AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663220 MtrunA17_Chr4g0011901 94.792 480 25 0 18 497 18 497 0.0 920
Msa0663220 MtrunA17_Chr4g0011961 80.242 496 97 1 1 496 1 495 0.0 815
Msa0663220 MtrunA17_Chr4g0011921 79.192 495 103 0 1 495 1 495 0.0 803
Msa0663220 MtrunA17_Chr4g0011981 80.126 478 95 0 19 496 19 496 0.0 776
Msa0663220 MtrunA17_Chr4g0011881 76.543 486 111 2 13 496 12 496 0.0 741
Msa0663220 MtrunA17_Chr5g0419691 73.589 496 131 0 1 496 1 496 0.0 734
Msa0663220 MtrunA17_Chr4g0011871 73.038 497 133 1 1 496 1 497 0.0 729
Msa0663220 MtrunA17_Chr5g0406651 76.701 485 111 1 14 496 13 497 0.0 723
Msa0663220 MtrunA17_Chr7g0218601 58.642 486 191 4 16 494 15 497 0.0 597
Msa0663220 MtrunA17_Chr7g0218611 60.334 479 183 3 22 494 21 498 0.0 593
Msa0663220 MtrunA17_Chr5g0431501 54.604 467 210 2 30 494 34 500 0.0 536
Msa0663220 MtrunA17_Chr5g0431461 54.604 467 210 2 30 494 34 500 0.0 536
Msa0663220 MtrunA17_Chr1g0156101 53.512 484 212 3 27 497 30 513 0.0 533
Msa0663220 MtrunA17_Chr5g0431511 53.961 467 213 2 30 494 34 500 0.0 532
Msa0663220 MtrunA17_Chr1g0156081 53.306 484 213 4 27 497 54 537 8.62e-175 502
Msa0663220 MtrunA17_Chr4g0011931 83.673 294 48 0 1 294 1 294 2.75e-173 489
Msa0663220 MtrunA17_Chr4g0011861 75.185 270 66 1 26 294 26 295 1.30e-145 419
Msa0663220 MtrunA17_Chr1g0156061 47.872 470 183 4 27 492 53 464 5.49e-145 424
Msa0663220 MtrunA17_Chr4g0047661 42.515 501 276 5 2 493 17 514 2.32e-139 411
Msa0663220 MtrunA17_Chr4g0047631 42.600 500 273 5 1 493 17 509 4.01e-139 410
Msa0663220 MtrunA17_Chr3g0116681 41.498 494 282 5 3 494 13 501 2.49e-138 408
Msa0663220 MtrunA17_Chr4g0047641 43.056 504 266 7 4 493 17 513 1.24e-137 407
Msa0663220 MtrunA17_Chr4g0058231 42.178 505 274 7 1 495 1 497 2.64e-135 400
Msa0663220 MtrunA17_Chr5g0445461 42.363 491 274 5 4 492 13 496 2.28e-134 398
Msa0663220 MtrunA17_Chr3g0101691 42.915 494 270 4 5 492 14 501 4.29e-133 395
Msa0663220 MtrunA17_Chr5g0445381 43.149 489 269 5 6 492 46 527 5.06e-133 395
Msa0663220 MtrunA17_Chr5g0445451 42.159 491 275 5 4 492 13 496 1.42e-131 390
Msa0663220 MtrunA17_Chr6g0472311 41.107 506 279 7 4 493 12 514 1.72e-131 391
Msa0663220 MtrunA17_Chr4g0047691 41.551 503 276 5 2 493 17 512 3.82e-131 390
Msa0663220 MtrunA17_Chr5g0445441 42.770 491 272 5 4 492 54 537 5.41e-131 390
Msa0663220 MtrunA17_Chr4g0058191 40.937 491 282 6 4 493 2 485 7.91e-130 386
Msa0663220 MtrunA17_Chr3g0101711 40.481 499 284 5 5 496 13 505 7.08e-129 384
Msa0663220 MtrunA17_Chr3g0116741 41.057 492 280 5 4 491 26 511 2.44e-128 383
Msa0663220 MtrunA17_Chr4g0058201 40.756 476 278 3 19 493 18 490 2.81e-128 382
Msa0663220 MtrunA17_Chr3g0101731 41.525 472 266 3 28 495 35 500 4.56e-128 382
Msa0663220 MtrunA17_Chr8g0361471 39.959 493 284 4 6 492 11 497 1.50e-126 378
Msa0663220 MtrunA17_Chr5g0445531 42.060 466 262 4 28 492 37 495 1.65e-126 378
Msa0663220 MtrunA17_Chr5g0446161 42.052 497 269 8 4 492 11 496 2.09e-126 377
Msa0663220 MtrunA17_Chr3g0101721 41.127 479 265 4 22 492 30 499 2.12e-126 378
Msa0663220 MtrunA17_Chr5g0431671 41.139 474 267 6 23 492 32 497 4.66e-126 377
Msa0663220 MtrunA17_Chr3g0101701 41.401 471 264 4 28 492 37 501 5.04e-126 377
Msa0663220 MtrunA17_Chr5g0445421 42.308 494 252 8 1 492 87 549 5.70e-126 378
Msa0663220 MtrunA17_Chr5g0403331 42.737 475 256 5 30 495 36 503 6.56e-126 376
Msa0663220 MtrunA17_Chr3g0101631 41.750 503 263 7 7 492 3 492 8.59e-126 376
Msa0663220 MtrunA17_Chr5g0431641 40.574 488 281 5 7 492 16 496 1.41e-125 375
Msa0663220 MtrunA17_Chr5g0403321 40.862 487 273 4 19 495 24 505 5.58e-125 374
Msa0663220 MtrunA17_Chr6g0466331 39.351 493 287 4 6 492 11 497 5.89e-125 374
Msa0663220 MtrunA17_Chr6g0465511 39.351 493 287 4 6 492 11 497 6.63e-125 374
Msa0663220 MtrunA17_Chr4g0058261 41.300 477 270 5 22 491 55 528 6.98e-125 375
Msa0663220 MtrunA17_Chr3g0101651 40.688 494 281 4 5 492 14 501 1.02e-124 373
Msa0663220 MtrunA17_Chr4g0024771 40.081 494 284 6 1 492 13 496 3.14e-124 372
Msa0663220 MtrunA17_Chr3g0101671 38.866 494 289 5 6 492 14 501 4.83e-123 369
Msa0663220 MtrunA17_Chr4g0058281 40.726 496 283 7 3 491 18 509 5.75e-123 369
Msa0663220 MtrunA17_Chr5g0403351 39.286 504 287 6 1 495 9 502 1.78e-122 367
Msa0663220 MtrunA17_Chr3g0101661 38.945 493 290 4 5 492 14 500 3.92e-122 367
Msa0663220 MtrunA17_Chr2g0310391 38.037 489 296 4 5 489 1 486 4.17e-122 366
Msa0663220 MtrunA17_Chr5g0446151 40.977 471 265 5 25 492 37 497 4.48e-122 366
Msa0663220 MtrunA17_Chr3g0101611 40.592 473 269 4 25 492 34 499 2.40e-121 365
Msa0663220 MtrunA17_Chr3g0101581 38.384 495 297 4 1 492 9 498 3.92e-121 364
Msa0663220 MtrunA17_Chr3g0101571 38.936 470 277 4 26 492 33 495 1.91e-120 362
Msa0663220 MtrunA17_Chr4g0011941 84.500 200 31 0 297 496 1 200 3.62e-120 350
Msa0663220 MtrunA17_Chr3g0101601 41.929 477 257 7 23 492 30 493 4.36e-120 361
Msa0663220 MtrunA17_Chr3g0101811 39.715 491 272 4 20 492 28 512 2.00e-119 360
Msa0663220 MtrunA17_Chr4g0020041 39.718 496 287 4 6 496 14 502 2.51e-119 359
Msa0663220 MtrunA17_Chr2g0310381 37.219 489 305 2 4 492 3 489 2.59e-119 359
Msa0663220 MtrunA17_Chr1g0162801 40.644 497 282 5 6 496 14 503 2.12e-118 357
Msa0663220 MtrunA17_Chr3g0101621 41.772 474 259 6 23 492 27 487 3.29e-118 356
Msa0663220 MtrunA17_Chr3g0101751 41.015 473 268 3 28 495 41 507 6.80e-118 356
Msa0663220 MtrunA17_Chr4g0076161 41.434 502 265 10 5 492 13 499 8.35e-118 355
Msa0663220 MtrunA17_Chr1g0162811 39.721 501 285 6 5 496 8 500 1.32e-117 355
Msa0663220 MtrunA17_Chr6g0463801 40.717 474 272 5 20 492 28 493 1.37e-117 355
Msa0663220 MtrunA17_Chr1g0167321 42.346 503 265 6 6 496 11 500 2.42e-116 352
Msa0663220 MtrunA17_Chr3g0101821 40.157 508 269 6 7 491 1 496 3.55e-116 351
Msa0663220 MtrunA17_Chr3g0101801 39.718 496 288 4 2 492 15 504 1.17e-115 350
Msa0663220 MtrunA17_Chr3g0101761 40.800 500 283 5 2 495 8 500 2.52e-115 349
Msa0663220 MtrunA17_Chr8g0382901 38.046 481 293 4 12 492 475 950 3.12e-115 362
Msa0663220 MtrunA17_Chr8g0382901 37.113 485 283 5 9 492 8 471 7.03e-108 342
Msa0663220 MtrunA17_Chr4g0011851 76.329 207 49 0 290 496 9 215 4.65e-113 333
Msa0663220 MtrunA17_Chr3g0101831 40.966 476 271 3 20 491 28 497 1.53e-112 342
Msa0663220 MtrunA17_Chr6g0484841 37.603 484 286 7 18 492 24 500 1.46e-111 340
Msa0663220 MtrunA17_Chr6g0484811 37.397 484 288 7 2 476 8 485 5.03e-111 338
Msa0663220 MtrunA17_Chr8g0357421 41.300 477 271 3 22 495 30 500 7.19e-111 338
Msa0663220 MtrunA17_Chr6g0463791 42.827 474 246 11 30 492 36 495 4.43e-110 335
Msa0663220 MtrunA17_Chr8g0344181 37.975 474 281 7 28 494 37 504 2.75e-109 334
Msa0663220 MtrunA17_Chr2g0280261 40.592 473 266 4 24 492 29 490 3.32e-109 333
Msa0663220 MtrunA17_Chr5g0405001 37.052 502 295 10 3 492 17 509 4.40e-109 333
Msa0663220 MtrunA17_Chr8g0357431 40.377 478 275 3 22 495 30 501 6.92e-108 330
Msa0663220 MtrunA17_Chr5g0430031 39.337 483 279 8 18 492 24 500 2.89e-107 328
Msa0663220 MtrunA17_Chr5g0430101 38.821 492 279 9 1 482 8 487 8.41e-107 327
Msa0663220 MtrunA17_Chr8g0344151 36.709 474 287 7 28 494 35 502 1.12e-106 327
Msa0663220 MtrunA17_Chr5g0430131 40.169 473 268 8 18 482 24 489 1.42e-106 327
Msa0663220 MtrunA17_Chr3g0094231 37.313 469 282 9 25 489 32 492 2.13e-106 326
Msa0663220 MtrunA17_Chr4g0035921 35.211 497 293 11 5 482 13 499 8.06e-106 325
Msa0663220 MtrunA17_Chr3g0101741 39.019 428 248 4 67 492 3 419 9.38e-104 317
Msa0663220 MtrunA17_Chr3g0086651 36.290 496 305 4 8 494 11 504 1.63e-103 319
Msa0663220 MtrunA17_Chr3g0094171 37.687 467 283 5 30 492 41 503 2.91e-103 318
Msa0663220 MtrunA17_Chr8g0372251 37.474 483 281 9 22 492 28 501 4.81e-103 318
Msa0663220 MtrunA17_Chr3g0086661 36.273 499 307 4 5 494 8 504 1.38e-102 317
Msa0663220 MtrunA17_Chr5g0430081 36.831 486 290 7 7 482 10 488 3.81e-101 313
Msa0663220 MtrunA17_Chr7g0254641 35.967 481 292 8 27 494 35 512 5.50e-101 313
Msa0663220 MtrunA17_Chr4g0057001 35.625 480 299 6 16 492 37 509 2.58e-100 311
Msa0663220 MtrunA17_Chr8g0390881 35.366 492 300 8 2 482 6 490 2.87e-100 310
Msa0663220 MtrunA17_Chr8g0344191 36.673 499 294 11 8 492 44 534 4.10e-100 311
Msa0663220 MtrunA17_Chr3g0086691 36.596 470 279 7 38 494 41 504 2.94e-99 308
Msa0663220 MtrunA17_Chr4g0061381 35.991 464 278 7 38 489 40 496 2.94e-99 308
Msa0663220 MtrunA17_Chr5g0430091 37.006 481 289 6 1 474 9 482 3.37e-99 308
Msa0663220 MtrunA17_Chr5g0395331 36.105 457 284 5 22 474 30 482 3.74e-98 305
Msa0663220 MtrunA17_Chr7g0255531 33.399 506 308 9 4 493 1 493 8.40e-98 304
Msa0663220 MtrunA17_Chr1g0205361 34.141 495 318 5 5 496 8 497 2.60e-97 303
Msa0663220 MtrunA17_Chr5g0401681 37.349 498 289 9 5 495 8 489 9.74e-97 301
Msa0663220 MtrunA17_Chr7g0246221 34.969 489 302 7 5 482 6 489 5.49e-96 299
Msa0663220 MtrunA17_Chr1g0160851 33.333 492 318 6 5 492 8 493 1.12e-95 298
Msa0663220 MtrunA17_Chr1g0174461 33.811 488 310 7 2 479 8 492 5.20e-95 297
Msa0663220 MtrunA17_Chr1g0164211 34.947 475 301 5 19 492 23 490 5.92e-95 296
Msa0663220 MtrunA17_Chr1g0174441 34.183 471 295 8 5 464 31 497 1.37e-94 296
Msa0663220 MtrunA17_Chr5g0395321 33.895 475 297 6 4 474 14 475 1.85e-94 296
Msa0663220 MtrunA17_Chr1g0205371 35.700 493 308 6 4 492 7 494 4.91e-94 294
Msa0663220 MtrunA17_Chr8g0356001 33.535 495 317 7 6 492 12 502 1.06e-93 293
Msa0663220 MtrunA17_Chr2g0314731 34.792 480 301 8 2 477 5 476 3.73e-93 291
Msa0663220 MtrunA17_Chr1g0174481 33.194 479 304 7 21 492 26 495 1.03e-92 291
Msa0663220 MtrunA17_Chr3g0084921 34.585 506 305 9 4 492 10 506 2.07e-92 290
Msa0663220 MtrunA17_Chr4g0046631 34.845 485 297 9 20 492 36 513 8.44e-92 289
Msa0663220 MtrunA17_Chr1g0200961 35.294 493 309 6 5 492 6 493 4.76e-91 286
Msa0663220 MtrunA17_Chr2g0314721 35.193 466 293 5 7 467 18 479 6.26e-91 286
Msa0663220 MtrunA17_Chr1g0174451 31.983 469 308 5 4 464 11 476 1.18e-90 286
Msa0663220 MtrunA17_Chr4g0030701 34.350 492 298 9 21 492 27 513 1.19e-90 286
Msa0663220 MtrunA17_Chr5g0401691 35.000 480 290 11 1 476 26 487 5.13e-89 281
Msa0663220 MtrunA17_Chr5g0395381 33.053 475 276 7 4 474 14 450 1.03e-88 280
Msa0663220 MtrunA17_Chr1g0174471 33.533 501 309 13 5 492 27 516 8.62e-88 279
Msa0663220 MtrunA17_Chr7g0265611 34.310 478 304 7 25 495 42 516 1.03e-87 278
Msa0663220 MtrunA17_Chr1g0176831 33.047 466 306 5 4 467 37 498 1.52e-87 278
Msa0663220 MtrunA17_Chr7g0246151 34.146 492 301 10 5 482 6 488 2.10e-87 277
Msa0663220 MtrunA17_Chr7g0258221 33.400 503 319 9 4 497 9 504 1.70e-86 275
Msa0663220 MtrunA17_Chr4g0039901 33.750 480 299 4 23 494 29 497 1.95e-86 275
Msa0663220 MtrunA17_Chr4g0056951 35.258 485 302 7 12 492 28 504 4.05e-86 274
Msa0663220 MtrunA17_Chr1g0207841 32.391 460 292 6 50 492 58 515 4.69e-86 274
Msa0663220 MtrunA17_Chr1g0213671 34.560 489 306 8 14 492 19 503 5.06e-86 274
Msa0663220 MtrunA17_Chr7g0246121 34.735 452 290 5 40 489 45 493 1.12e-85 273
Msa0663220 MtrunA17_Chr5g0431591 40.439 319 183 3 176 492 1 314 1.41e-85 266
Msa0663220 MtrunA17_Chr6g0451751 34.638 511 307 12 4 494 17 520 1.41e-85 273
Msa0663220 MtrunA17_Chr7g0246131 33.811 488 310 6 5 482 6 490 2.15e-85 272
Msa0663220 MtrunA17_Chr7g0235551 33.758 471 297 8 30 489 34 500 2.48e-85 272
Msa0663220 MtrunA17_Chr8g0355961 33.535 495 315 7 8 492 12 502 2.44e-84 269
Msa0663220 MtrunA17_Chr5g0430111 39.416 411 233 8 18 419 24 427 5.81e-84 266
Msa0663220 MtrunA17_Chr4g0053621 34.911 507 294 13 4 495 8 493 6.36e-84 268
Msa0663220 MtrunA17_Chr4g0030711 32.112 464 290 7 50 492 57 516 7.11e-84 269
Msa0663220 MtrunA17_Chr7g0224551 31.589 516 317 12 1 492 1 504 1.75e-83 267
Msa0663220 MtrunA17_Chr6g0466941 33.858 508 310 12 8 494 12 514 2.12e-83 267
Msa0663220 MtrunA17_Chr6g0451641 34.861 502 295 17 16 494 21 513 4.79e-83 266
Msa0663220 MtrunA17_Chr6g0451691 34.160 524 292 14 9 494 16 524 5.96e-83 266
Msa0663220 MtrunA17_Chr8g0362481 33.824 408 260 5 65 464 1 406 1.12e-82 263
Msa0663220 MtrunA17_Chr6g0451741 33.843 523 302 13 2 494 34 542 1.99e-82 265
Msa0663220 MtrunA17_Chr7g0224561 31.599 519 313 14 1 492 1 504 2.58e-82 264
Msa0663220 MtrunA17_Chr6g0466901 33.597 506 313 10 8 494 12 513 3.96e-82 264
Msa0663220 MtrunA17_Chr2g0304871 34.728 478 294 9 30 494 39 511 4.23e-82 264
Msa0663220 MtrunA17_Chr4g0008101 34.706 510 306 12 7 494 16 520 4.33e-82 264
Msa0663220 MtrunA17_Chr8g0362701 32.308 455 294 8 51 497 56 504 5.30e-81 261
Msa0663220 MtrunA17_Chr8g0339311 34.375 480 294 11 26 489 40 514 5.67e-81 261
Msa0663220 MtrunA17_Chr7g0246181 32.049 493 324 7 5 489 6 495 2.84e-80 258
Msa0663220 MtrunA17_Chr6g0451781 35.714 476 284 9 37 494 82 553 7.00e-80 259
Msa0663220 MtrunA17_Chr7g0258211 34.989 443 268 8 38 467 48 483 7.99e-80 258
Msa0663220 MtrunA17_Chr4g0046321 31.893 486 297 12 29 491 34 508 9.73e-80 258
Msa0663220 MtrunA17_Chr1g0197881 32.017 481 308 11 1 474 4 472 1.73e-79 256
Msa0663220 MtrunA17_Chr2g0296651 34.851 505 303 9 1 495 1 489 1.78e-79 256
Msa0663220 MtrunA17_Chr1g0197871 32.432 481 299 11 5 474 8 473 2.03e-79 256
Msa0663220 MtrunA17_Chr1g0197851 31.950 482 308 11 1 474 4 473 5.10e-79 255
Msa0663220 MtrunA17_Chr4g0052851 35.378 489 285 14 12 495 19 481 2.54e-78 253
Msa0663220 MtrunA17_Chr6g0458561 34.320 507 299 15 8 492 28 522 2.74e-78 254
Msa0663220 MtrunA17_Chr1g0197891 32.218 478 305 11 4 474 8 473 1.51e-77 251
Msa0663220 MtrunA17_Chr8g0339331 32.640 481 296 10 30 492 39 509 2.28e-77 251
Msa0663220 MtrunA17_Chr3g0082701 32.475 505 307 10 17 494 24 521 2.99e-77 251
Msa0663220 MtrunA17_Chr4g0046331 31.418 522 312 15 4 491 1 510 4.76e-77 251
Msa0663220 MtrunA17_Chr8g0351801 32.700 474 289 10 43 492 47 514 5.60e-77 250
Msa0663220 MtrunA17_Chr4g0039391 32.088 455 287 11 50 494 55 497 1.66e-76 249
Msa0663220 MtrunA17_Chr4g0046351 31.510 457 284 10 29 467 34 479 2.06e-76 249
Msa0663220 MtrunA17_Chr4g0052861 32.347 507 310 10 4 495 1 489 2.76e-76 248
Msa0663220 MtrunA17_Chr1g0200951 32.563 476 300 11 32 497 64 528 3.84e-74 243
Msa0663220 MtrunA17_Chr4g0052881 33.745 486 297 9 18 495 22 490 5.45e-74 242
Msa0663220 MtrunA17_Chr4g0017411 34.497 487 290 12 13 495 17 478 5.57e-74 241
Msa0663220 MtrunA17_Chr5g0432751 32.265 468 286 11 30 480 34 487 1.11e-67 226
Msa0663220 MtrunA17_Chr2g0296661 33.406 458 278 10 50 495 52 494 3.03e-67 224
Msa0663220 MtrunA17_Chr5g0419451 31.973 441 278 13 64 497 94 519 7.35e-67 224
Msa0663220 MtrunA17_Chr1g0210091 31.034 493 298 13 3 467 31 509 1.59e-66 223
Msa0663220 MtrunA17_Chr5g0430071 37.464 347 206 4 142 482 2 343 1.08e-64 214
Msa0663220 MtrunA17_Chr8g0346261 32.135 473 291 16 31 491 86 540 3.05e-63 215
Msa0663220 MtrunA17_Chr4g0058211 48.544 206 104 1 288 493 10 213 1.54e-62 203
Msa0663220 MtrunA17_Chr1g0198191 29.583 480 302 14 5 462 18 483 2.53e-62 212
Msa0663220 MtrunA17_Chr3g0101591 47.208 197 104 0 296 492 38 234 5.93e-62 202
Msa0663220 MtrunA17_Chr5g0445371 43.629 259 113 4 236 493 1 227 9.76e-61 199
Msa0663220 MtrunA17_Chr8g0377341 30.819 464 300 14 32 489 70 518 1.02e-60 207
Msa0663220 MtrunA17_Chr5g0446101 33.438 320 199 5 176 492 1 309 2.72e-60 201
Msa0663220 MtrunA17_Chr1g0160861 37.162 296 181 4 198 492 43 334 1.97e-59 199
Msa0663220 MtrunA17_Chr2g0310351 42.347 196 113 0 297 492 1 196 3.17e-55 183
Msa0663220 MtrunA17_Chr6g0463621 47.000 200 101 3 297 492 1 199 8.91e-55 182
Msa0663220 MtrunA17_Chr5g0409051 28.310 491 324 14 26 495 26 509 3.07e-54 190
Msa0663220 MtrunA17_Chr5g0445351 51.807 166 80 0 324 489 51 216 3.84e-54 181
Msa0663220 MtrunA17_Chr2g0280071 29.000 500 331 10 5 489 39 529 4.97e-53 191
Msa0663220 MtrunA17_Chr5g0423621 48.333 180 91 1 313 492 1 178 5.06e-53 177
Msa0663220 MtrunA17_Chr1g0174431 44.500 200 102 3 297 489 1 198 1.55e-52 177
Msa0663220 MtrunA17_Chr5g0445761 54.237 177 81 0 297 473 1 177 2.27e-51 173
Msa0663220 MtrunA17_Chr8g0387101 29.638 442 290 9 61 489 66 499 1.67e-50 180
Msa0663220 MtrunA17_Chr8g0390871 38.756 209 126 2 285 492 15 222 9.52e-50 170
Msa0663220 MtrunA17_Chr2g0314781 50.303 165 80 1 313 477 1 163 3.34e-49 166
Msa0663220 MtrunA17_Chr2g0334021 25.941 478 322 11 31 494 37 496 7.19e-49 175
Msa0663220 MtrunA17_Chr8g0370641 26.036 507 346 12 11 494 16 516 8.84e-49 176
Msa0663220 MtrunA17_Chr2g0280081 29.688 448 281 14 61 489 565 997 1.75e-48 179
Msa0663220 MtrunA17_Chr2g0280081 29.724 434 258 13 61 467 64 477 9.68e-45 168
Msa0663220 MtrunA17_Chr4g0046681 43.434 198 107 2 297 492 31 225 2.93e-48 166
Msa0663220 MtrunA17_Chr8g0364651 27.362 508 323 15 5 489 7 491 4.43e-47 170
Msa0663220 MtrunA17_Chr6g0451681 37.743 257 152 5 242 494 221 473 5.03e-47 170
Msa0663220 MtrunA17_Chr6g0451681 36.686 169 104 3 8 173 39 207 3.33e-25 108
Msa0663220 MtrunA17_Chr4g0074581 26.374 455 304 13 28 462 68 511 5.06e-47 171
Msa0663220 MtrunA17_Chr5g0413911 28.373 504 292 16 30 489 43 521 9.50e-47 170
Msa0663220 MtrunA17_Chr3g0107611 25.490 459 312 8 30 465 51 502 9.98e-47 170
Msa0663220 MtrunA17_Chr2g0280121 29.759 457 271 16 61 489 68 502 2.29e-46 169
Msa0663220 MtrunA17_Chr5g0445361 57.143 126 54 0 367 492 8 133 4.26e-46 157
Msa0663220 MtrunA17_Chr8g0370651 25.292 514 353 12 5 494 14 520 4.56e-46 168
Msa0663220 MtrunA17_Chr6g0451811 40.196 204 117 2 293 494 1 201 1.99e-44 155
Msa0663220 MtrunA17_Chr3g0117301 52.991 117 55 0 350 466 3 119 2.31e-44 152
Msa0663220 MtrunA17_Chr3g0101541 52.273 132 63 0 345 476 1 132 2.75e-44 152
Msa0663220 MtrunA17_Chr5g0445751 33.086 269 173 3 30 297 45 307 7.39e-44 157
Msa0663220 MtrunA17_Chr6g0463611 35.000 300 176 7 3 294 20 308 7.12e-43 155
Msa0663220 MtrunA17_Chr6g0451771 38.725 204 120 2 293 494 18 218 1.35e-42 151
Msa0663220 MtrunA17_Chr3g0107541 25.390 449 304 9 38 465 59 497 2.99e-42 157
Msa0663220 MtrunA17_Chr2g0280041 28.442 443 293 12 61 489 96 528 4.29e-42 157
Msa0663220 MtrunA17_Chr4g0046661 43.103 174 97 1 290 461 18 191 1.06e-40 146
Msa0663220 MtrunA17_Chr3g0116731 50.704 142 55 2 350 491 3 129 9.29e-40 140
Msa0663220 MtrunA17_Chr3g0086681 44.872 156 82 1 343 494 11 166 1.37e-39 141
Msa0663220 MtrunA17_Chr5g0430041 46.528 144 76 1 323 465 1 144 1.53e-39 141
Msa0663220 MtrunA17_Chr5g0402981 39.247 186 107 3 310 492 5 187 1.65e-39 142
Msa0663220 MtrunA17_Chr4g0046691 32.411 253 162 6 24 273 33 279 8.89e-39 143
Msa0663220 MtrunA17_Chr8g0364631 28.484 488 300 13 30 489 33 499 2.50e-38 146
Msa0663220 MtrunA17_Chr5g0430151 42.857 161 91 1 323 482 1 161 4.18e-38 137
Msa0663220 MtrunA17_Chr1g0174421 30.640 297 201 5 2 295 20 314 1.87e-37 140
Msa0663220 MtrunA17_Chr4g0076171 42.473 186 80 3 313 492 1 165 3.59e-37 134
Msa0663220 MtrunA17_Chr4g0046701 45.000 160 75 3 339 492 1 153 5.29e-37 134
Msa0663220 MtrunA17_Chr2g0280011 35.784 204 121 4 293 489 4 204 5.14e-36 132
Msa0663220 MtrunA17_Chr4g0046671 31.102 254 163 6 30 273 44 295 1.00e-35 135
Msa0663220 MtrunA17_Chr2g0280061 34.314 204 124 4 293 489 4 204 1.01e-32 124
Msa0663220 MtrunA17_Chr5g0402971 28.571 266 170 7 21 273 35 293 1.41e-31 124
Msa0663220 MtrunA17_Chr4g0028321 42.857 119 67 1 365 482 25 143 4.97e-31 117
Msa0663220 MtrunA17_Chr5g0445411 39.610 154 92 1 6 158 22 175 5.88e-31 118
Msa0663220 MtrunA17_Chr5g0430171 36.232 207 125 4 18 222 24 225 6.30e-30 117
Msa0663220 MtrunA17_Chr6g0477081 28.685 251 163 4 159 407 5 241 2.52e-29 115
Msa0663220 MtrunA17_Chr4g0030741 27.174 276 186 5 50 320 84 349 3.84e-29 117
Msa0663220 MtrunA17_Chr5g0444981 44.048 168 91 2 312 477 26 192 5.74e-29 114
Msa0663220 MtrunA17_Chr2g0310371 41.026 117 68 1 30 146 29 144 9.62e-27 105
Msa0663220 MtrunA17_Chr6g0451801 29.245 318 188 10 6 302 19 320 2.11e-26 109
Msa0663220 MtrunA17_Chr0c19g0493771 23.821 424 288 14 61 467 218 623 7.05e-26 111
Msa0663220 MtrunA17_Chr4g0030761 36.424 151 69 5 349 489 2 135 3.32e-25 101
Msa0663220 MtrunA17_Chr5g0396521 23.554 484 292 16 61 489 103 563 1.67e-24 107
Msa0663220 MtrunA17_Chr3g0117321 44.828 116 63 1 31 146 9 123 2.68e-24 97.8
Msa0663220 MtrunA17_Chr8g0351391 24.115 452 302 15 37 464 49 483 2.76e-24 105
Msa0663220 MtrunA17_Chr3g0128461 24.350 423 290 13 54 464 93 497 8.47e-24 104
Msa0663220 MtrunA17_Chr5g0431631 38.060 134 82 1 7 139 28 161 1.27e-23 97.4
Msa0663220 MtrunA17_Chr3g0141801 23.305 472 320 13 6 464 15 457 1.83e-23 103
Msa0663220 MtrunA17_Chr3g0116721 30.366 191 127 4 137 323 2 190 3.40e-23 97.1
Msa0663220 MtrunA17_Chr1g0207851 26.937 271 178 7 50 307 58 321 3.57e-23 100
Msa0663220 MtrunA17_Chr4g0044851 24.839 467 291 14 15 464 21 444 6.68e-23 101
Msa0663220 MtrunA17_Chr6g0484771 32.394 142 91 1 65 206 1 137 8.18e-23 94.4
Msa0663220 MtrunA17_Chr8g0351421 23.887 494 322 14 4 467 16 485 9.21e-23 101
Msa0663220 MtrunA17_Chr2g0293411 24.888 446 292 17 30 461 42 458 9.85e-23 101
Msa0663220 MtrunA17_Chr7g0235261 25.776 419 275 13 56 460 83 479 1.09e-22 101
Msa0663220 MtrunA17_Chr3g0135841 22.379 496 319 17 9 456 22 499 1.13e-22 101
Msa0663220 MtrunA17_Chr8g0351401 24.590 488 322 17 33 493 39 507 1.39e-22 100
Msa0663220 MtrunA17_Chr1g0151221 23.044 473 309 15 31 463 41 498 4.72e-22 99.4
Msa0663220 MtrunA17_Chr7g0260821 25.328 458 307 20 22 460 29 470 5.86e-22 99.0
Msa0663220 MtrunA17_Chr4g0063221 24.460 417 298 12 54 464 87 492 9.61e-22 98.2
Msa0663220 MtrunA17_Chr4g0004601 23.721 430 270 12 56 460 104 500 1.10e-21 98.2
Msa0663220 MtrunA17_Chr3g0107551 28.824 170 118 1 296 462 4 173 1.60e-21 92.8
Msa0663220 MtrunA17_Chr8g0351461 23.026 456 321 11 33 467 38 484 1.79e-21 97.4
Msa0663220 MtrunA17_Chr1g0203141 22.464 414 306 11 54 464 87 488 2.11e-21 97.4
Msa0663220 MtrunA17_Chr6g0457421 24.408 422 286 17 53 464 82 480 2.21e-21 97.1
Msa0663220 MtrunA17_Chr8g0336361 22.894 463 279 13 56 464 93 531 2.65e-21 97.1
Msa0663220 MtrunA17_Chr3g0105761 29.240 171 116 2 298 465 1 169 3.15e-21 92.0
Msa0663220 MtrunA17_Chr1g0179811 23.829 491 317 18 26 491 76 534 3.16e-21 96.7
Msa0663220 MtrunA17_Chr1g0204271 24.631 406 262 14 89 465 89 479 4.60e-21 96.3
Msa0663220 MtrunA17_Chr7g0260831 24.130 460 312 19 21 460 27 469 6.85e-21 95.5
Msa0663220 MtrunA17_Chr8g0372711 24.416 471 313 15 4 464 21 458 7.35e-21 95.5
Msa0663220 MtrunA17_Chr8g0381541 21.616 458 290 14 30 460 44 459 2.11e-20 94.0
Msa0663220 MtrunA17_Chr8g0381571 21.616 458 290 14 30 460 44 459 2.73e-20 93.6
Msa0663220 MtrunA17_Chr1g0203151 21.882 425 301 13 54 467 83 487 1.80e-19 91.3
Msa0663220 MtrunA17_Chr2g0310361 32.836 134 89 1 161 294 5 137 4.17e-19 84.0
Msa0663220 MtrunA17_Chr8g0351311 23.789 454 302 15 37 464 49 484 4.64e-19 90.1
Msa0663220 MtrunA17_Chr4g0038271 22.660 406 277 14 88 464 136 533 6.02e-19 90.1
Msa0663220 MtrunA17_Chr8g0351441 22.154 492 332 14 4 467 16 484 1.07e-18 89.0
Msa0663220 MtrunA17_Chr8g0334891 24.115 452 304 15 24 464 33 456 1.87e-18 88.2
Msa0663220 MtrunA17_Chr2g0293421 23.543 446 295 15 30 461 46 459 2.38e-18 87.8
Msa0663220 MtrunA17_Chr2g0313821 27.019 322 202 12 159 464 185 489 3.40e-18 87.4
Msa0663220 MtrunA17_Chr8g0362731 24.863 366 239 13 114 464 37 381 4.09e-18 86.3
Msa0663220 MtrunA17_Chr5g0445341 46.914 81 42 1 67 146 3 83 5.88e-18 78.6
Msa0663220 MtrunA17_Chr3g0105751 25.954 262 173 6 30 276 48 303 2.69e-17 84.0
Msa0663220 MtrunA17_Chr5g0431491 60.784 51 20 0 444 494 1 51 2.78e-17 75.9
Msa0663220 MtrunA17_Chr7g0262111 23.349 424 280 11 54 461 83 477 3.23e-17 84.3
Msa0663220 MtrunA17_Chr4g0044841 22.811 491 300 15 15 479 22 459 3.36e-17 84.0
Msa0663220 MtrunA17_Chr2g0313781 24.606 317 212 9 161 464 199 501 4.36e-17 84.0
Msa0663220 MtrunA17_Chr8g0388921 24.738 477 311 18 2 463 7 450 4.96e-17 83.6
Msa0663220 MtrunA17_Chr2g0313761 23.310 429 287 15 54 464 80 484 5.06e-17 83.6
Msa0663220 MtrunA17_Chr4g0076181 54.688 64 29 0 67 130 3 66 8.67e-17 77.8
Msa0663220 MtrunA17_Chr2g0307291 22.857 420 290 14 59 464 92 491 1.02e-16 82.8
Msa0663220 MtrunA17_Chr1g0184421 22.737 475 326 19 12 460 12 471 1.31e-16 82.4
Msa0663220 MtrunA17_Chr2g0314771 23.718 156 119 0 67 222 3 158 1.67e-16 77.0
Msa0663220 MtrunA17_Chr1g0164371 22.833 473 315 14 3 464 17 450 1.81e-16 82.0
Msa0663220 MtrunA17_Chr2g0288661 21.957 419 303 11 55 464 88 491 2.09e-16 82.0
Msa0663220 MtrunA17_Chr8g0364081 23.744 438 297 16 47 460 86 510 3.97e-16 81.3
Msa0663220 MtrunA17_Chr5g0397971 22.388 469 319 15 7 463 9 444 5.78e-16 80.5
Msa0663220 MtrunA17_Chr3g0107561 24.903 257 182 5 30 276 46 301 7.86e-16 78.6
Msa0663220 MtrunA17_Chr2g0280001 29.012 162 112 2 5 163 39 200 9.36e-16 76.3
Msa0663220 MtrunA17_Chr2g0307301 22.619 420 291 13 59 464 92 491 1.24e-15 79.3
Msa0663220 MtrunA17_Chr2g0313791 24.204 314 217 9 161 464 182 484 1.30e-15 79.3
Msa0663220 MtrunA17_Chr6g0449341 22.846 499 331 19 1 460 49 532 1.37e-15 79.3
Msa0663220 MtrunA17_Chr8g0387001 23.011 465 307 16 27 457 24 471 1.72e-15 79.0
Msa0663220 MtrunA17_Chr2g0313811 25.078 319 208 11 161 464 199 501 1.87e-15 79.0
Msa0663220 MtrunA17_Chr1g0154731 22.837 416 290 13 54 460 81 474 1.92e-15 79.0
Msa0663220 MtrunA17_Chr7g0248991 21.839 348 239 12 83 415 22 351 3.09e-15 77.4
Msa0663220 MtrunA17_Chr2g0313751 24.083 436 292 16 46 464 103 516 3.18e-15 78.2
Msa0663220 MtrunA17_Chr7g0255131 22.951 488 329 17 3 461 8 477 5.04e-15 77.4
Msa0663220 MtrunA17_Chr5g0443731 21.983 464 304 16 21 464 21 446 5.21e-15 77.4
Msa0663220 MtrunA17_Chr5g0400421 20.808 495 317 15 28 495 44 490 7.77e-15 77.0
Msa0663220 MtrunA17_Chr8g0339861 28.846 208 131 7 241 441 240 437 7.86e-15 76.6
Msa0663220 MtrunA17_Chr5g0431601 41.667 84 40 2 67 146 3 81 7.90e-15 69.7
Msa0663220 MtrunA17_Chr8g0372591 29.032 124 88 0 296 419 2 125 7.91e-15 71.6
Msa0663220 MtrunA17_Chr3g0078411 24.201 219 152 6 250 463 229 438 7.93e-15 76.6
Msa0663220 MtrunA17_Chr8g0372411 22.246 472 317 15 30 489 40 473 9.38e-15 76.6
Msa0663220 MtrunA17_Chr2g0313801 24.214 318 212 10 161 464 187 489 1.02e-14 76.6
Msa0663220 MtrunA17_Chr8g0334941 27.197 239 160 6 233 464 70 301 1.08e-14 75.1
Msa0663220 MtrunA17_Chr1g0176851 23.431 239 173 4 117 351 2 234 1.22e-14 73.6
Msa0663220 MtrunA17_Chr6g0455461 22.129 479 302 19 6 463 10 438 1.69e-14 75.9
Msa0663220 MtrunA17_Chr2g0313831 23.601 411 279 15 69 464 99 489 1.74e-14 75.9
Msa0663220 MtrunA17_Chr5g0430051 42.391 92 50 2 19 108 26 116 3.32e-14 68.9
Msa0663220 MtrunA17_Chr8g0354511 23.261 417 288 12 61 464 100 497 5.42e-14 74.3
Msa0663220 MtrunA17_Chr8g0348751 23.359 518 344 19 6 494 7 500 6.81e-14 73.9
Msa0663220 MtrunA17_Chr5g0445541 48.000 75 38 1 25 98 34 108 1.35e-13 67.8
Msa0663220 MtrunA17_Chr1g0193811 22.406 424 299 12 53 464 84 489 1.39e-13 73.2
Msa0663220 MtrunA17_Chr6g0472171 31.387 137 89 4 348 480 13 148 1.50e-13 68.6
Msa0663220 MtrunA17_Chr5g0400411 21.844 499 306 16 28 495 44 489 2.50e-13 72.0
Msa0663220 MtrunA17_Chr3g0089361 26.794 209 139 5 260 464 253 451 2.50e-13 72.0
Msa0663220 MtrunA17_Chr2g0280051 27.160 162 115 2 5 163 49 210 4.45e-13 70.1
Msa0663220 MtrunA17_Chr8g0372331 30.645 124 80 3 374 494 1 121 5.23e-13 66.2
Msa0663220 MtrunA17_Chr1g0163421 26.740 273 172 11 215 467 252 516 1.03e-12 70.5
Msa0663220 MtrunA17_Chr8g0354571 23.040 421 284 15 61 464 100 497 1.37e-12 70.1
Msa0663220 MtrunA17_Chr4g0056981 45.070 71 39 0 323 393 1 71 4.94e-12 61.6
Msa0663220 MtrunA17_Chr3g0113321 21.573 445 304 14 30 462 30 441 9.84e-12 67.0
Msa0663220 MtrunA17_Chr6g0451761 25.182 274 161 7 18 275 26 271 1.30e-11 65.5
Msa0663220 MtrunA17_Chr7g0214931 24.221 289 188 11 100 367 125 403 1.49e-11 66.2
Msa0663220 MtrunA17_Chr1g0163451 25.000 272 176 10 216 467 237 500 1.90e-11 66.2
Msa0663220 MtrunA17_Chr1g0182861 31.667 120 78 3 348 464 18 136 2.27e-11 62.4
Msa0663220 MtrunA17_Chr2g0286091 27.684 177 122 4 290 463 298 471 2.47e-11 65.9
Msa0663220 MtrunA17_Chr1g0164351 24.242 297 195 11 94 367 128 417 3.82e-11 65.1
Msa0663220 MtrunA17_Chr3g0104351 22.436 468 306 18 32 460 36 485 7.07e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663220 AT4G31500.1 45.122 492 264 4 5 491 3 493 6.52e-157 456
Msa0663220 AT4G13770.1 41.785 493 281 5 5 492 4 495 1.63e-143 422
Msa0663220 AT3G26330.1 45.570 474 251 4 24 494 26 495 3.12e-141 416
Msa0663220 AT3G26310.1 43.863 497 270 5 5 497 6 497 4.76e-141 415
Msa0663220 AT3G26300.1 44.106 492 267 5 5 492 6 493 7.18e-140 412
Msa0663220 AT3G26320.1 44.491 481 259 5 16 492 17 493 1.95e-139 411
Msa0663220 AT5G57260.1 43.724 478 260 6 21 492 22 496 1.22e-138 409
Msa0663220 AT1G13080.1 43.775 498 266 8 4 492 5 497 5.90e-134 397
Msa0663220 AT2G02580.1 43.992 491 268 4 5 492 7 493 1.12e-128 384
Msa0663220 AT3G26290.2 43.396 477 263 4 19 492 34 506 2.05e-128 383
Msa0663220 AT3G26290.1 43.396 477 263 4 19 492 21 493 2.08e-128 383
Msa0663220 AT5G25140.1 41.020 490 280 5 6 492 6 489 2.21e-127 380
Msa0663220 AT3G26180.1 41.851 497 274 10 7 492 5 497 2.88e-127 380
Msa0663220 AT3G26280.1 42.710 487 262 11 16 492 18 497 1.64e-126 378
Msa0663220 AT3G48280.1 38.134 493 292 6 4 493 3 485 2.23e-126 377
Msa0663220 AT3G26280.2 42.710 487 262 11 16 492 35 514 2.91e-126 378
Msa0663220 AT3G26170.1 40.845 497 280 9 6 492 5 497 4.09e-126 377
Msa0663220 AT1G13110.1 41.015 473 269 7 30 495 33 502 5.83e-126 377
Msa0663220 AT3G48270.1 39.662 474 274 5 21 493 23 485 4.44e-125 374
Msa0663220 AT1G13090.2 43.450 458 239 8 30 476 29 477 1.34e-124 373
Msa0663220 AT3G26210.1 42.609 460 256 7 38 492 40 496 1.66e-124 373
Msa0663220 AT5G25180.1 40.977 471 269 5 25 492 25 489 1.98e-124 372
Msa0663220 AT3G48310.1 38.901 473 277 5 21 492 24 485 1.68e-122 367
Msa0663220 AT3G44250.1 43.710 469 254 7 30 492 29 493 6.79e-122 366
Msa0663220 AT3G26190.1 41.365 469 266 7 30 492 29 494 6.16e-121 363
Msa0663220 AT5G25120.1 40.417 480 277 6 16 492 16 489 1.10e-120 363
Msa0663220 AT3G48290.1 40.084 474 270 6 19 489 21 483 2.12e-120 362
Msa0663220 AT3G26200.1 42.004 469 263 7 30 492 29 494 5.58e-120 361
Msa0663220 AT5G25130.1 41.102 472 271 6 23 492 23 489 7.60e-120 361
Msa0663220 AT3G26230.1 41.935 496 278 8 4 492 1 493 3.96e-119 359
Msa0663220 AT3G48320.1 39.596 495 284 7 2 493 4 486 3.67e-118 356
Msa0663220 AT4G13310.1 40.042 472 271 6 26 492 29 493 5.36e-118 356
Msa0663220 AT3G26150.1 39.235 497 288 9 6 492 5 497 6.88e-118 356
Msa0663220 AT3G26270.1 40.421 475 272 8 24 492 27 496 2.16e-117 355
Msa0663220 AT4G13290.1 39.623 477 265 8 24 492 25 486 1.70e-115 349
Msa0663220 AT3G26830.1 39.425 487 275 9 4 480 1 477 4.68e-115 348
Msa0663220 AT3G26160.1 40.167 478 273 9 28 496 29 502 8.93e-115 348
Msa0663220 AT3G48290.2 38.000 500 270 7 19 489 21 509 2.88e-114 347
Msa0663220 AT2G24180.1 38.559 472 279 5 24 492 31 494 1.54e-113 345
Msa0663220 AT3G48300.1 39.662 474 268 8 22 492 20 478 1.94e-113 344
Msa0663220 AT3G48300.2 39.662 474 268 8 22 492 22 480 2.07e-113 344
Msa0663220 AT1G13100.1 40.858 443 247 7 39 474 38 472 4.22e-113 343
Msa0663220 AT2G30770.1 38.675 468 277 6 25 489 29 489 1.82e-112 342
Msa0663220 AT3G53280.1 40.576 451 257 8 30 474 29 474 1.90e-110 337
Msa0663220 AT3G53300.1 39.323 473 278 8 30 496 29 498 1.24e-108 332
Msa0663220 AT5G24950.1 37.872 470 277 8 28 491 31 491 2.63e-107 328
Msa0663220 AT5G35715.1 37.385 436 265 6 67 496 3 436 3.48e-106 324
Msa0663220 AT3G26220.1 41.322 484 273 9 17 492 16 496 5.18e-105 323
Msa0663220 AT5G04330.1 37.895 475 276 12 30 492 33 500 2.89e-104 321
Msa0663220 AT1G11610.1 36.461 469 282 6 27 489 31 489 3.63e-104 320
Msa0663220 AT1G33720.1 37.352 506 287 11 6 492 9 503 5.01e-104 320
Msa0663220 AT2G30750.1 38.266 473 284 5 19 489 23 489 6.35e-104 320
Msa0663220 AT2G45560.1 36.310 504 289 9 6 489 9 500 8.10e-104 320
Msa0663220 AT1G11610.2 36.913 447 266 6 27 467 31 467 4.16e-102 315
Msa0663220 AT2G45550.1 36.920 474 279 7 30 492 39 503 2.55e-101 313
Msa0663220 AT5G07990.1 35.108 507 301 10 4 494 6 500 8.25e-101 312
Msa0663220 AT4G12300.1 35.897 468 292 7 7 469 20 484 2.69e-100 311
Msa0663220 AT4G36220.1 35.443 474 272 9 37 489 48 508 1.26e-98 307
Msa0663220 AT5G42590.1 37.400 500 295 9 2 491 1 492 1.72e-98 306
Msa0663220 AT3G61040.1 37.259 467 283 6 29 492 33 492 2.72e-98 305
Msa0663220 AT1G13080.2 43.662 355 190 5 145 492 28 379 4.41e-98 301
Msa0663220 AT2G40890.1 35.135 481 279 10 30 493 28 492 1.64e-96 301
Msa0663220 AT2G45570.1 37.797 463 269 9 38 489 47 501 7.33e-96 300
Msa0663220 AT5G67310.1 35.556 495 299 10 5 494 18 497 2.26e-94 295
Msa0663220 AT5G24960.1 38.429 471 283 5 23 491 27 492 3.31e-93 292
Msa0663220 AT5G44620.1 33.991 456 293 5 38 490 55 505 5.91e-93 292
Msa0663220 AT4G12320.1 32.731 498 321 8 7 497 20 510 9.61e-93 291
Msa0663220 AT2G45580.1 35.991 464 280 8 39 492 48 504 8.10e-92 289
Msa0663220 AT4G22710.1 33.983 462 297 5 38 497 62 517 6.51e-91 287
Msa0663220 AT4G22690.1 33.766 462 298 5 38 497 93 548 8.33e-90 285
Msa0663220 AT1G01280.1 34.958 472 281 9 38 494 41 501 2.15e-89 283
Msa0663220 AT4G37410.1 36.310 504 286 13 7 495 5 488 1.27e-88 280
Msa0663220 AT1G74550.1 33.600 500 299 13 4 493 1 477 1.01e-87 278
Msa0663220 AT4G37400.1 35.619 452 269 9 50 494 51 487 5.04e-87 276
Msa0663220 AT3G26180.2 49.615 260 126 3 236 492 106 363 1.32e-86 271
Msa0663220 AT4G37310.1 35.197 483 294 11 24 495 25 499 1.61e-86 275
Msa0663220 AT4G13310.2 39.510 367 211 5 26 388 29 388 2.38e-86 271
Msa0663220 AT4G12310.1 34.077 493 312 7 7 492 22 508 3.85e-86 275
Msa0663220 AT4G37430.1 33.595 509 299 13 1 494 6 490 5.13e-86 274
Msa0663220 AT4G37340.1 34.400 500 302 11 5 495 6 488 1.69e-85 272
Msa0663220 AT5G57220.1 35.656 488 289 11 4 485 4 472 1.21e-84 270
Msa0663220 AT4G37320.1 34.851 505 293 12 4 495 6 487 1.55e-84 270
Msa0663220 AT3G25180.1 33.000 500 318 10 5 493 10 503 2.27e-84 270
Msa0663220 AT4G37360.1 35.119 504 289 15 1 489 1 481 2.35e-84 269
Msa0663220 AT5G06900.1 34.298 484 304 9 4 482 9 483 3.06e-84 269
Msa0663220 AT4G31940.1 34.298 484 287 12 31 489 33 510 2.59e-83 267
Msa0663220 AT4G37370.1 34.413 494 295 12 5 489 6 479 1.27e-82 265
Msa0663220 AT3G52970.1 33.134 501 306 11 5 489 19 506 1.51e-81 263
Msa0663220 AT4G12330.1 31.659 458 300 6 38 490 55 504 4.97e-81 261
Msa0663220 AT1G74540.1 31.111 495 310 11 6 489 5 479 6.33e-81 260
Msa0663220 AT1G33720.4 38.095 378 216 7 125 492 2 371 9.93e-81 256
Msa0663220 AT1G33720.3 38.095 378 216 7 125 492 2 371 9.93e-81 256
Msa0663220 AT1G33720.5 38.095 378 216 7 125 492 2 371 9.93e-81 256
Msa0663220 AT4G31970.1 33.126 483 293 12 31 489 33 509 4.24e-80 259
Msa0663220 AT4G37330.1 34.524 504 293 14 4 495 6 484 9.69e-80 257
Msa0663220 AT3G52970.2 32.233 515 306 11 5 489 19 520 1.11e-79 258
Msa0663220 AT3G20090.2 35.011 437 262 7 40 464 54 480 2.09e-79 257
Msa0663220 AT2G42250.1 31.737 501 320 7 5 489 9 503 2.85e-79 256
Msa0663220 AT3G20940.1 33.698 457 289 6 18 464 28 480 3.62e-79 256
Msa0663220 AT5G36220.1 35.818 483 274 13 28 495 32 493 3.92e-78 253
Msa0663220 AT2G25160.1 31.641 512 317 12 2 489 3 505 5.54e-78 253
Msa0663220 AT4G15360.1 32.489 474 308 5 5 472 12 479 1.06e-77 253
Msa0663220 AT2G23190.1 32.869 502 307 12 4 495 50 531 1.46e-76 250
Msa0663220 AT3G28740.1 36.444 450 251 13 28 463 38 466 3.05e-76 248
Msa0663220 AT3G20950.1 33.122 474 292 10 6 464 20 483 3.89e-76 249
Msa0663220 AT1G33730.1 35.849 371 220 6 132 491 5 368 5.41e-76 243
Msa0663220 AT1G33730.2 35.849 371 220 6 132 491 5 368 5.41e-76 243
Msa0663220 AT2G14100.1 30.876 502 316 7 3 489 15 500 1.07e-75 247
Msa0663220 AT5G10600.1 32.535 501 309 12 6 494 21 504 2.86e-75 246
Msa0663220 AT1G33720.2 35.484 403 217 8 125 492 2 396 1.36e-74 241
Msa0663220 AT3G53290.1 37.349 415 231 7 83 492 11 401 9.25e-74 239
Msa0663220 AT2G23220.1 33.333 456 277 12 18 463 35 473 9.73e-74 242
Msa0663220 AT3G20130.1 31.776 428 266 8 51 464 64 479 1.76e-73 241
Msa0663220 AT5G10610.1 33.066 499 296 13 12 494 12 488 1.11e-72 239
Msa0663220 AT4G31950.1 33.058 484 281 15 31 489 33 498 4.89e-72 238
Msa0663220 AT4G15350.1 34.703 438 264 9 40 464 45 473 2.62e-71 236
Msa0663220 AT4G20240.1 34.091 396 250 6 30 422 34 421 5.42e-71 233
Msa0663220 AT1G66540.1 34.439 392 230 10 113 495 1 374 9.92e-71 230
Msa0663220 AT3G32047.1 30.909 440 296 4 43 478 55 490 3.51e-70 232
Msa0663220 AT5G09970.1 33.409 443 275 12 31 462 71 504 4.91e-70 233
Msa0663220 AT5G42580.1 31.981 419 265 6 51 464 61 464 4.92e-70 232
Msa0663220 AT3G20140.1 32.462 459 287 11 18 464 28 475 1.20e-69 231
Msa0663220 AT5G06905.1 29.237 472 312 7 10 462 9 477 1.36e-69 231
Msa0663220 AT3G20110.1 32.731 443 287 6 33 472 43 477 4.49e-68 227
Msa0663220 AT2G45580.2 40.333 300 167 5 200 492 56 350 7.52e-68 222
Msa0663220 AT3G20960.2 34.820 471 291 7 4 464 14 478 1.80e-67 226
Msa0663220 AT4G15330.1 31.020 490 280 10 4 464 13 473 2.19e-67 225
Msa0663220 AT3G20080.2 31.868 455 298 6 19 464 29 480 4.18e-67 225
Msa0663220 AT3G20080.1 31.868 455 298 6 19 464 29 480 4.18e-67 225
Msa0663220 AT2G46660.1 31.983 469 290 14 31 489 72 521 1.01e-66 224
Msa0663220 AT1G13710.1 31.277 470 293 14 31 489 55 505 1.49e-66 223
Msa0663220 AT5G47990.1 33.121 471 296 8 4 462 14 477 2.04e-66 223
Msa0663220 AT1G74110.1 33.190 464 281 15 20 462 52 507 3.09e-66 223
Msa0663220 AT2G27000.1 32.237 456 292 6 19 464 29 477 6.62e-66 221
Msa0663220 AT3G61880.1 31.120 482 307 13 19 490 57 523 1.53e-65 221
Msa0663220 AT3G20100.1 30.689 479 304 9 5 464 10 479 3.65e-65 219
Msa0663220 AT3G61880.2 31.120 482 307 13 19 490 57 523 4.68e-65 220
Msa0663220 AT1G50520.1 30.435 437 274 9 47 462 53 480 6.63e-64 216
Msa0663220 AT3G20130.2 30.691 391 245 8 88 464 73 451 3.71e-63 213
Msa0663220 AT4G15380.1 29.801 453 281 9 56 492 69 500 4.38e-62 211
Msa0663220 AT3G20120.4 31.567 453 280 6 36 472 48 486 1.53e-61 210
Msa0663220 AT2G05180.1 32.888 374 237 5 51 418 63 428 2.63e-61 207
Msa0663220 AT2G30490.1 31.360 456 285 11 40 480 44 486 6.52e-61 208
Msa0663220 AT3G20090.1 34.659 352 208 7 125 464 1 342 7.85e-61 204
Msa0663220 AT1G50560.1 31.148 427 267 10 54 464 68 483 1.96e-60 207
Msa0663220 AT3G20960.1 33.862 378 236 6 95 464 4 375 6.74e-60 203
Msa0663220 AT4G20240.2 33.424 368 233 6 30 395 34 391 1.43e-59 201
Msa0663220 AT5G24960.2 36.512 367 227 4 23 388 27 388 3.43e-59 201
Msa0663220 AT1G01190.2 28.281 442 290 10 31 462 80 504 5.05e-59 204
Msa0663220 AT1G01190.1 28.281 442 290 10 31 462 75 499 7.66e-59 203
Msa0663220 AT1G28430.1 29.545 440 282 8 40 464 51 477 7.53e-58 200
Msa0663220 AT1G66540.2 34.835 333 193 9 169 495 1 315 1.12e-57 194
Msa0663220 AT1G11600.1 27.753 454 308 11 24 462 30 478 4.22e-57 198
Msa0663220 AT3G10560.1 30.217 460 289 13 20 462 36 480 8.82e-56 194
Msa0663220 AT2G22330.1 28.067 481 323 10 4 464 27 504 9.95e-56 195
Msa0663220 AT2G22330.2 28.067 481 323 10 4 464 50 527 1.19e-55 195
Msa0663220 AT4G39950.1 27.696 473 320 10 12 465 34 503 3.33e-55 194
Msa0663220 AT1G64940.1 28.974 497 302 15 30 497 34 508 3.45e-55 193
Msa0663220 AT5G05260.2 27.944 501 332 10 3 476 6 504 6.04e-55 192
Msa0663220 AT4G39950.2 27.198 489 334 10 4 473 66 551 6.98e-55 193
Msa0663220 AT2G27010.1 31.612 484 287 11 19 489 25 477 1.32e-54 191
Msa0663220 AT4G15330.2 28.571 490 264 11 4 464 13 445 1.82e-54 190
Msa0663220 AT1G58260.1 27.273 495 315 14 5 467 12 493 5.51e-54 190
Msa0663220 AT5G04630.1 27.912 498 285 14 4 462 14 476 3.73e-53 187
Msa0663220 AT3G61040.2 32.249 369 240 6 29 394 33 394 9.22e-53 183
Msa0663220 AT5G25900.1 27.309 498 320 14 16 492 27 503 1.20e-51 183
Msa0663220 AT1G64950.1 28.400 500 301 14 30 497 33 507 2.36e-51 182
Msa0663220 AT3G25180.2 31.105 389 254 9 5 382 10 395 9.01e-51 178
Msa0663220 AT3G20080.4 30.925 346 230 5 125 464 1 343 7.56e-50 175
Msa0663220 AT3G20080.5 30.925 346 230 5 125 464 1 343 7.56e-50 175
Msa0663220 AT3G20080.6 30.925 346 230 5 125 464 1 343 7.56e-50 175
Msa0663220 AT3G20080.3 30.925 346 230 5 125 464 1 343 7.56e-50 175
Msa0663220 AT2G12190.1 29.025 472 280 13 30 467 33 483 1.02e-49 178
Msa0663220 AT1G13090.1 36.957 276 155 7 30 295 29 295 2.18e-49 171
Msa0663220 AT3G20120.2 30.220 364 224 6 125 472 1 350 5.19e-49 173
Msa0663220 AT3G20120.3 30.220 364 224 6 125 472 1 350 5.19e-49 173
Msa0663220 AT3G20120.1 30.220 364 224 6 125 472 1 350 5.19e-49 173
Msa0663220 AT5G05260.1 27.800 500 302 12 3 476 6 472 6.59e-49 176
Msa0663220 AT1G64930.1 28.657 499 302 17 30 497 33 508 8.77e-49 176
Msa0663220 AT1G16410.1 26.275 510 337 14 3 478 11 515 1.45e-47 173
Msa0663220 AT5G36220.2 33.430 344 202 7 159 495 24 347 1.53e-47 168
Msa0663220 AT3G03470.1 27.237 514 317 16 8 489 14 502 1.18e-46 170
Msa0663220 AT2G45580.3 31.111 360 231 8 39 388 48 400 1.62e-46 167
Msa0663220 AT1G79370.1 26.652 469 309 13 30 467 41 505 5.69e-46 169
Msa0663220 AT3G20935.1 33.657 309 169 7 186 464 3 305 9.73e-46 163
Msa0663220 AT1G16400.1 26.004 473 323 10 30 478 45 514 1.17e-45 167
Msa0663220 AT5G04660.1 27.876 452 295 12 59 494 73 509 3.56e-45 166
Msa0663220 AT2G25160.2 28.894 398 257 9 2 379 3 394 1.88e-44 162
Msa0663220 AT5G61320.1 29.360 453 265 11 62 493 66 484 5.25e-42 157
Msa0663220 AT3G10570.1 26.077 441 292 14 41 462 55 480 1.96e-40 152
Msa0663220 AT1G64900.1 27.521 476 321 14 36 497 38 503 8.55e-38 145
Msa0663220 AT5G35917.1 25.000 480 294 11 18 476 31 465 5.20e-37 142
Msa0663220 AT3G53305.1 50.000 132 61 1 343 474 183 309 7.79e-33 128
Msa0663220 AT3G53305.1 30.952 168 113 3 67 231 3 170 9.93e-18 84.7
Msa0663220 AT1G16410.2 26.161 409 271 12 3 385 11 414 1.85e-32 129
Msa0663220 AT1G19630.1 25.470 479 311 17 1 464 1 448 1.56e-28 118
Msa0663220 AT1G19630.3 25.474 475 308 17 1 460 1 444 4.44e-27 114
Msa0663220 AT4G20235.1 28.409 264 149 7 5 256 1 236 1.49e-26 110
Msa0663220 AT4G20235.1 44.211 95 50 2 372 464 237 330 1.45e-19 90.5
Msa0663220 AT2G26170.1 24.468 470 317 15 16 460 32 488 2.99e-26 112
Msa0663220 AT2G45560.2 27.458 295 185 8 6 280 9 294 1.01e-24 105
Msa0663220 AT2G45510.1 25.000 484 320 14 6 464 15 480 4.72e-24 105
Msa0663220 AT3G19270.2 25.786 477 294 18 7 467 11 443 8.37e-24 104
Msa0663220 AT1G19630.2 26.047 430 277 16 1 415 1 404 1.64e-23 103
Msa0663220 AT3G53130.1 25.155 485 307 22 35 491 78 534 5.62e-23 102
Msa0663220 AT2G44890.1 25.459 436 285 17 88 497 87 508 1.36e-22 101
Msa0663220 AT2G45560.3 27.660 235 152 6 6 227 9 238 2.15e-22 96.7
Msa0663220 AT3G14640.1 25.467 428 273 14 56 464 87 487 5.56e-22 99.4
Msa0663220 AT4G27710.1 25.647 425 283 13 53 464 86 490 6.43e-22 99.4
Msa0663220 AT3G14640.2 25.935 428 271 15 56 464 109 509 7.89e-22 99.0
Msa0663220 AT4G15110.1 23.124 493 301 18 61 497 110 580 2.77e-21 97.4
Msa0663220 AT5G24910.1 23.502 434 299 15 48 464 88 505 7.74e-21 95.9
Msa0663220 AT4G19230.1 22.788 452 280 14 30 464 37 436 2.90e-20 94.0
Msa0663220 AT1G31800.1 23.725 451 299 17 61 491 139 564 3.14e-20 94.4
Msa0663220 AT3G14610.1 23.501 417 284 11 61 464 91 485 5.92e-20 93.2
Msa0663220 AT2G26710.1 23.649 444 295 15 36 464 74 488 6.81e-20 93.2
Msa0663220 AT2G29090.2 22.707 458 302 15 19 464 39 456 9.50e-20 92.4
Msa0663220 AT2G29090.1 22.707 458 302 15 19 464 39 456 9.50e-20 92.4
Msa0663220 AT1G63710.1 25.506 494 312 17 32 494 29 497 9.52e-20 92.8
Msa0663220 AT2G44890.2 24.654 434 273 17 88 497 87 490 2.56e-19 91.3
Msa0663220 AT5G38450.1 24.348 460 305 14 32 464 46 489 2.85e-19 91.3
Msa0663220 AT1G13150.1 24.479 384 245 14 112 464 121 490 3.21e-19 90.9
Msa0663220 AT5G52400.1 22.506 431 301 13 42 461 81 489 3.82e-19 90.9
Msa0663220 AT5G24900.1 22.247 445 290 15 48 464 84 500 4.01e-19 90.9
Msa0663220 AT5G45340.1 23.126 467 304 12 8 464 15 436 1.11e-18 89.0
Msa0663220 AT1G24540.1 21.925 374 268 10 114 467 127 496 1.30e-18 89.0
Msa0663220 AT3G14690.2 23.923 418 290 13 56 464 122 520 1.84e-18 89.0
Msa0663220 AT3G14690.1 23.923 418 290 13 56 464 87 485 1.91e-18 88.6
Msa0663220 AT3G26125.1 22.195 401 266 11 114 482 130 516 2.21e-18 88.6
Msa0663220 AT5G48000.2 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.4 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.7 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.6 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.5 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.3 22.698 467 290 13 24 464 30 451 4.39e-18 87.4
Msa0663220 AT5G48000.1 22.601 469 292 13 24 466 71 494 4.44e-18 87.4
Msa0663220 AT1G67110.1 24.781 456 301 15 32 464 47 483 1.43e-17 85.9
Msa0663220 AT3G14650.1 23.040 421 290 12 56 464 87 485 1.51e-17 85.9
Msa0663220 AT3G14630.1 24.221 417 280 14 61 464 88 481 2.09e-17 85.5
Msa0663220 AT3G14680.1 23.223 422 288 11 56 464 87 485 2.68e-17 85.1
Msa0663220 AT3G14630.2 24.221 417 280 14 61 464 143 536 3.63e-17 84.7
Msa0663220 AT3G30180.1 22.458 472 319 15 1 463 6 439 4.36e-17 84.0
Msa0663220 AT3G14620.1 23.571 420 290 10 55 464 90 488 4.42e-17 84.3
Msa0663220 AT2G26170.2 23.981 417 280 14 69 460 1 405 5.27e-17 83.6
Msa0663220 AT5G38970.1 20.790 481 308 14 5 463 10 439 7.47e-17 83.6
Msa0663220 AT1G11680.1 22.105 475 334 15 1 464 9 458 1.01e-16 83.2
Msa0663220 AT1G65340.1 24.390 246 174 6 231 467 237 479 5.08e-16 80.9
Msa0663220 AT5G23190.1 22.272 449 316 12 40 467 80 516 9.77e-16 80.5
Msa0663220 AT3G48520.1 21.721 488 330 17 4 461 4 469 1.25e-15 79.7
Msa0663220 AT5G05690.3 29.444 180 118 4 288 462 147 322 3.54e-15 77.4
Msa0663220 AT1G55940.1 22.588 456 290 19 30 460 46 463 3.66e-15 78.2
Msa0663220 AT5G05690.1 29.444 180 118 4 288 462 266 441 5.05e-15 77.8
Msa0663220 AT4G20235.2 39.175 97 58 1 160 256 7 102 5.94e-15 72.4
Msa0663220 AT5G38970.2 24.444 225 152 5 244 463 147 358 1.59e-14 75.9
Msa0663220 AT5G38970.4 24.444 225 152 5 244 463 147 358 1.59e-14 75.9
Msa0663220 AT4G39510.1 26.289 194 135 5 299 489 310 498 2.26e-14 75.9
Msa0663220 AT4G36380.1 23.830 470 268 21 30 462 70 486 2.41e-14 75.9
Msa0663220 AT5G35920.1 32.000 125 83 1 354 476 6 130 4.55e-14 70.1
Msa0663220 AT1G34540.1 23.098 368 257 12 114 465 114 471 1.09e-13 73.6
Msa0663220 AT5G08250.1 21.763 363 249 13 122 460 94 445 2.73e-13 72.4
Msa0663220 AT1G73340.1 21.670 443 304 12 30 462 44 453 2.84e-13 72.4
Msa0663220 AT5G08250.2 21.763 363 249 13 122 460 156 507 3.89e-13 72.0
Msa0663220 AT1G57750.1 24.084 191 137 4 290 478 299 483 4.58e-13 71.6
Msa0663220 AT5G52320.1 24.000 250 169 7 231 467 237 478 9.06e-13 70.9
Msa0663220 AT5G52320.2 24.000 250 169 7 231 467 237 478 9.45e-13 70.9
Msa0663220 AT2G23180.1 23.301 206 147 4 290 489 305 505 1.31e-12 70.5
Msa0663220 AT1G78490.2 22.556 399 266 13 30 415 36 404 1.74e-12 69.7
Msa0663220 AT5G02900.1 24.731 186 135 4 290 470 272 457 4.65e-12 68.6
Msa0663220 AT4G39500.1 23.256 172 130 2 298 467 271 442 7.82e-12 67.8
Msa0663220 AT2G34490.1 27.933 179 123 4 288 463 288 463 8.02e-12 67.8
Msa0663220 AT4G39500.2 23.256 172 130 2 298 467 321 492 1.31e-11 67.4
Msa0663220 AT5G36110.1 28.902 173 115 3 294 463 281 448 1.63e-11 67.0
Msa0663220 AT2G29090.3 21.696 401 262 15 76 464 1 361 1.68e-11 66.2
Msa0663220 AT5G36130.1 33.333 93 58 1 371 463 23 111 7.30e-11 60.5
Msa0663220 AT5G58860.1 21.649 485 327 17 9 460 13 477 9.01e-11 64.7

Find 96 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTCTGCAATGTTTATT+AGG 0.151830 4_4:-1893671 Msa0663220:three_prime_UTR
TGTAGAAGATTCCCTATTAT+TGG 0.174765 4_4:+1896945 None:intergenic
GAAAGGAGAAATAAGAAATT+TGG 0.185824 4_4:-1894246 Msa0663220:CDS
ATCGAAAATTGTACTATAAA+TGG 0.194416 4_4:-1894104 Msa0663220:CDS
TCAGTAATTTGCTCTCTATT+TGG 0.194697 4_4:+1896285 None:intergenic
CTCTCGGGATAAAATTCTTC+TGG 0.195705 4_4:+1894005 None:intergenic
CCTAAAGGCCTTCCAATAAT+AGG 0.212398 4_4:-1896957 Msa0663220:CDS
TTCAGAGAGATCCAGATATT+TGG 0.226215 4_4:-1894034 Msa0663220:CDS
TTAACTACAGCTTTCAAATA+AGG 0.234221 4_4:+1894179 None:intergenic
ATAATATGTAGGACTGCTTT+TGG 0.243469 4_4:-1896516 Msa0663220:CDS
CCTATTATTGGAAGGCCTTT+AGG 0.245975 4_4:+1896957 None:intergenic
TCTGGGTTTATCCAAATATC+TGG 0.264752 4_4:+1894023 None:intergenic
CAAAACATATTGTCTTATAA+TGG 0.279846 4_4:-1896747 Msa0663220:CDS
TTACTCTGCAATGTTTATTA+GGG 0.284141 4_4:-1893670 Msa0663220:three_prime_UTR
ATCTTCTCTATTCGTTTGAT+TGG 0.301890 4_4:-1893860 Msa0663220:CDS
TCTCAATTCTCAAAGATATA+TGG 0.308164 4_4:-1896891 Msa0663220:CDS
ATTGAGAAAAGTAGGTTTCA+TGG 0.318678 4_4:-1896471 Msa0663220:CDS
AACCAACATAGTTAATATAA+AGG 0.322908 4_4:+1893722 None:intergenic
GGCAACTGCCATAGGTATAC+TGG 0.330009 4_4:+1893905 None:intergenic
ACTTAGGGACCTTGGCAATA+AGG 0.333093 4_4:+1893754 None:intergenic
ACATATAAGATTGTCTTTGC+TGG 0.340840 4_4:+1894071 None:intergenic
TAGGATTCTCTTCCTTTCAT+AGG 0.341571 4_4:-1897097 Msa0663220:five_prime_UTR
AGAGATTATTGATGAACATT+TGG 0.343337 4_4:-1896310 Msa0663220:CDS
AAAGGAGAAATAAGAAATTT+GGG 0.350078 4_4:-1894245 Msa0663220:CDS
TTCACTTTACTCATTACTCT+TGG 0.357563 4_4:+1894266 None:intergenic
CCACATCAGCAGCATCAGTT+TGG 0.363310 4_4:-1894313 Msa0663220:CDS
ACCTATGGCAGTTGCCTCAT+TGG 0.375465 4_4:-1893898 Msa0663220:CDS
TCTCGGGATAAAATTCTTCT+GGG 0.390314 4_4:+1894006 None:intergenic
CTAAAGGCCTTCCAATAATA+GGG 0.398519 4_4:-1896956 Msa0663220:CDS
TCTAATAGACCTATATCATA+TGG 0.403298 4_4:-1896771 Msa0663220:CDS
AAAACATATTGTCTTATAAT+GGG 0.403774 4_4:-1896746 Msa0663220:CDS
TGCTGATTATATTCCATTCA+CGG 0.407571 4_4:-1896406 Msa0663220:CDS
CAATCTTATATGTAAATGCT+TGG 0.407826 4_4:-1894061 Msa0663220:CDS
ATAAAGGGATGTATCTACTT+AGG 0.408425 4_4:+1893738 None:intergenic
CACATCAGCAGCATCAGTTT+GGG 0.423668 4_4:-1894312 Msa0663220:CDS
ACCAACATAGTTAATATAAA+GGG 0.428466 4_4:+1893723 None:intergenic
GACTTCGAACTAATACCATT+TGG 0.429069 4_4:-1893948 Msa0663220:CDS
TTCTTCTATAAGAATATTTG+AGG 0.430008 4_4:-1896628 Msa0663220:CDS
ATTATATTCCATTCACGGGT+TGG 0.433388 4_4:-1896401 Msa0663220:CDS
ATGATGGAATTGAGAAAAGT+AGG 0.434718 4_4:-1896479 Msa0663220:CDS
GGGAAAAGCTATGAAGATGA+TGG 0.444267 4_4:-1896495 Msa0663220:CDS
TCCCTTTATATTAACTATGT+TGG 0.448332 4_4:-1893724 Msa0663220:three_prime_UTR
TTCTTGTGCTGAGTGATCCC+TGG 0.449195 4_4:+1893789 None:intergenic
ATTGATACATCAATGCTTCC+AGG 0.451374 4_4:-1893807 Msa0663220:CDS
TAAAGGGATGTATCTACTTA+GGG 0.477449 4_4:+1893739 None:intergenic
TCGTGTTGATAGAAATTTCA+AGG 0.488969 4_4:-1896352 Msa0663220:CDS
AATAATCCACCTGGTCCTAA+AGG 0.489084 4_4:-1896972 Msa0663220:CDS
GCTGATTATATTCCATTCAC+GGG 0.489810 4_4:-1896405 Msa0663220:CDS
CTTGGCACAAGTAGTGGGGC+TGG 0.492185 4_4:+1894134 None:intergenic
AATCTTATATGTAAATGCTT+GGG 0.492737 4_4:-1894060 Msa0663220:CDS
TCCTCTTTGCCTTATTGCCA+AGG 0.494491 4_4:-1893763 Msa0663220:CDS
AGAATAGTATGATACACGTT+TGG 0.496908 4_4:+1896647 None:intergenic
TATAAATATGAATGAAGAGT+AGG 0.504481 4_4:-1897116 Msa0663220:five_prime_UTR
TTGGAAATTACCACATGGGT+TGG 0.515330 4_4:-1893841 Msa0663220:CDS
ATTGGAAGGCCTTTAGGACC+AGG 0.515708 4_4:+1896963 None:intergenic
ATTACCACATGGGTTGGTAA+AGG 0.517405 4_4:-1893835 Msa0663220:CDS
GCACAAGTAGTGGGGCTGGT+AGG 0.519799 4_4:+1894138 None:intergenic
TTATCAATCCAACCCGTGAA+TGG 0.521041 4_4:+1896393 None:intergenic
ATCAACTTTGATCACATCAA+AGG 0.524232 4_4:-1896201 Msa0663220:CDS
TCAACTTTGATCACATCAAA+GGG 0.534343 4_4:-1896200 Msa0663220:CDS
ACTTCAACTTGGTTTAAGAC+CGG 0.537882 4_4:-1896856 Msa0663220:CDS
GATTCCCTTGGCACAAGTAG+TGG 0.540797 4_4:+1894128 None:intergenic
ATTCCCTTGGCACAAGTAGT+GGG 0.542954 4_4:+1894129 None:intergenic
GCAACTGCCATAGGTATACT+GGG 0.544044 4_4:+1893906 None:intergenic
AATTTGCCCCAGTATACCTA+TGG 0.547765 4_4:-1893913 Msa0663220:CDS
ATTCTACGACCAGCTCCAAA+TGG 0.551431 4_4:+1893933 None:intergenic
TCTCAAGTACTATAATATGT+AGG 0.552681 4_4:-1896527 Msa0663220:CDS
AGAGCAAATTACTGATGAAG+AGG 0.561913 4_4:-1896277 Msa0663220:CDS
GAACTAATACCATTTGGAGC+TGG 0.562166 4_4:-1893942 Msa0663220:CDS
GCTGAAGAAACAACAATAGC+CGG 0.564239 4_4:+1896837 None:intergenic
GAAGATTCCCTATTATTGGA+AGG 0.567448 4_4:+1896949 None:intergenic
AGAGTAATGAGTAAAGTGAA+AGG 0.578392 4_4:-1894263 Msa0663220:CDS
CAGCCCCACTACTTGTGCCA+AGG 0.578860 4_4:-1894133 Msa0663220:CDS
CCAAACTGATGCTGCTGATG+TGG 0.579162 4_4:+1894313 None:intergenic
TCCAATGAGGCAACTGCCAT+AGG 0.582155 4_4:+1893897 None:intergenic
AGCCCCACTACTTGTGCCAA+GGG 0.589408 4_4:-1894132 Msa0663220:CDS
TAATGTCACTCACCTATGAA+AGG 0.590566 4_4:+1897085 None:intergenic
GGATATGCTTGTAGCTGCAA+CGG 0.600355 4_4:-1894339 Msa0663220:CDS
TGCAAGGATAAGTTCCAATG+AGG 0.607745 4_4:+1893884 None:intergenic
AGAACAAGTAAAAGTAGCAT+CGG 0.610709 4_4:+1897047 None:intergenic
ATGTATCTACTTAGGGACCT+TGG 0.613138 4_4:+1893746 None:intergenic
GATAAGCTCAGAGGATTGCA+TGG 0.614142 4_4:-1896375 Msa0663220:CDS
TTGATTGGAAATTACCACAT+GGG 0.617977 4_4:-1893845 Msa0663220:CDS
TTCCCTTGGCACAAGTAGTG+GGG 0.636396 4_4:+1894130 None:intergenic
TTGATACATCAATGCTTCCA+GGG 0.636673 4_4:-1893806 Msa0663220:CDS
ACGAATAGAGAAGATTTGCA+AGG 0.646616 4_4:+1893868 None:intergenic
TTGTGGAAGAACATAAGCAA+AGG 0.648394 4_4:+1897011 None:intergenic
ACCTTGGCAATAAGGCAAAG+AGG 0.651984 4_4:+1893762 None:intergenic
GGAAGGCCTTTAGGACCAGG+TGG 0.666406 4_4:+1896966 None:intergenic
ACAAATACAAATAATCCACC+TGG 0.672454 4_4:-1896981 Msa0663220:CDS
TTTGATTGGAAATTACCACA+TGG 0.676765 4_4:-1893846 Msa0663220:CDS
CCAAGTTGAAGTGAAAACAA+AGG 0.679336 4_4:+1896867 None:intergenic
GGTTGGATTGATAAGCTCAG+AGG 0.693281 4_4:-1896384 Msa0663220:CDS
TCTTCCTTTACCAACCCATG+TGG 0.699620 4_4:+1893831 None:intergenic
TCACATCAAAGGGATCCTCA+CGG 0.709186 4_4:-1896190 Msa0663220:intron
CAACTGCCATAGGTATACTG+GGG 0.749889 4_4:+1893907 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTCTTTTAAATTTAATAATT+TGG - chr4_4:1894831-1894850 Msa0663220:intron 10.0%
!!! AAAAATTATTGAATATTTTG+AGG - chr4_4:1894947-1894966 Msa0663220:intron 10.0%
!!! TATTTTAAAACAAAATTATG+AGG - chr4_4:1895941-1895960 Msa0663220:intron 10.0%
!! TAAAAAATAGAAAAATAAGT+TGG - chr4_4:1895988-1896007 Msa0663220:intron 10.0%
!! AAAAAATAGAAAAATAAGTT+GGG - chr4_4:1895989-1896008 Msa0663220:intron 10.0%
!!! ATGGATTTTTTTTTTTTTTA+GGG + chr4_4:1896229-1896248 None:intergenic 10.0%
!!! TATGGATTTTTTTTTTTTTT+AGG + chr4_4:1896230-1896249 None:intergenic 10.0%
!! AAAACATATTGTCTTATAAT+GGG - chr4_4:1894050-1894069 Msa0663220:CDS 15.0%
!! TGTATAATATATACTAAAAG+AGG + chr4_4:1894684-1894703 None:intergenic 15.0%
!!! CTTTTAGTATATATTATACA+TGG - chr4_4:1894684-1894703 Msa0663220:intron 15.0%
!!! GAAGTATTTTTTTAATAATG+AGG - chr4_4:1894912-1894931 Msa0663220:intron 15.0%
!! AACATCAAATAAAATTTATC+CGG + chr4_4:1895052-1895071 None:intergenic 15.0%
!! AATTATGTTGAAATAATGTA+TGG + chr4_4:1895144-1895163 None:intergenic 15.0%
!! CTAAAAAACCAAAAAAAAAT+GGG - chr4_4:1895527-1895546 Msa0663220:intron 15.0%
!! AAAAACCCATAAAAATAAAT+GGG - chr4_4:1895589-1895608 Msa0663220:intron 15.0%
!!! GTTTTGATTTTCAATATATA+GGG + chr4_4:1895732-1895751 None:intergenic 15.0%
!!! TGTTTTGATTTTCAATATAT+AGG + chr4_4:1895733-1895752 None:intergenic 15.0%
!!! GAAAGTTCTATAAATTTTAT+TGG - chr4_4:1896821-1896840 Msa0663220:CDS 15.0%
!! TATAAATATGAATGAAGAGT+AGG - chr4_4:1893680-1893699 Msa0663220:three_prime_UTR 20.0%
!!! TTGTATTTGTTTTATGTTTG+TGG + chr4_4:1893805-1893824 None:intergenic 20.0%
!!! ATTGTTTTTGAATACTTCTT+TGG + chr4_4:1893993-1894012 None:intergenic 20.0%
!! CAAAACATATTGTCTTATAA+TGG - chr4_4:1894049-1894068 Msa0663220:CDS 20.0%
!! TTCTTCTATAAGAATATTTG+AGG - chr4_4:1894168-1894187 Msa0663220:CDS 20.0%
!! TAAAGATTCATCAAAAAGTT+TGG - chr4_4:1894743-1894762 Msa0663220:intron 20.0%
!! AAAGATTCATCAAAAAGTTT+GGG - chr4_4:1894744-1894763 Msa0663220:intron 20.0%
!! AATTTGGAGAAATTCTAATA+TGG - chr4_4:1894847-1894866 Msa0663220:intron 20.0%
!!! GTGTCTAAATATTATTGATT+TGG - chr4_4:1894987-1895006 Msa0663220:intron 20.0%
!! GAAAAAAAGACAAATATAGA+TGG + chr4_4:1895227-1895246 None:intergenic 20.0%
!!! GTAAACACTTTAAAACAAAA+AGG + chr4_4:1895249-1895268 None:intergenic 20.0%
!! AGAGATAGATAGTTATAAAA+GGG - chr4_4:1895363-1895382 Msa0663220:intron 20.0%
!!! TTTTTTTTGGTTTTTTAGGT+GGG + chr4_4:1895525-1895544 None:intergenic 20.0%
!!! TTTTTTTTTGGTTTTTTAGG+TGG + chr4_4:1895526-1895545 None:intergenic 20.0%
!!! CCATTTTTTTTTGGTTTTTT+AGG + chr4_4:1895529-1895548 None:intergenic 20.0%
!! CCTAAAAAACCAAAAAAAAA+TGG - chr4_4:1895526-1895545 Msa0663220:intron 20.0%
!! GAAAAACCCATAAAAATAAA+TGG - chr4_4:1895588-1895607 Msa0663220:intron 20.0%
!!! TGAAACCCATTTATTTTTAT+GGG + chr4_4:1895597-1895616 None:intergenic 20.0%
!!! AATTAATATGTTGCACTTTT+TGG - chr4_4:1895766-1895785 Msa0663220:intron 20.0%
!!! TTTTTTTTTAGGGAATTGTA+TGG + chr4_4:1896219-1896238 None:intergenic 20.0%
!!! TTGTTCTATCTTTTATTGTA+TGG + chr4_4:1896248-1896267 None:intergenic 20.0%
!! AAAGGAGAAATAAGAAATTT+GGG - chr4_4:1896551-1896570 Msa0663220:CDS 20.0%
!! ATCGAAAATTGTACTATAAA+TGG - chr4_4:1896692-1896711 Msa0663220:CDS 20.0%
!! AATCTTATATGTAAATGCTT+GGG - chr4_4:1896736-1896755 Msa0663220:CDS 20.0%
!! ACCAACATAGTTAATATAAA+GGG + chr4_4:1897076-1897095 None:intergenic 20.0%
!! AACCAACATAGTTAATATAA+AGG + chr4_4:1897077-1897096 None:intergenic 20.0%
! TCTCAATTCTCAAAGATATA+TGG - chr4_4:1893905-1893924 Msa0663220:CDS 25.0%
! TCTAATAGACCTATATCATA+TGG - chr4_4:1894025-1894044 Msa0663220:CDS 25.0%
!!! ATGTTTTGACCATATGATAT+AGG + chr4_4:1894037-1894056 None:intergenic 25.0%
! TCTCAAGTACTATAATATGT+AGG - chr4_4:1894269-1894288 Msa0663220:CDS 25.0%
! AGAGATTATTGATGAACATT+TGG - chr4_4:1894486-1894505 Msa0663220:intron 25.0%
! TATTAAATTATCATACCGTG+AGG + chr4_4:1894624-1894643 None:intergenic 25.0%
! GAGAGATAGATAGTTATAAA+AGG - chr4_4:1895362-1895381 Msa0663220:intron 25.0%
! GAGATAGATAGTTATAAAAG+GGG - chr4_4:1895364-1895383 Msa0663220:intron 25.0%
!! AGGATATAATTTGTATCACA+TGG - chr4_4:1895404-1895423 Msa0663220:intron 25.0%
! AAAACCAAAAAAAAATGGGT+TGG - chr4_4:1895531-1895550 Msa0663220:intron 25.0%
!! AAACCAAAAAAAAATGGGTT+GGG - chr4_4:1895532-1895551 Msa0663220:intron 25.0%
!!! CTGAAACCCATTTATTTTTA+TGG + chr4_4:1895598-1895617 None:intergenic 25.0%
!! CATAAAAATAAATGGGTTTC+AGG - chr4_4:1895596-1895615 Msa0663220:intron 25.0%
! ATTAACATTATTGGGTAAGT+GGG + chr4_4:1895647-1895666 None:intergenic 25.0%
! TATTAACATTATTGGGTAAG+TGG + chr4_4:1895648-1895667 None:intergenic 25.0%
!!! TACCCTATTTAGTTTGATTT+TGG - chr4_4:1896112-1896131 Msa0663220:intron 25.0%
!!! ACCCTATTTAGTTTGATTTT+GGG - chr4_4:1896113-1896132 Msa0663220:intron 25.0%
! ACCCAAAATCAAACTAAATA+GGG + chr4_4:1896117-1896136 None:intergenic 25.0%
! AACCCAAAATCAAACTAAAT+AGG + chr4_4:1896118-1896137 None:intergenic 25.0%
! CATTGATGAAAAATGAAGTT+TGG - chr4_4:1896391-1896410 Msa0663220:CDS 25.0%
! GAAAGGAGAAATAAGAAATT+TGG - chr4_4:1896550-1896569 Msa0663220:CDS 25.0%
! TTAACTACAGCTTTCAAATA+AGG + chr4_4:1896620-1896639 None:intergenic 25.0%
! CAATCTTATATGTAAATGCT+TGG - chr4_4:1896735-1896754 Msa0663220:CDS 25.0%
!! AGAACTTTCTAAAAATCTCT+CGG + chr4_4:1896810-1896829 None:intergenic 25.0%
! TCCCTTTATATTAACTATGT+TGG - chr4_4:1897072-1897091 Msa0663220:exon 25.0%
! TTTACTCTGCAATGTTTATT+AGG - chr4_4:1897125-1897144 Msa0663220:five_prime_UTR 25.0%
! TTACTCTGCAATGTTTATTA+GGG - chr4_4:1897126-1897145 Msa0663220:five_prime_UTR 25.0%
AGAACAAGTAAAAGTAGCAT+CGG + chr4_4:1893752-1893771 None:intergenic 30.0%
ACAAATACAAATAATCCACC+TGG - chr4_4:1893815-1893834 Msa0663220:CDS 30.0%
TGTAGAAGATTCCCTATTAT+TGG + chr4_4:1893854-1893873 None:intergenic 30.0%
!!! GAAATTGTTTTTGCTCCATA+TGG - chr4_4:1894076-1894095 Msa0663220:CDS 30.0%
AGAATAGTATGATACACGTT+TGG + chr4_4:1894152-1894171 None:intergenic 30.0%
! ATAATATGTAGGACTGCTTT+TGG - chr4_4:1894280-1894299 Msa0663220:CDS 30.0%
!! TAATATGTAGGACTGCTTTT+GGG - chr4_4:1894281-1894300 Msa0663220:CDS 30.0%
! ATGATGGAATTGAGAAAAGT+AGG - chr4_4:1894317-1894336 Msa0663220:CDS 30.0%
ATTGAGAAAAGTAGGTTTCA+TGG - chr4_4:1894325-1894344 Msa0663220:CDS 30.0%
! TGCTGATTATATTCCATTCA+CGG - chr4_4:1894390-1894409 Msa0663220:intron 30.0%
! TCGTGTTGATAGAAATTTCA+AGG - chr4_4:1894444-1894463 Msa0663220:intron 30.0%
!! TCAGTAATTTGCTCTCTATT+TGG + chr4_4:1894514-1894533 None:intergenic 30.0%
ATCAACTTTGATCACATCAA+AGG - chr4_4:1894595-1894614 Msa0663220:intron 30.0%
TCAACTTTGATCACATCAAA+GGG - chr4_4:1894596-1894615 Msa0663220:intron 30.0%
AAGACCAAAGAATTAGTGTT+TGG - chr4_4:1894874-1894893 Msa0663220:intron 30.0%
TGATAGTTTAGTGATGTGAT+AGG + chr4_4:1895192-1895211 None:intergenic 30.0%
ATTGAAGAAAGAGAGAAAGA+GGG + chr4_4:1895322-1895341 None:intergenic 30.0%
TATTGAAGAAAGAGAGAAAG+AGG + chr4_4:1895323-1895342 None:intergenic 30.0%
ATAGATAGTTATAAAAGGGG+AGG - chr4_4:1895367-1895386 Msa0663220:intron 30.0%
TCACTTTCTATCTCATGATT+AGG - chr4_4:1895459-1895478 Msa0663220:intron 30.0%
CACTTTCTATCTCATGATTA+GGG - chr4_4:1895460-1895479 Msa0663220:intron 30.0%
ACTTTCTATCTCATGATTAG+GGG - chr4_4:1895461-1895480 Msa0663220:intron 30.0%
!! AAAAAAAAATGGGTTGGGTT+GGG - chr4_4:1895537-1895556 Msa0663220:intron 30.0%
AACTCAACCCAAAAATTAGT+GGG - chr4_4:1896030-1896049 Msa0663220:intron 30.0%
! TCAAACTAAATAGGGTACTT+CGG + chr4_4:1896109-1896128 None:intergenic 30.0%
AAATGTTGTGTACACTTCTT+TGG + chr4_4:1896195-1896214 None:intergenic 30.0%
! GTTCGTACTCACAATAATTT+TGG - chr4_4:1896308-1896327 Msa0663220:CDS 30.0%
AATTCGTTCTAACAAGATAG+AGG + chr4_4:1896360-1896379 None:intergenic 30.0%
TTCACTTTACTCATTACTCT+TGG + chr4_4:1896533-1896552 None:intergenic 30.0%
AGAGTAATGAGTAAAGTGAA+AGG - chr4_4:1896533-1896552 Msa0663220:CDS 30.0%
ACATATAAGATTGTCTTTGC+TGG + chr4_4:1896728-1896747 None:intergenic 30.0%
! GAACTTTCTAAAAATCTCTC+GGG + chr4_4:1896809-1896828 None:intergenic 30.0%
ATCTTCTCTATTCGTTTGAT+TGG - chr4_4:1896936-1896955 Msa0663220:CDS 30.0%
TTTGATTGGAAATTACCACA+TGG - chr4_4:1896950-1896969 Msa0663220:CDS 30.0%
TTGATTGGAAATTACCACAT+GGG - chr4_4:1896951-1896970 Msa0663220:CDS 30.0%
TAAAGGGATGTATCTACTTA+GGG + chr4_4:1897060-1897079 None:intergenic 30.0%
ATAAAGGGATGTATCTACTT+AGG + chr4_4:1897061-1897080 None:intergenic 30.0%
TAGGATTCTCTTCCTTTCAT+AGG - chr4_4:1893699-1893718 Msa0663220:three_prime_UTR 35.0%
TAATGTCACTCACCTATGAA+AGG + chr4_4:1893714-1893733 None:intergenic 35.0%
TTGTGGAAGAACATAAGCAA+AGG + chr4_4:1893788-1893807 None:intergenic 35.0%
CTAAAGGCCTTCCAATAATA+GGG - chr4_4:1893840-1893859 Msa0663220:CDS 35.0%
GAAGATTCCCTATTATTGGA+AGG + chr4_4:1893850-1893869 None:intergenic 35.0%
! CCAAGTTGAAGTGAAAACAA+AGG + chr4_4:1893932-1893951 None:intergenic 35.0%
!!! CCTTTGTTTTCACTTCAACT+TGG - chr4_4:1893929-1893948 Msa0663220:CDS 35.0%
! ACTTCAACTTGGTTTAAGAC+CGG - chr4_4:1893940-1893959 Msa0663220:CDS 35.0%
! TTGCTCCATATGGTGATTTT+TGG - chr4_4:1894086-1894105 Msa0663220:CDS 35.0%
TCTCTCCAAAAATCACCATA+TGG + chr4_4:1894094-1894113 None:intergenic 35.0%
GCTGATTATATTCCATTCAC+GGG - chr4_4:1894391-1894410 Msa0663220:intron 35.0%
ATTATATTCCATTCACGGGT+TGG - chr4_4:1894395-1894414 Msa0663220:intron 35.0%
AGAGCAAATTACTGATGAAG+AGG - chr4_4:1894519-1894538 Msa0663220:intron 35.0%
GTGACCAAACACTAATTCTT+TGG + chr4_4:1894881-1894900 None:intergenic 35.0%
!! TTGATTTGGTCTTGTGATCA+TGG - chr4_4:1895001-1895020 Msa0663220:intron 35.0%
GAGGAAAAGGAGAAAAGATA+AGG + chr4_4:1895293-1895312 None:intergenic 35.0%
!!! CAACCCAACCCATTTTTTTT+TGG + chr4_4:1895538-1895557 None:intergenic 35.0%
!! CAAAAAAAAATGGGTTGGGT+TGG - chr4_4:1895536-1895555 Msa0663220:intron 35.0%
!!! TAAGTGGGTTTTTTGGGTTT+GGG + chr4_4:1895632-1895651 None:intergenic 35.0%
!!! ATTGGGTAAGTGGGTTTTTT+GGG + chr4_4:1895638-1895657 None:intergenic 35.0%
!!! TATTGGGTAAGTGGGTTTTT+TGG + chr4_4:1895639-1895658 None:intergenic 35.0%
!!! TTTTTGGGTTGAGTTGGATT+GGG + chr4_4:1896025-1896044 None:intergenic 35.0%
!!! ATTTTTGGGTTGAGTTGGAT+TGG + chr4_4:1896026-1896045 None:intergenic 35.0%
!!! CACTAATTTTTGGGTTGAGT+TGG + chr4_4:1896031-1896050 None:intergenic 35.0%
CAACTCAACCCAAAAATTAG+TGG - chr4_4:1896029-1896048 Msa0663220:intron 35.0%
! TTATACTATTGGGTGGGTTT+GGG + chr4_4:1896060-1896079 None:intergenic 35.0%
AAACCCACCCAATAGTATAA+CGG - chr4_4:1896060-1896079 Msa0663220:intron 35.0%
TAACCACCCGTTATACTATT+GGG + chr4_4:1896070-1896089 None:intergenic 35.0%
ATAACCACCCGTTATACTAT+TGG + chr4_4:1896071-1896090 None:intergenic 35.0%
! TAAATAGGGTACTTCGGTTT+GGG + chr4_4:1896103-1896122 None:intergenic 35.0%
TGGTGTATGTATCATGAGTA+GGG + chr4_4:1896175-1896194 None:intergenic 35.0%
TTGGTGTATGTATCATGAGT+AGG + chr4_4:1896176-1896195 None:intergenic 35.0%
!! TAGAACAACTTTTCTAGCAG+TGG - chr4_4:1896260-1896279 Msa0663220:CDS 35.0%
! TTTCTAGCAGTGGTAAGTAA+AGG - chr4_4:1896270-1896289 Msa0663220:CDS 35.0%
! ATCATAAAGCACCTCTTTAC+AGG - chr4_4:1896436-1896455 Msa0663220:CDS 35.0%
TACAAGCATATCCTGTAAAG+AGG + chr4_4:1896450-1896469 None:intergenic 35.0%
! CAATTTTCGATAGATTCCCT+TGG + chr4_4:1896683-1896702 None:intergenic 35.0%
TTCAGAGAGATCCAGATATT+TGG - chr4_4:1896762-1896781 Msa0663220:CDS 35.0%
TCTGGGTTTATCCAAATATC+TGG + chr4_4:1896776-1896795 None:intergenic 35.0%
TCTCGGGATAAAATTCTTCT+GGG + chr4_4:1896793-1896812 None:intergenic 35.0%
GACTTCGAACTAATACCATT+TGG - chr4_4:1896848-1896867 Msa0663220:CDS 35.0%
ACGAATAGAGAAGATTTGCA+AGG + chr4_4:1896931-1896950 None:intergenic 35.0%
ATTGATACATCAATGCTTCC+AGG - chr4_4:1896989-1897008 Msa0663220:CDS 35.0%
TTGATACATCAATGCTTCCA+GGG - chr4_4:1896990-1897009 Msa0663220:CDS 35.0%
AATAATCCACCTGGTCCTAA+AGG - chr4_4:1893824-1893843 Msa0663220:CDS 40.0%
CCTATTATTGGAAGGCCTTT+AGG + chr4_4:1893842-1893861 None:intergenic 40.0%
CCTAAAGGCCTTCCAATAAT+AGG - chr4_4:1893839-1893858 Msa0663220:CDS 40.0%
GCTGAAGAAACAACAATAGC+CGG + chr4_4:1893962-1893981 None:intergenic 40.0%
GGGAAAAGCTATGAAGATGA+TGG - chr4_4:1894301-1894320 Msa0663220:CDS 40.0%
!! AAAAAAGCTTGCTGCAAGCA+AGG + chr4_4:1894371-1894390 None:intergenic 40.0%
TTATCAATCCAACCCGTGAA+TGG + chr4_4:1894406-1894425 None:intergenic 40.0%
GTGATCATGGAAGAATACCT+CGG - chr4_4:1895014-1895033 Msa0663220:intron 40.0%
! AGAAATGCCAACTTTTGCGT+GGG + chr4_4:1895078-1895097 None:intergenic 40.0%
GGGAGGAAAGTAAAAAGAAG+AGG - chr4_4:1895384-1895403 Msa0663220:intron 40.0%
!! TCATGATTAGGGGTGTTCAT+GGG - chr4_4:1895471-1895490 Msa0663220:intron 40.0%
!!! TTTTTTAGGTGGGTTTGACC+GGG + chr4_4:1895515-1895534 None:intergenic 40.0%
!!! GTTTTTTAGGTGGGTTTGAC+CGG + chr4_4:1895516-1895535 None:intergenic 40.0%
!!! GTAAGTGGGTTTTTTGGGTT+TGG + chr4_4:1895633-1895652 None:intergenic 40.0%
!! GTTGAGTTGGATTGGGTAAT+GGG + chr4_4:1896018-1896037 None:intergenic 40.0%
! GGGCAAACCCACTAATTTTT+GGG + chr4_4:1896040-1896059 None:intergenic 40.0%
! TGGGCAAACCCACTAATTTT+TGG + chr4_4:1896041-1896060 None:intergenic 40.0%
! GTTATACTATTGGGTGGGTT+TGG + chr4_4:1896061-1896080 None:intergenic 40.0%
AACCCACCCAATAGTATAAC+GGG - chr4_4:1896061-1896080 Msa0663220:intron 40.0%
! CTAAATAGGGTACTTCGGTT+TGG + chr4_4:1896104-1896123 None:intergenic 40.0%
GGTGTATGTATCATGAGTAG+GGG + chr4_4:1896174-1896193 None:intergenic 40.0%
CTCTCGGGATAAAATTCTTC+TGG + chr4_4:1896794-1896813 None:intergenic 40.0%
! GAACTAATACCATTTGGAGC+TGG - chr4_4:1896854-1896873 Msa0663220:CDS 40.0%
AATTTGCCCCAGTATACCTA+TGG - chr4_4:1896883-1896902 Msa0663220:CDS 40.0%
TGCAAGGATAAGTTCCAATG+AGG + chr4_4:1896915-1896934 None:intergenic 40.0%
TTGGAAATTACCACATGGGT+TGG - chr4_4:1896955-1896974 Msa0663220:CDS 40.0%
!! ATTACCACATGGGTTGGTAA+AGG - chr4_4:1896961-1896980 Msa0663220:CDS 40.0%
ATGTATCTACTTAGGGACCT+TGG + chr4_4:1897053-1897072 None:intergenic 40.0%
GGTTGGATTGATAAGCTCAG+AGG - chr4_4:1894412-1894431 Msa0663220:intron 45.0%
GATAAGCTCAGAGGATTGCA+TGG - chr4_4:1894421-1894440 Msa0663220:intron 45.0%
TCACATCAAAGGGATCCTCA+CGG - chr4_4:1894606-1894625 Msa0663220:intron 45.0%
! ACCTCGGTAATTTGTGTGTC+CGG - chr4_4:1895030-1895049 Msa0663220:intron 45.0%
! GAGAAATGCCAACTTTTGCG+TGG + chr4_4:1895079-1895098 None:intergenic 45.0%
AAGAGGGTCAAGAGAGGAAA+AGG + chr4_4:1895306-1895325 None:intergenic 45.0%
!! CTCATGATTAGGGGTGTTCA+TGG - chr4_4:1895470-1895489 Msa0663220:intron 45.0%
!! ATTAGGGGTGTTCATGGGTT+GGG - chr4_4:1895476-1895495 Msa0663220:intron 45.0%
TTGGGTCAACCTAGAAAACC+CGG - chr4_4:1895494-1895513 Msa0663220:intron 45.0%
!! AATGGGTTGGGTTGGGTAAA+TGG - chr4_4:1895544-1895563 Msa0663220:intron 45.0%
!! ATGGGTTGGGTTGGGTAAAT+GGG - chr4_4:1895545-1895564 Msa0663220:intron 45.0%
!! GGTTGAGTTGGATTGGGTAA+TGG + chr4_4:1896019-1896038 None:intergenic 45.0%
CACCCGTTATACTATTGGGT+GGG + chr4_4:1896066-1896085 None:intergenic 45.0%
!! GGGTGAGTTTGAGTTGAGAT+TGG + chr4_4:1896144-1896163 None:intergenic 45.0%
GGATATGCTTGTAGCTGCAA+CGG - chr4_4:1896457-1896476 Msa0663220:CDS 45.0%
CACATCAGCAGCATCAGTTT+GGG - chr4_4:1896484-1896503 Msa0663220:CDS 45.0%
ATTCCCTTGGCACAAGTAGT+GGG + chr4_4:1896670-1896689 None:intergenic 45.0%
ATTCTACGACCAGCTCCAAA+TGG + chr4_4:1896866-1896885 None:intergenic 45.0%
CAACTGCCATAGGTATACTG+GGG + chr4_4:1896892-1896911 None:intergenic 45.0%
GCAACTGCCATAGGTATACT+GGG + chr4_4:1896893-1896912 None:intergenic 45.0%
TCTTCCTTTACCAACCCATG+TGG + chr4_4:1896968-1896987 None:intergenic 45.0%
! TCCTCTTTGCCTTATTGCCA+AGG - chr4_4:1897033-1897052 Msa0663220:CDS 45.0%
ACCTTGGCAATAAGGCAAAG+AGG + chr4_4:1897037-1897056 None:intergenic 45.0%
ACTTAGGGACCTTGGCAATA+AGG + chr4_4:1897045-1897064 None:intergenic 45.0%
!! AAAAAAAAAAAAGTTTAAAA+GGG + chr4_4:1894652-1894671 None:intergenic 5.0%
!! AAAAAAAAAAAAAGTTTAAA+AGG + chr4_4:1894653-1894672 None:intergenic 5.0%
!! TAAAAAATATTAACATTATT+GGG + chr4_4:1895655-1895674 None:intergenic 5.0%
!! ATAAAAAATATTAACATTAT+TGG + chr4_4:1895656-1895675 None:intergenic 5.0%
!! ATTGGAAGGCCTTTAGGACC+AGG + chr4_4:1893836-1893855 None:intergenic 50.0%
TCCGGACACACAAATTACCG+AGG + chr4_4:1895034-1895053 None:intergenic 50.0%
TGTTGTGCCCACGCAAAAGT+TGG - chr4_4:1895068-1895087 Msa0663220:intron 50.0%
GAGAGAAAGAGGGTCAAGAG+AGG + chr4_4:1895312-1895331 None:intergenic 50.0%
!! GATTAGGGGTGTTCATGGGT+TGG - chr4_4:1895475-1895494 Msa0663220:intron 50.0%
! TGGGTTTGACCGGGTTTTCT+AGG + chr4_4:1895506-1895525 None:intergenic 50.0%
!! GTTGGGTTGGGTAAATGGGT+GGG - chr4_4:1895549-1895568 Msa0663220:intron 50.0%
GTTGGGTAAATGGGTGGGTA+TGG - chr4_4:1895554-1895573 Msa0663220:intron 50.0%
!!! GGGTTTTTTGGGTTTGGGTC+TGG + chr4_4:1895627-1895646 None:intergenic 50.0%
CCACCCGTTATACTATTGGG+TGG + chr4_4:1896067-1896086 None:intergenic 50.0%
! CCACCCAATAGTATAACGGG+TGG - chr4_4:1896064-1896083 Msa0663220:intron 50.0%
!! TCATGAGTAGGGGTGTTCGT+GGG + chr4_4:1896164-1896183 None:intergenic 50.0%
!! ATCATGAGTAGGGGTGTTCG+TGG + chr4_4:1896165-1896184 None:intergenic 50.0%
CCAAACTGATGCTGCTGATG+TGG + chr4_4:1896486-1896505 None:intergenic 50.0%
CCACATCAGCAGCATCAGTT+TGG - chr4_4:1896483-1896502 Msa0663220:CDS 50.0%
TTCCCTTGGCACAAGTAGTG+GGG + chr4_4:1896669-1896688 None:intergenic 50.0%
GATTCCCTTGGCACAAGTAG+TGG + chr4_4:1896671-1896690 None:intergenic 50.0%
GGCAACTGCCATAGGTATAC+TGG + chr4_4:1896894-1896913 None:intergenic 50.0%
ACCTATGGCAGTTGCCTCAT+TGG - chr4_4:1896898-1896917 Msa0663220:CDS 50.0%
TCCAATGAGGCAACTGCCAT+AGG + chr4_4:1896902-1896921 None:intergenic 50.0%
TTCTTGTGCTGAGTGATCCC+TGG + chr4_4:1897010-1897029 None:intergenic 50.0%
!! GGTTGGGTTGGGTAAATGGG+TGG - chr4_4:1895548-1895567 Msa0663220:intron 55.0%
AGCCCCACTACTTGTGCCAA+GGG - chr4_4:1896664-1896683 Msa0663220:CDS 55.0%
!! GGAAGGCCTTTAGGACCAGG+TGG + chr4_4:1893833-1893852 None:intergenic 60.0%
! GCACAAGTAGTGGGGCTGGT+AGG + chr4_4:1896661-1896680 None:intergenic 60.0%
! CTTGGCACAAGTAGTGGGGC+TGG + chr4_4:1896665-1896684 None:intergenic 60.0%
CAGCCCCACTACTTGTGCCA+AGG - chr4_4:1896663-1896682 Msa0663220:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 1893659 1897159 1893659 ID=Msa0663220;Name=Msa0663220
chr4_4 mRNA 1893659 1897159 1893659 ID=Msa0663220-mRNA-1;Parent=Msa0663220;Name=Msa0663220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=84|1|1|1|1|1|2|93|497
chr4_4 exon 1893659 1894360 1893659 ID=Msa0663220-mRNA-1:exon:522;Parent=Msa0663220-mRNA-1
chr4_4 exon 1896191 1897159 1896191 ID=Msa0663220-mRNA-1:exon:521;Parent=Msa0663220-mRNA-1
chr4_4 five_prime_UTR 1897076 1897159 1897076 ID=Msa0663220-mRNA-1:five_prime_utr;Parent=Msa0663220-mRNA-1
chr4_4 CDS 1896191 1897075 1896191 ID=Msa0663220-mRNA-1:cds;Parent=Msa0663220-mRNA-1
chr4_4 CDS 1893752 1894360 1893752 ID=Msa0663220-mRNA-1:cds;Parent=Msa0663220-mRNA-1
chr4_4 three_prime_UTR 1893659 1893751 1893659 ID=Msa0663220-mRNA-1:three_prime_utr;Parent=Msa0663220-mRNA-1
Gene Sequence

>Msa0663220

ATGTTGCCGATGCTACTTTTACTTGTTCTGTGTCTAACTCTACCTTTGCTTATGTTCTTCCACAAACATAAAACAAATACAAATAATCCACCTGGTCCTAAAGGCCTTCCAATAATAGGGAATCTTCTACAACTAGATATCTCAAATCTTCATCTTCAATTTTCTCAATTCTCAAAGATATATGGTCCTTTGTTTTCACTTCAACTTGGTTTAAGACCGGCTATTGTTGTTTCTTCAGCTGAAATTGCCAAAGAAGTATTCAAAAACAATGATCATGTGTTTTCTAATAGACCTATATCATATGGTCAAAACATATTGTCTTATAATGGGTCAGAAATTGTTTTTGCTCCATATGGTGATTTTTGGAGAGAAATAAGAAAAATTTGTGCTATTCATATTTTTAGTTCCAAACGTGTATCATACTATTCTTCTATAAGAATATTTGAGGTGAAGAAAATGATCAAAAATATTTCAGTGCATGCTGATTCTTCAAATGTTACAAATTTGAGTGAGTTGTTGATTTCACTCTCAAGTACTATAATATGTAGGACTGCTTTTGGGAAAAGCTATGAAGATGATGGAATTGAGAAAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCCTTGCTTGCAGCAAGCTTTTTTGCTGATTATATTCCATTCACGGGTTGGATTGATAAGCTCAGAGGATTGCATGGTCGTGTTGATAGAAATTTCAAGGAATTTGATGAATTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGAGAGCAAATTACTGATGAAGAGGATATTGTTGATGTCTTACTTGAACTCAAGAAAAAACGCTCATTTTCATTTGATATCAACTTTGATCACATCAAAGGGATCCTCACGGATATGCTTGTAGCTGCAACGGATACCACATCAGCAGCATCAGTTTGGGCTATGACTGCTCTAATAAAAAATCCAAGAGTAATGAGTAAAGTGAAAGGAGAAATAAGAAATTTGGGAGTTAAAAAAGATTTTTTATATGAAGATGATATTCAAAATTGTCCTTATTTGAAAGCTGTAGTTAAAGAGACACTAAGATTACACCTACCAGCCCCACTACTTGTGCCAAGGGAATCTATCGAAAATTGTACTATAAATGGATACAACATTCCAGCAAAGACAATCTTATATGTAAATGCTTGGGCTATTCAGAGAGATCCAGATATTTGGATAAACCCAGAAGAATTTTATCCCGAGAGATTTTTAGAAAGTTCTATAAATTTTATTGGACAAGACTTCGAACTAATACCATTTGGAGCTGGTCGTAGAATTTGCCCCAGTATACCTATGGCAGTTGCCTCATTGGAACTTATCCTTGCAAATCTTCTCTATTCGTTTGATTGGAAATTACCACATGGGTTGGTAAAGGAAGATATTGATACATCAATGCTTCCAGGGATCACTCAGCACAAGAAGAATCCTCTTTGCCTTATTGCCAAGGTCCCTAAGTAG
Protein sequence

>Msa0663220

MLPMLLLLVLCLTLPLLMFFHKHKTNTNNPPGPKGLPIIGNLLQLDISNLHLQFSQFSKIYGPLFSLQLGLRPAIVVSSAEIAKEVFKNNDHVFSNRPISYGQNILSYNGSEIVFAPYGDFWREIRKICAIHIFSSKRVSYYSSIRIFEVKKMIKNISVHADSSNVTNLSELLISLSSTIICRTAFGKSYEDDGIEKSRFHGLLHEFQALLAASFFADYIPFTGWIDKLRGLHGRVDRNFKEFDEFYQEIIDEHLDPNREQITDEEDIVDVLLELKKKRSFSFDINFDHIKGILTDMLVAATDTTSAASVWAMTALIKNPRVMSKVKGEIRNLGVKKDFLYEDDIQNCPYLKAVVKETLRLHLPAPLLVPRESIENCTINGYNIPAKTILYVNAWAIQRDPDIWINPEEFYPERFLESSINFIGQDFELIPFGAGRRICPSIPMAVASLELILANLLYSFDWKLPHGLVKEDIDTSMLPGITQHKKNPLCLIAKVPK*