AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1231840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1231840 MtrunA17_Chr8g0340751 98.251 686 12 0 1 686 1 686 0.0 1410
Msa1231840 MtrunA17_Chr3g0140561 77.336 503 111 1 8 510 9 508 0.0 834
Msa1231840 MtrunA17_Chr6g0483461 65.149 505 173 2 17 521 7 508 0.0 722
Msa1231840 MtrunA17_Chr8g0392531 65.235 489 169 1 24 512 15 502 0.0 707
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1231840 AT4G32850.9 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.5 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.3 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.1 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.10 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.6 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.2 64.139 633 196 8 1 617 2 619 0.0 815
Msa1231840 AT4G32850.8 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.13 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.15 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.16 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.4 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.7 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.17 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.14 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.12 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT4G32850.11 64.139 633 196 8 1 617 2 619 0.0 814
Msa1231840 AT2G25850.4 71.402 535 146 2 10 544 12 539 0.0 810
Msa1231840 AT2G25850.1 71.402 535 146 2 10 544 12 539 0.0 809
Msa1231840 AT2G25850.3 71.402 535 146 2 10 544 12 539 0.0 809
Msa1231840 AT2G25850.2 71.402 535 146 2 10 544 12 539 0.0 808
Msa1231840 AT2G25850.6 71.402 535 146 2 10 544 12 539 0.0 807
Msa1231840 AT2G25850.7 71.402 535 146 2 10 544 12 539 0.0 807
Msa1231840 AT2G25850.8 71.402 535 146 2 10 544 12 539 0.0 807
Msa1231840 AT2G25850.9 71.402 535 146 2 10 544 12 539 0.0 807
Msa1231840 AT2G25850.5 71.402 535 146 2 10 544 12 539 0.0 807
Msa1231840 AT1G17980.1 63.804 489 175 2 24 512 9 495 0.0 684
Msa1231840 AT1G17980.2 65.135 370 127 2 143 512 1 368 0.0 535
Msa1231840 AT3G06560.1 36.703 455 268 4 41 495 14 448 7.33e-89 288

Find 249 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGAAAATTGAATGAAATT+TGG 0.131722 8_2:+8098424 None:intergenic
CACTCCGGTGCTTGAAGTTT+TGG 0.160064 8_2:-8096229 Msa1231840:CDS
TTTGATCAGTGTACCCTTTC+AGG 0.188798 8_2:+8097516 None:intergenic
GTTTCCTCGGTGGTGTTAAC+TGG 0.190201 8_2:-8096070 Msa1231840:CDS
CTTCAAGAAAATGAGGTTTC+TGG 0.193646 8_2:-8095252 Msa1231840:CDS
CCTTTAGTTTCATCCATTCT+AGG 0.195179 8_2:-8098484 Msa1231840:five_prime_UTR
GAAAATGTCACCTCAATATT+TGG 0.204775 8_2:+8096361 None:intergenic
ACTTGCCTTATTACTGTCTT+TGG 0.211695 8_2:+8094476 None:intergenic
AGAAATTCAACAGTTGAATT+TGG 0.211973 8_2:-8094341 Msa1231840:three_prime_UTR
AACCCTAGATCCCTAAAATT+AGG 0.220090 8_2:+8098557 None:intergenic
GCATCATCTTATATTGATAT+TGG 0.248189 8_2:-8093863 Msa1231840:three_prime_UTR
ATTAGTGGGCATACATTAAA+AGG 0.249293 8_2:-8094089 Msa1231840:three_prime_UTR
TGCTTGTCTCTCGATTCTTT+AGG 0.249867 8_2:-8095995 Msa1231840:CDS
TCGCAGTTTCTCGTTGATTC+GGG 0.252450 8_2:-8098056 Msa1231840:intron
GCTTGTCTCTCGATTCTTTA+GGG 0.259935 8_2:-8095994 Msa1231840:CDS
ACAGACACATTTGGAGGTTT+TGG 0.268645 8_2:-8094785 Msa1231840:CDS
AGCCGGGGCATGACTTTCTT+TGG 0.271467 8_2:-8094184 Msa1231840:three_prime_UTR
TCAAACTTGAACTTCATAAC+TGG 0.280123 8_2:+8096960 None:intergenic
CCACATTCAGTCCCAGCTTC+TGG 0.281497 8_2:+8095021 None:intergenic
GGAATAAACACCTCGTCTTT+TGG 0.294343 8_2:+8096205 None:intergenic
CGACTTCATTAGTATTTGTT+AGG 0.296573 8_2:-8094124 Msa1231840:three_prime_UTR
GTTATGAAGTTCAAGTTTGA+TGG 0.296593 8_2:-8096957 Msa1231840:CDS
GAGAAAAGAAACAGGTAAAT+TGG 0.297266 8_2:+8094584 None:intergenic
CTATTAATATGTACATGTTC+TGG 0.305540 8_2:-8095404 Msa1231840:CDS
TCGAAAATTGAATGAAATTT+GGG 0.311791 8_2:+8098425 None:intergenic
GCCTGAAAATATTAGCAAAA+TGG 0.316731 8_2:+8094268 None:intergenic
TGATACAGACGCAACATATT+CGG 0.321661 8_2:+8094951 None:intergenic
TATCTCTTCTGTCATCATAA+AGG 0.328577 8_2:-8094703 Msa1231840:CDS
GCGTGTGTGTAAAGTGTTTA+GGG 0.334103 8_2:+8098678 None:intergenic
AGCATGCTTGGAACTGCATT+TGG 0.335457 8_2:+8096014 None:intergenic
CATGGGCTTGCAGAGGAAAC+AGG 0.348638 8_2:-8095490 Msa1231840:CDS
TTCACATAGTGCTTTCTTCA+TGG 0.349773 8_2:-8095508 Msa1231840:CDS
GAACATAACATGACAGGATT+TGG 0.350763 8_2:+8095951 None:intergenic
GTCGCAGTTTCTCGTTGATT+CGG 0.352160 8_2:-8098057 Msa1231840:intron
TACTGAACTGCAACCAGTTC+CGG 0.353640 8_2:-8096994 Msa1231840:CDS
AATGCTGTCATTCTCACATT+TGG 0.357290 8_2:-8097479 Msa1231840:CDS
CCCTAAAATTAGGGATGAAA+AGG 0.366049 8_2:+8098567 None:intergenic
ACTTGGATACACTGTGTATT+GGG 0.372655 8_2:-8097175 Msa1231840:CDS
ATGATTGAGCGTGATACTAT+TGG 0.372879 8_2:-8095585 Msa1231840:CDS
ACCCTAGATCCCTAAAATTA+GGG 0.377656 8_2:+8098558 None:intergenic
CAACTCATCTTGCTCACTAT+TGG 0.378921 8_2:+8095059 None:intergenic
TTCAAGAAAATGAGGTTTCT+GGG 0.381778 8_2:-8095251 Msa1231840:CDS
ACATTTGGTTCTTATCGTCT+TGG 0.383734 8_2:-8097464 Msa1231840:CDS
ACTGGTACTGTTGACCTTGA+TGG 0.384249 8_2:+8095294 None:intergenic
GCGGAACTGTTGAAGCATTT+CGG 0.386649 8_2:-8095431 Msa1231840:CDS
TTCTTCTTCGCAGGCTGTGC+CGG 0.391203 8_2:-8098246 Msa1231840:CDS
ATGTTTCACACATCCGTAGA+AGG 0.392928 8_2:-8095362 Msa1231840:CDS
AGCGTGTGTGTAAAGTGTTT+AGG 0.396684 8_2:+8098677 None:intergenic
GATTCTGTAAAACTTGGAAT+TGG 0.396836 8_2:-8094850 Msa1231840:CDS
TTTCTGGGACTGAACTTTGT+GGG 0.397193 8_2:-8095236 Msa1231840:CDS
TGCAATTGGCTTCACAGAAC+CGG 0.398487 8_2:+8094553 None:intergenic
AACATCCCTGCCATTGCAAT+TGG 0.400322 8_2:+8094539 None:intergenic
TCAATATACTCCCGAGGATA+AGG 0.409571 8_2:+8095546 None:intergenic
TAGCCTTCAAAGAAAACATA+TGG 0.413064 8_2:+8095705 None:intergenic
TTTGGTTGTGTTTGAGATCA+TGG 0.414940 8_2:-8098309 Msa1231840:exon
GAGATAGGGAAAGGAGGGTA+GGG 0.415286 8_2:-8094015 Msa1231840:three_prime_UTR
AGGGATCTGAAGAGGGAAAA+GGG 0.416146 8_2:+8098587 None:intergenic
ATCTCTTCTGTCATCATAAA+GGG 0.419886 8_2:-8094702 Msa1231840:CDS
ATGATGGAGCAGTTCCAATA+TGG 0.422932 8_2:-8095786 Msa1231840:CDS
GATACAGACGCAACATATTC+GGG 0.423361 8_2:+8094952 None:intergenic
CTGTTCCAAAGACAGTAATA+AGG 0.427753 8_2:-8094481 Msa1231840:intron
ATTGAAATCGAAATTGAAAT+CGG 0.430592 8_2:+8098533 None:intergenic
AGAAGAATGTCTCCAGAAGC+TGG 0.432381 8_2:-8095033 Msa1231840:CDS
TGAGATAGGGAAAGGAGGGT+AGG 0.433017 8_2:-8094016 Msa1231840:three_prime_UTR
CTACACGTTCCATGATATCC+TGG 0.433059 8_2:-8097033 Msa1231840:CDS
CTTTAGTTTCATCCATTCTA+GGG 0.435568 8_2:-8098483 Msa1231840:five_prime_UTR
AGATAGGGAAAGGAGGGTAG+GGG 0.436042 8_2:-8094014 Msa1231840:three_prime_UTR
AACCAAGCTTGCATCACCTA+TGG 0.437658 8_2:-8094231 Msa1231840:three_prime_UTR
TCACATAGTGCTTTCTTCAT+GGG 0.438419 8_2:-8095507 Msa1231840:CDS
GTTTCTGGGACTGAACTTTG+TGG 0.441877 8_2:-8095237 Msa1231840:CDS
TAGGAAAAGGACTCAACAAT+TGG 0.442789 8_2:-8098168 Msa1231840:CDS
ATGTACATGTTCTGGAAACC+TGG 0.445475 8_2:-8095396 Msa1231840:CDS
GTAAGTTCTAATTTAACTGC+TGG 0.446455 8_2:-8094294 Msa1231840:three_prime_UTR
ATTGAAGAAAGCCAGCCATT+TGG 0.447812 8_2:-8094316 Msa1231840:three_prime_UTR
GTGACACCATATTGTTTCTC+CGG 0.448464 8_2:+8098227 None:intergenic
AAGGGATCTGAAGAGGGAAA+AGG 0.448522 8_2:+8098586 None:intergenic
TCGATAGAGGAGAACGAGCT+TGG 0.449291 8_2:-8095930 Msa1231840:CDS
AGACACACTACAGACACATT+TGG 0.449680 8_2:-8094794 Msa1231840:CDS
AGGATTCTTGCTGAAATTAG+TGG 0.451873 8_2:-8094104 Msa1231840:three_prime_UTR
TGTACCCTTTCAGGCGAGTA+AGG 0.452086 8_2:+8097525 None:intergenic
CTAGAATGGATGAAACTAAA+GGG 0.452634 8_2:+8098485 None:intergenic
CCATGCTAGCCAGGATATCA+TGG 0.453705 8_2:+8097024 None:intergenic
AGATTGAGATAGGGAAAGGA+GGG 0.455915 8_2:-8094020 Msa1231840:three_prime_UTR
AAAGCTTGTTCCAAATATTG+AGG 0.456049 8_2:-8096371 Msa1231840:intron
CCCCATAGGTGATGCAAGCT+TGG 0.457018 8_2:+8094229 None:intergenic
GATAGGGAAAGGAGGGTAGG+GGG 0.458286 8_2:-8094013 Msa1231840:three_prime_UTR
TGAAACTAAAGGGAAAAGAT+TGG 0.458359 8_2:+8098495 None:intergenic
GGGACATGAGCGTCCGGAAC+TGG 0.458888 8_2:+8096981 None:intergenic
AGCAAGGGATTTGCCTTCTA+CGG 0.460601 8_2:+8095349 None:intergenic
ATGATGCAGGTTCATGGACC+TGG 0.461164 8_2:-8097203 Msa1231840:intron
ACTTGCGTGCTTGGAAAGGT+TGG 0.464315 8_2:-8095638 Msa1231840:CDS
CATCACCTATGGGGACTGAT+TGG 0.465098 8_2:-8094220 Msa1231840:three_prime_UTR
TGAAGAGGGAAAAGGGAAGG+AGG 0.468575 8_2:+8098594 None:intergenic
ATTAGAACTTACCAAATGGC+TGG 0.468935 8_2:+8094305 None:intergenic
CAAGCTCTCCGCAGAAGGAT+TGG 0.469809 8_2:+8095146 None:intergenic
GGTTCTTCATAGACTTGGAC+AGG 0.469912 8_2:-8097994 Msa1231840:intron
GAGATTGAGATAGGGAAAGG+AGG 0.469981 8_2:-8094021 Msa1231840:three_prime_UTR
CGAGATCGTTTAAAACCATC+AGG 0.472023 8_2:+8095318 None:intergenic
TCTGCGGAGAGCTTGACAAC+TGG 0.472596 8_2:-8095138 Msa1231840:CDS
AAGAAATACTTGCATAAAGA+AGG 0.475316 8_2:+8096922 None:intergenic
AATCGAGAGACAAGCATGCT+TGG 0.475633 8_2:+8096002 None:intergenic
CCTTGCTATGTGTTTCCTGA+TGG 0.475963 8_2:-8095333 Msa1231840:CDS
CGATAGAGGAGAACGAGCTT+GGG 0.477344 8_2:-8095929 Msa1231840:CDS
ACATCTGTTTCGAGCGAAGA+TGG 0.478731 8_2:-8094979 Msa1231840:CDS
TCATGGACCTGGAGCCGACT+TGG 0.481522 8_2:-8097192 Msa1231840:CDS
ATGTTGATGACTTGCGTGCT+TGG 0.481858 8_2:-8095647 Msa1231840:CDS
CCTACTGTTCGAAGTTTGAA+TGG 0.482112 8_2:-8096418 Msa1231840:CDS
CCTAGAATGGATGAAACTAA+AGG 0.483216 8_2:+8098484 None:intergenic
GTTGCGTCTGTATCAGTGGC+AGG 0.487411 8_2:-8094943 Msa1231840:CDS
CATGGGTAGTTCTGAAGGGT+TGG 0.488691 8_2:-8098291 Msa1231840:CDS
GTTCATTGCCTCAACAGCCC+TGG 0.490178 8_2:+8094903 None:intergenic
GGATATGCGGGAGTTATGAT+TGG 0.490365 8_2:+8095855 None:intergenic
TGGCATTAATCTGAAGAGCC+GGG 0.490550 8_2:-8094200 Msa1231840:three_prime_UTR
TTAAATTAGAACTTACCAAA+TGG 0.490653 8_2:+8094301 None:intergenic
GAACTGCATTTGGATACAAC+TGG 0.490788 8_2:+8096024 None:intergenic
AAAATCACTTCAAGAAAATG+AGG 0.491888 8_2:-8095259 Msa1231840:CDS
GAGATCATGGGTAGTTCTGA+AGG 0.493479 8_2:-8098296 Msa1231840:exon
GTGAAGCCAATTGCAATGGC+AGG 0.494398 8_2:-8094545 Msa1231840:three_prime_UTR
TTAGAGATTGAGATAGGGAA+AGG 0.495416 8_2:-8094024 Msa1231840:three_prime_UTR
GTTGGGTGGAATCACGCCTT+CGG 0.495487 8_2:-8095620 Msa1231840:CDS
TGATTGAGCGTGATACTATT+GGG 0.496467 8_2:-8095584 Msa1231840:CDS
ACAAAGGCTATTTCAATGGC+TGG 0.496666 8_2:-8098206 Msa1231840:CDS
GAAAAGATTGGAATTTAATG+AGG 0.496957 8_2:+8098507 None:intergenic
GACTTGGATACACTGTGTAT+TGG 0.497565 8_2:-8097176 Msa1231840:CDS
CAACAAGTGCTGATAGGAAA+AGG 0.498172 8_2:-8098181 Msa1231840:CDS
TGCAGTGCCATCCTTATCCT+CGG 0.502280 8_2:-8095557 Msa1231840:CDS
GAAAGGGTACACTGATCAAA+TGG 0.503748 8_2:-8097513 Msa1231840:CDS
CACACTACAGACACATTTGG+AGG 0.503813 8_2:-8094791 Msa1231840:CDS
ATGGGTAGTTCTGAAGGGTT+GGG 0.503889 8_2:-8098290 Msa1231840:CDS
ACCAAGCTTGCATCACCTAT+GGG 0.505653 8_2:-8094230 Msa1231840:three_prime_UTR
CCTAAAATTAGGGATGAAAA+GGG 0.505688 8_2:+8098568 None:intergenic
GAATTCATGCACGGATATGC+GGG 0.506238 8_2:+8095843 None:intergenic
ATGGCAGATTCTGTAAAACT+TGG 0.506523 8_2:-8094856 Msa1231840:CDS
TTTGTGGGAGGAACATTAAG+AGG 0.507624 8_2:-8095221 Msa1231840:CDS
CTTGCGTGCTTGGAAAGGTT+GGG 0.508065 8_2:-8095637 Msa1231840:CDS
TAGGTGATGCAAGCTTGGTT+TGG 0.509439 8_2:+8094234 None:intergenic
GCCTGCGAATTCTTCTTCGC+AGG 0.511287 8_2:-8098255 Msa1231840:CDS
TTGAACTGAATAAAGTCGGC+TGG 0.512283 8_2:-8095743 Msa1231840:CDS
CAATAGTGAGCAAGATGAGT+TGG 0.512351 8_2:-8095058 Msa1231840:CDS
GACTAGGTTGAGATCATCAT+AGG 0.512652 8_2:+8093913 None:intergenic
CAAGGAGGAGGCTGACAAGA+GGG 0.515906 8_2:-8098021 Msa1231840:CDS
TTGGCATTAATCTGAAGAGC+CGG 0.520594 8_2:-8094201 Msa1231840:three_prime_UTR
GGATTCTTGCTGAAATTAGT+GGG 0.522529 8_2:-8094103 Msa1231840:three_prime_UTR
AGTGTATCCAAGTCGGCTCC+AGG 0.523522 8_2:+8097185 None:intergenic
CCAGAAGCTGGGACTGAATG+TGG 0.524060 8_2:-8095021 Msa1231840:CDS
TCTTTGGTCTTCTGTACAGT+TGG 0.525261 8_2:-8094168 Msa1231840:three_prime_UTR
TAACTTCATCCATGCTAGCC+AGG 0.528539 8_2:+8097015 None:intergenic
GCTGTGCCGGAGAAACAATA+TGG 0.528556 8_2:-8098233 Msa1231840:CDS
CTGGTCCAACAAGTGCTGAT+AGG 0.529558 8_2:-8098187 Msa1231840:CDS
TGTCATGTTATGTTCGATAG+AGG 0.529833 8_2:-8095943 Msa1231840:CDS
TTTCCTCGGTGGTGTTAACT+GGG 0.531473 8_2:-8096069 Msa1231840:CDS
ATCTGAAGAGGGAAAAGGGA+AGG 0.532048 8_2:+8098591 None:intergenic
TTTCAGGTGACAGGTTTCCT+CGG 0.534958 8_2:-8096083 Msa1231840:intron
GGAGGCTGACAAGAGGGAAG+AGG 0.536319 8_2:-8098015 Msa1231840:CDS
GGTATGTTGATGATAGCGCC+AGG 0.545180 8_2:-8094921 Msa1231840:CDS
AGCACCTTACTCGCCTGAAA+GGG 0.545909 8_2:-8097529 Msa1231840:CDS
GTTGTCAAGCTCTCCGCAGA+AGG 0.546497 8_2:+8095141 None:intergenic
CTTTCTTCATGGGCTTGCAG+AGG 0.547388 8_2:-8095497 Msa1231840:CDS
ATGGGCTTGCAGAGGAAACA+GGG 0.548263 8_2:-8095489 Msa1231840:CDS
AGTGATTGTTGTACTTTCCG+AGG 0.550619 8_2:-8093952 Msa1231840:three_prime_UTR
GATGAAAAGGGATCTGAAGA+GGG 0.550718 8_2:+8098580 None:intergenic
GACCAAAGAAAGTCATGCCC+CGG 0.552560 8_2:+8094182 None:intergenic
GAAGAGGTTCTTCATAGACT+TGG 0.553602 8_2:-8097999 Msa1231840:CDS
TGGCCCAAAACTTCAAGCAC+CGG 0.554969 8_2:+8096225 None:intergenic
TGAATTCATGCACGGATATG+CGG 0.554989 8_2:+8095842 None:intergenic
TTGGTTGTGTTTGAGATCAT+GGG 0.557332 8_2:-8098308 Msa1231840:exon
CAAACTTGAACTTCATAACT+GGG 0.558075 8_2:+8096961 None:intergenic
ATAACTGGGACATGAGCGTC+CGG 0.561685 8_2:+8096975 None:intergenic
AGAGGAAGTATGATGACAAG+GGG 0.561998 8_2:-8095203 Msa1231840:CDS
GCATAAGATGAGATCGATCA+CGG 0.563138 8_2:+8095877 None:intergenic
TGATAGCGCCAGGGCTGTTG+AGG 0.563411 8_2:-8094911 Msa1231840:CDS
CGATCACGGGGATTTCTAAG+AGG 0.564126 8_2:+8095891 None:intergenic
AAGGACTCAACAATTGGAGA+AGG 0.567105 8_2:-8098162 Msa1231840:intron
CCATCAGGAAACACATAGCA+AGG 0.567135 8_2:+8095333 None:intergenic
TGTCACAAAGGCTATTTCAA+TGG 0.568611 8_2:-8098210 Msa1231840:CDS
TTCTGTGAAGCCAATTGCAA+TGG 0.569441 8_2:-8094549 Msa1231840:three_prime_UTR
CGCAGTTTCTCGTTGATTCG+GGG 0.570231 8_2:-8098055 Msa1231840:intron
CCATTCAAACTTCGAACAGT+AGG 0.570343 8_2:+8096418 None:intergenic
ACCTCGCGGTTCACATAGGA+TGG 0.570534 8_2:+8097152 None:intergenic
GTTGTATGAGAGCAAGGAGG+AGG 0.571433 8_2:-8098033 Msa1231840:CDS
CATAAGATGAGATCGATCAC+GGG 0.572964 8_2:+8095878 None:intergenic
AATGTGGATCGAATTCTAGC+GGG 0.573214 8_2:-8095005 Msa1231840:CDS
GATGACTTGCGTGCTTGGAA+AGG 0.573339 8_2:-8095642 Msa1231840:CDS
AGATCATGGGTAGTTCTGAA+GGG 0.574684 8_2:-8098295 Msa1231840:exon
GCAGTGCCATCCTTATCCTC+GGG 0.576279 8_2:-8095556 Msa1231840:CDS
TTCGGGGTTGTATGAGAGCA+AGG 0.576974 8_2:-8098039 Msa1231840:CDS
AAGCACCTTACTCGCCTGAA+AGG 0.577425 8_2:-8097530 Msa1231840:CDS
GATATTGAACTGAATAAAGT+CGG 0.578205 8_2:-8095747 Msa1231840:CDS
CTGGGACTGAACTTTGTGGG+AGG 0.578268 8_2:-8095233 Msa1231840:CDS
GCAAGGAGGAGGCTGACAAG+AGG 0.581154 8_2:-8098022 Msa1231840:CDS
AAGCACACTTCGAGTTATGA+TGG 0.583805 8_2:-8095802 Msa1231840:CDS
TCTATCGAACATAACATGAC+AGG 0.588638 8_2:+8095945 None:intergenic
GAAGAATGTCTCCAGAAGCT+GGG 0.589240 8_2:-8095032 Msa1231840:CDS
CAGGTGACAGGTTTCCTCGG+TGG 0.589464 8_2:-8096080 Msa1231840:CDS
TTATAACTTGAATTCATGCA+CGG 0.589909 8_2:+8095834 None:intergenic
TTAAACGATCTCGACCATCA+AGG 0.590903 8_2:-8095308 Msa1231840:CDS
GGATGAAAAGGGATCTGAAG+AGG 0.591744 8_2:+8098579 None:intergenic
TTCCGCGTATATCAAACTGC+TGG 0.593316 8_2:+8095448 None:intergenic
AGGGAACAAAAGCGCGATCG+TGG 0.594151 8_2:+8098614 None:intergenic
CCATGATATCCTGGCTAGCA+TGG 0.600256 8_2:-8097024 Msa1231840:CDS
GGGTGTATACACAGTGGCGG+TGG 0.601410 8_2:-8095974 Msa1231840:CDS
GATGTTTCTTGATTCTACGA+AGG 0.602847 8_2:-8094522 Msa1231840:three_prime_UTR
TACAGAATCTGCCATGTAGG+TGG 0.604826 8_2:+8094864 None:intergenic
ATATGTTGCGTCTGTATCAG+TGG 0.605141 8_2:-8094947 Msa1231840:CDS
GAAACATGAATGTCCATCCC+AGG 0.613217 8_2:+8095378 None:intergenic
TAAGAGGAAGTATGATGACA+AGG 0.614826 8_2:-8095205 Msa1231840:CDS
GCCTGCGAAGAAGAATTCGC+AGG 0.615191 8_2:+8098254 None:intergenic
CAGAAGAGATACATCGAAGT+CGG 0.619164 8_2:+8094715 None:intergenic
AAAACTTGGAATTGGTACAC+TGG 0.619626 8_2:-8094842 Msa1231840:CDS
TAGATTCGATACCACCTACA+TGG 0.620130 8_2:-8094875 Msa1231840:CDS
GAAGAGGGAAAAGGGAAGGA+GGG 0.624868 8_2:+8098595 None:intergenic
GGGAGTATATTGATGATACA+AGG 0.626920 8_2:-8095536 Msa1231840:CDS
TTGCGTCTGTATCAGTGGCA+GGG 0.626979 8_2:-8094942 Msa1231840:CDS
TCATCAAAGTCAGCTGCCGA+AGG 0.629657 8_2:+8095604 None:intergenic
ATCAAGGTCAACAGTACCAG+TGG 0.629940 8_2:-8095292 Msa1231840:CDS
TAATGCCAATCAGTCCCCAT+AGG 0.633586 8_2:+8094215 None:intergenic
TAAAGGGACACTAGTGCATG+TGG 0.636614 8_2:-8094686 Msa1231840:CDS
AAGAGGAAGTATGATGACAA+GGG 0.640349 8_2:-8095204 Msa1231840:CDS
GGCATTAATCTGAAGAGCCG+GGG 0.640933 8_2:-8094199 Msa1231840:three_prime_UTR
GTTGAGTTCATATATAACCT+CGG 0.643258 8_2:+8093935 None:intergenic
GAAACAATATGGTGTCACAA+AGG 0.649957 8_2:-8098222 Msa1231840:CDS
AGTACTTTCGAACAACACTC+CGG 0.650401 8_2:-8096244 Msa1231840:CDS
GAATGTGGATCGAATTCTAG+CGG 0.652905 8_2:-8095006 Msa1231840:CDS
AGAAATGTACACAAAAGACT+AGG 0.655502 8_2:+8093897 None:intergenic
TGAAGCCAATTGCAATGGCA+GGG 0.655563 8_2:-8094544 Msa1231840:three_prime_UTR
CATGTTCTGGAAACCTGGGA+TGG 0.656096 8_2:-8095391 Msa1231840:CDS
ATCTACCTCGCGGTTCACAT+AGG 0.659643 8_2:+8097148 None:intergenic
TGTACATGTTCTGGAAACCT+GGG 0.662881 8_2:-8095395 Msa1231840:CDS
TATACTCCCGAGGATAAGGA+TGG 0.662952 8_2:+8095550 None:intergenic
CATCAGGAAACACATAGCAA+GGG 0.663187 8_2:+8095334 None:intergenic
AGGGTACACTGATCAAATGG+TGG 0.673512 8_2:-8097510 Msa1231840:CDS
TTAGGGTGTATACACAGTGG+CGG 0.674065 8_2:-8095977 Msa1231840:CDS
ACATTGCGCCAATCCTTCTG+CGG 0.675659 8_2:-8095154 Msa1231840:CDS
GCGTGCTTGGAAAGGTTGGG+TGG 0.677063 8_2:-8095634 Msa1231840:CDS
AATACACAGTGTATCCAAGT+CGG 0.677593 8_2:+8097178 None:intergenic
GTATCATCAATATACTCCCG+AGG 0.677782 8_2:+8095540 None:intergenic
TGGGCTTGCAGAGGAAACAG+GGG 0.679746 8_2:-8095488 Msa1231840:CDS
GTATGTTGATGATAGCGCCA+GGG 0.682636 8_2:-8094920 Msa1231840:CDS
GAGGAAGTATGATGACAAGG+GGG 0.683714 8_2:-8095202 Msa1231840:CDS
CCAAGCTTGCATCACCTATG+GGG 0.689398 8_2:-8094229 Msa1231840:three_prime_UTR
GGCCAGCAGTTTGATATACG+CGG 0.695942 8_2:-8095450 Msa1231840:CDS
GGGCTTGCAGAGGAAACAGG+GGG 0.708245 8_2:-8095487 Msa1231840:CDS
GATTGTCAAGAGTTGAAGAG+TGG 0.720032 8_2:-8095099 Msa1231840:CDS
ATGTGGATCGAATTCTAGCG+GGG 0.723758 8_2:-8095004 Msa1231840:CDS
ATATGGCAACAAAATCTGTG+AGG 0.725494 8_2:-8095769 Msa1231840:CDS
ATAAGATGAGATCGATCACG+GGG 0.734729 8_2:+8095879 None:intergenic
TCTTTAGGGTGTATACACAG+TGG 0.754890 8_2:-8095980 Msa1231840:CDS
GGGGTTGTATGAGAGCAAGG+AGG 0.782796 8_2:-8098036 Msa1231840:CDS
TTGCCCAGTTAACACCACCG+AGG 0.815031 8_2:+8096066 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATCAACAAAAAATAAA+GGG + chr8_2:8094423-8094442 None:intergenic 10.0%
!! AATAAATCAACAAAAAATAA+AGG + chr8_2:8094424-8094443 None:intergenic 10.0%
!! AAAACAAATTAAATAAGTAA+GGG + chr8_2:8094945-8094964 None:intergenic 10.0%
!!! TGTTTTTAAATGAAATTTTA+CGG - chr8_2:8095794-8095813 Msa1231840:CDS 10.0%
!!! TTATTTAACATTTTCTTTTT+TGG - chr8_2:8096250-8096269 Msa1231840:intron 10.0%
!! AAAAAAATAAAAATTGAGAA+AGG + chr8_2:8097772-8097791 None:intergenic 10.0%
!! CAAAACAAATTAAATAAGTA+AGG + chr8_2:8094946-8094965 None:intergenic 15.0%
!! AATTGAAACAAAAAGTTAAA+AGG + chr8_2:8095163-8095182 None:intergenic 15.0%
!!! ATTTTTATTTTTTATGATGC+AGG - chr8_2:8095306-8095325 Msa1231840:CDS 15.0%
!! AAATTAACATTTGAATCAAT+AGG + chr8_2:8095893-8095912 None:intergenic 15.0%
!!! TGATTCAAATGTTAATTTTA+TGG - chr8_2:8095895-8095914 Msa1231840:CDS 15.0%
!!! TTTAAATATTTTATTTGTGC+TGG - chr8_2:8095959-8095978 Msa1231840:CDS 15.0%
!!! TTTTATTGTTAGCTTTTATT+AGG - chr8_2:8097897-8097916 Msa1231840:intron 15.0%
!!! TTTATTGTTAGCTTTTATTA+GGG - chr8_2:8097898-8097917 Msa1231840:intron 15.0%
!! ATTGAAATCGAAATTGAAAT+CGG + chr8_2:8093992-8094011 None:intergenic 20.0%
!! TCGAAAATTGAATGAAATTT+GGG + chr8_2:8094100-8094119 None:intergenic 20.0%
!! ATCGAAAATTGAATGAAATT+TGG + chr8_2:8094101-8094120 None:intergenic 20.0%
!! AATCTTAACAAAATTGCTAT+AGG + chr8_2:8094647-8094666 None:intergenic 20.0%
!!! AATGTTTATTTTTGACAGAT+GGG - chr8_2:8094742-8094761 Msa1231840:CDS 20.0%
!! AATTACCATGAAAATGTTAA+TGG + chr8_2:8094921-8094940 None:intergenic 20.0%
!!! TTCATGCTTTGATTTATTTT+TGG - chr8_2:8095118-8095137 Msa1231840:CDS 20.0%
!!! TCAAATATATCTGTTGTTTA+TGG - chr8_2:8095267-8095286 Msa1231840:CDS 20.0%
!! AAAAATATATCACTTACTTC+AGG + chr8_2:8095637-8095656 None:intergenic 20.0%
!!! AAATCTTAGATTTGGAATAT+GGG - chr8_2:8095741-8095760 Msa1231840:CDS 20.0%
!!! AAATGTTAATTTTATGGAGT+TGG - chr8_2:8095901-8095920 Msa1231840:CDS 20.0%
!!! AATAAACAAATGAGTTGAAA+TGG + chr8_2:8096376-8096395 None:intergenic 20.0%
!!! TTATTGTTAGCTTTTATTAG+GGG - chr8_2:8097899-8097918 Msa1231840:intron 20.0%
!! TTAAATTAGAACTTACCAAA+TGG + chr8_2:8098224-8098243 None:intergenic 20.0%
! GAAAAGATTGGAATTTAATG+AGG + chr8_2:8094018-8094037 None:intergenic 25.0%
!!! AGATTCGATTTTTATCGATT+TGG - chr8_2:8094195-8094214 Msa1231840:three_prime_UTR 25.0%
!! GATTATGATTTTTGTAGTGT+TGG - chr8_2:8094604-8094623 Msa1231840:three_prime_UTR 25.0%
! CTATAGGCAAATAATAACAT+TGG + chr8_2:8094631-8094650 None:intergenic 25.0%
!!! GATTTTGTAATTGATGATCA+TGG - chr8_2:8094663-8094682 Msa1231840:CDS 25.0%
!!! GAATGTTTATTTTTGACAGA+TGG - chr8_2:8094741-8094760 Msa1231840:CDS 25.0%
! ATTTAATTGTTGATGCATGT+TGG - chr8_2:8094771-8094790 Msa1231840:CDS 25.0%
! TGTTTCAGATAGTAAAAAGT+TGG - chr8_2:8094966-8094985 Msa1231840:CDS 25.0%
! GTTTCAGATAGTAAAAAGTT+GGG - chr8_2:8094967-8094986 Msa1231840:CDS 25.0%
! TTTGGTGAATTAAAACCTAA+CGG - chr8_2:8095136-8095155 Msa1231840:CDS 25.0%
!!! TGACCTTTCATATTTTTATC+AGG - chr8_2:8095456-8095475 Msa1231840:CDS 25.0%
! AAGAAATACTTGCATAAAGA+AGG + chr8_2:8095603-8095622 None:intergenic 25.0%
! GTAACTTCAAATCTTAGATT+TGG - chr8_2:8095733-8095752 Msa1231840:CDS 25.0%
!! CAAATCTTAGATTTGGAATA+TGG - chr8_2:8095740-8095759 Msa1231840:CDS 25.0%
!! AATATGGGTTGTGTTATAAT+AGG - chr8_2:8095756-8095775 Msa1231840:CDS 25.0%
!! CATCTTAATGCACATTTTTA+CGG - chr8_2:8095845-8095864 Msa1231840:CDS 25.0%
! GGAAAAAATAATACTCACAT+TGG + chr8_2:8096341-8096360 None:intergenic 25.0%
!!! TGTTTATTTTGAATAACCGA+TGG - chr8_2:8096388-8096407 Msa1231840:CDS 25.0%
! TTATAACTTGAATTCATGCA+CGG + chr8_2:8096691-8096710 None:intergenic 25.0%
! GATATTGAACTGAATAAAGT+CGG - chr8_2:8096775-8096794 Msa1231840:intron 25.0%
! CTATTAATATGTACATGTTC+TGG - chr8_2:8097118-8097137 Msa1231840:intron 25.0%
!! TCATTTTCTTGAAGTGATTT+TGG + chr8_2:8097264-8097283 None:intergenic 25.0%
! AAAATCACTTCAAGAAAATG+AGG - chr8_2:8097263-8097282 Msa1231840:intron 25.0%
!! TTTTGCTTTGTATATGTAAC+AGG - chr8_2:8098132-8098151 Msa1231840:intron 25.0%
! AGAAATTCAACAGTTGAATT+TGG - chr8_2:8098181-8098200 Msa1231840:CDS 25.0%
!! TCCATTTTGCTAATATTTTC+AGG - chr8_2:8098253-8098272 Msa1231840:CDS 25.0%
! GCATCATCTTATATTGATAT+TGG - chr8_2:8098659-8098678 Msa1231840:five_prime_UTR 25.0%
CAAAAGATGAGAAGAAAAAG+AGG + chr8_2:8093885-8093904 None:intergenic 30.0%
CCTAAAATTAGGGATGAAAA+GGG + chr8_2:8093957-8093976 None:intergenic 30.0%
! CCTTTTCATCCCTAATTTTA+GGG - chr8_2:8093955-8093974 Msa1231840:three_prime_UTR 30.0%
TGAAACTAAAGGGAAAAGAT+TGG + chr8_2:8094030-8094049 None:intergenic 30.0%
CTAGAATGGATGAAACTAAA+GGG + chr8_2:8094040-8094059 None:intergenic 30.0%
! CTTTAGTTTCATCCATTCTA+GGG - chr8_2:8094039-8094058 Msa1231840:three_prime_UTR 30.0%
!!! TTCGTTGGTTTTTGATTTCT+GGG - chr8_2:8094142-8094161 Msa1231840:three_prime_UTR 30.0%
!! GTTCATTGATTTGTCTATGA+TGG - chr8_2:8094395-8094414 Msa1231840:intron 30.0%
! ATTGATGATCATGGTAACTT+AGG - chr8_2:8094672-8094691 Msa1231840:CDS 30.0%
! TTGATGATCATGGTAACTTA+GGG - chr8_2:8094673-8094692 Msa1231840:CDS 30.0%
!!! CATGTTGGTGATGATTTTAT+TGG - chr8_2:8094786-8094805 Msa1231840:CDS 30.0%
! ACTAGCCATTAACATTTTCA+TGG - chr8_2:8094913-8094932 Msa1231840:CDS 30.0%
TTGGTGAATTAAAACCTAAC+GGG - chr8_2:8095137-8095156 Msa1231840:CDS 30.0%
!! TTGCAAAGTATTGTACGATA+TGG - chr8_2:8095200-8095219 Msa1231840:CDS 30.0%
!! TGCAAAGTATTGTACGATAT+GGG - chr8_2:8095201-8095220 Msa1231840:CDS 30.0%
!!! TTTTTTATGATGCAGGTTCA+TGG - chr8_2:8095313-8095332 Msa1231840:CDS 30.0%
! ATATCCTGCCACATTAATTT+TGG - chr8_2:8095395-8095414 Msa1231840:CDS 30.0%
CCTCCTGATAAAAATATGAA+AGG + chr8_2:8095462-8095481 None:intergenic 30.0%
!! CCTTTCATATTTTTATCAGG+AGG - chr8_2:8095459-8095478 Msa1231840:CDS 30.0%
CAAACTTGAACTTCATAACT+GGG + chr8_2:8095564-8095583 None:intergenic 30.0%
TCAAACTTGAACTTCATAAC+TGG + chr8_2:8095565-8095584 None:intergenic 30.0%
! GTTATGAAGTTCAAGTTTGA+TGG - chr8_2:8095565-8095584 Msa1231840:CDS 30.0%
CGTAAAAATGTGCATTAAGA+TGG + chr8_2:8095847-8095866 None:intergenic 30.0%
!! TAATTTTATGGAGTTGGTCT+TGG - chr8_2:8095907-8095926 Msa1231840:CDS 30.0%
! AAAGCTTGTTCCAAATATTG+AGG - chr8_2:8096151-8096170 Msa1231840:intron 30.0%
GAAAATGTCACCTCAATATT+TGG + chr8_2:8096164-8096183 None:intergenic 30.0%
CATGATAAGAAATGCATAAC+AGG + chr8_2:8096186-8096205 None:intergenic 30.0%
! TTGAAATGGTTTGTAAGAGA+AGG + chr8_2:8096362-8096381 None:intergenic 30.0%
GAATAATTTGAACTAGCCAT+CGG + chr8_2:8096407-8096426 None:intergenic 30.0%
! ATTCTTGTCTTCACATTTTC+AGG - chr8_2:8096423-8096442 Msa1231840:CDS 30.0%
! GTACCATATGTTTTCTTTGA+AGG - chr8_2:8096814-8096833 Msa1231840:intron 30.0%
TAGCCTTCAAAGAAAACATA+TGG + chr8_2:8096820-8096839 None:intergenic 30.0%
TTCAAGAAAATGAGGTTTCT+GGG - chr8_2:8097271-8097290 Msa1231840:intron 30.0%
GATTCTGTAAAACTTGGAAT+TGG - chr8_2:8097672-8097691 Msa1231840:intron 30.0%
TATCTCTTCTGTCATCATAA+AGG - chr8_2:8097819-8097838 Msa1231840:intron 30.0%
ATCTCTTCTGTCATCATAAA+GGG - chr8_2:8097820-8097839 Msa1231840:intron 30.0%
GAGAAAAGAAACAGGTAAAT+TGG + chr8_2:8097941-8097960 None:intergenic 30.0%
CAAAAAAGGAGAAAAGAAAC+AGG + chr8_2:8097949-8097968 None:intergenic 30.0%
!! TTTCTTTTCTCCTTTTTTGC+CGG - chr8_2:8097950-8097969 Msa1231840:intron 30.0%
! GTAAGTTCTAATTTAACTGC+TGG - chr8_2:8098228-8098247 Msa1231840:CDS 30.0%
GCCTGAAAATATTAGCAAAA+TGG + chr8_2:8098257-8098276 None:intergenic 30.0%
CGACTTCATTAGTATTTGTT+AGG - chr8_2:8098398-8098417 Msa1231840:five_prime_UTR 30.0%
! ATTAGTGGGCATACATTAAA+AGG - chr8_2:8098433-8098452 Msa1231840:five_prime_UTR 30.0%
!! TGCATTTTAGAGATTGAGAT+AGG - chr8_2:8098492-8098511 Msa1231840:five_prime_UTR 30.0%
!! GCATTTTAGAGATTGAGATA+GGG - chr8_2:8098493-8098512 Msa1231840:five_prime_UTR 30.0%
GTTGAGTTCATATATAACCT+CGG + chr8_2:8098590-8098609 None:intergenic 30.0%
AGAAATGTACACAAAAGACT+AGG + chr8_2:8098628-8098647 None:intergenic 30.0%
! CCCTTTTCATCCCTAATTTT+AGG - chr8_2:8093954-8093973 Msa1231840:three_prime_UTR 35.0%
CCCTAAAATTAGGGATGAAA+AGG + chr8_2:8093958-8093977 None:intergenic 35.0%
!! ATCCCTAATTTTAGGGATCT+AGG - chr8_2:8093962-8093981 Msa1231840:three_prime_UTR 35.0%
!! TCCCTAATTTTAGGGATCTA+GGG - chr8_2:8093963-8093982 Msa1231840:three_prime_UTR 35.0%
ACCCTAGATCCCTAAAATTA+GGG + chr8_2:8093967-8093986 None:intergenic 35.0%
AACCCTAGATCCCTAAAATT+AGG + chr8_2:8093968-8093987 None:intergenic 35.0%
CCTAGAATGGATGAAACTAA+AGG + chr8_2:8094041-8094060 None:intergenic 35.0%
! CCTTTAGTTTCATCCATTCT+AGG - chr8_2:8094038-8094057 Msa1231840:three_prime_UTR 35.0%
AGAAAAACGAAACCCTAGAA+TGG + chr8_2:8094054-8094073 None:intergenic 35.0%
!!! CTTCGTTGGTTTTTGATTTC+TGG - chr8_2:8094141-8094160 Msa1231840:three_prime_UTR 35.0%
!!! TCGTTGGTTTTTGATTTCTG+GGG - chr8_2:8094143-8094162 Msa1231840:three_prime_UTR 35.0%
! TTTGGTTGTGTTTGAGATCA+TGG - chr8_2:8094213-8094232 Msa1231840:three_prime_UTR 35.0%
! TTGGTTGTGTTTGAGATCAT+GGG - chr8_2:8094214-8094233 Msa1231840:three_prime_UTR 35.0%
!! GAAACAATATGGTGTCACAA+AGG - chr8_2:8094300-8094319 Msa1231840:three_prime_UTR 35.0%
! TGTCACAAAGGCTATTTCAA+TGG - chr8_2:8094312-8094331 Msa1231840:three_prime_UTR 35.0%
TAGGAAAAGGACTCAACAAT+TGG - chr8_2:8094354-8094373 Msa1231840:three_prime_UTR 35.0%
TTGGAGAAGGTTTGATTGAT+AGG - chr8_2:8094373-8094392 Msa1231840:intron 35.0%
AATGCTGTCATTCTCACATT+TGG - chr8_2:8095043-8095062 Msa1231840:CDS 35.0%
!! ACATTTGGTTCTTATCGTCT+TGG - chr8_2:8095058-8095077 Msa1231840:CDS 35.0%
AAAAAGTTAAAAGGCCCGTT+AGG + chr8_2:8095154-8095173 None:intergenic 35.0%
!! GCAAAGTATTGTACGATATG+GGG - chr8_2:8095202-8095221 Msa1231840:CDS 35.0%
AATACACAGTGTATCCAAGT+CGG + chr8_2:8095347-8095366 None:intergenic 35.0%
ACTTGGATACACTGTGTATT+GGG - chr8_2:8095347-8095366 Msa1231840:CDS 35.0%
ACAACCAAAATTAATGTGGC+AGG + chr8_2:8095402-8095421 None:intergenic 35.0%
GCACACAACCAAAATTAATG+TGG + chr8_2:8095406-8095425 None:intergenic 35.0%
TGAAGTTACTGATGTGACTA+GGG + chr8_2:8095722-8095741 None:intergenic 35.0%
TTGAAGTTACTGATGTGACT+AGG + chr8_2:8095723-8095742 None:intergenic 35.0%
!! TTGGTCTTGGTGTTATTAAG+AGG - chr8_2:8095920-8095939 Msa1231840:CDS 35.0%
CAGTGTGCAACAATTAGAAA+TGG + chr8_2:8096218-8096237 None:intergenic 35.0%
GAACATAACATGACAGGATT+TGG + chr8_2:8096574-8096593 None:intergenic 35.0%
TCTATCGAACATAACATGAC+AGG + chr8_2:8096580-8096599 None:intergenic 35.0%
TGTCATGTTATGTTCGATAG+AGG - chr8_2:8096579-8096598 Msa1231840:intron 35.0%
! CACAGATTTTGTTGCCATAT+TGG + chr8_2:8096753-8096772 None:intergenic 35.0%
ATATGGCAACAAAATCTGTG+AGG - chr8_2:8096753-8096772 Msa1231840:intron 35.0%
ATGATTGAGCGTGATACTAT+TGG - chr8_2:8096937-8096956 Msa1231840:CDS 35.0%
TGATTGAGCGTGATACTATT+GGG - chr8_2:8096938-8096957 Msa1231840:CDS 35.0%
! GGGAGTATATTGATGATACA+AGG - chr8_2:8096986-8097005 Msa1231840:CDS 35.0%
TTCACATAGTGCTTTCTTCA+TGG - chr8_2:8097014-8097033 Msa1231840:CDS 35.0%
TCACATAGTGCTTTCTTCAT+GGG - chr8_2:8097015-8097034 Msa1231840:CDS 35.0%
CTTCAAGAAAATGAGGTTTC+TGG - chr8_2:8097270-8097289 Msa1231840:intron 35.0%
! TAAGAGGAAGTATGATGACA+AGG - chr8_2:8097317-8097336 Msa1231840:intron 35.0%
! AAGAGGAAGTATGATGACAA+GGG - chr8_2:8097318-8097337 Msa1231840:intron 35.0%
TGATACAGACGCAACATATT+CGG + chr8_2:8097574-8097593 None:intergenic 35.0%
! TTTTACAGAATCTGCCATGT+AGG + chr8_2:8097664-8097683 None:intergenic 35.0%
ATGGCAGATTCTGTAAAACT+TGG - chr8_2:8097666-8097685 Msa1231840:intron 35.0%
AAAACTTGGAATTGGTACAC+TGG - chr8_2:8097680-8097699 Msa1231840:intron 35.0%
GATGTTTCTTGATTCTACGA+AGG - chr8_2:8098000-8098019 Msa1231840:CDS 35.0%
CTGTTCCAAAGACAGTAATA+AGG - chr8_2:8098041-8098060 Msa1231840:CDS 35.0%
! ACTTGCCTTATTACTGTCTT+TGG + chr8_2:8098049-8098068 None:intergenic 35.0%
ATTAGAACTTACCAAATGGC+TGG + chr8_2:8098220-8098239 None:intergenic 35.0%
!! CTAATATTTTCAGGCTTGCT+TGG - chr8_2:8098262-8098281 Msa1231840:CDS 35.0%
AGGATTCTTGCTGAAATTAG+TGG - chr8_2:8098418-8098437 Msa1231840:five_prime_UTR 35.0%
GGATTCTTGCTGAAATTAGT+GGG - chr8_2:8098419-8098438 Msa1231840:five_prime_UTR 35.0%
TTAGAGATTGAGATAGGGAA+AGG - chr8_2:8098498-8098517 Msa1231840:five_prime_UTR 35.0%
! AGCGTGTGTGTAAAGTGTTT+AGG + chr8_2:8093848-8093867 None:intergenic 40.0%
GATGAAAAGGGATCTGAAGA+GGG + chr8_2:8093945-8093964 None:intergenic 40.0%
!! CTTGCTTTTGTTCTCTTCGT+TGG - chr8_2:8094127-8094146 Msa1231840:three_prime_UTR 40.0%
!! AGATCATGGGTAGTTCTGAA+GGG - chr8_2:8094227-8094246 Msa1231840:three_prime_UTR 40.0%
! GTGACACCATATTGTTTCTC+CGG + chr8_2:8094298-8094317 None:intergenic 40.0%
! ACAAAGGCTATTTCAATGGC+TGG - chr8_2:8094316-8094335 Msa1231840:three_prime_UTR 40.0%
! CTTTTCCTATCAGCACTTGT+TGG + chr8_2:8094343-8094362 None:intergenic 40.0%
!! CAACAAGTGCTGATAGGAAA+AGG - chr8_2:8094341-8094360 Msa1231840:three_prime_UTR 40.0%
AAGGACTCAACAATTGGAGA+AGG - chr8_2:8094360-8094379 Msa1231840:three_prime_UTR 40.0%
GAAGAGGTTCTTCATAGACT+TGG - chr8_2:8094523-8094542 Msa1231840:three_prime_UTR 40.0%
TCATGGTAACTTAGGGATGT+AGG - chr8_2:8094680-8094699 Msa1231840:CDS 40.0%
CATGGTAACTTAGGGATGTA+GGG - chr8_2:8094681-8094700 Msa1231840:CDS 40.0%
ATGGTAACTTAGGGATGTAG+GGG - chr8_2:8094682-8094701 Msa1231840:CDS 40.0%
GGGGTAAATATGGAACTGTA+TGG - chr8_2:8094702-8094721 Msa1231840:CDS 40.0%
TTTGATCAGTGTACCCTTTC+AGG + chr8_2:8095009-8095028 None:intergenic 40.0%
! GAAAGGGTACACTGATCAAA+TGG - chr8_2:8095009-8095028 Msa1231840:CDS 40.0%
ATCAAAGCATGAAGATGTGC+AGG + chr8_2:8095111-8095130 None:intergenic 40.0%
GACTTGGATACACTGTGTAT+TGG - chr8_2:8095346-8095365 Msa1231840:CDS 40.0%
!!! CCAGGTGGTTGTTTTGATAA+AGG + chr8_2:8095675-8095694 None:intergenic 40.0%
CCTTTATCAAAACAACCACC+TGG - chr8_2:8095672-8095691 Msa1231840:CDS 40.0%
AAACAACCACCTGGATGAAA+AGG - chr8_2:8095681-8095700 Msa1231840:CDS 40.0%
AACAACCACCTGGATGAAAA+GGG - chr8_2:8095682-8095701 Msa1231840:CDS 40.0%
!! TTTGTTTCTGTCTTTCGAGC+AGG - chr8_2:8096037-8096056 Msa1231840:CDS 40.0%
CCATTCAAACTTCGAACAGT+AGG + chr8_2:8096107-8096126 None:intergenic 40.0%
CCTACTGTTCGAAGTTTGAA+TGG - chr8_2:8096104-8096123 Msa1231840:intron 40.0%
AGTACTTTCGAACAACACTC+CGG - chr8_2:8096278-8096297 Msa1231840:intron 40.0%
! GGAATAAACACCTCGTCTTT+TGG + chr8_2:8096320-8096339 None:intergenic 40.0%
!!! TCTTCACATTTTCAGGTGAC+AGG - chr8_2:8096430-8096449 Msa1231840:CDS 40.0%
GAACTGCATTTGGATACAAC+TGG + chr8_2:8096501-8096520 None:intergenic 40.0%
TGCTTGTCTCTCGATTCTTT+AGG - chr8_2:8096527-8096546 Msa1231840:intron 40.0%
GCTTGTCTCTCGATTCTTTA+GGG - chr8_2:8096528-8096547 Msa1231840:intron 40.0%
!! TCTTTAGGGTGTATACACAG+TGG - chr8_2:8096542-8096561 Msa1231840:intron 40.0%
ATAAGATGAGATCGATCACG+GGG + chr8_2:8096646-8096665 None:intergenic 40.0%
CATAAGATGAGATCGATCAC+GGG + chr8_2:8096647-8096666 None:intergenic 40.0%
GCATAAGATGAGATCGATCA+CGG + chr8_2:8096648-8096667 None:intergenic 40.0%
TGAATTCATGCACGGATATG+CGG + chr8_2:8096683-8096702 None:intergenic 40.0%
! AAGCACACTTCGAGTTATGA+TGG - chr8_2:8096720-8096739 Msa1231840:intron 40.0%
! ATGATGGAGCAGTTCCAATA+TGG - chr8_2:8096736-8096755 Msa1231840:intron 40.0%
TTGAACTGAATAAAGTCGGC+TGG - chr8_2:8096779-8096798 Msa1231840:intron 40.0%
TCAATATACTCCCGAGGATA+AGG + chr8_2:8096979-8096998 None:intergenic 40.0%
GTATCATCAATATACTCCCG+AGG + chr8_2:8096985-8097004 None:intergenic 40.0%
!! ATGTACATGTTCTGGAAACC+TGG - chr8_2:8097126-8097145 Msa1231840:intron 40.0%
!! TGTACATGTTCTGGAAACCT+GGG - chr8_2:8097127-8097146 Msa1231840:intron 40.0%
ATGTTTCACACATCCGTAGA+AGG - chr8_2:8097160-8097179 Msa1231840:CDS 40.0%
CATCAGGAAACACATAGCAA+GGG + chr8_2:8097191-8097210 None:intergenic 40.0%
! CGAGATCGTTTAAAACCATC+AGG + chr8_2:8097207-8097226 None:intergenic 40.0%
TTAAACGATCTCGACCATCA+AGG - chr8_2:8097214-8097233 Msa1231840:intron 40.0%
!! TTTCTGGGACTGAACTTTGT+GGG - chr8_2:8097286-8097305 Msa1231840:intron 40.0%
TTTGTGGGAGGAACATTAAG+AGG - chr8_2:8097301-8097320 Msa1231840:intron 40.0%
! AGAGGAAGTATGATGACAAG+GGG - chr8_2:8097319-8097338 Msa1231840:intron 40.0%
GATTGTCAAGAGTTGAAGAG+TGG - chr8_2:8097423-8097442 Msa1231840:intron 40.0%
CAACTCATCTTGCTCACTAT+TGG + chr8_2:8097466-8097485 None:intergenic 40.0%
CAATAGTGAGCAAGATGAGT+TGG - chr8_2:8097464-8097483 Msa1231840:CDS 40.0%
GAATGTGGATCGAATTCTAG+CGG - chr8_2:8097516-8097535 Msa1231840:CDS 40.0%
AATGTGGATCGAATTCTAGC+GGG - chr8_2:8097517-8097536 Msa1231840:CDS 40.0%
GATACAGACGCAACATATTC+GGG + chr8_2:8097573-8097592 None:intergenic 40.0%
ATATGTTGCGTCTGTATCAG+TGG - chr8_2:8097575-8097594 Msa1231840:intron 40.0%
TAGATTCGATACCACCTACA+TGG - chr8_2:8097647-8097666 Msa1231840:intron 40.0%
AGACACACTACAGACACATT+TGG - chr8_2:8097728-8097747 Msa1231840:intron 40.0%
! ACAGACACATTTGGAGGTTT+TGG - chr8_2:8097737-8097756 Msa1231840:intron 40.0%
CAGAAGAGATACATCGAAGT+CGG + chr8_2:8097810-8097829 None:intergenic 40.0%
TTCTGTGAAGCCAATTGCAA+TGG - chr8_2:8097973-8097992 Msa1231840:intron 40.0%
ATTGAAGAAAGCCAGCCATT+TGG - chr8_2:8098206-8098225 Msa1231840:CDS 40.0%
TTGGCATTAATCTGAAGAGC+CGG - chr8_2:8098321-8098340 Msa1231840:five_prime_UTR 40.0%
! TCTTTGGTCTTCTGTACAGT+TGG - chr8_2:8098354-8098373 Msa1231840:five_prime_UTR 40.0%
!! GTTGGCGATTTTTGTTTGTG+TGG - chr8_2:8098372-8098391 Msa1231840:five_prime_UTR 40.0%
AGATTGAGATAGGGAAAGGA+GGG - chr8_2:8098502-8098521 Msa1231840:five_prime_UTR 40.0%
AGTGATTGTTGTACTTTCCG+AGG - chr8_2:8098570-8098589 Msa1231840:five_prime_UTR 40.0%
! GACTAGGTTGAGATCATCAT+AGG + chr8_2:8098612-8098631 None:intergenic 40.0%
ATCTGAAGAGGGAAAAGGGA+AGG + chr8_2:8093934-8093953 None:intergenic 45.0%
AGGGATCTGAAGAGGGAAAA+GGG + chr8_2:8093938-8093957 None:intergenic 45.0%
AAGGGATCTGAAGAGGGAAA+AGG + chr8_2:8093939-8093958 None:intergenic 45.0%
GGATGAAAAGGGATCTGAAG+AGG + chr8_2:8093946-8093965 None:intergenic 45.0%
!! GAGATCATGGGTAGTTCTGA+AGG - chr8_2:8094226-8094245 Msa1231840:three_prime_UTR 45.0%
!! ATGGGTAGTTCTGAAGGGTT+GGG - chr8_2:8094232-8094251 Msa1231840:three_prime_UTR 45.0%
! GTCGCAGTTTCTCGTTGATT+CGG - chr8_2:8094465-8094484 Msa1231840:intron 45.0%
!! TCGCAGTTTCTCGTTGATTC+GGG - chr8_2:8094466-8094485 Msa1231840:intron 45.0%
GGTTCTTCATAGACTTGGAC+AGG - chr8_2:8094528-8094547 Msa1231840:three_prime_UTR 45.0%
TGGTAACTTAGGGATGTAGG+GGG - chr8_2:8094683-8094702 Msa1231840:CDS 45.0%
AGGGATGTAGGGGGTAAATA+TGG - chr8_2:8094692-8094711 Msa1231840:CDS 45.0%
AGGGTACACTGATCAAATGG+TGG - chr8_2:8095012-8095031 Msa1231840:CDS 45.0%
AAGATGTGCAGGTCAAGCAT+GGG + chr8_2:8095100-8095119 None:intergenic 45.0%
CTACACGTTCCATGATATCC+TGG - chr8_2:8095489-8095508 Msa1231840:CDS 45.0%
TAACTTCATCCATGCTAGCC+AGG + chr8_2:8095510-8095529 None:intergenic 45.0%
TACTGAACTGCAACCAGTTC+CGG - chr8_2:8095528-8095547 Msa1231840:CDS 45.0%
ACAACCACCTGGATGAAAAG+GGG - chr8_2:8095683-8095702 Msa1231840:CDS 45.0%
TCTGTCTTTCGAGCAGGAAT+TGG - chr8_2:8096043-8096062 Msa1231840:CDS 45.0%
! ACTCCGGTGCTTGAAGTTTT+GGG - chr8_2:8096294-8096313 Msa1231840:intron 45.0%
!!! AAGTTTTGGGCCAAAAGACG+AGG - chr8_2:8096307-8096326 Msa1231840:intron 45.0%
! TTTCAGGTGACAGGTTTCCT+CGG - chr8_2:8096439-8096458 Msa1231840:CDS 45.0%
! TTTCCTCGGTGGTGTTAACT+GGG - chr8_2:8096453-8096472 Msa1231840:CDS 45.0%
AGCATGCTTGGAACTGCATT+TGG + chr8_2:8096511-8096530 None:intergenic 45.0%
AATCGAGAGACAAGCATGCT+TGG + chr8_2:8096523-8096542 None:intergenic 45.0%
TTAGGGTGTATACACAGTGG+CGG - chr8_2:8096545-8096564 Msa1231840:intron 45.0%
GGATATGCGGGAGTTATGAT+TGG + chr8_2:8096670-8096689 None:intergenic 45.0%
GAATTCATGCACGGATATGC+GGG + chr8_2:8096682-8096701 None:intergenic 45.0%
!! ATGTTGATGACTTGCGTGCT+TGG - chr8_2:8096875-8096894 Msa1231840:intron 45.0%
TATACTCCCGAGGATAAGGA+TGG + chr8_2:8096975-8096994 None:intergenic 45.0%
TTCCGCGTATATCAAACTGC+TGG + chr8_2:8097077-8097096 None:intergenic 45.0%
! GCGGAACTGTTGAAGCATTT+CGG - chr8_2:8097091-8097110 Msa1231840:intron 45.0%
GAAACATGAATGTCCATCCC+AGG + chr8_2:8097147-8097166 None:intergenic 45.0%
AGCAAGGGATTTGCCTTCTA+CGG + chr8_2:8097176-8097195 None:intergenic 45.0%
CCATCAGGAAACACATAGCA+AGG + chr8_2:8097192-8097211 None:intergenic 45.0%
! CCTTGCTATGTGTTTCCTGA+TGG - chr8_2:8097189-8097208 Msa1231840:CDS 45.0%
ACTGGTACTGTTGACCTTGA+TGG + chr8_2:8097231-8097250 None:intergenic 45.0%
ATCAAGGTCAACAGTACCAG+TGG - chr8_2:8097230-8097249 Msa1231840:intron 45.0%
! GATTTTGGACGATTCTCCAC+TGG + chr8_2:8097249-8097268 None:intergenic 45.0%
!! GTTTCTGGGACTGAACTTTG+TGG - chr8_2:8097285-8097304 Msa1231840:intron 45.0%
! GAGGAAGTATGATGACAAGG+GGG - chr8_2:8097320-8097339 Msa1231840:intron 45.0%
AGAAGAATGTCTCCAGAAGC+TGG - chr8_2:8097489-8097508 Msa1231840:CDS 45.0%
GAAGAATGTCTCCAGAAGCT+GGG - chr8_2:8097490-8097509 Msa1231840:CDS 45.0%
ATGTGGATCGAATTCTAGCG+GGG - chr8_2:8097518-8097537 Msa1231840:CDS 45.0%
ACATCTGTTTCGAGCGAAGA+TGG - chr8_2:8097543-8097562 Msa1231840:CDS 45.0%
!! GTATGTTGATGATAGCGCCA+GGG - chr8_2:8097602-8097621 Msa1231840:intron 45.0%
TACAGAATCTGCCATGTAGG+TGG + chr8_2:8097661-8097680 None:intergenic 45.0%
CACACTACAGACACATTTGG+AGG - chr8_2:8097731-8097750 Msa1231840:intron 45.0%
TAAAGGGACACTAGTGCATG+TGG - chr8_2:8097836-8097855 Msa1231840:intron 45.0%
CTTCACAGAACCGGCAAAAA+AGG + chr8_2:8097963-8097982 None:intergenic 45.0%
! TGCAATTGGCTTCACAGAAC+CGG + chr8_2:8097972-8097991 None:intergenic 45.0%
TGAAGCCAATTGCAATGGCA+GGG - chr8_2:8097978-8097997 Msa1231840:intron 45.0%
AACATCCCTGCCATTGCAAT+TGG + chr8_2:8097986-8098005 None:intergenic 45.0%
TAGGTGATGCAAGCTTGGTT+TGG + chr8_2:8098291-8098310 None:intergenic 45.0%
AACCAAGCTTGCATCACCTA+TGG - chr8_2:8098291-8098310 Msa1231840:CDS 45.0%
ACCAAGCTTGCATCACCTAT+GGG - chr8_2:8098292-8098311 Msa1231840:CDS 45.0%
TAATGCCAATCAGTCCCCAT+AGG + chr8_2:8098310-8098329 None:intergenic 45.0%
TGGCATTAATCTGAAGAGCC+GGG - chr8_2:8098322-8098341 Msa1231840:five_prime_UTR 45.0%
GAGATTGAGATAGGGAAAGG+AGG - chr8_2:8098501-8098520 Msa1231840:five_prime_UTR 45.0%
GAAGAGGGAAAAGGGAAGGA+GGG + chr8_2:8093930-8093949 None:intergenic 50.0%
TGAAGAGGGAAAAGGGAAGG+AGG + chr8_2:8093931-8093950 None:intergenic 50.0%
!! CATGGGTAGTTCTGAAGGGT+TGG - chr8_2:8094231-8094250 Msa1231840:three_prime_UTR 50.0%
GCTGTGCCGGAGAAACAATA+TGG - chr8_2:8094289-8094308 Msa1231840:three_prime_UTR 50.0%
!! CTGGTCCAACAAGTGCTGAT+AGG - chr8_2:8094335-8094354 Msa1231840:three_prime_UTR 50.0%
!! CGCAGTTTCTCGTTGATTCG+GGG - chr8_2:8094467-8094486 Msa1231840:intron 50.0%
TTCGGGGTTGTATGAGAGCA+AGG - chr8_2:8094483-8094502 Msa1231840:three_prime_UTR 50.0%
GTTGTATGAGAGCAAGGAGG+AGG - chr8_2:8094489-8094508 Msa1231840:three_prime_UTR 50.0%
AAGCACCTTACTCGCCTGAA+AGG - chr8_2:8094992-8095011 Msa1231840:CDS 50.0%
AGCACCTTACTCGCCTGAAA+GGG - chr8_2:8094993-8095012 Msa1231840:CDS 50.0%
TGTACCCTTTCAGGCGAGTA+AGG + chr8_2:8095000-8095019 None:intergenic 50.0%
AGATGTGCAGGTCAAGCATG+GGG + chr8_2:8095099-8095118 None:intergenic 50.0%
GAAGATGTGCAGGTCAAGCA+TGG + chr8_2:8095101-8095120 None:intergenic 50.0%
ATGATGCAGGTTCATGGACC+TGG - chr8_2:8095319-8095338 Msa1231840:CDS 50.0%
ATCTACCTCGCGGTTCACAT+AGG + chr8_2:8095377-8095396 None:intergenic 50.0%
CCATGCTAGCCAGGATATCA+TGG + chr8_2:8095501-8095520 None:intergenic 50.0%
CCATGATATCCTGGCTAGCA+TGG - chr8_2:8095498-8095517 Msa1231840:CDS 50.0%
ATAACTGGGACATGAGCGTC+CGG + chr8_2:8095550-8095569 None:intergenic 50.0%
! ATGGTTGCCCCTTTTCATCC+AGG + chr8_2:8095693-8095712 None:intergenic 50.0%
GATGTGACTAGGGCAGAGTA+TGG + chr8_2:8095712-8095731 None:intergenic 50.0%
! CACTCCGGTGCTTGAAGTTT+TGG - chr8_2:8096293-8096312 Msa1231840:intron 50.0%
TGGCCCAAAACTTCAAGCAC+CGG + chr8_2:8096300-8096319 None:intergenic 50.0%
! GTTTCCTCGGTGGTGTTAAC+TGG - chr8_2:8096452-8096471 Msa1231840:CDS 50.0%
TCGATAGAGGAGAACGAGCT+TGG - chr8_2:8096592-8096611 Msa1231840:intron 50.0%
CGATAGAGGAGAACGAGCTT+GGG - chr8_2:8096593-8096612 Msa1231840:intron 50.0%
! ACGAGCTTGGGTTTTCTGTG+TGG - chr8_2:8096605-8096624 Msa1231840:intron 50.0%
CGATCACGGGGATTTCTAAG+AGG + chr8_2:8096634-8096653 None:intergenic 50.0%
! GATGACTTGCGTGCTTGGAA+AGG - chr8_2:8096880-8096899 Msa1231840:intron 50.0%
ACTTGCGTGCTTGGAAAGGT+TGG - chr8_2:8096884-8096903 Msa1231840:intron 50.0%
CTTGCGTGCTTGGAAAGGTT+GGG - chr8_2:8096885-8096904 Msa1231840:intron 50.0%
TCATCAAAGTCAGCTGCCGA+AGG + chr8_2:8096921-8096940 None:intergenic 50.0%
TGCAGTGCCATCCTTATCCT+CGG - chr8_2:8096965-8096984 Msa1231840:CDS 50.0%
CTTTCTTCATGGGCTTGCAG+AGG - chr8_2:8097025-8097044 Msa1231840:CDS 50.0%
ATGGGCTTGCAGAGGAAACA+GGG - chr8_2:8097033-8097052 Msa1231840:CDS 50.0%
GGCCAGCAGTTTGATATACG+CGG - chr8_2:8097072-8097091 Msa1231840:intron 50.0%
!! CATGTTCTGGAAACCTGGGA+TGG - chr8_2:8097131-8097150 Msa1231840:intron 50.0%
ACATTGCGCCAATCCTTCTG+CGG - chr8_2:8097368-8097387 Msa1231840:intron 50.0%
TTGCGTCTGTATCAGTGGCA+GGG - chr8_2:8097580-8097599 Msa1231840:intron 50.0%
!! GGTATGTTGATGATAGCGCC+AGG - chr8_2:8097601-8097620 Msa1231840:intron 50.0%
GTGAAGCCAATTGCAATGGC+AGG - chr8_2:8097977-8097996 Msa1231840:intron 50.0%
CCAAGCTTGCATCACCTATG+GGG - chr8_2:8098293-8098312 Msa1231840:CDS 50.0%
CATCACCTATGGGGACTGAT+TGG - chr8_2:8098302-8098321 Msa1231840:exon 50.0%
GGCATTAATCTGAAGAGCCG+GGG - chr8_2:8098323-8098342 Msa1231840:five_prime_UTR 50.0%
GACCAAAGAAAGTCATGCCC+CGG + chr8_2:8098343-8098362 None:intergenic 50.0%
TGAGATAGGGAAAGGAGGGT+AGG - chr8_2:8098506-8098525 Msa1231840:five_prime_UTR 50.0%
GAGATAGGGAAAGGAGGGTA+GGG - chr8_2:8098507-8098526 Msa1231840:five_prime_UTR 50.0%
AGATAGGGAAAGGAGGGTAG+GGG - chr8_2:8098508-8098527 Msa1231840:five_prime_UTR 50.0%
! AGGGAACAAAAGCGCGATCG+TGG + chr8_2:8093911-8093930 None:intergenic 55.0%
GCCTGCGAATTCTTCTTCGC+AGG - chr8_2:8094267-8094286 Msa1231840:three_prime_UTR 55.0%
GCCTGCGAAGAAGAATTCGC+AGG + chr8_2:8094271-8094290 None:intergenic 55.0%
TTCTTCTTCGCAGGCTGTGC+CGG - chr8_2:8094276-8094295 Msa1231840:three_prime_UTR 55.0%
GGGGTTGTATGAGAGCAAGG+AGG - chr8_2:8094486-8094505 Msa1231840:three_prime_UTR 55.0%
CAAGGAGGAGGCTGACAAGA+GGG - chr8_2:8094501-8094520 Msa1231840:three_prime_UTR 55.0%
! AGTGTATCCAAGTCGGCTCC+AGG + chr8_2:8095340-8095359 None:intergenic 55.0%
ACCTCGCGGTTCACATAGGA+TGG + chr8_2:8095373-8095392 None:intergenic 55.0%
GTGGCAGGATATCTACCTCG+CGG + chr8_2:8095387-8095406 None:intergenic 55.0%
! GTTGCCCCTTTTCATCCAGG+TGG + chr8_2:8095690-8095709 None:intergenic 55.0%
TTGCCCAGTTAACACCACCG+AGG + chr8_2:8096459-8096478 None:intergenic 55.0%
GTTGGGTGGAATCACGCCTT+CGG - chr8_2:8096902-8096921 Msa1231840:intron 55.0%
GCAGTGCCATCCTTATCCTC+GGG - chr8_2:8096966-8096985 Msa1231840:CDS 55.0%
CATGGGCTTGCAGAGGAAAC+AGG - chr8_2:8097032-8097051 Msa1231840:CDS 55.0%
TGGGCTTGCAGAGGAAACAG+GGG - chr8_2:8097034-8097053 Msa1231840:CDS 55.0%
CAGGGGGAGGTTGTTCAAGA+AGG - chr8_2:8097051-8097070 Msa1231840:intron 55.0%
CTGGGACTGAACTTTGTGGG+AGG - chr8_2:8097289-8097308 Msa1231840:intron 55.0%
TGATGACAAGGGGGTGAAGC+AGG - chr8_2:8097329-8097348 Msa1231840:intron 55.0%
CAAGCTCTCCGCAGAAGGAT+TGG + chr8_2:8097379-8097398 None:intergenic 55.0%
GTTGTCAAGCTCTCCGCAGA+AGG + chr8_2:8097384-8097403 None:intergenic 55.0%
TCTGCGGAGAGCTTGACAAC+TGG - chr8_2:8097384-8097403 Msa1231840:intron 55.0%
CCACATTCAGTCCCAGCTTC+TGG + chr8_2:8097504-8097523 None:intergenic 55.0%
CCAGAAGCTGGGACTGAATG+TGG - chr8_2:8097501-8097520 Msa1231840:CDS 55.0%
GTTGCGTCTGTATCAGTGGC+AGG - chr8_2:8097579-8097598 Msa1231840:intron 55.0%
GTTCATTGCCTCAACAGCCC+TGG + chr8_2:8097622-8097641 None:intergenic 55.0%
CCCCATAGGTGATGCAAGCT+TGG + chr8_2:8098296-8098315 None:intergenic 55.0%
AGCCGGGGCATGACTTTCTT+TGG - chr8_2:8098338-8098357 Msa1231840:five_prime_UTR 55.0%
GATAGGGAAAGGAGGGTAGG+GGG - chr8_2:8098509-8098528 Msa1231840:five_prime_UTR 55.0%
GCAAGGAGGAGGCTGACAAG+AGG - chr8_2:8094500-8094519 Msa1231840:three_prime_UTR 60.0%
GGAGGCTGACAAGAGGGAAG+AGG - chr8_2:8094507-8094526 Msa1231840:three_prime_UTR 60.0%
TCATGGACCTGGAGCCGACT+TGG - chr8_2:8095330-8095349 Msa1231840:CDS 60.0%
GCCATCCTATGTGAACCGCG+AGG - chr8_2:8095369-8095388 Msa1231840:CDS 60.0%
CAGGTGACAGGTTTCCTCGG+TGG - chr8_2:8096442-8096461 Msa1231840:CDS 60.0%
GGGTGTATACACAGTGGCGG+TGG - chr8_2:8096548-8096567 Msa1231840:intron 60.0%
GCGTGCTTGGAAAGGTTGGG+TGG - chr8_2:8096888-8096907 Msa1231840:intron 60.0%
GGGCTTGCAGAGGAAACAGG+GGG - chr8_2:8097035-8097054 Msa1231840:CDS 60.0%
CTTGCAGAGGAAACAGGGGG+AGG - chr8_2:8097038-8097057 Msa1231840:CDS 60.0%
! TGATAGCGCCAGGGCTGTTG+AGG - chr8_2:8097611-8097630 Msa1231840:intron 60.0%
GGGACATGAGCGTCCGGAAC+TGG + chr8_2:8095544-8095563 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 8093845 8098699 8093845 ID=Msa1231840;Name=Msa1231840
chr8_2 mRNA 8093845 8098699 8093845 ID=Msa1231840-mRNA-1;Parent=Msa1231840;Name=Msa1231840-mRNA-1;_AED=0.12;_eAED=0.12;_QI=387|1|1|1|0.87|0.88|9|700|733
chr8_2 exon 8093845 8094390 8093845 ID=Msa1231840-mRNA-1:exon:3120;Parent=Msa1231840-mRNA-1
chr8_2 exon 8094482 8096099 8094482 ID=Msa1231840-mRNA-1:exon:3119;Parent=Msa1231840-mRNA-1
chr8_2 exon 8096202 8096264 8096202 ID=Msa1231840-mRNA-1:exon:3118;Parent=Msa1231840-mRNA-1
chr8_2 exon 8096372 8096485 8096372 ID=Msa1231840-mRNA-1:exon:3117;Parent=Msa1231840-mRNA-1
chr8_2 exon 8096905 8097066 8096905 ID=Msa1231840-mRNA-1:exon:3116;Parent=Msa1231840-mRNA-1
chr8_2 exon 8097154 8097216 8097154 ID=Msa1231840-mRNA-1:exon:3115;Parent=Msa1231840-mRNA-1
chr8_2 exon 8097463 8097570 8097463 ID=Msa1231840-mRNA-1:exon:3114;Parent=Msa1231840-mRNA-1
chr8_2 exon 8097995 8098072 8097995 ID=Msa1231840-mRNA-1:exon:3113;Parent=Msa1231840-mRNA-1
chr8_2 exon 8098163 8098699 8098163 ID=Msa1231840-mRNA-1:exon:3112;Parent=Msa1231840-mRNA-1
chr8_2 five_prime_UTR 8098313 8098699 8098313 ID=Msa1231840-mRNA-1:five_prime_utr;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8098163 8098312 8098163 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8097995 8098072 8097995 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8097463 8097570 8097463 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8097154 8097216 8097154 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8096905 8097066 8096905 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8096372 8096485 8096372 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8096202 8096264 8096202 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 CDS 8094636 8096099 8094636 ID=Msa1231840-mRNA-1:cds;Parent=Msa1231840-mRNA-1
chr8_2 three_prime_UTR 8094482 8094635 8094482 ID=Msa1231840-mRNA-1:three_prime_utr;Parent=Msa1231840-mRNA-1
chr8_2 three_prime_UTR 8093845 8094390 8093845 ID=Msa1231840-mRNA-1:three_prime_utr;Parent=Msa1231840-mRNA-1
Gene Sequence

>Msa1231840

ATGGGTAGTTCTGAAGGGTTGGGAGCATCATCAAAGCCTGCGAATTCTTCTTCGCAGGCTGTGCCGGAGAAACAATATGGTGTCACAAAGGCTATTTCAATGGCTGGTCCAACAAGTGCTGATAGGAAAAGGACTCAACAATTGGAGAAGTTTCTCGTTGATTCGGGGTTGTATGAGAGCAAGGAGGAGGCTGACAAGAGGGAAGAGGTTCTTCATAGACTTGGACAGATAGTAAAAAGTTGGGTAAAGCACCTTACTCGCCTGAAAGGGTACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATTCTCACATTTGGTTCTTATCGTCTTGGTGTTCATGGACCTGGAGCCGACTTGGATACACTGTGTATTGGGCCATCCTATGTGAACCGCGAGGAGGATTTTTTCTACACGTTCCATGATATCCTGGCTAGCATGGATGAAGTTACTGAACTGCAACCAGTTCCGGACGCTCATGTCCCAGTTATGAAGTTCAAGTTTGATGGAATTTCGATCGACCTTCTTTATGCAAGTATTTCTTGCTTGATTGTACCTGAAGAATTGGATATATCTGATGTCTCTGTTCTACATAATATTGATGAGCCTACTGTTCGAAGTTTGAATGGTTGTAGAGTTGCAGATCAAATTCTAAAGCTTGTTCCAAATATTGAGTACTTTCGAACAACACTCCGGTGCTTGAAGTTTTGGGCCAAAAGACGAGGTGTTTATTCCAATGTGACAGGTTTCCTCGGTGGTGTTAACTGGGCAATTCTTGTAGCTCGAGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTGTATACACAGTGGCGGTGGCCAAATCCTGTCATGTTATGTTCGATAGAGGAGAACGAGCTTGGGTTTTCTGTGTGGCATCCTCTTAGAAATCCCCGTGATCGATCTCATCTTATGCCAATCATAACTCCCGCATATCCGTGCATGAATTCAAGTTATAATGTTTCTGCAAGCACACTTCGAGTTATGATGGAGCAGTTCCAATATGGCAACAAAATCTGTGAGGATATTGAACTGAATAAAGTCGGCTGGAGTGCTCTGTTTGTACCATATGTTTTCTTTGAAGGCTACAAAAACTTTCTGCAAATTGATGTAGTTGCTGCTGATGTTGATGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGGCAGCTGACTTTGATGATTGAGCGTGATACTATTGGGAAGTTGCAGTGCCATCCTTATCCTCGGGAGTATATTGATGATACAAGGAAATGTTCACATAGTGCTTTCTTCATGGGCTTGCAGAGGAAACAGGGGGAGGTTGTTCAAGAAGGCCAGCAGTTTGATATACGCGGAACTGTTGAAGCATTTCGGCATTCTATTAATATGTACATGTTCTGGAAACCTGGGATGGACATTCATGTTTCACACATCCGTAGAAGGCAAATCCCTTGCTATGTGTTTCCTGATGGTTTTAAACGATCTCGACCATCAAGGTCAACAGTACCAGTGGAGAATCGTCCAAAATCACTTCAAGAAAATGAGGTTTCTGGGACTGAACTTTGTGGGAGGAACATTAAGAGGAAGTATGATGACAAGGGGGTGAAGCAGGATGTTGTACTGAAAAAACATTGCGCCAATCCTTCTGCGGAGAGCTTGACAACTGGCAAGTACGCTGTATCTGATTGTCAAGAGTTGAAGAGTGGTGAGAGTACGAGTTTGACCAATAGTGAGCAAGATGAGTTGGATAGAAGAATGTCTCCAGAAGCTGGGACTGAATGTGGATCGAATTCTAGCGGGGTTACATCTGTTTCGAGCGAAGATGGCTCTCCCGAATATGTTGCGTCTGTATCAGTGGCAGGGTATGTTGATGATAGCGCCAGGGCTGTTGAGGCAATGAACAACAGTAGATTCGATACCACCTACATGGCAGATTCTGTAAAACTTGGAATTGGTACACTGGTCAGTGCAAACAATGAAGTATTACAAGACACACTACAGACACATTTGGAGGTTTTGGCTTTCAATTCCTTTCTCAATTTTTATTTTTTTCTCTTTTTTTTTTTACCGACTTCGATGTATCTCTTCTGTCATCATAAAGGGACACTAGTGCATGTGGCAAAAGCTTTTCTCTTTTCTTTTGTTTTAACTGTCTACTTTTATTGTTAG
Protein sequence

>Msa1231840

MGSSEGLGASSKPANSSSQAVPEKQYGVTKAISMAGPTSADRKRTQQLEKFLVDSGLYESKEEADKREEVLHRLGQIVKSWVKHLTRLKGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTVPVENRPKSLQENEVSGTELCGRNIKRKYDDKGVKQDVVLKKHCANPSAESLTTGKYAVSDCQELKSGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTSVSSEDGSPEYVASVSVAGYVDDSARAVEAMNNSRFDTTYMADSVKLGIGTLVSANNEVLQDTLQTHLEVLAFNSFLNFYFFLFFFLPTSMYLFCHHKGTLVHVAKAFLFSFVLTVYFYC*