Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358500 | XP_003630160.2 | 97.273 | 440 | 12 | 0 | 38 | 477 | 2 | 441 | 0.0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358500 | sp|Q9FIB6|PS12A_ARATH | 80.460 | 435 | 84 | 1 | 43 | 476 | 7 | 441 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358500 | B7FLC5 | 97.273 | 440 | 12 | 0 | 38 | 477 | 2 | 441 | 0.0 | 873 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1358500 | 0.811610 | 6.424137e-51 | -8.615850e-47 |
| Msa0007440 | Msa1358500 | 0.824768 | 6.749043e-54 | -8.615850e-47 |
| Msa0029240 | Msa1358500 | 0.809037 | 2.305890e-50 | -8.615850e-47 |
| Msa0030160 | Msa1358500 | 0.801748 | 7.776803e-49 | -8.615850e-47 |
| Msa0032470 | Msa1358500 | 0.834789 | 2.445483e-56 | -8.615850e-47 |
| Msa0036140 | Msa1358500 | 0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0037570 | Msa1358500 | -0.818977 | 1.478920e-52 | -8.615850e-47 |
| Msa0043980 | Msa1358500 | 0.837540 | 4.893825e-57 | -8.615850e-47 |
| Msa0044260 | Msa1358500 | 0.809719 | 1.646867e-50 | -8.615850e-47 |
| Msa0044330 | Msa1358500 | 0.829937 | 3.892481e-55 | -8.615850e-47 |
| Msa0047110 | Msa1358500 | 0.801768 | 7.704628e-49 | -8.615850e-47 |
| Msa0065680 | Msa1358500 | -0.802618 | 5.150869e-49 | -8.615850e-47 |
| Msa0071250 | Msa1358500 | 0.841575 | 4.371654e-58 | -8.615850e-47 |
| Msa0072120 | Msa1358500 | 0.804149 | 2.480905e-49 | -8.615850e-47 |
| Msa0072420 | Msa1358500 | 0.803091 | 4.112156e-49 | -8.615850e-47 |
| Msa0076320 | Msa1358500 | 0.806323 | 8.696795e-50 | -8.615850e-47 |
| Msa0079070 | Msa1358500 | 0.815512 | 8.899541e-52 | -8.615850e-47 |
| Msa0079130 | Msa1358500 | 0.809138 | 2.194141e-50 | -8.615850e-47 |
| Msa0104230 | Msa1358500 | 0.816670 | 4.907160e-52 | -8.615850e-47 |
| Msa0104240 | Msa1358500 | 0.813773 | 2.159827e-51 | -8.615850e-47 |
| Msa0112770 | Msa1358500 | 0.817050 | 4.032018e-52 | -8.615850e-47 |
| Msa0117520 | Msa1358500 | 0.827572 | 1.453164e-54 | -8.615850e-47 |
| Msa1345940 | Msa1358500 | 0.804675 | 1.927317e-49 | -8.615850e-47 |
| Msa1346840 | Msa1358500 | 0.870988 | 9.625517e-67 | -8.615850e-47 |
| Msa1347760 | Msa1358500 | 0.813434 | 2.564266e-51 | -8.615850e-47 |
| Msa1352280 | Msa1358500 | -0.820890 | 5.399950e-53 | -8.615850e-47 |
| Msa1353980 | Msa1358500 | 0.801604 | 8.325271e-49 | -8.615850e-47 |
| Msa1355890 | Msa1358500 | 0.819013 | 1.451080e-52 | -8.615850e-47 |
| Msa1358500 | Msa1363820 | -0.814152 | 1.781899e-51 | -8.615850e-47 |
| Msa1358500 | Msa1364210 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa1358500 | Msa1368360 | 0.810936 | 8.995294e-51 | -8.615850e-47 |
| Msa1358500 | Msa1371940 | 0.812415 | 4.288369e-51 | -8.615850e-47 |
| Msa1358500 | Msa1373030 | 0.804473 | 2.124139e-49 | -8.615850e-47 |
| Msa1358500 | Msa1374470 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa1358500 | Msa1378410 | 0.807091 | 5.985628e-50 | -8.615850e-47 |
| Msa1358500 | Msa1380220 | 0.838853 | 2.246398e-57 | -8.615850e-47 |
| Msa1358500 | Msa1382790 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa1358500 | Msa1392780 | 0.800562 | 1.359428e-48 | -8.615850e-47 |
| Msa1358500 | Msa1393570 | 0.844111 | 9.256203e-59 | -8.615850e-47 |
| Msa1358500 | Msa1394380 | 0.821961 | 3.055392e-53 | -8.615850e-47 |
| Msa1358500 | Msa1400580 | 0.802640 | 5.097207e-49 | -8.615850e-47 |
| Msa1358500 | Msa1401990 | 0.837680 | 4.505975e-57 | -8.615850e-47 |
| Msa1358500 | Msa1407190 | 0.825679 | 4.110326e-54 | -8.615850e-47 |
| Msa1358500 | Msa1407800 | 0.809561 | 1.780489e-50 | -8.615850e-47 |
| Msa1358500 | Msa1412130 | 0.838990 | 2.071073e-57 | -8.615850e-47 |
| Msa1358500 | Msa1413610 | 0.802338 | 5.881740e-49 | -8.615850e-47 |
| Msa1358500 | Msa1419690 | 0.846159 | 2.588146e-59 | -8.615850e-47 |
| Msa1358500 | Msa1425260 | 0.846095 | 2.693961e-59 | -8.615850e-47 |
| Msa1358500 | Msa1432130 | 0.817837 | 2.680297e-52 | -8.615850e-47 |
| Msa1358500 | Msa1436600 | 0.800585 | 1.345289e-48 | -8.615850e-47 |
| Msa1358500 | Msa1437730 | 0.822829 | 1.920800e-53 | -8.615850e-47 |
| Msa1358500 | Msa1437770 | 0.803551 | 3.303645e-49 | -8.615850e-47 |
| Msa1358500 | Msa1440310 | 0.812345 | 4.443211e-51 | -8.615850e-47 |
| Msa1358500 | Msa1440560 | 0.801498 | 8.750619e-49 | -8.615850e-47 |
| Msa1358500 | Msa1442920 | 0.823933 | 1.060686e-53 | -8.615850e-47 |
| Msa1358500 | Msa1445390 | -0.818401 | 1.997903e-52 | -8.615850e-47 |
| Msa1358500 | Msa1448560 | 0.832320 | 1.011277e-55 | -8.615850e-47 |
| Msa1358500 | Msa1449340 | -0.819540 | 1.100837e-52 | -8.615850e-47 |
| Msa1358500 | Msa1452710 | 0.853458 | 2.357571e-61 | -8.615850e-47 |
| Msa1358500 | Msa1453880 | 0.813463 | 2.527270e-51 | -8.615850e-47 |
| Msa1358500 | Msa1454620 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa1358500 | Msa1458680 | 0.825055 | 5.774044e-54 | -8.615850e-47 |
| Msa1358500 | Msa1460050 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
| Msa1358500 | Msa1463900 | 0.840175 | 1.018638e-57 | -8.615850e-47 |
| Msa0614920 | Msa1358500 | 0.817864 | 2.643340e-52 | -8.615850e-47 |
| Msa0617640 | Msa1358500 | 0.802109 | 6.557796e-49 | -8.615850e-47 |
| Msa0618970 | Msa1358500 | 0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa0624060 | Msa1358500 | 0.806593 | 7.630120e-50 | -8.615850e-47 |
| Msa0625720 | Msa1358500 | 0.804418 | 2.181340e-49 | -8.615850e-47 |
| Msa0642730 | Msa1358500 | 0.810440 | 1.151281e-50 | -8.615850e-47 |
| Msa0642960 | Msa1358500 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
| Msa0658890 | Msa1358500 | 0.924955 | 3.520813e-90 | -8.615850e-47 |
| Msa0663390 | Msa1358500 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
| Msa0667770 | Msa1358500 | 0.814893 | 1.221892e-51 | -8.615850e-47 |
| Msa0667790 | Msa1358500 | 0.820512 | 6.595059e-53 | -8.615850e-47 |
| Msa0672550 | Msa1358500 | 0.809569 | 1.773637e-50 | -8.615850e-47 |
| Msa0676130 | Msa1358500 | 0.803608 | 3.214475e-49 | -8.615850e-47 |
| Msa0676180 | Msa1358500 | 0.805890 | 1.072902e-49 | -8.615850e-47 |
| Msa0681250 | Msa1358500 | 0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0705320 | Msa1358500 | 0.835690 | 1.448910e-56 | -8.615850e-47 |
| Msa0705990 | Msa1358500 | 0.805669 | 1.194207e-49 | -8.615850e-47 |
| Msa0707250 | Msa1358500 | 0.846464 | 2.136408e-59 | -8.615850e-47 |
| Msa0711100 | Msa1358500 | 0.823283 | 1.505952e-53 | -8.615850e-47 |
| Msa0711150 | Msa1358500 | 0.844705 | 6.405819e-59 | -8.615850e-47 |
| Msa0711450 | Msa1358500 | 0.842015 | 3.346638e-58 | -8.615850e-47 |
| Msa0711780 | Msa1358500 | 0.803268 | 3.780790e-49 | -8.615850e-47 |
| Msa0722630 | Msa1358500 | 0.803081 | 4.132269e-49 | -8.615850e-47 |
| Msa0724170 | Msa1358500 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0733010 | Msa1358500 | 0.842708 | 2.192907e-58 | -8.615850e-47 |
| Msa0738030 | Msa1358500 | 0.818071 | 2.373818e-52 | -8.615850e-47 |
| Msa0741440 | Msa1358500 | 0.857836 | 1.243885e-62 | -8.615850e-47 |
| Msa0743930 | Msa1358500 | 0.844650 | 6.631067e-59 | -8.615850e-47 |
| Msa0749440 | Msa1358500 | 0.816315 | 5.893291e-52 | -8.615850e-47 |
| Msa0750850 | Msa1358500 | 0.855465 | 6.196598e-62 | -8.615850e-47 |
| Msa0751850 | Msa1358500 | 0.823060 | 1.697108e-53 | -8.615850e-47 |
| Msa0760180 | Msa1358500 | 0.801653 | 8.135241e-49 | -8.615850e-47 |
| Msa0760250 | Msa1358500 | 0.807455 | 5.013223e-50 | -8.615850e-47 |
| Msa0784480 | Msa1358500 | 0.805938 | 1.048002e-49 | -8.615850e-47 |
| Msa0786750 | Msa1358500 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0794670 | Msa1358500 | 0.803623 | 3.190966e-49 | -8.615850e-47 |
| Msa0805960 | Msa1358500 | 0.829650 | 4.572167e-55 | -8.615850e-47 |
| Msa0811520 | Msa1358500 | 0.826187 | 3.112317e-54 | -8.615850e-47 |
| Msa0816130 | Msa1358500 | 0.824140 | 9.486707e-54 | -8.615850e-47 |
| Msa0817460 | Msa1358500 | 0.846550 | 2.024756e-59 | -8.615850e-47 |
| Msa0818060 | Msa1358500 | 0.814084 | 1.844784e-51 | -8.615850e-47 |
| Msa0822500 | Msa1358500 | 0.859035 | 5.462285e-63 | -8.615850e-47 |
| Msa0830230 | Msa1358500 | 0.854479 | 1.198097e-61 | -8.615850e-47 |
| Msa0831110 | Msa1358500 | 0.822127 | 2.797258e-53 | -8.615850e-47 |
| Msa0831850 | Msa1358500 | 0.820482 | 6.701255e-53 | -8.615850e-47 |
| Msa0832150 | Msa1358500 | 0.843444 | 1.395762e-58 | -8.615850e-47 |
| Msa0832340 | Msa1358500 | 0.833422 | 5.381169e-56 | -8.615850e-47 |
| Msa0835800 | Msa1358500 | 0.842113 | 3.152292e-58 | -8.615850e-47 |
| Msa0125650 | Msa1358500 | 0.807366 | 5.235316e-50 | -8.615850e-47 |
| Msa0127020 | Msa1358500 | 0.829991 | 3.776386e-55 | -8.615850e-47 |
| Msa0127800 | Msa1358500 | 0.808999 | 2.350439e-50 | -8.615850e-47 |
| Msa0138020 | Msa1358500 | 0.860394 | 2.129490e-63 | -8.615850e-47 |
| Msa0140500 | Msa1358500 | -0.818901 | 1.538585e-52 | -8.615850e-47 |
| Msa0144530 | Msa1358500 | 0.809141 | 2.190574e-50 | -8.615850e-47 |
| Msa0148080 | Msa1358500 | 0.844774 | 6.136702e-59 | -8.615850e-47 |
| Msa0160960 | Msa1358500 | 0.827480 | 1.528412e-54 | -8.615850e-47 |
| Msa0168310 | Msa1358500 | 0.807874 | 4.084777e-50 | -8.615850e-47 |
| Msa0169280 | Msa1358500 | 0.828764 | 7.498712e-55 | -8.615850e-47 |
| Msa0189040 | Msa1358500 | 0.820870 | 5.457902e-53 | -8.615850e-47 |
| Msa0189320 | Msa1358500 | 0.810059 | 1.391490e-50 | -8.615850e-47 |
| Msa0189710 | Msa1358500 | 0.801264 | 9.773850e-49 | -8.615850e-47 |
| Msa0204960 | Msa1358500 | 0.811956 | 5.402332e-51 | -8.615850e-47 |
| Msa0207040 | Msa1358500 | -0.805810 | 1.115303e-49 | -8.615850e-47 |
| Msa0211150 | Msa1358500 | 0.801782 | 7.655268e-49 | -8.615850e-47 |
| Msa0217700 | Msa1358500 | 0.831853 | 1.318728e-55 | -8.615850e-47 |
| Msa0218370 | Msa1358500 | 0.828286 | 9.784092e-55 | -8.615850e-47 |
| Msa0219590 | Msa1358500 | 0.823230 | 1.548936e-53 | -8.615850e-47 |
| Msa0221470 | Msa1358500 | 0.811813 | 5.801948e-51 | -8.615850e-47 |
| Msa0225110 | Msa1358500 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0225220 | Msa1358500 | 0.812049 | 5.155502e-51 | -8.615850e-47 |
| Msa0231060 | Msa1358500 | 0.863602 | 2.214705e-64 | -8.615850e-47 |
| Msa0232020 | Msa1358500 | 0.819343 | 1.220456e-52 | -8.615850e-47 |
| Msa0232090 | Msa1358500 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0232360 | Msa1358500 | 0.801226 | 9.949428e-49 | -8.615850e-47 |
| Msa1225860 | Msa1358500 | -0.813311 | 2.729850e-51 | -8.615850e-47 |
| Msa1228590 | Msa1358500 | 0.814940 | 1.192527e-51 | -8.615850e-47 |
| Msa1231840 | Msa1358500 | 0.835782 | 1.373267e-56 | -8.615850e-47 |
| Msa1232700 | Msa1358500 | 0.855205 | 7.373763e-62 | -8.615850e-47 |
| Msa1237630 | Msa1358500 | 0.821201 | 4.578424e-53 | -8.615850e-47 |
| Msa1237700 | Msa1358500 | 0.817240 | 3.654265e-52 | -8.615850e-47 |
| Msa1238660 | Msa1358500 | 0.810080 | 1.377171e-50 | -8.615850e-47 |
| Msa1245930 | Msa1358500 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
| Msa1246360 | Msa1358500 | 0.815682 | 8.156482e-52 | -8.615850e-47 |
| Msa1257750 | Msa1358500 | 0.813733 | 2.204156e-51 | -8.615850e-47 |
| Msa1259060 | Msa1358500 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa1274560 | Msa1358500 | 0.805057 | 1.603731e-49 | -8.615850e-47 |
| Msa1275050 | Msa1358500 | 0.817085 | 3.958644e-52 | -8.615850e-47 |
| Msa1280320 | Msa1358500 | 0.809358 | 1.968180e-50 | -8.615850e-47 |
| Msa1305810 | Msa1358500 | 0.823502 | 1.338022e-53 | -8.615850e-47 |
| Msa1307180 | Msa1358500 | 0.808418 | 3.128100e-50 | -8.615850e-47 |
| Msa1307560 | Msa1358500 | 0.825606 | 4.278150e-54 | -8.615850e-47 |
| Msa1308870 | Msa1358500 | 0.840308 | 9.400556e-58 | -8.615850e-47 |
| Msa1312520 | Msa1358500 | 0.804665 | 1.937487e-49 | -8.615850e-47 |
| Msa1313280 | Msa1358500 | 0.817200 | 3.730620e-52 | -8.615850e-47 |
| Msa1316360 | Msa1358500 | 0.808341 | 3.248381e-50 | -8.615850e-47 |
| Msa1319560 | Msa1358500 | 0.831171 | 1.941258e-55 | -8.615850e-47 |
| Msa1325410 | Msa1358500 | -0.816472 | 5.434099e-52 | -8.615850e-47 |
| Msa1329200 | Msa1358500 | 0.804665 | 1.937175e-49 | -8.615850e-47 |
| Msa1331000 | Msa1358500 | 0.822789 | 1.962500e-53 | -8.615850e-47 |
| Msa1331320 | Msa1358500 | 0.842266 | 2.872668e-58 | -8.615850e-47 |
| Msa1336290 | Msa1358500 | 0.809272 | 2.054096e-50 | -8.615850e-47 |
| Msa0367870 | Msa1358500 | 0.824789 | 6.671257e-54 | -8.615850e-47 |
| Msa0383800 | Msa1358500 | 0.825898 | 3.645576e-54 | -8.615850e-47 |
| Msa0398670 | Msa1358500 | 0.835954 | 1.241692e-56 | -8.615850e-47 |
| Msa0412840 | Msa1358500 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0414140 | Msa1358500 | 0.808503 | 2.999678e-50 | -8.615850e-47 |
| Msa0425170 | Msa1358500 | 0.830179 | 3.397738e-55 | -8.615850e-47 |
| Msa0430420 | Msa1358500 | 0.806820 | 6.832735e-50 | -8.615850e-47 |
| Msa0434180 | Msa1358500 | 0.842027 | 3.323086e-58 | -8.615850e-47 |
| Msa0450400 | Msa1358500 | -0.802690 | 4.978172e-49 | -8.615850e-47 |
| Msa0455760 | Msa1358500 | 0.817333 | 3.481334e-52 | -8.615850e-47 |
| Msa0457960 | Msa1358500 | 0.821378 | 4.169440e-53 | -8.615850e-47 |
| Msa0464100 | Msa1358500 | 0.818998 | 1.462434e-52 | -8.615850e-47 |
| Msa0464120 | Msa1358500 | 0.811270 | 7.612770e-51 | -8.615850e-47 |
| Msa0471670 | Msa1358500 | 0.800843 | 1.191522e-48 | -8.615850e-47 |
| Msa0481030 | Msa1358500 | 0.805246 | 1.464166e-49 | -8.615850e-47 |
| Msa0481530 | Msa1358500 | 0.800284 | 1.549020e-48 | -8.615850e-47 |
| Msa0980880 | Msa1358500 | 0.812609 | 3.890416e-51 | -8.615850e-47 |
| Msa0989360 | Msa1358500 | 0.823234 | 1.545793e-53 | -8.615850e-47 |
| Msa1001390 | Msa1358500 | 0.801151 | 1.030773e-48 | -8.615850e-47 |
| Msa1002850 | Msa1358500 | 0.836675 | 8.145023e-57 | -8.615850e-47 |
| Msa1026940 | Msa1358500 | 0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa1034500 | Msa1358500 | 0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa1035480 | Msa1358500 | 0.827475 | 1.533182e-54 | -8.615850e-47 |
| Msa1036610 | Msa1358500 | 0.825567 | 4.369605e-54 | -8.615850e-47 |
| Msa1048220 | Msa1358500 | 0.869763 | 2.425746e-66 | -8.615850e-47 |
| Msa1071320 | Msa1358500 | 0.814088 | 1.841027e-51 | -8.615850e-47 |
| Msa1075650 | Msa1358500 | 0.822017 | 2.965717e-53 | -8.615850e-47 |
| Msa1080640 | Msa1358500 | 0.819828 | 9.459345e-53 | -8.615850e-47 |
| Msa1081790 | Msa1358500 | -0.801847 | 7.421918e-49 | -8.615850e-47 |
| Msa1089320 | Msa1358500 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa1089450 | Msa1358500 | 0.806661 | 7.381995e-50 | -8.615850e-47 |
| Msa1089460 | Msa1358500 | 0.835312 | 1.805348e-56 | -8.615850e-47 |
| Msa1101090 | Msa1358500 | 0.815182 | 1.053760e-51 | -8.615850e-47 |
| Msa1104560 | Msa1358500 | 0.811502 | 6.779956e-51 | -8.615850e-47 |
| Msa0240900 | Msa1358500 | 0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa0240920 | Msa1358500 | 0.807076 | 6.030596e-50 | -8.615850e-47 |
| Msa0241140 | Msa1358500 | 0.856613 | 2.857324e-62 | -8.615850e-47 |
| Msa0257500 | Msa1358500 | 0.808565 | 2.909582e-50 | -8.615850e-47 |
| Msa0257520 | Msa1358500 | 0.805835 | 1.101694e-49 | -8.615850e-47 |
| Msa0261090 | Msa1358500 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa0266200 | Msa1358500 | 0.812885 | 3.384691e-51 | -8.615850e-47 |
| Msa0266350 | Msa1358500 | 0.812683 | 3.746619e-51 | -8.615850e-47 |
| Msa0267370 | Msa1358500 | 0.835757 | 1.393594e-56 | -8.615850e-47 |
| Msa0270580 | Msa1358500 | 0.801684 | 8.018099e-49 | -8.615850e-47 |
| Msa0271510 | Msa1358500 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0278580 | Msa1358500 | 0.842668 | 2.247151e-58 | -8.615850e-47 |
| Msa0279220 | Msa1358500 | 0.806115 | 9.619048e-50 | -8.615850e-47 |
| Msa0279240 | Msa1358500 | 0.829055 | 6.376528e-55 | -8.615850e-47 |
| Msa0280090 | Msa1358500 | 0.804624 | 1.975178e-49 | -8.615850e-47 |
| Msa0281530 | Msa1358500 | 0.801777 | 7.673560e-49 | -8.615850e-47 |
| Msa0287870 | Msa1358500 | 0.828063 | 1.107228e-54 | -8.615850e-47 |
| Msa0296480 | Msa1358500 | 0.816609 | 5.062663e-52 | -8.615850e-47 |
| Msa0305410 | Msa1358500 | 0.856523 | 3.038138e-62 | -8.615850e-47 |
| Msa0309770 | Msa1358500 | 0.822993 | 1.759035e-53 | -8.615850e-47 |
| Msa0310090 | Msa1358500 | 0.802006 | 6.885145e-49 | -8.615850e-47 |
| Msa0314070 | Msa1358500 | 0.804783 | 1.830294e-49 | -8.615850e-47 |
| Msa0315690 | Msa1358500 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0316390 | Msa1358500 | 0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0317960 | Msa1358500 | 0.817472 | 3.239951e-52 | -8.615850e-47 |
| Msa0317970 | Msa1358500 | 0.821660 | 3.588507e-53 | -8.615850e-47 |
| Msa0318680 | Msa1358500 | 0.833293 | 5.795072e-56 | -8.615850e-47 |
| Msa0318980 | Msa1358500 | 0.825170 | 5.424238e-54 | -8.615850e-47 |
| Msa0333970 | Msa1358500 | -0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0342010 | Msa1358500 | 0.808555 | 2.924030e-50 | -8.615850e-47 |
| Msa0342410 | Msa1358500 | 0.806089 | 9.742440e-50 | -8.615850e-47 |
| Msa0357900 | Msa1358500 | 0.809507 | 1.828596e-50 | -8.615850e-47 |
| Msa0363790 | Msa1358500 | 0.829113 | 6.172372e-55 | -8.615850e-47 |
| Msa1109090 | Msa1358500 | 0.818959 | 1.492634e-52 | -8.615850e-47 |
| Msa1109680 | Msa1358500 | 0.823444 | 1.380275e-53 | -8.615850e-47 |
| Msa1111870 | Msa1358500 | 0.822272 | 2.589327e-53 | -8.615850e-47 |
| Msa1122150 | Msa1358500 | 0.807715 | 4.414679e-50 | -8.615850e-47 |
| Msa1137780 | Msa1358500 | 0.812746 | 3.629590e-51 | -8.615850e-47 |
| Msa1144040 | Msa1358500 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa1148980 | Msa1358500 | 0.809334 | 1.992174e-50 | -8.615850e-47 |
| Msa1155170 | Msa1358500 | -0.814234 | 1.709254e-51 | -8.615850e-47 |
| Msa1162780 | Msa1358500 | 0.843875 | 1.070460e-58 | -8.615850e-47 |
| Msa1163090 | Msa1358500 | 0.835619 | 1.509717e-56 | -8.615850e-47 |
| Msa1163730 | Msa1358500 | 0.815629 | 8.380622e-52 | -8.615850e-47 |
| Msa1173340 | Msa1358500 | 0.813860 | 2.066950e-51 | -8.615850e-47 |
| Msa1176720 | Msa1358500 | 0.827021 | 1.968671e-54 | -8.615850e-47 |
| Msa1179070 | Msa1358500 | 0.806774 | 6.986051e-50 | -8.615850e-47 |
| Msa1179630 | Msa1358500 | 0.837228 | 5.883619e-57 | -8.615850e-47 |
| Msa1180500 | Msa1358500 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa1181250 | Msa1358500 | 0.844132 | 9.136507e-59 | -8.615850e-47 |
| Msa1181330 | Msa1358500 | 0.837913 | 3.926757e-57 | -8.615850e-47 |
| Msa1181910 | Msa1358500 | 0.849530 | 3.047827e-60 | -8.615850e-47 |
| Msa1196610 | Msa1358500 | -0.800268 | 1.560951e-48 | -8.615850e-47 |
| Msa1204530 | Msa1358500 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
| Msa1204630 | Msa1358500 | 0.805516 | 1.285591e-49 | -8.615850e-47 |
| Msa1207310 | Msa1358500 | 0.842533 | 2.440629e-58 | -8.615850e-47 |
| Msa1213890 | Msa1358500 | 0.802686 | 4.988010e-49 | -8.615850e-47 |
| Msa1213980 | Msa1358500 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa1218580 | Msa1358500 | 0.803561 | 3.287206e-49 | -8.615850e-47 |
| Msa0484720 | Msa1358500 | 0.802275 | 6.059987e-49 | -8.615850e-47 |
| Msa0510930 | Msa1358500 | 0.811676 | 6.214250e-51 | -8.615850e-47 |
| Msa0518170 | Msa1358500 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa0518380 | Msa1358500 | 0.824200 | 9.181567e-54 | -8.615850e-47 |
| Msa0529890 | Msa1358500 | 0.807464 | 4.990092e-50 | -8.615850e-47 |
| Msa0532980 | Msa1358500 | 0.815901 | 7.288559e-52 | -8.615850e-47 |
| Msa0532990 | Msa1358500 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0535630 | Msa1358500 | 0.819426 | 1.168884e-52 | -8.615850e-47 |
| Msa0562570 | Msa1358500 | 0.807082 | 6.012504e-50 | -8.615850e-47 |
| Msa0567350 | Msa1358500 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
| Msa0568660 | Msa1358500 | 0.847376 | 1.202281e-59 | -8.615850e-47 |
| Msa0574390 | Msa1358500 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
| Msa0583360 | Msa1358500 | -0.812443 | 4.229008e-51 | -8.615850e-47 |
| Msa0585560 | Msa1358500 | 0.811725 | 6.064005e-51 | -8.615850e-47 |
| Msa0844110 | Msa1358500 | 0.831959 | 1.241490e-55 | -8.615850e-47 |
| Msa0846860 | Msa1358500 | 0.828525 | 8.564643e-55 | -8.615850e-47 |
| Msa0857940 | Msa1358500 | 0.816112 | 6.539608e-52 | -8.615850e-47 |
| Msa0858130 | Msa1358500 | 0.830361 | 3.066421e-55 | -8.615850e-47 |
| Msa0861470 | Msa1358500 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0861570 | Msa1358500 | 0.814186 | 1.751360e-51 | -8.615850e-47 |
| Msa0865030 | Msa1358500 | 0.825433 | 4.700354e-54 | -8.615850e-47 |
| Msa0867010 | Msa1358500 | 0.845336 | 4.327298e-59 | -8.615850e-47 |
| Msa0870380 | Msa1358500 | 0.805632 | 1.215712e-49 | -8.615850e-47 |
| Msa0878220 | Msa1358500 | 0.851464 | 8.724619e-61 | -8.615850e-47 |
| Msa0880810 | Msa1358500 | 0.804895 | 1.734418e-49 | -8.615850e-47 |
| Msa0888260 | Msa1358500 | 0.806251 | 9.007814e-50 | -8.615850e-47 |
| Msa0894710 | Msa1358500 | 0.827410 | 1.588736e-54 | -8.615850e-47 |
| Msa0902830 | Msa1358500 | 0.811615 | 6.406053e-51 | -8.615850e-47 |
| Msa0921420 | Msa1358500 | 0.801626 | 8.237975e-49 | -8.615850e-47 |
| Msa0943970 | Msa1358500 | 0.859026 | 5.498955e-63 | -8.615850e-47 |
| Msa0944020 | Msa1358500 | 0.845043 | 5.194610e-59 | -8.615850e-47 |
| Msa0954840 | Msa1358500 | 0.800545 | 1.370571e-48 | -8.615850e-47 |
| Msa0972960 | Msa1358500 | 0.800297 | 1.539777e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358500 | MtrunA17_Chr8g0383571 | 97.273 | 440 | 12 | 0 | 38 | 477 | 2 | 441 | 0.0 | 873 |
| Msa1358500 | MtrunA17_Chr8g0383531 | 96.575 | 438 | 15 | 0 | 40 | 477 | 1 | 438 | 0.0 | 867 |
| Msa1358500 | MtrunA17_Chr5g0431161 | 47.253 | 91 | 48 | 0 | 137 | 227 | 35 | 125 | 1.03e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358500 | AT5G09900.2 | 80.000 | 440 | 87 | 1 | 38 | 476 | 2 | 441 | 0.0 | 711 |
| Msa1358500 | AT5G09900.1 | 80.460 | 435 | 84 | 1 | 43 | 476 | 7 | 441 | 0.0 | 708 |
| Msa1358500 | AT5G64760.2 | 77.045 | 440 | 100 | 1 | 38 | 476 | 2 | 441 | 0.0 | 681 |
| Msa1358500 | AT5G64760.1 | 77.701 | 435 | 96 | 1 | 43 | 476 | 7 | 441 | 0.0 | 680 |
| Msa1358500 | AT5G64760.3 | 78.385 | 421 | 90 | 1 | 57 | 476 | 1 | 421 | 0.0 | 665 |
| Msa1358500 | AT5G09900.3 | 78.698 | 338 | 71 | 1 | 43 | 379 | 7 | 344 | 0.0 | 534 |
Find 116 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATCATAGTTCATGATTT+TGG | 0.116538 | tig0016345:+10662 | Msa1358500:three_prime_UTR |
| TTATCTTTCTTGAGAGTATT+TGG | 0.210165 | tig0016345:-7259 | None:intergenic |
| GACCATATTATCACCTTCTT+TGG | 0.222140 | tig0016345:-7327 | None:intergenic |
| AAACCCGAAGGCCATGAATT+TGG | 0.244287 | tig0016345:+10497 | Msa1358500:three_prime_UTR |
| TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | tig0016345:+9042 | Msa1358500:CDS |
| GTTATTCTTCAATTTCATTA+TGG | 0.255010 | tig0016345:-10471 | None:intergenic |
| TTGAAAAGCAGTTATATTAT+AGG | 0.288845 | tig0016345:-6110 | None:intergenic |
| TTCTCCAAATTCATGGCCTT+CGG | 0.293647 | tig0016345:-10501 | None:intergenic |
| CGTTGCTATCCTTTGCTGTT+TGG | 0.293818 | tig0016345:-10103 | None:intergenic |
| TATCTTTCTTGAGAGTATTT+GGG | 0.303298 | tig0016345:-7258 | None:intergenic |
| CTTAAGCTGGCCGCGTCGTT+TGG | 0.310516 | tig0016345:-6314 | None:intergenic |
| AGGATAACATACTGGAAGTT+TGG | 0.319003 | tig0016345:-9331 | None:intergenic |
| TCATCCAATGGACAGCTCTT+TGG | 0.322854 | tig0016345:+9476 | Msa1358500:CDS |
| AATCATGAACTATGATAAAC+AGG | 0.324450 | tig0016345:-10658 | None:intergenic |
| TCTTATCAGGTGGAAACTTT+TGG | 0.328587 | tig0016345:+7052 | Msa1358500:intron |
| TGAAAAGCAGTTATATTATA+GGG | 0.330017 | tig0016345:-6109 | None:intergenic |
| ATGGACTGAAGTTGCCTTAC+GGG | 0.331235 | tig0016345:+10391 | Msa1358500:three_prime_UTR |
| CATCCAATGGACAGCTCTTT+GGG | 0.333432 | tig0016345:+9477 | Msa1358500:CDS |
| CCCCTGTATTTCCTTTATCT+TGG | 0.342383 | tig0016345:-6881 | None:intergenic |
| ACCATATTATCACCTTCTTT+GGG | 0.346638 | tig0016345:-7326 | None:intergenic |
| CAAGAAACTTGCCAAGATAA+AGG | 0.359795 | tig0016345:+6870 | Msa1358500:CDS |
| GGGCTCCTCAATATGTGATA+TGG | 0.363610 | tig0016345:+10372 | Msa1358500:three_prime_UTR |
| GAGAGTACCGTGGTTTCGTT+TGG | 0.367636 | tig0016345:-6043 | None:intergenic |
| TCTCCAAATTCATGGCCTTC+GGG | 0.391544 | tig0016345:-10500 | None:intergenic |
| ATTCGACATAGATGCATCTA+AGG | 0.393010 | tig0016345:+7292 | Msa1358500:CDS |
| TAACTCGTGGGCAGCAAACT+TGG | 0.397845 | tig0016345:+10133 | Msa1358500:CDS |
| TTCTGATCCCCTTTCTCGAT+CGG | 0.403091 | tig0016345:+6069 | Msa1358500:CDS |
| AGATCAGACGGCGAAATTGC+CGG | 0.404288 | tig0016345:+6205 | Msa1358500:CDS |
| TGCTGATATTCCATCTCTAC+TGG | 0.412149 | tig0016345:+7361 | Msa1358500:CDS |
| GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | tig0016345:+7325 | Msa1358500:CDS |
| TCAATACGAGTTTCAACATC+TGG | 0.427862 | tig0016345:-6669 | None:intergenic |
| TTCAAGATAATCATTGTTGT+GGG | 0.433017 | tig0016345:-9023 | None:intergenic |
| CAATATATTGCATAGCCTGC+TGG | 0.433604 | tig0016345:-6638 | None:intergenic |
| GCATCTATGTCGAATACTCT+TGG | 0.433663 | tig0016345:-7284 | None:intergenic |
| TGCCAAGATAAAGGAAATAC+AGG | 0.434552 | tig0016345:+6879 | Msa1358500:CDS |
| TTTGACAATGAGATGGTCTA+TGG | 0.435499 | tig0016345:+9517 | Msa1358500:CDS |
| GGTTCATAAAGCAGCTTTGA+AGG | 0.436788 | tig0016345:+10211 | Msa1358500:CDS |
| GGACATGATCCTGGCGGTCT+AGG | 0.445916 | tig0016345:-7232 | None:intergenic |
| ACTATTACGAGCTAATGATT+AGG | 0.458857 | tig0016345:+7396 | Msa1358500:CDS |
| TCTGCTTTGAAGCCAAAGCC+TGG | 0.465047 | tig0016345:+6260 | Msa1358500:CDS |
| CACATGCACCGATCGAGAAA+GGG | 0.468426 | tig0016345:-6077 | None:intergenic |
| TTTCAAGATAATCATTGTTG+TGG | 0.472189 | tig0016345:-9024 | None:intergenic |
| AGAGTACCGTGGTTTCGTTT+GGG | 0.481109 | tig0016345:-6042 | None:intergenic |
| TATGGTTGTTACCAAGGCTC+TGG | 0.483429 | tig0016345:+10043 | Msa1358500:CDS |
| ACACATGCACCGATCGAGAA+AGG | 0.484464 | tig0016345:-6078 | None:intergenic |
| GGAGAAGATGCTTGATCTTG+TGG | 0.492893 | tig0016345:+10154 | Msa1358500:CDS |
| CATCTATGTCGAATACTCTT+GGG | 0.496534 | tig0016345:-7283 | None:intergenic |
| CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | tig0016345:-9284 | None:intergenic |
| TTTGGGCACGGACATGATCC+TGG | 0.504121 | tig0016345:-7241 | None:intergenic |
| TATGGACTGAAGTTGCCTTA+CGG | 0.506085 | tig0016345:+10390 | Msa1358500:three_prime_UTR |
| AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | tig0016345:-10054 | None:intergenic |
| GCAAAGATTGACAGACCAAT+GGG | 0.508334 | tig0016345:+10068 | Msa1358500:CDS |
| TCGACTCTGCCTAGACCGCC+AGG | 0.509366 | tig0016345:+7223 | Msa1358500:CDS |
| GTTTGGACAAAACGACAATC+TGG | 0.512141 | tig0016345:-6297 | None:intergenic |
| TGCTTCAACTCCAGTAGAGA+TGG | 0.518855 | tig0016345:-7371 | None:intergenic |
| GCAGCTTTGAAGGTTTAAGA+AGG | 0.527483 | tig0016345:+10221 | Msa1358500:exon |
| TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | tig0016345:-9480 | None:intergenic |
| TGTGACAGCGATGGTCCAGC+AGG | 0.529317 | tig0016345:+6623 | Msa1358500:CDS |
| ACATTGAACAGTGTATCTGC+TGG | 0.532773 | tig0016345:+6702 | Msa1358500:CDS |
| TGAGATTGAGAGAGCAAGGT+TGG | 0.535070 | tig0016345:+6846 | Msa1358500:CDS |
| TTGCATCAAATCAGCAGCCT+CGG | 0.540212 | tig0016345:-6911 | None:intergenic |
| CAAGTGGTACCTGCTTAAGC+TGG | 0.542473 | tig0016345:-6327 | None:intergenic |
| CAAAGCTGCTTTATGAACCA+TGG | 0.543033 | tig0016345:-10207 | None:intergenic |
| AGTAGAGATGGAATATCAGC+AGG | 0.547557 | tig0016345:-7359 | None:intergenic |
| ACGACGCGGCCAGCTTAAGC+AGG | 0.547759 | tig0016345:+6318 | Msa1358500:CDS |
| TGAAATGTTGCTCACTGTGT+TGG | 0.548481 | tig0016345:+10424 | Msa1358500:three_prime_UTR |
| GCATCACCAAGTGACTTGTC+AGG | 0.549622 | tig0016345:-10714 | None:intergenic |
| GAAGCTGAGAAGCATCTGTC+CGG | 0.552717 | tig0016345:+10020 | Msa1358500:CDS |
| CCTACAGGAATAAAATCAGC+AGG | 0.555937 | tig0016345:-9097 | None:intergenic |
| TGGAAACAGACTATTCCCAT+TGG | 0.557174 | tig0016345:-10083 | None:intergenic |
| TGCAAAGATTGACAGACCAA+TGG | 0.572504 | tig0016345:+10067 | Msa1358500:CDS |
| TGAGAAGCATCTGTCCGGTA+TGG | 0.572589 | tig0016345:+10025 | Msa1358500:CDS |
| GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | tig0016345:+9234 | Msa1358500:CDS |
| GTCCGGTATGGTTGTTACCA+AGG | 0.577395 | tig0016345:+10037 | Msa1358500:CDS |
| GCAACGATGTTCTTAACTCG+TGG | 0.578239 | tig0016345:+10120 | Msa1358500:CDS |
| TTCAAATGAGCATCCCCGTA+AGG | 0.584624 | tig0016345:-10405 | None:intergenic |
| ATCAGTCCTGACAAGTCACT+TGG | 0.585955 | tig0016345:+10708 | Msa1358500:three_prime_UTR |
| TTCTTGAGAGTATTTGGGCA+CGG | 0.586277 | tig0016345:-7253 | None:intergenic |
| GCCAAGATAAAGGAAATACA+GGG | 0.586967 | tig0016345:+6880 | Msa1358500:CDS |
| ACGTTGAGATTGAGAGAGCA+AGG | 0.591447 | tig0016345:+6842 | Msa1358500:CDS |
| AAGAATAACATTAAACCCGA+AGG | 0.597208 | tig0016345:+10485 | Msa1358500:three_prime_UTR |
| TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | tig0016345:-9274 | None:intergenic |
| CATTGAACAGTGTATCTGCT+GGG | 0.598121 | tig0016345:+6703 | Msa1358500:CDS |
| AGATCCTGAGGAAAATATGT+TGG | 0.600984 | tig0016345:+9227 | Msa1358500:intron |
| AGATAGATTTCTATCCTCCA+AGG | 0.603704 | tig0016345:-9302 | None:intergenic |
| TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | tig0016345:+9450 | Msa1358500:CDS |
| AGCCTTGGTAACAACCATAC+CGG | 0.606298 | tig0016345:-10039 | None:intergenic |
| CAACGATGTTCTTAACTCGT+GGG | 0.607448 | tig0016345:+10121 | Msa1358500:CDS |
| CATATATTGCCTTATAGCAG+CGG | 0.613022 | tig0016345:-9051 | None:intergenic |
| TCAGTCCATATCACATATTG+AGG | 0.615157 | tig0016345:-10377 | None:intergenic |
| AGGTGATAATATGGTCGAAG+AGG | 0.618539 | tig0016345:+7334 | Msa1358500:CDS |
| GAATGAGTTTGACAATGAGA+TGG | 0.628221 | tig0016345:+9510 | Msa1358500:CDS |
| ACATGCACCGATCGAGAAAG+GGG | 0.628677 | tig0016345:-6076 | None:intergenic |
| TCACCATGGAAGTCATCCAA+TGG | 0.630891 | tig0016345:+9464 | Msa1358500:CDS |
| GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | tig0016345:+6707 | Msa1358500:CDS |
| AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | tig0016345:+10094 | Msa1358500:CDS |
| CTGGACTGCATCGGTGAATG+TGG | 0.634478 | tig0016345:-9265 | None:intergenic |
| GAGTTGCAAGATATCGATTG+CGG | 0.635622 | tig0016345:-6239 | None:intergenic |
| GTTCTTACATACAGATCCTG+AGG | 0.637665 | tig0016345:+9215 | Msa1358500:intron |
| TCAAATACACAAGGAAACCA+TGG | 0.640379 | tig0016345:+10190 | Msa1358500:CDS |
| GAGAAGCAGATGAGATCAGA+CGG | 0.646168 | tig0016345:+6193 | Msa1358500:CDS |
| TGATTTGATGCAAGAAATTG+CGG | 0.655673 | tig0016345:+6921 | Msa1358500:CDS |
| TGGACTGAAGTTGCCTTACG+GGG | 0.655915 | tig0016345:+10392 | Msa1358500:three_prime_UTR |
| TGTTGCTCACTGTGTTGGTG+AGG | 0.668735 | tig0016345:+10429 | Msa1358500:three_prime_UTR |
| CATGCAGGCTGTGACAGCGA+TGG | 0.669127 | tig0016345:+6614 | Msa1358500:intron |
| GAGCTGTCATCAAATACACA+AGG | 0.670564 | tig0016345:+10181 | Msa1358500:CDS |
| TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | tig0016345:-9299 | None:intergenic |
| GTTTATCCCAAACGAAACCA+CGG | 0.688822 | tig0016345:+6036 | Msa1358500:CDS |
| TGTCCATTGGATGACTTCCA+TGG | 0.689019 | tig0016345:-9467 | None:intergenic |
| ATCATGAACTATGATAAACA+GGG | 0.720875 | tig0016345:-10657 | None:intergenic |
| CCAAGATAAAGGAAATACAG+GGG | 0.720940 | tig0016345:+6881 | Msa1358500:CDS |
| GAAAATATTAGCAACCACAG+TGG | 0.730711 | tig0016345:-10601 | None:intergenic |
| AAGTTGAAATAAGAAGCTGA+CGG | 0.731176 | tig0016345:+10555 | Msa1358500:three_prime_UTR |
| GGGCACGGACATGATCCTGG+CGG | 0.747981 | tig0016345:-7238 | None:intergenic |
| ATCAGAAATAGAGAGTACCG+TGG | 0.765081 | tig0016345:-6053 | None:intergenic |
| AGTTTGAAGAGAAGCCACTG+TGG | 0.795391 | tig0016345:+10587 | Msa1358500:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAAATAAAATAAGA+TGG | - | tig0016345:9961-9980 | None:intergenic | 10.0% |
| !!! | ATGCTTATTTTTTTTTTTTT+GGG | + | tig0016345:10733-10752 | Msa1358500:three_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTCGTTTAGAT+TGG | + | tig0016345:6405-6424 | Msa1358500:intron | 15.0% |
| !!! | TTTTAAAATAGATTATGCTA+TGG | - | tig0016345:6777-6796 | None:intergenic | 15.0% |
| !!! | ATATATCTTTTTTTCGTTTT+TGG | + | tig0016345:6978-6997 | Msa1358500:intron | 15.0% |
| !! | GTTTGTATAAAATAAACTAA+AGG | - | tig0016345:7515-7534 | None:intergenic | 15.0% |
| !!! | TTTGGTTTTTATATTCAAAT+AGG | - | tig0016345:7622-7641 | None:intergenic | 15.0% |
| !!! | TAATTAACTGTTTTAATTCT+TGG | + | tig0016345:7963-7982 | Msa1358500:intron | 15.0% |
| !! | TACTATAAGATTATGTTATA+CGG | + | tig0016345:9154-9173 | Msa1358500:intron | 15.0% |
| !!! | ATATTTTAACATGATTAGAA+AGG | - | tig0016345:9373-9392 | None:intergenic | 15.0% |
| !!! | ACTTTAATAACTTTTTCTTA+TGG | + | tig0016345:9797-9816 | Msa1358500:intron | 15.0% |
| !! | ATATTCATAATGCTTATTTA+TGG | + | tig0016345:10339-10358 | Msa1358500:intron | 15.0% |
| !! | CTGATCTTTAAATTTAAAAA+TGG | - | tig0016345:10693-10712 | None:intergenic | 15.0% |
| !!! | GATGCTTATTTTTTTTTTTT+TGG | + | tig0016345:10732-10751 | Msa1358500:three_prime_UTR | 15.0% |
| !! | TGAAAAGCAGTTATATTATA+GGG | - | tig0016345:6112-6131 | None:intergenic | 20.0% |
| !! | TTGAAAAGCAGTTATATTAT+AGG | - | tig0016345:6113-6132 | None:intergenic | 20.0% |
| !!! | CTAAAATCTTTTAAACCTAA+CGG | - | tig0016345:6383-6402 | None:intergenic | 20.0% |
| !! | AATTGTTTGCTTAAAATGAT+TGG | + | tig0016345:6429-6448 | Msa1358500:intron | 20.0% |
| !!! | TTAAAATGATTGGTTTGTTT+AGG | + | tig0016345:6439-6458 | Msa1358500:intron | 20.0% |
| !!! | TAAAATGATTGGTTTGTTTA+GGG | + | tig0016345:6440-6459 | Msa1358500:intron | 20.0% |
| !! | GATTAGTACAAATTATTGTT+TGG | + | tig0016345:7009-7028 | Msa1358500:intron | 20.0% |
| !! | AAACTAAAATATAGAAAACC+AGG | - | tig0016345:7566-7585 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCATTAACTTTTG+AGG | + | tig0016345:7578-7597 | Msa1358500:intron | 20.0% |
| !!! | GATTCTAAAATTAACAGTAT+AGG | - | tig0016345:7662-7681 | None:intergenic | 20.0% |
| !!! | ATTTTAGAATCTGAAAGATA+AGG | + | tig0016345:7671-7690 | Msa1358500:intron | 20.0% |
| !! | ACAGTTAATTAAAAACTTGT+TGG | - | tig0016345:7954-7973 | None:intergenic | 20.0% |
| !! | CAATTTGATATTTAGTAACA+AGG | - | tig0016345:8035-8054 | None:intergenic | 20.0% |
| !!! | TATTTATGGATTATTAGAGT+GGG | + | tig0016345:8121-8140 | Msa1358500:intron | 20.0% |
| !! | TTTCAAAATAGTTAAGAACT+GGG | - | tig0016345:8355-8374 | None:intergenic | 20.0% |
| !! | CTCGTTTATAAAATTCTAAA+TGG | - | tig0016345:8447-8466 | None:intergenic | 20.0% |
| !!! | CATTTAGAATTTTATAAACG+AGG | + | tig0016345:8445-8464 | Msa1358500:intron | 20.0% |
| !!! | ATTTTTTAGAACAGTATCAA+TGG | - | tig0016345:8594-8613 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTGTAAGGAATT+CGG | - | tig0016345:9606-9625 | None:intergenic | 20.0% |
| !!! | GAAACATAAAAAAAAGTGTA+AGG | - | tig0016345:9613-9632 | None:intergenic | 20.0% |
| !!! | AATAACTTTTTCTTATGGTT+TGG | + | tig0016345:9802-9821 | Msa1358500:intron | 20.0% |
| !!! | ATAACTTTTTCTTATGGTTT+GGG | + | tig0016345:9803-9822 | Msa1358500:intron | 20.0% |
| !! | TTAAAGAAAAACTATATCCT+TGG | + | tig0016345:9836-9855 | Msa1358500:intron | 20.0% |
| !! | GTTATTCTTCAATTTCATTA+TGG | - | tig0016345:10474-10493 | None:intergenic | 20.0% |
| !!! | TTTATCATAGTTCATGATTT+TGG | + | tig0016345:10662-10681 | Msa1358500:three_prime_UTR | 20.0% |
| !!! | TTATCATAGTTCATGATTTT+GGG | + | tig0016345:10663-10682 | Msa1358500:three_prime_UTR | 20.0% |
| !! | CGTTAGGTTTAAAAGATTTT+AGG | + | tig0016345:6381-6400 | Msa1358500:intron | 25.0% |
| !!! | GTTAGCTTTAAACTCTAAAA+TGG | + | tig0016345:6468-6487 | Msa1358500:intron | 25.0% |
| ! | TTTGTATGATTGGTACAAAA+AGG | + | tig0016345:6566-6585 | Msa1358500:intron | 25.0% |
| ! | TCTTCTATGTTAAATTGTGT+AGG | + | tig0016345:7199-7218 | Msa1358500:intron | 25.0% |
| !!! | TATCTTTCTTGAGAGTATTT+GGG | - | tig0016345:7261-7280 | None:intergenic | 25.0% |
| !!! | TTATCTTTCTTGAGAGTATT+TGG | - | tig0016345:7262-7281 | None:intergenic | 25.0% |
| ! | AAGAAATACTACAACTAAAC+AGG | - | tig0016345:7439-7458 | None:intergenic | 25.0% |
| !! | CTCCTTTTTATCTATATCTA+CGG | + | tig0016345:7843-7862 | Msa1358500:intron | 25.0% |
| !! | TCCTTTTTATCTATATCTAC+GGG | + | tig0016345:7844-7863 | Msa1358500:intron | 25.0% |
| !! | TTTTCTATATTACGTAAGTG+CGG | + | tig0016345:7896-7915 | Msa1358500:intron | 25.0% |
| !!! | TGTTTTAATTCTTGGTTTGA+TGG | + | tig0016345:7971-7990 | Msa1358500:intron | 25.0% |
| !! | GTATTTATGGATTATTAGAG+TGG | + | tig0016345:8120-8139 | Msa1358500:intron | 25.0% |
| ! | AGAAGTAAGTGATTAAAATG+TGG | - | tig0016345:8268-8287 | None:intergenic | 25.0% |
| !! | AACTTTGGAAATTTAGGAAT+CGG | - | tig0016345:8293-8312 | None:intergenic | 25.0% |
| !! | ATGGATAACTTTGGAAATTT+AGG | - | tig0016345:8299-8318 | None:intergenic | 25.0% |
| ! | AATGAAAAGTAGAGATGAAA+TGG | - | tig0016345:8318-8337 | None:intergenic | 25.0% |
| ! | GTTTCAAAATAGTTAAGAAC+TGG | - | tig0016345:8356-8375 | None:intergenic | 25.0% |
| !! | AAGTTCAAACTCGTTTTATA+TGG | - | tig0016345:8513-8532 | None:intergenic | 25.0% |
| ! | AGTAATGTAGAGTAAAGAAT+TGG | + | tig0016345:8777-8796 | Msa1358500:intron | 25.0% |
| ! | CATAAGGAAAAAAAAAGTCA+GGG | - | tig0016345:8971-8990 | None:intergenic | 25.0% |
| ! | TTCAAGATAATCATTGTTGT+GGG | - | tig0016345:9026-9045 | None:intergenic | 25.0% |
| ! | TTTCAAGATAATCATTGTTG+TGG | - | tig0016345:9027-9046 | None:intergenic | 25.0% |
| ! | CTGTATGTAAGAACAATATT+CGG | - | tig0016345:9209-9228 | None:intergenic | 25.0% |
| ! | TGAAAAATAGGATAACATAC+TGG | - | tig0016345:9342-9361 | None:intergenic | 25.0% |
| ! | AAGGATGAAAGATGAAAAAT+AGG | - | tig0016345:9354-9373 | None:intergenic | 25.0% |
| ! | TACAACAAGAATATTCTGAA+AGG | - | tig0016345:9676-9695 | None:intergenic | 25.0% |
| ! | TTATGCACGAGTAATTAATT+AGG | - | tig0016345:9995-10014 | None:intergenic | 25.0% |
| ! | ATCATGAACTATGATAAACA+GGG | - | tig0016345:10660-10679 | None:intergenic | 25.0% |
| ! | AATCATGAACTATGATAAAC+AGG | - | tig0016345:10661-10680 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGGGTGTGAAT+TGG | + | tig0016345:10743-10762 | Msa1358500:three_prime_UTR | 25.0% |
| !! | CTTTTTCGTGTTAGGAATTA+GGG | + | tig0016345:6354-6373 | Msa1358500:intron | 30.0% |
| !! | GCTTTAAACTCTAAAATGGT+TGG | + | tig0016345:6472-6491 | Msa1358500:intron | 30.0% |
| !!! | CTGCATCTTTTTTGTATGAT+TGG | + | tig0016345:6556-6575 | Msa1358500:intron | 30.0% |
| GCTATTATATATATGCATGC+AGG | + | tig0016345:6599-6618 | Msa1358500:intron | 30.0% | |
| GAGAAGATGATAAAACAGTA+TGG | - | tig0016345:6755-6774 | None:intergenic | 30.0% | |
| TGATTTGATGCAAGAAATTG+CGG | + | tig0016345:6921-6940 | Msa1358500:CDS | 30.0% | |
| ! | TGTTTGGTTTACTTATGTGA+TGG | + | tig0016345:7025-7044 | Msa1358500:intron | 30.0% |
| ! | GTTTGGTTTACTTATGTGAT+GGG | + | tig0016345:7026-7045 | Msa1358500:intron | 30.0% |
| ! | AATTTTCTCAGTTTTTGCCA+TGG | - | tig0016345:7080-7099 | None:intergenic | 30.0% |
| ACCATATTATCACCTTCTTT+GGG | - | tig0016345:7329-7348 | None:intergenic | 30.0% | |
| ACTATTACGAGCTAATGATT+AGG | + | tig0016345:7396-7415 | Msa1358500:CDS | 30.0% | |
| GTAGATACTCTAAATTATCC+TGG | + | tig0016345:7545-7564 | Msa1358500:intron | 30.0% | |
| CGTAGATATAGATAAAAAGG+AGG | - | tig0016345:7845-7864 | None:intergenic | 30.0% | |
| TCCCGTAGATATAGATAAAA+AGG | - | tig0016345:7848-7867 | None:intergenic | 30.0% | |
| !! | CTATGATTTGTTTCTATGCT+TGG | + | tig0016345:7868-7887 | Msa1358500:intron | 30.0% |
| ! | GCTAACTTGTACTGTATTTA+TGG | + | tig0016345:8107-8126 | Msa1358500:intron | 30.0% |
| AGAGATGAAATGGATAACTT+TGG | - | tig0016345:8308-8327 | None:intergenic | 30.0% | |
| !! | GAACTTTAGAATAAACTTGC+TGG | + | tig0016345:8527-8546 | Msa1358500:intron | 30.0% |
| !! | TAGAATAAACTTGCTGGATT+TGG | + | tig0016345:8533-8552 | Msa1358500:intron | 30.0% |
| AGTATCAATGGTAAAAGACA+AGG | - | tig0016345:8582-8601 | None:intergenic | 30.0% | |
| AGCAGCATAAATATAAACGA+CGG | - | tig0016345:8697-8716 | None:intergenic | 30.0% | |
| AGTCCTGTTTATTTGTGTTT+GGG | + | tig0016345:8726-8745 | Msa1358500:intron | 30.0% | |
| !! | CTACATATTTTTCTAGTACC+TGG | + | tig0016345:8922-8941 | Msa1358500:intron | 30.0% |
| AGTAAGAAATATCATGAACC+AGG | - | tig0016345:8943-8962 | None:intergenic | 30.0% | |
| GCATAAGGAAAAAAAAAGTC+AGG | - | tig0016345:8972-8991 | None:intergenic | 30.0% | |
| !!! | GACTTTTTTTTTCCTTATGC+TGG | + | tig0016345:8972-8991 | Msa1358500:intron | 30.0% |
| ! | TGTTTAGAATTCCTTGTCAT+TGG | + | tig0016345:9395-9414 | Msa1358500:intron | 30.0% |
| ! | GTTTAGAATTCCTTGTCATT+GGG | + | tig0016345:9396-9415 | Msa1358500:intron | 30.0% |
| TAACAGAACAAAACCATAAC+TGG | - | tig0016345:9772-9791 | None:intergenic | 30.0% | |
| AAATAAGATGGAAGACCAAT+AGG | - | tig0016345:9949-9968 | None:intergenic | 30.0% | |
| TAATTACTCGTGCATAATTC+AGG | + | tig0016345:9998-10017 | Msa1358500:intron | 30.0% | |
| ! | GTTTAGAGAGATTTTCTCAA+TGG | + | tig0016345:10288-10307 | Msa1358500:intron | 30.0% |
| TGCTTATTTATGGTCATTTC+AGG | + | tig0016345:10349-10368 | Msa1358500:intron | 30.0% | |
| GCTTATTTATGGTCATTTCA+GGG | + | tig0016345:10350-10369 | Msa1358500:intron | 30.0% | |
| CTTATTTATGGTCATTTCAG+GGG | + | tig0016345:10351-10370 | Msa1358500:intron | 30.0% | |
| TTATTTATGGTCATTTCAGG+GGG | + | tig0016345:10352-10371 | Msa1358500:intron | 30.0% | |
| AAGAATAACATTAAACCCGA+AGG | + | tig0016345:10485-10504 | Msa1358500:three_prime_UTR | 30.0% | |
| !!! | CTTTTAGTTCTCCAAATTCA+TGG | - | tig0016345:10511-10530 | None:intergenic | 30.0% |
| AAGTTGAAATAAGAAGCTGA+CGG | + | tig0016345:10555-10574 | Msa1358500:three_prime_UTR | 30.0% | |
| ! | TGCTTTTCAATTCGTTTTGC+AGG | + | tig0016345:6123-6142 | Msa1358500:CDS | 35.0% |
| CCTAATTCCTAACACGAAAA+AGG | - | tig0016345:6356-6375 | None:intergenic | 35.0% | |
| !! | CCTTTTTCGTGTTAGGAATT+AGG | + | tig0016345:6353-6372 | Msa1358500:intron | 35.0% |
| !! | GGTACAAAAAGGTATTAACG+AGG | + | tig0016345:6577-6596 | Msa1358500:intron | 35.0% |
| TCAATACGAGTTTCAACATC+TGG | - | tig0016345:6672-6691 | None:intergenic | 35.0% | |
| CAAGAAACTTGCCAAGATAA+AGG | + | tig0016345:6870-6889 | Msa1358500:CDS | 35.0% | |
| TGCCAAGATAAAGGAAATAC+AGG | + | tig0016345:6879-6898 | Msa1358500:CDS | 35.0% | |
| GCCAAGATAAAGGAAATACA+GGG | + | tig0016345:6880-6899 | Msa1358500:CDS | 35.0% | |
| CCAAGATAAAGGAAATACAG+GGG | + | tig0016345:6881-6900 | Msa1358500:CDS | 35.0% | |
| !! | ATGTGATGGGTAATCTTATC+AGG | + | tig0016345:7039-7058 | Msa1358500:intron | 35.0% |
| ! | TCTTATCAGGTGGAAACTTT+TGG | + | tig0016345:7052-7071 | Msa1358500:intron | 35.0% |
| CATCTATGTCGAATACTCTT+GGG | - | tig0016345:7286-7305 | None:intergenic | 35.0% | |
| ATTCGACATAGATGCATCTA+AGG | + | tig0016345:7292-7311 | Msa1358500:CDS | 35.0% | |
| GAAAAGAAAAAGCCCAAAGA+AGG | + | tig0016345:7314-7333 | Msa1358500:CDS | 35.0% | |
| GACCATATTATCACCTTCTT+TGG | - | tig0016345:7330-7349 | None:intergenic | 35.0% | |
| CAAAATACAAAGTCAAGCCA+CGG | - | tig0016345:7488-7507 | None:intergenic | 35.0% | |
| GACATTCATGCATCATTGTT+TGG | - | tig0016345:7640-7659 | None:intergenic | 35.0% | |
| TAAAATTGCAGTCAGACAGA+CGG | - | tig0016345:7711-7730 | None:intergenic | 35.0% | |
| TATATTACGTAAGTGCGGAT+TGG | + | tig0016345:7901-7920 | Msa1358500:intron | 35.0% | |
| CCTAAGAAACTTGGATTGTT+AGG | - | tig0016345:8085-8104 | None:intergenic | 35.0% | |
| CCTAACAATCCAAGTTTCTT+AGG | + | tig0016345:8082-8101 | Msa1358500:intron | 35.0% | |
| AGTTAGCTACCTAAGAAACT+TGG | - | tig0016345:8094-8113 | None:intergenic | 35.0% | |
| ! | TTATGGATTATTAGAGTGGG+AGG | + | tig0016345:8124-8143 | Msa1358500:intron | 35.0% |
| TGGTTATCCTTCCTAACATT+TGG | + | tig0016345:8553-8572 | Msa1358500:intron | 35.0% | |
| AAGGAATCCAAATGTTAGGA+AGG | - | tig0016345:8563-8582 | None:intergenic | 35.0% | |
| AGACAAGGAATCCAAATGTT+AGG | - | tig0016345:8567-8586 | None:intergenic | 35.0% | |
| !! | AAACGACGGTTGATAAGAAT+TGG | - | tig0016345:8683-8702 | None:intergenic | 35.0% |
| GAGTCCTGTTTATTTGTGTT+TGG | + | tig0016345:8725-8744 | Msa1358500:intron | 35.0% | |
| CATCCCAAACACAAATAAAC+AGG | - | tig0016345:8732-8751 | None:intergenic | 35.0% | |
| ACCCAAGTTTAGAAAGCTAT+GGG | - | tig0016345:8833-8852 | None:intergenic | 35.0% | |
| AACCCAAGTTTAGAAAGCTA+TGG | - | tig0016345:8834-8853 | None:intergenic | 35.0% | |
| ! | GGTTTTCTGTCTGTGATTTT+AGG | + | tig0016345:8993-9012 | Msa1358500:intron | 35.0% |
| CATATATTGCCTTATAGCAG+CGG | - | tig0016345:9054-9073 | None:intergenic | 35.0% | |
| ! | ATCAGCAGGATTTTCTTTGA+TGG | - | tig0016345:9086-9105 | None:intergenic | 35.0% |
| AAAGAGAATAGAAAGCCTAC+AGG | - | tig0016345:9115-9134 | None:intergenic | 35.0% | |
| AGATCCTGAGGAAAATATGT+TGG | + | tig0016345:9227-9246 | Msa1358500:intron | 35.0% | |
| TTTAAAAGACTGGACTGCAT+CGG | - | tig0016345:9277-9296 | None:intergenic | 35.0% | |
| CAAGGTGGAATTTAAAAGAC+TGG | - | tig0016345:9287-9306 | None:intergenic | 35.0% | |
| ! | CAGTCTTTTAAATTCCACCT+TGG | + | tig0016345:9285-9304 | Msa1358500:CDS | 35.0% |
| ! | TCTTTTAAATTCCACCTTGG+AGG | + | tig0016345:9288-9307 | Msa1358500:CDS | 35.0% |
| AGATAGATTTCTATCCTCCA+AGG | - | tig0016345:9305-9324 | None:intergenic | 35.0% | |
| AGGATAACATACTGGAAGTT+TGG | - | tig0016345:9334-9353 | None:intergenic | 35.0% | |
| GAATGAGTTTGACAATGAGA+TGG | + | tig0016345:9510-9529 | Msa1358500:CDS | 35.0% | |
| TTTGACAATGAGATGGTCTA+TGG | + | tig0016345:9517-9536 | Msa1358500:CDS | 35.0% | |
| ACTATATCCTTGGAAAGTGA+AGG | + | tig0016345:9846-9865 | Msa1358500:intron | 35.0% | |
| ! | CAACAACTATTTTCACATGC+AGG | - | tig0016345:9912-9931 | None:intergenic | 35.0% |
| GTAAACCTGTAACTACCTAT+TGG | + | tig0016345:9931-9950 | Msa1358500:intron | 35.0% | |
| TCAAATACACAAGGAAACCA+TGG | + | tig0016345:10190-10209 | Msa1358500:CDS | 35.0% | |
| ! | CTTTGAAGGTTTAAGAAGGT+AGG | + | tig0016345:10225-10244 | Msa1358500:intron | 35.0% |
| TCAGTCCATATCACATATTG+AGG | - | tig0016345:10380-10399 | None:intergenic | 35.0% | |
| GAAAATATTAGCAACCACAG+TGG | - | tig0016345:10604-10623 | None:intergenic | 35.0% | |
| GTTTATCCCAAACGAAACCA+CGG | + | tig0016345:6036-6055 | Msa1358500:CDS | 40.0% | |
| !! | ATCAGAAATAGAGAGTACCG+TGG | - | tig0016345:6056-6075 | None:intergenic | 40.0% |
| ! | ATTCGTTTTGCAGGCAAACA+TGG | + | tig0016345:6132-6151 | Msa1358500:CDS | 40.0% |
| ! | GAGTTGCAAGATATCGATTG+CGG | - | tig0016345:6242-6261 | None:intergenic | 40.0% |
| ! | ATTTAGCGTTTTCCAGGCTT+TGG | - | tig0016345:6275-6294 | None:intergenic | 40.0% |
| GTTTGGACAAAACGACAATC+TGG | - | tig0016345:6300-6319 | None:intergenic | 40.0% | |
| !! | AACACGAAAAAGGCATCAAG+TGG | - | tig0016345:6346-6365 | None:intergenic | 40.0% |
| !! | CTTGATGCCTTTTTCGTGTT+AGG | + | tig0016345:6346-6365 | Msa1358500:intron | 40.0% |
| TAGGAATTAGGGTTTCCGTT+AGG | + | tig0016345:6365-6384 | Msa1358500:intron | 40.0% | |
| ! | TCTAAAATGGTTGGTGCAGT+TGG | + | tig0016345:6481-6500 | Msa1358500:intron | 40.0% |
| CAATATATTGCATAGCCTGC+TGG | - | tig0016345:6641-6660 | None:intergenic | 40.0% | |
| ACATTGAACAGTGTATCTGC+TGG | + | tig0016345:6702-6721 | Msa1358500:CDS | 40.0% | |
| CATTGAACAGTGTATCTGCT+GGG | + | tig0016345:6703-6722 | Msa1358500:CDS | 40.0% | |
| CCCCTGTATTTCCTTTATCT+TGG | - | tig0016345:6884-6903 | None:intergenic | 40.0% | |
| ! | TGATGGGTAATCTTATCAGG+TGG | + | tig0016345:7042-7061 | Msa1358500:intron | 40.0% |
| !! | TTCTTGAGAGTATTTGGGCA+CGG | - | tig0016345:7256-7275 | None:intergenic | 40.0% |
| GCATCTATGTCGAATACTCT+TGG | - | tig0016345:7287-7306 | None:intergenic | 40.0% | |
| GCCCAAAGAAGGTGATAATA+TGG | + | tig0016345:7325-7344 | Msa1358500:CDS | 40.0% | |
| AGGTGATAATATGGTCGAAG+AGG | + | tig0016345:7334-7353 | Msa1358500:CDS | 40.0% | |
| AGTAGAGATGGAATATCAGC+AGG | - | tig0016345:7362-7381 | None:intergenic | 40.0% | |
| TGCTGATATTCCATCTCTAC+TGG | + | tig0016345:7361-7380 | Msa1358500:CDS | 40.0% | |
| ! | ACTAGTAGTTACAAGTACCG+TGG | + | tig0016345:7468-7487 | Msa1358500:intron | 40.0% |
| ! | CGTGGCTTGACTTTGTATTT+TGG | + | tig0016345:7486-7505 | Msa1358500:intron | 40.0% |
| ! | TGAGGATATGCTTTTGATGC+TGG | + | tig0016345:7596-7615 | Msa1358500:intron | 40.0% |
| AATTTGAGCAAACGCAAGCA+AGG | - | tig0016345:7775-7794 | None:intergenic | 40.0% | |
| ! | GCACTGTGATTGGACATTTT+TGG | + | tig0016345:8210-8229 | Msa1358500:intron | 40.0% |
| GAGTAAAGAATTGGTCACAG+TGG | + | tig0016345:8786-8805 | Msa1358500:intron | 40.0% | |
| TCCCCATAGCTTTCTAAACT+TGG | + | tig0016345:8828-8847 | Msa1358500:intron | 40.0% | |
| CCCAAGTTTAGAAAGCTATG+GGG | - | tig0016345:8832-8851 | None:intergenic | 40.0% | |
| CCCCATAGCTTTCTAAACTT+GGG | + | tig0016345:8829-8848 | Msa1358500:intron | 40.0% | |
| ACAGACAGAAAACCAGCATA+AGG | - | tig0016345:8987-9006 | None:intergenic | 40.0% | |
| TGAAATTTGCCGCTGCTATA+AGG | + | tig0016345:9042-9061 | Msa1358500:CDS | 40.0% | |
| ! | GCAGGATTTTCTTTGATGGA+CGG | - | tig0016345:9082-9101 | None:intergenic | 40.0% |
| CCTACAGGAATAAAATCAGC+AGG | - | tig0016345:9100-9119 | None:intergenic | 40.0% | |
| !!! | CCTGCTGATTTTATTCCTGT+AGG | + | tig0016345:9097-9116 | Msa1358500:intron | 40.0% |
| GTTCTTACATACAGATCCTG+AGG | + | tig0016345:9215-9234 | Msa1358500:intron | 40.0% | |
| ! | AGCACCAACATATTTTCCTC+AGG | - | tig0016345:9234-9253 | None:intergenic | 40.0% |
| ! | GAGGAAAATATGTTGGTGCT+TGG | + | tig0016345:9234-9253 | Msa1358500:CDS | 40.0% |
| TAGATTTCTATCCTCCAAGG+TGG | - | tig0016345:9302-9321 | None:intergenic | 40.0% | |
| GCCTGTTATATGTTGTGTCT+AGG | + | tig0016345:9422-9441 | Msa1358500:intron | 40.0% | |
| GCCTAGACACAACATATAAC+AGG | - | tig0016345:9426-9445 | None:intergenic | 40.0% | |
| CTTGGAAAGTGAAGGTAGTA+GGG | + | tig0016345:9854-9873 | Msa1358500:intron | 40.0% | |
| TTGGAAAGTGAAGGTAGTAG+GGG | + | tig0016345:9855-9874 | Msa1358500:intron | 40.0% | |
| GAAGACCAATAGGTAGTTAC+AGG | - | tig0016345:9939-9958 | None:intergenic | 40.0% | |
| TGCAAAGATTGACAGACCAA+TGG | + | tig0016345:10067-10086 | Msa1358500:CDS | 40.0% | |
| GCAAAGATTGACAGACCAAT+GGG | + | tig0016345:10068-10087 | Msa1358500:CDS | 40.0% | |
| TGGAAACAGACTATTCCCAT+TGG | - | tig0016345:10086-10105 | None:intergenic | 40.0% | |
| AGTCTGTTTCCAAACAGCAA+AGG | + | tig0016345:10094-10113 | Msa1358500:CDS | 40.0% | |
| CAACGATGTTCTTAACTCGT+GGG | + | tig0016345:10121-10140 | Msa1358500:CDS | 40.0% | |
| GAGCTGTCATCAAATACACA+AGG | + | tig0016345:10181-10200 | Msa1358500:CDS | 40.0% | |
| ! | CAAAGCTGCTTTATGAACCA+TGG | - | tig0016345:10210-10229 | None:intergenic | 40.0% |
| ! | GGTTCATAAAGCAGCTTTGA+AGG | + | tig0016345:10211-10230 | Msa1358500:CDS | 40.0% |
| !! | GCAGCTTTGAAGGTTTAAGA+AGG | + | tig0016345:10221-10240 | Msa1358500:exon | 40.0% |
| AAGAAGGTAGGTCCATATGT+CGG | + | tig0016345:10237-10256 | Msa1358500:intron | 40.0% | |
| TTGAGAAAAGAGCCGACATA+TGG | - | tig0016345:10252-10271 | None:intergenic | 40.0% | |
| ! | TATGGACTGAAGTTGCCTTA+CGG | + | tig0016345:10390-10409 | Msa1358500:three_prime_UTR | 40.0% |
| TGAAATGTTGCTCACTGTGT+TGG | + | tig0016345:10424-10443 | Msa1358500:three_prime_UTR | 40.0% | |
| TTCTCCAAATTCATGGCCTT+CGG | - | tig0016345:10504-10523 | None:intergenic | 40.0% | |
| !! | AGAGTACCGTGGTTTCGTTT+GGG | - | tig0016345:6045-6064 | None:intergenic | 45.0% |
| TTCTGATCCCCTTTCTCGAT+CGG | + | tig0016345:6069-6088 | Msa1358500:CDS | 45.0% | |
| GAGAAGCAGATGAGATCAGA+CGG | + | tig0016345:6193-6212 | Msa1358500:CDS | 45.0% | |
| ! | CTGGTCATTTAGCGTTTTCC+AGG | - | tig0016345:6281-6300 | None:intergenic | 45.0% |
| ! | TGGACAGAGTCTAGGGTTTA+AGG | + | tig0016345:6501-6520 | Msa1358500:intron | 45.0% |
| ACGTTGAGATTGAGAGAGCA+AGG | + | tig0016345:6842-6861 | Msa1358500:CDS | 45.0% | |
| TGAGATTGAGAGAGCAAGGT+TGG | + | tig0016345:6846-6865 | Msa1358500:CDS | 45.0% | |
| TTGCATCAAATCAGCAGCCT+CGG | - | tig0016345:6914-6933 | None:intergenic | 45.0% | |
| TGCTTCAACTCCAGTAGAGA+TGG | - | tig0016345:7374-7393 | None:intergenic | 45.0% | |
| ! | CGGATTGGAGTACATGTTTG+TGG | + | tig0016345:7916-7935 | Msa1358500:intron | 45.0% |
| TGGATTATTAGAGTGGGAGG+TGG | + | tig0016345:8127-8146 | Msa1358500:intron | 45.0% | |
| TGGTCACAGTGGAGTATATG+TGG | + | tig0016345:8797-8816 | Msa1358500:intron | 45.0% | |
| CGATTTCACAGTCAGTGAAG+TGG | - | tig0016345:8869-8888 | None:intergenic | 45.0% | |
| !!! | TAGGCTACTTTTGAAGCAGC+TGG | + | tig0016345:9441-9460 | Msa1358500:intron | 45.0% |
| TCACCATGGAAGTCATCCAA+TGG | + | tig0016345:9464-9483 | Msa1358500:CDS | 45.0% | |
| TGTCCATTGGATGACTTCCA+TGG | - | tig0016345:9470-9489 | None:intergenic | 45.0% | |
| TCATCCAATGGACAGCTCTT+TGG | + | tig0016345:9476-9495 | Msa1358500:CDS | 45.0% | |
| CATCCAATGGACAGCTCTTT+GGG | + | tig0016345:9477-9496 | Msa1358500:CDS | 45.0% | |
| AACTGGCATTACACACCTCT+AGG | - | tig0016345:9755-9774 | None:intergenic | 45.0% | |
| GAGGTGTGTAATGCCAGTTA+TGG | + | tig0016345:9756-9775 | Msa1358500:intron | 45.0% | |
| CCTACTACCTTCACTTTCCA+AGG | - | tig0016345:9856-9875 | None:intergenic | 45.0% | |
| CCTTGGAAAGTGAAGGTAGT+AGG | + | tig0016345:9853-9872 | Msa1358500:intron | 45.0% | |
| TGAAGGTAGTAGGGGAATTG+TGG | + | tig0016345:9863-9882 | Msa1358500:intron | 45.0% | |
| ! | AGCCTTGGTAACAACCATAC+CGG | - | tig0016345:10042-10061 | None:intergenic | 45.0% |
| TATGGTTGTTACCAAGGCTC+TGG | + | tig0016345:10043-10062 | Msa1358500:CDS | 45.0% | |
| AATCTTTGCAACCAGAGCCT+TGG | - | tig0016345:10057-10076 | None:intergenic | 45.0% | |
| !! | CGTTGCTATCCTTTGCTGTT+TGG | - | tig0016345:10106-10125 | None:intergenic | 45.0% |
| GCAACGATGTTCTTAACTCG+TGG | + | tig0016345:10120-10139 | Msa1358500:CDS | 45.0% | |
| GGAGAAGATGCTTGATCTTG+TGG | + | tig0016345:10154-10173 | Msa1358500:CDS | 45.0% | |
| GGGCTCCTCAATATGTGATA+TGG | + | tig0016345:10372-10391 | Msa1358500:three_prime_UTR | 45.0% | |
| ! | ATGGACTGAAGTTGCCTTAC+GGG | + | tig0016345:10391-10410 | Msa1358500:three_prime_UTR | 45.0% |
| TTCAAATGAGCATCCCCGTA+AGG | - | tig0016345:10408-10427 | None:intergenic | 45.0% | |
| AAACCCGAAGGCCATGAATT+TGG | + | tig0016345:10497-10516 | Msa1358500:three_prime_UTR | 45.0% | |
| TCTCCAAATTCATGGCCTTC+GGG | - | tig0016345:10503-10522 | None:intergenic | 45.0% | |
| AGTTTGAAGAGAAGCCACTG+TGG | + | tig0016345:10587-10606 | Msa1358500:three_prime_UTR | 45.0% | |
| ATCAGTCCTGACAAGTCACT+TGG | + | tig0016345:10708-10727 | Msa1358500:three_prime_UTR | 45.0% | |
| !!! | TTATTTTATTTGTTTTTTAA+TGG | + | tig0016345:9963-9982 | Msa1358500:intron | 5.0% |
| !!! | TATTTTATTTGTTTTTTAAT+GGG | + | tig0016345:9964-9983 | Msa1358500:intron | 5.0% |
| !! | GAGAGTACCGTGGTTTCGTT+TGG | - | tig0016345:6046-6065 | None:intergenic | 50.0% |
| ! | ACATGCACCGATCGAGAAAG+GGG | - | tig0016345:6079-6098 | None:intergenic | 50.0% |
| ! | CACATGCACCGATCGAGAAA+GGG | - | tig0016345:6080-6099 | None:intergenic | 50.0% |
| ! | ACACATGCACCGATCGAGAA+AGG | - | tig0016345:6081-6100 | None:intergenic | 50.0% |
| AGATCAGACGGCGAAATTGC+CGG | + | tig0016345:6205-6224 | Msa1358500:CDS | 50.0% | |
| ! | GATTGCGGCTTTTCTTGTGC+CGG | - | tig0016345:6227-6246 | None:intergenic | 50.0% |
| !! | TCTGCTTTGAAGCCAAAGCC+TGG | + | tig0016345:6260-6279 | Msa1358500:CDS | 50.0% |
| !! | GTCGTTTTGTCCAAACGACG+CGG | + | tig0016345:6304-6323 | Msa1358500:CDS | 50.0% |
| CAAGTGGTACCTGCTTAAGC+TGG | - | tig0016345:6330-6349 | None:intergenic | 50.0% | |
| GTGCAGTTGGACAGAGTCTA+GGG | + | tig0016345:6494-6513 | Msa1358500:intron | 50.0% | |
| GAACAGTGTATCTGCTGGGA+AGG | + | tig0016345:6707-6726 | Msa1358500:CDS | 50.0% | |
| ! | AATACAGGGGCTTTTAGCCG+AGG | + | tig0016345:6894-6913 | Msa1358500:CDS | 50.0% |
| !!! | GGTGGAAACTTTTGGTGCCA+TGG | + | tig0016345:7060-7079 | Msa1358500:intron | 50.0% |
| AACAGGCACACCCAATGACA+AGG | - | tig0016345:9409-9428 | None:intergenic | 50.0% | |
| ! | TTTGAAGCAGCTGGTCACCA+TGG | + | tig0016345:9450-9469 | Msa1358500:CDS | 50.0% |
| TCTCCCAAAGAGCTGTCCAT+TGG | - | tig0016345:9483-9502 | None:intergenic | 50.0% | |
| ! | GCTTTTGTGTCTCAGCCTAG+AGG | + | tig0016345:9737-9756 | Msa1358500:CDS | 50.0% |
| !! | GAAGCTGAGAAGCATCTGTC+CGG | + | tig0016345:10020-10039 | Msa1358500:CDS | 50.0% |
| !! | TGAGAAGCATCTGTCCGGTA+TGG | + | tig0016345:10025-10044 | Msa1358500:CDS | 50.0% |
| GTCCGGTATGGTTGTTACCA+AGG | + | tig0016345:10037-10056 | Msa1358500:CDS | 50.0% | |
| TAACTCGTGGGCAGCAAACT+TGG | + | tig0016345:10133-10152 | Msa1358500:CDS | 50.0% | |
| TGGACTGAAGTTGCCTTACG+GGG | + | tig0016345:10392-10411 | Msa1358500:three_prime_UTR | 50.0% | |
| ! | TGTTGCTCACTGTGTTGGTG+AGG | + | tig0016345:10429-10448 | Msa1358500:three_prime_UTR | 50.0% |
| ! | GCATCACCAAGTGACTTGTC+AGG | - | tig0016345:10717-10736 | None:intergenic | 50.0% |
| GGTGCAGTTGGACAGAGTCT+AGG | + | tig0016345:6493-6512 | Msa1358500:intron | 55.0% | |
| TTTGGGCACGGACATGATCC+TGG | - | tig0016345:7244-7263 | None:intergenic | 55.0% | |
| CCAATCACAGTGCACAGTGC+AGG | - | tig0016345:8203-8222 | None:intergenic | 55.0% | |
| CCTGCACTGTGCACTGTGAT+TGG | + | tig0016345:8200-8219 | Msa1358500:intron | 55.0% | |
| ! | CTGGACTGCATCGGTGAATG+TGG | - | tig0016345:9268-9287 | None:intergenic | 55.0% |
| CTTAAGCTGGCCGCGTCGTT+TGG | - | tig0016345:6317-6336 | None:intergenic | 60.0% | |
| CATGCAGGCTGTGACAGCGA+TGG | + | tig0016345:6614-6633 | Msa1358500:intron | 60.0% | |
| TGTGACAGCGATGGTCCAGC+AGG | + | tig0016345:6623-6642 | Msa1358500:CDS | 60.0% | |
| GGACATGATCCTGGCGGTCT+AGG | - | tig0016345:7235-7254 | None:intergenic | 60.0% | |
| ACGACGCGGCCAGCTTAAGC+AGG | + | tig0016345:6318-6337 | Msa1358500:CDS | 65.0% | |
| TCGACTCTGCCTAGACCGCC+AGG | + | tig0016345:7223-7242 | Msa1358500:CDS | 65.0% | |
| GGGCACGGACATGATCCTGG+CGG | - | tig0016345:7241-7260 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016345 | gene | 6034 | 10791 | 6034 | ID=Msa1358500;Name=Msa1358500 |
| tig0016345 | mRNA | 6034 | 10791 | 6034 | ID=Msa1358500-mRNA-1;Parent=Msa1358500;Name=Msa1358500-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|1|0.90|1|0.9|0.90|11|425|477 |
| tig0016345 | exon | 6034 | 6339 | 6034 | ID=Msa1358500-mRNA-1:exon:10889;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 6621 | 6728 | 6621 | ID=Msa1358500-mRNA-1:exon:10890;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 6838 | 6942 | 6838 | ID=Msa1358500-mRNA-1:exon:10891;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 7061 | 7117 | 7061 | ID=Msa1358500-mRNA-1:exon:10892;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 7221 | 7417 | 7221 | ID=Msa1358500-mRNA-1:exon:10893;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 9015 | 9114 | 9015 | ID=Msa1358500-mRNA-1:exon:10894;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 9229 | 9341 | 9229 | ID=Msa1358500-mRNA-1:exon:10895;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 9444 | 9594 | 9444 | ID=Msa1358500-mRNA-1:exon:10896;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 9681 | 9758 | 9681 | ID=Msa1358500-mRNA-1:exon:10897;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 10020 | 10242 | 10020 | ID=Msa1358500-mRNA-1:exon:10898;Parent=Msa1358500-mRNA-1 |
| tig0016345 | exon | 10371 | 10791 | 10371 | ID=Msa1358500-mRNA-1:exon:10899;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 6034 | 6339 | 6034 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 6621 | 6728 | 6621 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 6838 | 6942 | 6838 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 7061 | 7117 | 7061 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 7221 | 7417 | 7221 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 9015 | 9114 | 9015 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 9229 | 9341 | 9229 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 9444 | 9594 | 9444 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 9681 | 9758 | 9681 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | CDS | 10020 | 10238 | 10020 | ID=Msa1358500-mRNA-1:cds;Parent=Msa1358500-mRNA-1 |
| tig0016345 | three_prime_UTR | 10239 | 10242 | 10239 | ID=Msa1358500-mRNA-1:three_prime_utr;Parent=Msa1358500-mRNA-1 |
| tig0016345 | three_prime_UTR | 10371 | 10791 | 10371 | ID=Msa1358500-mRNA-1:three_prime_utr;Parent=Msa1358500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
