS | 25.0% |
| ! | TACAAGTACATACCTTAAAA+AGG | - | chr4_3:45296314-45296333 | None:intergenic | 25.0% |
| !! | CTGTATTTTCAATAGTATCT+AGG | - | chr4_3:45296466-45296485 | None:intergenic | 25.0% |
| ! | CTAGATACTATTGAAAATAC+AGG | + | chr4_3:45296464-45296483 | Msa0642960:CDS | 25.0% |
| !!! | TTTTTTCTCAAGTTAGAAGA+AGG | + | chr4_3:45296524-45296543 | Msa0642960:intron | 25.0% |
| !! | TTTTTCTCAAGTTAGAAGAA+GGG | + | chr4_3:45296525-45296544 | Msa0642960:intron | 25.0% |
| !! | ATATTTTCAGAATATATGGG+TGG | + | chr4_3:45296626-45296645 | Msa0642960:intron | 25.0% |
| !! | TATTTTCAGAATATATGGGT+GGG | + | chr4_3:45296627-45296646 | Msa0642960:intron | 25.0% |
| !!! | TCATGTTTTGAAATGATCTT+TGG | + | chr4_3:45296671-45296690 | Msa0642960:intron | 25.0% |
| !!! | CATGTTTTGAAATGATCTTT+GGG | + | chr4_3:45296672-45296691 | Msa0642960:intron | 25.0% |
| !! | TTGTTATTGAGGTTTGAATA+TGG | + | chr4_3:45296860-45296879 | Msa0642960:intron | 25.0% |
| ! | AATGAGAAATGGATAATATC+TGG | - | chr4_3:45297038-45297057 | None:intergenic | 25.0% |
| ! | TAAGCTGATAAAATGAGAAA+TGG | - | chr4_3:45297049-45297068 | None:intergenic | 25.0% |
| !! | TTTCTCATTTTATCAGCTTA+CGG | + | chr4_3:45297049-45297068 | Msa0642960:intron | 25.0% |
| ! | ATTCTTTCACTATCATTATG+TGG | + | chr4_3:45297249-45297268 | Msa0642960:intron | 25.0% |
| ! | TGTATACATTTATTACTGCT+TGG | + | chr4_3:45297308-45297327 | Msa0642960:intron | 25.0% |
| ! | GTATACATTTATTACTGCTT+GGG | + | chr4_3:45297309-45297328 | Msa0642960:intron | 25.0% |
| ! | AAATTACGGACACTATAAAA+TGG | + | chr4_3:45297424-45297443 | Msa0642960:intron | 25.0% |
| ! | TCAACTTGAACAATTTAACA+TGG | + | chr4_3:45297690-45297709 | Msa0642960:intron | 25.0% |
| ! | CAAATTGCATCTATACATAT+TGG | + | chr4_3:45297894-45297913 | Msa0642960:intron | 25.0% |
| ! | ATTCTTTCTTTGCACAAAAA+TGG | + | chr4_3:45298266-45298285 | Msa0642960:intron | 25.0% |
| ! | GATATAGATAATCTTATCCA+TGG | + | chr4_3:45298292-45298311 | Msa0642960:intron | 25.0% |
| ! | ACTGTGTTAAATTAAATTGC+AGG | + | chr4_3:45298788-45298807 | Msa0642960:intron | 25.0% |
| ! | TTTGTACGAATAAGAAAAGA+AGG | - | chr4_3:45298893-45298912 | None:intergenic | 25.0% |
| !!! | AATTTTCATTTTTGTTGGAC+AGG | + | chr4_3:45299143-45299162 | Msa0642960:three_prime_UTR | 25.0% |
| TTGTTGAAAATGGTTAAGAG+TGG | - | chr4_3:45292789-45292808 | None:intergenic | 30.0% | |
| ATTGAAATGAAACGCTTGAA+AGG | - | chr4_3:45292838-45292857 | None:intergenic | 30.0% | |
| GTAAATTTGTACAACAGTGT+TGG | - | chr4_3:45292982-45293001 | None:intergenic | 30.0% | |
| TCTTCACTTGATAGAGAAAT+TGG | + | chr4_3:45293328-45293347 | Msa0642960:CDS | 30.0% | |
| ! | GGTTAAAAGTGATTTGTGTT+TGG | + | chr4_3:45293631-45293650 | Msa0642960:intron | 30.0% |
| !! | AAGCTATGATTTGTAGCTTT+TGG | - | chr4_3:45293716-45293735 | None:intergenic | 30.0% |
| ! | AGAATTGATTCTGACATGTT+TGG | - | chr4_3:45293794-45293813 | None:intergenic | 30.0% |
| TAATAGACTTAGTGCATGTT+TGG | - | chr4_3:45293856-45293875 | None:intergenic | 30.0% | |
| AATGACATGTTTGTTTGATG+CGG | + | chr4_3:45293958-45293977 | Msa0642960:intron | 30.0% | |
| !!! | GTTTTTTATGCAGCTTTTTG+AGG | + | chr4_3:45293988-45294007 | Msa0642960:intron | 30.0% |
| ! | ATGATCTTGCATGATTGTTT+TGG | + | chr4_3:45294138-45294157 | Msa0642960:intron | 30.0% |
| !! | TTGTCTGATGTTTACTTTTC+TGG | + | chr4_3:45294364-45294383 | Msa0642960:intron | 30.0% |
| !! | TGTCTGATGTTTACTTTTCT+GGG | + | chr4_3:45294365-45294384 | Msa0642960:intron | 30.0% |
| ATTTGTACCCAACAAACTAA+TGG | + | chr4_3:45294517-45294536 | Msa0642960:intron | 30.0% | |
| ! | TTGTCGTTTCTGAAAATTCA+CGG | - | chr4_3:45294668-45294687 | None:intergenic | 30.0% |
| !! | TAATGGACTAATAGAAGGTT+TGG | - | chr4_3:45294746-45294765 | None:intergenic | 30.0% |
| CACATGTAAACAACAGAAAA+TGG | - | chr4_3:45294830-45294849 | None:intergenic | 30.0% | |
| CATGACATCTAAATTTCCAA+AGG | + | chr4_3:45294899-45294918 | Msa0642960:CDS | 30.0% | |
| ATTCGTAAGTACTAAAGACT+CGG | - | chr4_3:45294965-45294984 | None:intergenic | 30.0% | |
| ! | TACTTACGAATTTTCAATGG+AGG | + | chr4_3:45294974-45294993 | Msa0642960:CDS | 30.0% |
| ! | TTTTAGCATTACCACATGAT+GGG | + | chr4_3:45295422-45295441 | Msa0642960:intron | 30.0% |
| TCAATCACATGTACATCAAA+TGG | - | chr4_3:45295495-45295514 | None:intergenic | 30.0% | |
| TAAGGGAATGAATATTGTTG+AGG | + | chr4_3:45295551-45295570 | Msa0642960:CDS | 30.0% | |
| AAGGGAATGAATATTGTTGA+GGG | + | chr4_3:45295552-45295571 | Msa0642960:CDS | 30.0% | |
| !!! | CATATTTTTGAGGCGATAAT+CGG | - | chr4_3:45295829-45295848 | None:intergenic | 30.0% |
| CAAATGATAGCTATGGAATT+TGG | - | chr4_3:45295936-45295955 | None:intergenic | 30.0% | |
| !!! | AATTGGGGATTTTAATTTGC+AGG | - | chr4_3:45296006-45296025 | None:intergenic | 30.0% |
| !! | AAGTTTTTCGATTGCAATTG+GGG | - | chr4_3:45296021-45296040 | None:intergenic | 30.0% |
| GTACAGAAATATAAGGTTCT+TGG | + | chr4_3:45296177-45296196 | Msa0642960:CDS | 30.0% | |
| GTTTAAATAGTTGCATCTCA+TGG | + | chr4_3:45296236-45296255 | Msa0642960:intron | 30.0% | |
| ACATACCTTAAAAAGGATTG+AGG | - | chr4_3:45296307-45296326 | None:intergenic | 30.0% | |
| ! | ATTTTCAATAGTATCTAGGC+TGG | - | chr4_3:45296462-45296481 | None:intergenic | 30.0% |
| ATTGAAAATACAGGTTAGTG+TGG | + | chr4_3:45296473-45296492 | Msa0642960:intron | 30.0% | |
| TCTGAAAATATTACATGTCC+AGG | - | chr4_3:45296617-45296636 | None:intergenic | 30.0% | |
| TAAAATCACCATATTTGCCA+AGG | - | chr4_3:45297002-45297021 | None:intergenic | 30.0% | |
| ! | ATTGATTTCAGATGACTGTT+GGG | + | chr4_3:45297079-45297098 | Msa0642960:intron | 30.0% |
| CAAAAAGAATGAGTGAAGAA+AGG | - | chr4_3:45297288-45297307 | None:intergenic | 30.0% | |
| !! | CCTCTATTTCAAGTTACTTA+GGG | + | chr4_3:45297352-45297371 | Msa0642960:intron | 30.0% |
| AATTCGAAACCGAAGATTAA+GGG | - | chr4_3:45297613-45297632 | None:intergenic | 30.0% | |
| AAATTCGAAACCGAAGATTA+AGG | - | chr4_3:45297614-45297633 | None:intergenic | 30.0% | |
| !!! | ATCCTTTTTTACTGGCTTTT+CGG | + | chr4_3:45297845-45297864 | Msa0642960:intron | 30.0% |
| TGTTACTACTTGATAAGTGT+TGG | + | chr4_3:45298022-45298041 | Msa0642960:intron | 30.0% | |
| GTTACTACTTGATAAGTGTT+GGG | + | chr4_3:45298023-45298042 | Msa0642960:intron | 30.0% | |
| CATAAGTACAAGTTAAGAGA+AGG | - | chr4_3:45298060-45298079 | None:intergenic | 30.0% | |
| AAATAACAAATTGGTGCAGA+AGG | + | chr4_3:45298445-45298464 | Msa0642960:intron | 30.0% | |
| AGGTATAGTCAATATACTCA+TGG | + | chr4_3:45298465-45298484 | Msa0642960:intron | 30.0% | |
| GGTATAGTCAATATACTCAT+GGG | + | chr4_3:45298466-45298485 | Msa0642960:intron | 30.0% | |
| GTATAGTCAATATACTCATG+GGG | + | chr4_3:45298467-45298486 | Msa0642960:intron | 30.0% | |
| TATAGTCAATATACTCATGG+GGG | + | chr4_3:45298468-45298487 | Msa0642960:intron | 30.0% | |
| ! | GATCTAAATGTTACCGTTTT+TGG | - | chr4_3:45298695-45298714 | None:intergenic | 30.0% |
| AAATTAAATTGCAGGAGAGA+TGG | + | chr4_3:45298796-45298815 | Msa0642960:intron | 30.0% | |
| AATTAAATTGCAGGAGAGAT+GGG | + | chr4_3:45298797-45298816 | Msa0642960:intron | 30.0% | |
| GGTAAAAAGGTAAAGTAGTT+AGG | + | chr4_3:45298941-45298960 | Msa0642960:exon | 30.0% | |
| AGTAGTTAGGTCATAATTTG+TGG | + | chr4_3:45298954-45298973 | Msa0642960:three_prime_UTR | 30.0% | |
| ATCAATTTGCGTTATAGGAA+CGG | - | chr4_3:45299063-45299082 | None:intergenic | 30.0% | |
| ACAACATCAATTTGCGTTAT+AGG | - | chr4_3:45299068-45299087 | None:intergenic | 30.0% | |
| TAACGCAATGAAGTTGAAGA+AGG | - | chr4_3:45292865-45292884 | None:intergenic | 35.0% | |
| ! | CTTCATTGCGTTAATTTTCC+CGG | + | chr4_3:45292872-45292891 | Msa0642960:five_prime_UTR | 35.0% |
| ! | TTCATTGCGTTAATTTTCCC+GGG | + | chr4_3:45292873-45292892 | Msa0642960:five_prime_UTR | 35.0% |
| AACAGAAAAACAAAGGGTTC+TGG | + | chr4_3:45292930-45292949 | Msa0642960:five_prime_UTR | 35.0% | |
| ACCTACCTGTATTGAAATTC+GGG | - | chr4_3:45293016-45293035 | None:intergenic | 35.0% | |
| GACCTACCTGTATTGAAATT+CGG | - | chr4_3:45293017-45293036 | None:intergenic | 35.0% | |
| AAAACCAGAATGAAGAGAGT+GGG | - | chr4_3:45293039-45293058 | None:intergenic | 35.0% | |
| ! | ACTCACGCTTTCTTTTTGTT+AGG | + | chr4_3:45293092-45293111 | Msa0642960:intron | 35.0% |
| ! | CTCACGCTTTCTTTTTGTTA+GGG | + | chr4_3:45293093-45293112 | Msa0642960:intron | 35.0% |
| GGATTTCGTGTTTGTAACTA+TGG | + | chr4_3:45293114-45293133 | Msa0642960:exon | 35.0% | |
| TTCCTCATTCTCTTTGGATT+AGG | + | chr4_3:45293160-45293179 | Msa0642960:CDS | 35.0% | |
| TACCTAATCCAAAGAGAATG+AGG | - | chr4_3:45293165-45293184 | None:intergenic | 35.0% | |
| !!! | GATAGTGAATGCTTGTTTTG+CGG | + | chr4_3:45293258-45293277 | Msa0642960:intron | 35.0% |
| !!! | AATGCTTGTTTTGCGGAAAA+TGG | + | chr4_3:45293265-45293284 | Msa0642960:CDS | 35.0% |
| ! | TGTTTTGCGGAAAATGGTTT+TGG | + | chr4_3:45293271-45293290 | Msa0642960:CDS | 35.0% |
| ! | TTCAGCTTAATCAGAGGTTT+TGG | + | chr4_3:45293526-45293545 | Msa0642960:intron | 35.0% |
| ! | TCAGCTTAATCAGAGGTTTT+GGG | + | chr4_3:45293527-45293546 | Msa0642960:intron | 35.0% |
| CGAGGACATTCCAAATAATT+CGG | - | chr4_3:45294023-45294042 | None:intergenic | 35.0% | |
| ATAAGTTGCGATTTGATCCA+AGG | + | chr4_3:45294051-45294070 | Msa0642960:CDS | 35.0% | |
| ATCGTAATGAGCAAGAATTC+AGG | - | chr4_3:45294082-45294101 | None:intergenic | 35.0% | |
| GTTGTTCGTTAGAGAAAAGT+TGG | + | chr4_3:45294160-45294179 | Msa0642960:intron | 35.0% | |
| !! | TTTGAATGAGTAGCTCTAAC+TGG | + | chr4_3:45294189-45294208 | Msa0642960:intron | 35.0% |
| CAGTCTATCAAAAGACGAAT+AGG | - | chr4_3:45294466-45294485 | None:intergenic | 35.0% | |
| ACTTACTCTTAGCATGTGTT+TGG | + | chr4_3:45294599-45294618 | Msa0642960:intron | 35.0% | |
| ! | GTACTAAAGACTCGGTTAAT+CGG | - | chr4_3:45294957-45294976 | None:intergenic | 35.0% |
| TAAGACATACCCTAGCAAAT+AGG | - | chr4_3:45295136-45295155 | None:intergenic | 35.0% | |
| ! | TGCTCTTTGTTTAGGTTACA+TGG | - | chr4_3:45295250-45295269 | None:intergenic | 35.0% |
| !! | GTTTTAGCATTACCACATGA+TGG | + | chr4_3:45295421-45295440 | Msa0642960:intron | 35.0% |
| AAATAGTATCACCCATCATG+TGG | - | chr4_3:45295436-45295455 | None:intergenic | 35.0% | |
| !! | ACATGATGGGTGATACTATT+TGG | + | chr4_3:45295435-45295454 | Msa0642960:intron | 35.0% |
| TTAATTTACAGAGGGAAGCT+AGG | + | chr4_3:45295523-45295542 | Msa0642960:intron | 35.0% | |
| AGAATACATCAATCATCCTG+TGG | + | chr4_3:45295617-45295636 | Msa0642960:CDS | 35.0% | |
| GCTTGGGATATTGTACATAA+TGG | + | chr4_3:45295639-45295658 | Msa0642960:CDS | 35.0% | |
| CATGTAATGCGTTTCTTTAG+TGG | + | chr4_3:45295686-45295705 | Msa0642960:intron | 35.0% | |
| CGATTATCGCCTCAAAAATA+TGG | + | chr4_3:45295827-45295846 | Msa0642960:intron | 35.0% | |
| ATATGTGCTACAAGTTGCAA+AGG | + | chr4_3:45296203-45296222 | Msa0642960:CDS | 35.0% | |
| CCTTAAAAAGGATTGAGGAA+AGG | - | chr4_3:45296302-45296321 | None:intergenic | 35.0% | |
| ! | CCTTTCCTCAATCCTTTTTA+AGG | + | chr4_3:45296299-45296318 | Msa0642960:intron | 35.0% |
| CTTGACGGTATGTTATATGT+TGG | + | chr4_3:45296350-45296369 | Msa0642960:CDS | 35.0% | |
| !! | GTTATATGTTGGTCTTACTG+AGG | + | chr4_3:45296361-45296380 | Msa0642960:CDS | 35.0% |
| TGCAACAATGTTTGCAAATG+TGG | + | chr4_3:45296397-45296416 | Msa0642960:CDS | 35.0% | |
| ACAATGTTTGCAAATGTGGT+TGG | + | chr4_3:45296401-45296420 | Msa0642960:CDS | 35.0% | |
| !! | ATGGGTGAACTTTGTTATTG+AGG | + | chr4_3:45296849-45296868 | Msa0642960:intron | 35.0% |
| !! | CATTGATTTCAGATGACTGT+TGG | + | chr4_3:45297078-45297097 | Msa0642960:intron | 35.0% |
| GCTCCGTAAATTAGAAATAC+AGG | - | chr4_3:45297127-45297146 | None:intergenic | 35.0% | |
| !! | GCCTCTATTTCAAGTTACTT+AGG | + | chr4_3:45297351-45297370 | Msa0642960:intron | 35.0% |
| CCCTAAGTAACTTGAAATAG+AGG | - | chr4_3:45297355-45297374 | None:intergenic | 35.0% | |
| ACTTAGGGTGTATTTGAATG+AGG | + | chr4_3:45297367-45297386 | Msa0642960:intron | 35.0% | |
| TATTTGAATGAGGAGGGTTT+AGG | + | chr4_3:45297377-45297396 | Msa0642960:intron | 35.0% | |
| TTTGGATTGAGGGTTTATGA+GGG | - | chr4_3:45297586-45297605 | None:intergenic | 35.0% | |
| ATCACTGAGGTATAACTGTT+AGG | + | chr4_3:45298235-45298254 | Msa0642960:intron | 35.0% | |
| !! | AGATCTCTACTTGTTGATTC+AGG | + | chr4_3:45298710-45298729 | Msa0642960:intron | 35.0% |
| !! | GATCTCTACTTGTTGATTCA+GGG | + | chr4_3:45298711-45298730 | Msa0642960:intron | 35.0% |
| ATGAATATGTCATCATCCTG+TGG | + | chr4_3:45298835-45298854 | Msa0642960:CDS | 35.0% | |
| GACAGAATTACGTTCAGATT+TGG | + | chr4_3:45299013-45299032 | Msa0642960:three_prime_UTR | 35.0% | |
| GAGATCCCGAATTTCAATAC+AGG | + | chr4_3:45293008-45293027 | Msa0642960:five_prime_UTR | 40.0% | |
| TCCCGAATTTCAATACAGGT+AGG | + | chr4_3:45293012-45293031 | Msa0642960:intron | 40.0% | |
| CAAAACCAGAATGAAGAGAG+TGG | - | chr4_3:45293040-45293059 | None:intergenic | 40.0% | |
| TGAGAGAGTTGTGAAGAGTT+GGG | + | chr4_3:45293300-45293319 | Msa0642960:CDS | 40.0% | |
| TTCTTGCATGTTCCTAGAAC+CGG | + | chr4_3:45293388-45293407 | Msa0642960:CDS | 40.0% | |
| GTCTCTTTCAGCTTAATCAG+AGG | + | chr4_3:45293520-45293539 | Msa0642960:intron | 40.0% | |
| !!! | GTTTTGGGTTCAAACATCAG+TGG | + | chr4_3:45293542-45293561 | Msa0642960:intron | 40.0% |
| ATCAGTGGTAAGCATGTGTT+TGG | + | chr4_3:45293557-45293576 | Msa0642960:intron | 40.0% | |
| TACACCTCCAGAATCAATTC+TGG | + | chr4_3:45293813-45293832 | Msa0642960:intron | 40.0% | |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr4_3:45293840-45293859 | None:intergenic | 40.0% |
| ! | ATGTTTGGTTCCACTTCTAG+AGG | - | chr4_3:45293841-45293860 | None:intergenic | 40.0% |
| !! | TTAAGTTTTGTGGCCCATTG+TGG | + | chr4_3:45293873-45293892 | Msa0642960:intron | 40.0% |
| ACATGTTTGTTTGATGCGGT+TGG | + | chr4_3:45293962-45293981 | Msa0642960:intron | 40.0% | |
| CGCAACTTATCATAAGATCG+AGG | - | chr4_3:45294041-45294060 | None:intergenic | 40.0% | |
| GGGTTTAGATTCTTGTACGT+CGG | + | chr4_3:45294385-45294404 | Msa0642960:intron | 40.0% | |
| GGTTTAGATTCTTGTACGTC+GGG | + | chr4_3:45294386-45294405 | Msa0642960:intron | 40.0% | |
| GTTTAGATTCTTGTACGTCG+GGG | + | chr4_3:45294387-45294406 | Msa0642960:intron | 40.0% | |
| TGTACCCAACAAACTAATGG+CGG | + | chr4_3:45294520-45294539 | Msa0642960:intron | 40.0% | |
| !! | TGATCCGCCATTAGTTTGTT+GGG | - | chr4_3:45294527-45294546 | None:intergenic | 40.0% |
| !! | ATGATCCGCCATTAGTTTGT+TGG | - | chr4_3:45294528-45294547 | None:intergenic | 40.0% |
| CATGTGTTTGGATACACGTT+TGG | + | chr4_3:45294611-45294630 | Msa0642960:intron | 40.0% | |
| ! | TCGTTTCTGAAAATTCACGG+TGG | - | chr4_3:45294665-45294684 | None:intergenic | 40.0% |
| GTCTGTGGTTACCATACTTA+GGG | + | chr4_3:45294929-45294948 | Msa0642960:CDS | 40.0% | |
| GTTAATCGGATCCCTAAGTA+TGG | - | chr4_3:45294943-45294962 | None:intergenic | 40.0% | |
| ! | CGAATTTTCAATGGAGGTTG+CGG | + | chr4_3:45294980-45294999 | Msa0642960:CDS | 40.0% |
| TGTGTTGCAGATGTCAAGTT+TGG | - | chr4_3:45295023-45295042 | None:intergenic | 40.0% | |
| GAGTAAGCACATTGGATATC+TGG | + | chr4_3:45295075-45295094 | Msa0642960:CDS | 40.0% | |
| CATGGAACAAGATACTTCCA+AGG | - | chr4_3:45295101-45295120 | None:intergenic | 40.0% | |
| !! | CTTGGAAGTATCTTGTTCCA+TGG | + | chr4_3:45295099-45295118 | Msa0642960:CDS | 40.0% |
| AATAGGTCTTCTCTCATCCA+TGG | - | chr4_3:45295119-45295138 | None:intergenic | 40.0% | |
| TGAGAGAAGACCTATTTGCT+AGG | + | chr4_3:45295123-45295142 | Msa0642960:CDS | 40.0% | |
| ! | GAGAGAAGACCTATTTGCTA+GGG | + | chr4_3:45295124-45295143 | Msa0642960:CDS | 40.0% |
| AGGGAAGCTAGGTATAGTAA+GGG | + | chr4_3:45295534-45295553 | Msa0642960:CDS | 40.0% | |
| ! | ATTACATGTGCTGAAGTACC+TGG | - | chr4_3:45295674-45295693 | None:intergenic | 40.0% |
| CAGAACAGTAAACAGATTGC+AGG | - | chr4_3:45295800-45295819 | None:intergenic | 40.0% | |
| !!! | ATTTTTGAGGCGATAATCGG+AGG | - | chr4_3:45295826-45295845 | None:intergenic | 40.0% |
| ! | GGAATTTGGCATTGAGACAT+AGG | - | chr4_3:45295922-45295941 | None:intergenic | 40.0% |
| !! | TGGTGGATTGTTCAATCATC+AGG | + | chr4_3:45296098-45296117 | Msa0642960:CDS | 40.0% |
| ! | TTGTTCAATCATCAGGTTGC+AGG | + | chr4_3:45296105-45296124 | Msa0642960:CDS | 40.0% |
| ATCTTGCAGAAGAGACTTGA+CGG | + | chr4_3:45296335-45296354 | Msa0642960:intron | 40.0% | |
| ATAGTATCTAGGCTGGTGTT+TGG | - | chr4_3:45296455-45296474 | None:intergenic | 40.0% | |
| AAGAAGGGCTGAAAAGTTGT+CGG | + | chr4_3:45296540-45296559 | Msa0642960:intron | 40.0% | |
| CTCATATTCTTGCATTCACC+TGG | + | chr4_3:45296596-45296615 | Msa0642960:intron | 40.0% | |
| AATGATCTTTGGGTGTGCTT+TGG | + | chr4_3:45296682-45296701 | Msa0642960:intron | 40.0% | |
| !! | ATCAGGTAAGAAGCATCTCT+TGG | + | chr4_3:45296826-45296845 | Msa0642960:intron | 40.0% |
| !! | GTAAGAAGCATCTCTTGGAT+GGG | + | chr4_3:45296831-45296850 | Msa0642960:intron | 40.0% |
| TGCAATACAGAATAGCACCT+CGG | + | chr4_3:45296908-45296927 | Msa0642960:intron | 40.0% | |
| GAGGCTACTTCAACTGAAAA+TGG | + | chr4_3:45296945-45296964 | Msa0642960:CDS | 40.0% | |
| ACCATATTTGCCAAGGAAAC+AGG | - | chr4_3:45296995-45297014 | None:intergenic | 40.0% | |
| GATTCCGGTGAACTTTACAA+AGG | + | chr4_3:45297182-45297201 | Msa0642960:CDS | 40.0% | |
| ACCTCCTTTGTAAAGTTCAC+CGG | - | chr4_3:45297189-45297208 | None:intergenic | 40.0% | |
| TTCACTATCATTATGTGGCG+TGG | + | chr4_3:45297254-45297273 | Msa0642960:intron | 40.0% | |
| TAGGGTGTATTTGAATGAGG+AGG | + | chr4_3:45297370-45297389 | Msa0642960:intron | 40.0% | |
| AGGGTGTATTTGAATGAGGA+GGG | + | chr4_3:45297371-45297390 | Msa0642960:intron | 40.0% | |
| TTGGATTGAGGGTTTATGAG+GGG | - | chr4_3:45297585-45297604 | None:intergenic | 40.0% | |
| GTTTGGATTGAGGGTTTATG+AGG | - | chr4_3:45297587-45297606 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr4_3:45297596-45297615 | None:intergenic | 40.0% |
| ! | TTAAGGGTGTGTTTGGATTG+AGG | - | chr4_3:45297597-45297616 | None:intergenic | 40.0% |
| CCAAACACACCCTTAATCTT+CGG | + | chr4_3:45297601-45297620 | Msa0642960:intron | 40.0% | |
| CACCGAAAAGCCAGTAAAAA+AGG | - | chr4_3:45297850-45297869 | None:intergenic | 40.0% | |
| !!! | CTTTTTTACTGGCTTTTCGG+TGG | + | chr4_3:45297848-45297867 | Msa0642960:intron | 40.0% |
| GTCTCTTAACGATCTTGACT+TGG | + | chr4_3:45298156-45298175 | Msa0642960:CDS | 40.0% | |
| TATCCATGGCTGCAAAAGAT+TGG | + | chr4_3:45298306-45298325 | Msa0642960:intron | 40.0% | |
| GAGATGCTACTCTGTAAACT+TGG | + | chr4_3:45298661-45298680 | Msa0642960:intron | 40.0% | |
| CTTGGCTACACAACCAAAAA+CGG | + | chr4_3:45298679-45298698 | Msa0642960:intron | 40.0% | |
| ATATGTCATCATCCTGTGGA+AGG | + | chr4_3:45298839-45298858 | Msa0642960:CDS | 40.0% | |
| CTAATGTAAGAACCTTCCAC+AGG | - | chr4_3:45298854-45298873 | None:intergenic | 40.0% | |
| GAAGAACGTCGAAGGTAAAA+AGG | + | chr4_3:45298928-45298947 | Msa0642960:CDS | 40.0% | |
| !! | TAGGAACGGTGATGGAAATA+TGG | - | chr4_3:45299049-45299068 | None:intergenic | 40.0% |
| ! | TTCGATGTTTTGTCCACTGA+TGG | + | chr4_3:45299087-45299106 | Msa0642960:three_prime_UTR | 40.0% |
| ! | TCGATGTTTTGTCCACTGAT+GGG | + | chr4_3:45299088-45299107 | Msa0642960:three_prime_UTR | 40.0% |
| !! | ATGCTGCTGATTCACTCTAA+TGG | - | chr4_3:45299186-45299205 | None:intergenic | 40.0% |
| ! | AGAGTGAATCAGCAGCATTT+TGG | + | chr4_3:45299188-45299207 | Msa0642960:three_prime_UTR | 40.0% |
| ACTTGTGTGGTCACAAGATT+TGG | - | chr4_3:45299325-45299344 | None:intergenic | 40.0% | |
| !! | AACAAAGGGTTCTGGAATCG+CGG | + | chr4_3:45292938-45292957 | Msa0642960:five_prime_UTR | 45.0% |
| ! | CAACAGTGTTGGGATTCGAT+GGG | - | chr4_3:45292971-45292990 | None:intergenic | 45.0% |
| ! | ACAACAGTGTTGGGATTCGA+TGG | - | chr4_3:45292972-45292991 | None:intergenic | 45.0% |
| TTCGCGTTCCTCATTCTCTT+TGG | + | chr4_3:45293154-45293173 | Msa0642960:CDS | 45.0% | |
| GTGAGAGAGTTGTGAAGAGT+TGG | + | chr4_3:45293299-45293318 | Msa0642960:CDS | 45.0% | |
| ATGAAAATAAGCGCGTCCTC+CGG | - | chr4_3:45293410-45293429 | None:intergenic | 45.0% | |
| !! | GAGGACGCGCTTATTTTCAT+TGG | + | chr4_3:45293410-45293429 | Msa0642960:CDS | 45.0% |
| CACGAAACATCCCATCCAAA+CGG | - | chr4_3:45293501-45293520 | None:intergenic | 45.0% | |
| !! | CATGTGTTTGGTTCTGCGTT+GGG | + | chr4_3:45293569-45293588 | Msa0642960:intron | 45.0% |
| !! | ATGTGTTTGGTTCTGCGTTG+GGG | + | chr4_3:45293570-45293589 | Msa0642960:intron | 45.0% |
| ! | AGAGGGACCAGAATTGATTC+TGG | - | chr4_3:45293823-45293842 | None:intergenic | 45.0% |
| ! | AATTCTGGTCCCTCTAGAAG+TGG | + | chr4_3:45293828-45293847 | Msa0642960:intron | 45.0% |
| GAGCCAGATAAGACCACAAT+GGG | - | chr4_3:45293889-45293908 | None:intergenic | 45.0% | |
| CAAGAATTCAGGCATCACCT+TGG | - | chr4_3:45294071-45294090 | None:intergenic | 45.0% | |
| CATAGGGACGCAAAAAACAG+TGG | - | chr4_3:45294637-45294656 | None:intergenic | 45.0% | |
| ATTCACGGTGGAACAGCATA+GGG | - | chr4_3:45294653-45294672 | None:intergenic | 45.0% | |
| AATTCACGGTGGAACAGCAT+AGG | - | chr4_3:45294654-45294673 | None:intergenic | 45.0% | |
| CGTCTGTGGTTACCATACTT+AGG | + | chr4_3:45294928-45294947 | Msa0642960:CDS | 45.0% | |
| CTTGACATCTGCAACACAGA+TGG | + | chr4_3:45295025-45295044 | Msa0642960:CDS | 45.0% | |
| GGCTAAAGGAGTAAGCACAT+TGG | + | chr4_3:45295067-45295086 | Msa0642960:CDS | 45.0% | |
| ! | GGGCTTCATGCTCTTTGTTT+AGG | - | chr4_3:45295258-45295277 | None:intergenic | 45.0% |
| GAGGGAAGCTAGGTATAGTA+AGG | + | chr4_3:45295533-45295552 | Msa0642960:intron | 45.0% | |
| ACATCAATCATCCTGTGGCT+TGG | + | chr4_3:45295622-45295641 | Msa0642960:CDS | 45.0% | |
| CATCAATCATCCTGTGGCTT+GGG | + | chr4_3:45295623-45295642 | Msa0642960:CDS | 45.0% | |
| TGTACAATATCCCAAGCCAC+AGG | - | chr4_3:45295636-45295655 | None:intergenic | 45.0% | |
| ! | ACATAATGGAGCCACATTCC+AGG | + | chr4_3:45295653-45295672 | Msa0642960:CDS | 45.0% |
| ! | GCGTTTCTTTAGTGGTGTTG+AGG | + | chr4_3:45295694-45295713 | Msa0642960:intron | 45.0% |
| ! | TGGCATTGAGACATAGGTCA+AGG | - | chr4_3:45295916-45295935 | None:intergenic | 45.0% |
| ! | TGCAAATGTGGTTGGTTCTC+AGG | + | chr4_3:45296409-45296428 | Msa0642960:CDS | 45.0% |
| AGAAGGGCTGAAAAGTTGTC+GGG | + | chr4_3:45296541-45296560 | Msa0642960:intron | 45.0% | |
| GTCGGGAATGGTACAGAATT+TGG | + | chr4_3:45296558-45296577 | Msa0642960:intron | 45.0% | |
| TCCTGATAGCAGTGAACATC+AGG | + | chr4_3:45296809-45296828 | Msa0642960:CDS | 45.0% | |
| ACCTGATGTTCACTGCTATC+AGG | - | chr4_3:45296813-45296832 | None:intergenic | 45.0% | |
| !! | GGTAAGAAGCATCTCTTGGA+TGG | + | chr4_3:45296830-45296849 | Msa0642960:intron | 45.0% |
| CAACTGTAAGCCTGTTTCCT+TGG | + | chr4_3:45296982-45297001 | Msa0642960:intron | 45.0% | |
| GCCTGTTTCCTTGGCAAATA+TGG | + | chr4_3:45296991-45297010 | Msa0642960:intron | 45.0% | |
| GATGACTGTTGGGAAACTCA+TGG | + | chr4_3:45297089-45297108 | Msa0642960:intron | 45.0% | |
| AATTTACGGAGCTCCCAATC+AGG | + | chr4_3:45297135-45297154 | Msa0642960:CDS | 45.0% | |
| TCTTCAAAGAGGAGATGCGT+CGG | - | chr4_3:45297161-45297180 | None:intergenic | 45.0% | |
| ! | CTCCTCTTTGAAGAGGATTC+CGG | + | chr4_3:45297167-45297186 | Msa0642960:CDS | 45.0% |
| TCCGGTGAACTTTACAAAGG+AGG | + | chr4_3:45297185-45297204 | Msa0642960:CDS | 45.0% | |
| TTGAATGAGGAGGGTTTAGG+AGG | + | chr4_3:45297380-45297399 | Msa0642960:intron | 45.0% | |
| TGAATGAGGAGGGTTTAGGA+GGG | + | chr4_3:45297381-45297400 | Msa0642960:intron | 45.0% | |
| ATTGAGGGTTTATGAGGGGA+AGG | - | chr4_3:45297581-45297600 | None:intergenic | 45.0% | |
| ! | CCGAAGATTAAGGGTGTGTT+TGG | - | chr4_3:45297604-45297623 | None:intergenic | 45.0% |
| ! | CTACCAATCTTTTGCAGCCA+TGG | - | chr4_3:45298312-45298331 | None:intergenic | 45.0% |
| TGCAAGAAGAAGAACGTCGA+AGG | + | chr4_3:45298920-45298939 | Msa0642960:CDS | 45.0% | |
| TTGCGTTATAGGAACGGTGA+TGG | - | chr4_3:45299057-45299076 | None:intergenic | 45.0% | |
| !! | TGTTTTGTCCACTGATGGGT+AGG | + | chr4_3:45299092-45299111 | Msa0642960:three_prime_UTR | 45.0% |
| !! | GTTTTGTCCACTGATGGGTA+GGG | + | chr4_3:45299093-45299112 | Msa0642960:three_prime_UTR | 45.0% |
| AGGTCCCACTCTCTTCATTC+TGG | + | chr4_3:45293032-45293051 | Msa0642960:intron | 50.0% | |
| TTGCATGTTCCTAGAACCGG+AGG | + | chr4_3:45293391-45293410 | Msa0642960:CDS | 50.0% | |
| ATCCCATCCAAACGGTCTTG+CGG | - | chr4_3:45293493-45293512 | None:intergenic | 50.0% | |
| !! | GCATGTGTTTGGTTCTGCGT+TGG | + | chr4_3:45293568-45293587 | Msa0642960:intron | 50.0% |
| ! | GGGACCAGAATTGATTCTGG+AGG | - | chr4_3:45293820-45293839 | None:intergenic | 50.0% |
| !! | TGGCCCATTGTGGTCTTATC+TGG | + | chr4_3:45293883-45293902 | Msa0642960:intron | 50.0% |
| CGAGCCAGATAAGACCACAA+TGG | - | chr4_3:45293890-45293909 | None:intergenic | 50.0% | |
| !! | TTGTGGTCTTATCTGGCTCG+AGG | + | chr4_3:45293890-45293909 | Msa0642960:intron | 50.0% |
| !! | TGTGGTCTTATCTGGCTCGA+GGG | + | chr4_3:45293891-45293910 | Msa0642960:intron | 50.0% |
| ! | AGCTCTAACTGGTACAGACG+TGG | + | chr4_3:45294200-45294219 | Msa0642960:intron | 50.0% |
| GCTCTAACTGGTACAGACGT+GGG | + | chr4_3:45294201-45294220 | Msa0642960:intron | 50.0% | |
| TCCAAAGGAGAGAACGTCTG+TGG | + | chr4_3:45294914-45294933 | Msa0642960:CDS | 50.0% | |
| ACCACAGACGTTCTCTCCTT+TGG | - | chr4_3:45294918-45294937 | None:intergenic | 50.0% | |
| ! | GGAGGTTGCGGCTAGATTTT+TGG | + | chr4_3:45294992-45295011 | Msa0642960:CDS | 50.0% |
| GCACATTGGATATCTGGCCT+TGG | + | chr4_3:45295081-45295100 | Msa0642960:CDS | 50.0% | |
| ! | GTGCTGAAGTACCTGGAATG+TGG | - | chr4_3:45295667-45295686 | None:intergenic | 50.0% |
| GATTGAGGAAAGGAGCAGCT+GGG | - | chr4_3:45296292-45296311 | None:intergenic | 50.0% | |
| GGCTGAAAAGTTGTCGGGAA+TGG | + | chr4_3:45296546-45296565 | Msa0642960:intron | 50.0% | |
| TACAGAATAGCACCTCGGAC+AGG | + | chr4_3:45296913-45296932 | Msa0642960:intron | 50.0% | |
| ACAGAATAGCACCTCGGACA+GGG | + | chr4_3:45296914-45296933 | Msa0642960:intron | 50.0% | |
| ! | GACGCATCTCCTCTTTGAAG+AGG | + | chr4_3:45297160-45297179 | Msa0642960:CDS | 50.0% |
| CACCGGAATCCTCTTCAAAG+AGG | - | chr4_3:45297172-45297191 | None:intergenic | 50.0% | |
| GGTTTATGAGGGGAAGGAAG+GGG | - | chr4_3:45297575-45297594 | None:intergenic | 50.0% | |
| GGGTTTATGAGGGGAAGGAA+GGG | - | chr4_3:45297576-45297595 | None:intergenic | 50.0% | |
| AGGGTTTATGAGGGGAAGGA+AGG | - | chr4_3:45297577-45297596 | None:intergenic | 50.0% | |
| ! | ACGACTTCAAGTTCCCGAAG+AGG | + | chr4_3:45298117-45298136 | Msa0642960:CDS | 50.0% |
| TAGCTGCTGGAGAACCTCTT+CGG | - | chr4_3:45298134-45298153 | None:intergenic | 50.0% | |
| AAGAGGTTCTCCAGCAGCTA+CGG | + | chr4_3:45298134-45298153 | Msa0642960:CDS | 50.0% | |
| AACCTCATCGCTGATCACTG+AGG | + | chr4_3:45298222-45298241 | Msa0642960:CDS | 50.0% | |
| TACCTCAGTGATCAGCGATG+AGG | - | chr4_3:45298227-45298246 | None:intergenic | 50.0% | |
| CACAAAACCCTACCCATCAG+TGG | - | chr4_3:45299103-45299122 | None:intergenic | 50.0% | |
| !! | CTGATGGGTAGGGTTTTGTG+AGG | + | chr4_3:45299103-45299122 | Msa0642960:three_prime_UTR | 50.0% |
| GGCTTTACGCTTGCGCTCTA+AGG | + | chr4_3:45295046-45295065 | Msa0642960:CDS | 55.0% | |
| !! | CGCTTGCGCTCTAAGGCTAA+AGG | + | chr4_3:45295053-45295072 | Msa0642960:CDS | 55.0% |
| AGGAAAGGAGCAGCTGGGAA+GGG | - | chr4_3:45296287-45296306 | None:intergenic | 55.0% | |
| GGATTGAGGAAAGGAGCAGC+TGG | - | chr4_3:45296293-45296312 | None:intergenic | 55.0% | |
| CAGAATAGCACCTCGGACAG+GGG | + | chr4_3:45296915-45296934 | Msa0642960:intron | 55.0% | |
| ATGAGGAGGGTTTAGGAGGG+AGG | + | chr4_3:45297384-45297403 | Msa0642960:intron | 55.0% | |
| TGAGGAGGGTTTAGGAGGGA+GGG | + | chr4_3:45297385-45297404 | Msa0642960:intron | 55.0% | |
| TTATGAGGGGAAGGAAGGGG+AGG | - | chr4_3:45297572-45297591 | None:intergenic | 55.0% | |
| AGCTGCTGGAGAACCTCTTC+GGG | - | chr4_3:45298133-45298152 | None:intergenic | 55.0% | |
| CGTTAAGAGACCGTAGCTGC+TGG | - | chr4_3:45298147-45298166 | None:intergenic | 55.0% | |
| TAAGCGCGTCCTCCGGTTCT+AGG | - | chr4_3:45293403-45293422 | None:intergenic | 60.0% | |
| ATCCAAACGGTCTTGCGGCC+CGG | - | chr4_3:45293488-45293507 | None:intergenic | 60.0% | |
| GGCCGCAAGACCGTTTGGAT+GGG | + | chr4_3:45293488-45293507 | Msa0642960:intron | 60.0% | |
| CTGGTACAGACGTGGGCTTG+TGG | + | chr4_3:45294208-45294227 | Msa0642960:intron | 60.0% | |
| AAAGGAGCAGCTGGGAAGGG+GGG | - | chr4_3:45296284-45296303 | None:intergenic | 60.0% | |
| GAAAGGAGCAGCTGGGAAGG+GGG | - | chr4_3:45296285-45296304 | None:intergenic | 60.0% | |
| GGAAAGGAGCAGCTGGGAAG+GGG | - | chr4_3:45296286-45296305 | None:intergenic | 60.0% | |
| GAGGAAAGGAGCAGCTGGGA+AGG | - | chr4_3:45296288-45296307 | None:intergenic | 60.0% | |
| ! | GGAGATGCGTCGGCCTGATT+GGG | - | chr4_3:45297151-45297170 | None:intergenic | 60.0% |
| ! | AGGAGATGCGTCGGCCTGAT+TGG | - | chr4_3:45297152-45297171 | None:intergenic | 60.0% |
| AACCGGGCCGCAAGACCGTT+TGG | + | chr4_3:45293483-45293502 | Msa0642960:intron | 65.0% | |
| GGGCCGCAAGACCGTTTGGA+TGG | + | chr4_3:45293487-45293506 | Msa0642960:intron | 65.0% | |
| AAGGAGCAGCTGGGAAGGGG+GGG | - | chr4_3:45296283-45296302 | None:intergenic | 65.0% | |
| AGGAGCAGCTGGGAAGGGGG+GGG | - | chr4_3:45296282-45296301 | None:intergenic | 70.0% | |
| CTCGCTTGCTCCCCTGTCCG+AGG | - | chr4_3:45296928-45296947 | None:intergenic | 70.0% | |
| CTCGGACAGGGGAGCAAGCG+AGG | + | chr4_3:45296926-45296945 | Msa0642960:CDS | 70.0% | |
| AGCAGCTGGGAAGGGGGGGG+GGG | - | chr4_3:45296279-45296298 | None:intergenic | 75.0% | |
| GAGCAGCTGGGAAGGGGGGG+GGG | - | chr4_3:45296280-45296299 | None:intergenic | 75.0% | |
| GGAGCAGCTGGGAAGGGGGG+GGG | - | chr4_3:45296281-45296300 | None:intergenic | 75.0% | |
| ! | AGCTGGGAAGGGGGGGGGGG+GGG | - | chr4_3:45296276-45296295 | None:intergenic | 80.0% |
| ! | CAGCTGGGAAGGGGGGGGGG+GGG | - | chr4_3:45296277-45296296 | None:intergenic | 80.0% |
| ! | GCAGCTGGGAAGGGGGGGGG+GGG | - | chr4_3:45296278-45296297 | None:intergenic | 80.0% |
| ! | TGGGAAGGGGGGGGGGGGGG+GGG | - | chr4_3:45296273-45296292 | None:intergenic | 85.0% |
| ! | CTGGGAAGGGGGGGGGGGGG+GGG | - | chr4_3:45296274-45296293 | None:intergenic | 85.0% |
| ! | GCTGGGAAGGGGGGGGGGGG+GGG | - | chr4_3:45296275-45296294 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45292756 | 45299351 | 45292756 | ID=Msa0642960;Name=Msa0642960 |
| chr4_3 | mRNA | 45292756 | 45299351 | 45292756 | ID=Msa0642960-mRNA-1;Parent=Msa0642960;Name=Msa0642960-mRNA-1;_AED=0.08;_eAED=0.08;_QI=270|0.92|0.92|1|0.76|0.78|14|398|498 |
| chr4_3 | exon | 45292756 | 45292812 | 45292756 | ID=Msa0642960-mRNA-1:exon:10441;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45292836 | 45293029 | 45292836 | ID=Msa0642960-mRNA-1:exon:10442;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45293114 | 45293181 | 45293114 | ID=Msa0642960-mRNA-1:exon:10443;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45293263 | 45293431 | 45293263 | ID=Msa0642960-mRNA-1:exon:10444;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45294001 | 45294072 | 45294001 | ID=Msa0642960-mRNA-1:exon:10445;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45294857 | 45295145 | 45294857 | ID=Msa0642960-mRNA-1:exon:10446;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45295534 | 45295674 | 45295534 | ID=Msa0642960-mRNA-1:exon:10447;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45296096 | 45296224 | 45296096 | ID=Msa0642960-mRNA-1:exon:10448;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45296344 | 45296485 | 45296344 | ID=Msa0642960-mRNA-1:exon:10449;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45296784 | 45296830 | 45296784 | ID=Msa0642960-mRNA-1:exon:10450;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45296918 | 45296986 | 45296918 | ID=Msa0642960-mRNA-1:exon:10451;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45297090 | 45297206 | 45297090 | ID=Msa0642960-mRNA-1:exon:10452;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45298115 | 45298243 | 45298115 | ID=Msa0642960-mRNA-1:exon:10453;Parent=Msa0642960-mRNA-1 |
| chr4_3 | exon | 45298810 | 45299351 | 45298810 | ID=Msa0642960-mRNA-1:exon:10454;Parent=Msa0642960-mRNA-1 |
| chr4_3 | five_prime_UTR | 45292756 | 45292812 | 45292756 | ID=Msa0642960-mRNA-1:five_prime_utr;Parent=Msa0642960-mRNA-1 |
| chr4_3 | five_prime_UTR | 45292836 | 45293029 | 45292836 | ID=Msa0642960-mRNA-1:five_prime_utr;Parent=Msa0642960-mRNA-1 |
| chr4_3 | five_prime_UTR | 45293114 | 45293132 | 45293114 | ID=Msa0642960-mRNA-1:five_prime_utr;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45293133 | 45293181 | 45293133 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45293263 | 45293431 | 45293263 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45294001 | 45294072 | 45294001 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45294857 | 45295145 | 45294857 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45295534 | 45295674 | 45295534 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45296096 | 45296224 | 45296096 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45296344 | 45296485 | 45296344 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45296784 | 45296830 | 45296784 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45296918 | 45296986 | 45296918 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45297090 | 45297206 | 45297090 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45298115 | 45298243 | 45298115 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | CDS | 45298810 | 45298953 | 45298810 | ID=Msa0642960-mRNA-1:cds;Parent=Msa0642960-mRNA-1 |
| chr4_3 | three_prime_UTR | 45298954 | 45299351 | 45298954 | ID=Msa0642960-mRNA-1:three_prime_utr;Parent=Msa0642960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
