AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0537340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537340 MtrunA17_Chr4g0011901 94.167 480 28 0 18 497 18 497 0.0 915
Msa0537340 MtrunA17_Chr4g0011961 80.040 496 98 1 1 496 1 495 0.0 814
Msa0537340 MtrunA17_Chr4g0011921 78.586 495 106 0 1 495 1 495 0.0 798
Msa0537340 MtrunA17_Chr4g0011981 79.916 478 96 0 19 496 19 496 0.0 775
Msa0537340 MtrunA17_Chr4g0011881 76.337 486 112 2 13 496 12 496 0.0 738
Msa0537340 MtrunA17_Chr5g0419691 73.589 496 131 0 1 496 1 496 0.0 736
Msa0537340 MtrunA17_Chr4g0011871 73.239 497 132 1 1 496 1 497 0.0 731
Msa0537340 MtrunA17_Chr5g0406651 76.495 485 112 1 14 496 13 497 0.0 721
Msa0537340 MtrunA17_Chr7g0218601 58.230 486 193 4 16 494 15 497 0.0 597
Msa0537340 MtrunA17_Chr7g0218611 59.916 479 185 3 22 494 21 498 0.0 592
Msa0537340 MtrunA17_Chr5g0431501 54.818 467 209 2 30 494 34 500 0.0 538
Msa0537340 MtrunA17_Chr5g0431461 54.818 467 209 2 30 494 34 500 0.0 538
Msa0537340 MtrunA17_Chr5g0431511 54.176 467 212 2 30 494 34 500 0.0 534
Msa0537340 MtrunA17_Chr1g0156101 53.719 484 211 3 27 497 30 513 0.0 531
Msa0537340 MtrunA17_Chr1g0156081 53.512 484 212 4 27 497 54 537 2.42e-174 501
Msa0537340 MtrunA17_Chr4g0011931 82.993 294 50 0 1 294 1 294 1.36e-171 485
Msa0537340 MtrunA17_Chr4g0011861 74.815 270 67 1 26 294 26 295 4.98e-145 418
Msa0537340 MtrunA17_Chr1g0156061 48.085 470 182 4 27 492 53 464 5.67e-145 424
Msa0537340 MtrunA17_Chr4g0047631 42.800 500 272 5 1 493 17 509 3.24e-140 413
Msa0537340 MtrunA17_Chr4g0047661 42.515 501 276 5 2 493 17 514 4.09e-139 410
Msa0537340 MtrunA17_Chr3g0116681 41.700 494 281 5 3 494 13 501 1.40e-138 409
Msa0537340 MtrunA17_Chr4g0047641 44.025 477 250 7 25 493 46 513 8.29e-137 405
Msa0537340 MtrunA17_Chr4g0058231 42.574 505 272 7 1 495 1 497 2.28e-136 403
Msa0537340 MtrunA17_Chr5g0445381 43.381 491 269 5 4 492 44 527 2.29e-134 399
Msa0537340 MtrunA17_Chr5g0445461 42.713 494 271 6 1 492 13 496 4.37e-134 397
Msa0537340 MtrunA17_Chr3g0101691 43.320 494 268 4 5 492 14 501 4.60e-134 397
Msa0537340 MtrunA17_Chr5g0445441 43.177 491 270 5 4 492 54 537 1.10e-132 395
Msa0537340 MtrunA17_Chr5g0445451 42.713 494 271 6 1 492 13 496 2.93e-132 392
Msa0537340 MtrunA17_Chr4g0047691 41.750 503 275 5 2 493 17 512 4.11e-132 393
Msa0537340 MtrunA17_Chr6g0472311 41.304 506 278 7 4 493 12 514 5.66e-131 390
Msa0537340 MtrunA17_Chr4g0058191 41.296 494 276 7 4 493 2 485 2.28e-130 387
Msa0537340 MtrunA17_Chr3g0116741 41.785 493 275 6 4 491 26 511 3.02e-130 388
Msa0537340 MtrunA17_Chr3g0101711 40.882 499 282 5 5 496 13 505 1.07e-129 386
Msa0537340 MtrunA17_Chr3g0101731 41.737 472 265 3 28 495 35 500 4.17e-129 384
Msa0537340 MtrunA17_Chr4g0058201 40.966 476 277 3 19 493 18 490 5.66e-129 384
Msa0537340 MtrunA17_Chr8g0361471 40.162 493 283 4 6 492 11 497 9.74e-128 381
Msa0537340 MtrunA17_Chr5g0445531 42.489 466 260 4 28 492 37 495 1.39e-127 380
Msa0537340 MtrunA17_Chr5g0446161 41.903 494 269 7 6 492 14 496 2.00e-127 380
Msa0537340 MtrunA17_Chr3g0101701 41.296 494 278 4 5 492 14 501 2.16e-127 380
Msa0537340 MtrunA17_Chr3g0101721 41.336 479 264 4 22 492 30 499 6.38e-127 379
Msa0537340 MtrunA17_Chr4g0024771 40.688 494 281 6 1 492 13 496 7.02e-127 379
Msa0537340 MtrunA17_Chr5g0431671 41.300 477 262 8 23 492 32 497 8.34e-127 379
Msa0537340 MtrunA17_Chr3g0101631 41.948 503 262 7 7 492 3 492 1.31e-126 378
Msa0537340 MtrunA17_Chr5g0445421 42.308 494 252 8 1 492 87 549 2.92e-126 379
Msa0537340 MtrunA17_Chr5g0431641 40.688 494 278 7 4 492 13 496 3.34e-126 377
Msa0537340 MtrunA17_Chr6g0466331 39.554 493 286 4 6 492 11 497 4.79e-126 377
Msa0537340 MtrunA17_Chr3g0101651 41.093 494 279 4 5 492 14 501 6.19e-126 377
Msa0537340 MtrunA17_Chr5g0403331 42.526 475 257 5 30 495 36 503 7.31e-126 376
Msa0537340 MtrunA17_Chr6g0465511 39.554 493 286 4 6 492 11 497 7.46e-126 376
Msa0537340 MtrunA17_Chr4g0058261 41.509 477 269 5 22 491 55 528 1.62e-125 376
Msa0537340 MtrunA17_Chr5g0403321 40.657 487 274 4 19 495 24 505 1.72e-125 375
Msa0537340 MtrunA17_Chr3g0101671 39.271 494 287 5 6 492 14 501 4.38e-124 372
Msa0537340 MtrunA17_Chr5g0403351 39.683 504 285 6 1 495 9 502 6.66e-124 371
Msa0537340 MtrunA17_Chr2g0310391 38.241 489 295 4 5 489 1 486 3.58e-123 369
Msa0537340 MtrunA17_Chr3g0101661 39.351 493 288 4 5 492 14 500 3.72e-123 370
Msa0537340 MtrunA17_Chr5g0446151 41.189 471 264 5 25 492 37 497 6.40e-123 369
Msa0537340 MtrunA17_Chr4g0058281 40.726 496 283 7 3 491 18 509 2.58e-122 367
Msa0537340 MtrunA17_Chr3g0101611 40.592 473 269 4 25 492 34 499 5.00e-122 367
Msa0537340 MtrunA17_Chr3g0101581 38.586 495 296 4 1 492 9 498 8.82e-122 366
Msa0537340 MtrunA17_Chr4g0020041 39.960 498 287 4 4 496 12 502 3.87e-121 364
Msa0537340 MtrunA17_Chr4g0011941 85.000 200 30 0 297 496 1 200 5.50e-121 352
Msa0537340 MtrunA17_Chr3g0101601 41.129 496 272 7 4 492 11 493 6.31e-121 363
Msa0537340 MtrunA17_Chr3g0101571 39.149 470 276 5 26 492 33 495 6.35e-121 363
Msa0537340 MtrunA17_Chr3g0101811 39.919 491 271 4 20 492 28 512 2.90e-120 362
Msa0537340 MtrunA17_Chr2g0310381 37.423 489 304 2 4 492 3 489 4.35e-120 361
Msa0537340 MtrunA17_Chr1g0162801 41.046 497 280 5 6 496 14 503 6.13e-120 361
Msa0537340 MtrunA17_Chr3g0101751 40.275 509 281 5 4 495 5 507 1.17e-119 360
Msa0537340 MtrunA17_Chr4g0076161 41.833 502 263 10 5 492 13 499 1.28e-119 360
Msa0537340 MtrunA17_Chr1g0162811 39.802 505 285 6 3 496 4 500 3.12e-119 359
Msa0537340 MtrunA17_Chr3g0101621 41.983 474 258 6 23 492 27 487 4.96e-119 358
Msa0537340 MtrunA17_Chr6g0463801 41.139 474 270 5 20 492 28 493 9.22e-119 358
Msa0537340 MtrunA17_Chr3g0101821 40.396 505 272 5 7 491 1 496 6.33e-118 356
Msa0537340 MtrunA17_Chr1g0167321 42.545 503 264 6 6 496 11 500 2.20e-117 354
Msa0537340 MtrunA17_Chr3g0101801 40.121 496 286 4 2 492 15 504 3.35e-117 354
Msa0537340 MtrunA17_Chr3g0101761 41.200 500 281 5 2 495 8 500 4.59e-117 353
Msa0537340 MtrunA17_Chr8g0382901 38.254 481 292 4 12 492 475 950 4.39e-116 364
Msa0537340 MtrunA17_Chr8g0382901 37.320 485 282 5 9 492 8 471 1.04e-108 345
Msa0537340 MtrunA17_Chr4g0011851 76.812 207 48 0 290 496 9 215 7.18e-114 335
Msa0537340 MtrunA17_Chr3g0101831 41.176 476 270 3 20 491 28 497 1.64e-113 345
Msa0537340 MtrunA17_Chr6g0484841 38.017 484 284 7 18 492 24 500 2.60e-113 344
Msa0537340 MtrunA17_Chr6g0463791 43.129 473 246 10 30 492 36 495 4.46e-113 343
Msa0537340 MtrunA17_Chr6g0484811 37.603 484 287 7 2 476 8 485 4.64e-112 341
Msa0537340 MtrunA17_Chr8g0357421 41.509 477 270 3 22 495 30 500 3.69e-111 338
Msa0537340 MtrunA17_Chr5g0405001 37.450 502 293 10 3 492 17 509 1.02e-110 338
Msa0537340 MtrunA17_Chr2g0280261 41.015 473 264 4 24 492 29 490 1.99e-110 336
Msa0537340 MtrunA17_Chr8g0344181 37.632 473 284 6 28 494 37 504 6.36e-110 335
Msa0537340 MtrunA17_Chr8g0357431 40.795 478 273 3 22 495 30 501 5.75e-109 333
Msa0537340 MtrunA17_Chr5g0430101 39.024 492 278 9 1 482 8 487 3.63e-108 331
Msa0537340 MtrunA17_Chr5g0430031 39.157 498 288 9 4 492 9 500 4.45e-108 331
Msa0537340 MtrunA17_Chr5g0430131 40.381 473 267 8 18 482 24 489 1.77e-107 329
Msa0537340 MtrunA17_Chr8g0344151 36.709 474 287 7 28 494 35 502 2.24e-107 329
Msa0537340 MtrunA17_Chr4g0035921 35.412 497 292 11 5 482 13 499 1.40e-106 327
Msa0537340 MtrunA17_Chr3g0094231 37.313 469 282 9 25 489 32 492 4.11e-106 325
Msa0537340 MtrunA17_Chr3g0101741 39.486 428 246 4 67 492 3 419 4.02e-105 320
Msa0537340 MtrunA17_Chr3g0094171 38.298 470 276 7 30 492 41 503 1.05e-104 322
Msa0537340 MtrunA17_Chr8g0372251 38.316 475 272 9 30 492 36 501 3.07e-104 321
Msa0537340 MtrunA17_Chr3g0086651 36.492 496 304 4 8 494 11 504 3.42e-104 321
Msa0537340 MtrunA17_Chr3g0086661 36.473 499 306 4 5 494 8 504 1.93e-103 319
Msa0537340 MtrunA17_Chr5g0430081 37.014 489 291 7 4 482 7 488 1.84e-102 316
Msa0537340 MtrunA17_Chr8g0390881 35.569 492 299 8 2 482 6 490 1.02e-101 314
Msa0537340 MtrunA17_Chr4g0057001 35.833 480 298 6 16 492 37 509 1.36e-101 314
Msa0537340 MtrunA17_Chr7g0254641 35.967 481 292 8 27 494 35 512 2.86e-101 313
Msa0537340 MtrunA17_Chr8g0344191 36.089 496 301 9 8 492 44 534 9.05e-101 313
Msa0537340 MtrunA17_Chr3g0086691 36.809 470 278 7 38 494 41 504 3.91e-100 310
Msa0537340 MtrunA17_Chr5g0430091 37.214 481 288 6 1 474 9 482 3.98e-100 310
Msa0537340 MtrunA17_Chr4g0061381 35.991 464 278 7 38 489 40 496 4.72e-99 307
Msa0537340 MtrunA17_Chr5g0395331 36.324 457 283 5 22 474 30 482 8.07e-99 306
Msa0537340 MtrunA17_Chr1g0205361 34.343 495 317 5 5 496 8 497 1.63e-98 306
Msa0537340 MtrunA17_Chr7g0255531 33.597 506 303 9 8 493 1 493 3.23e-98 305
Msa0537340 MtrunA17_Chr5g0401681 37.751 498 287 9 5 495 8 489 5.32e-98 304
Msa0537340 MtrunA17_Chr7g0246221 35.174 489 301 7 5 482 6 489 8.77e-97 301
Msa0537340 MtrunA17_Chr1g0160851 33.537 492 317 6 5 492 8 493 9.43e-97 301
Msa0537340 MtrunA17_Chr1g0174441 35.021 474 292 8 4 464 27 497 1.20e-96 302
Msa0537340 MtrunA17_Chr1g0174461 34.292 487 309 6 2 479 8 492 3.11e-96 300
Msa0537340 MtrunA17_Chr1g0164211 35.158 475 300 5 19 492 23 490 1.28e-95 298
Msa0537340 MtrunA17_Chr5g0395321 34.105 475 296 6 4 474 14 475 3.56e-95 298
Msa0537340 MtrunA17_Chr8g0356001 33.737 495 316 7 6 492 12 502 4.78e-95 297
Msa0537340 MtrunA17_Chr1g0205371 35.700 493 308 6 4 492 7 494 6.35e-95 296
Msa0537340 MtrunA17_Chr3g0084921 34.980 506 303 9 4 492 10 506 4.78e-94 295
Msa0537340 MtrunA17_Chr1g0174481 33.613 476 306 6 21 492 26 495 5.39e-94 294
Msa0537340 MtrunA17_Chr2g0314731 34.583 480 302 8 2 477 5 476 2.56e-93 292
Msa0537340 MtrunA17_Chr4g0046631 34.845 485 297 9 20 492 36 513 2.24e-92 291
Msa0537340 MtrunA17_Chr2g0314721 35.729 473 281 7 7 467 18 479 4.18e-92 289
Msa0537340 MtrunA17_Chr1g0174451 32.479 468 307 4 4 464 11 476 7.03e-92 289
Msa0537340 MtrunA17_Chr4g0030701 34.553 492 297 9 21 492 27 513 1.24e-91 289
Msa0537340 MtrunA17_Chr1g0200961 35.294 493 309 6 5 492 6 493 2.76e-91 287
Msa0537340 MtrunA17_Chr5g0401691 35.417 480 288 11 1 476 26 487 1.58e-90 285
Msa0537340 MtrunA17_Chr5g0395381 33.263 475 275 7 4 474 14 450 6.94e-90 283
Msa0537340 MtrunA17_Chr1g0174471 33.932 501 307 13 5 492 27 516 1.63e-89 283
Msa0537340 MtrunA17_Chr7g0265611 34.519 478 303 7 25 495 42 516 8.66e-89 281
Msa0537340 MtrunA17_Chr5g0431591 41.066 319 181 3 176 492 1 314 9.76e-88 272
Msa0537340 MtrunA17_Chr7g0246151 34.350 492 300 10 5 482 6 488 1.00e-87 278
Msa0537340 MtrunA17_Chr1g0176831 32.906 468 304 6 4 467 37 498 1.29e-87 278
Msa0537340 MtrunA17_Chr4g0056951 35.464 485 301 7 12 492 28 504 1.57e-87 278
Msa0537340 MtrunA17_Chr7g0258221 33.865 502 318 8 4 497 9 504 2.63e-87 277
Msa0537340 MtrunA17_Chr1g0207841 32.609 460 291 6 50 492 58 515 1.11e-86 276
Msa0537340 MtrunA17_Chr7g0246121 34.956 452 289 5 40 489 45 493 2.15e-86 274
Msa0537340 MtrunA17_Chr4g0039901 33.750 480 299 4 23 494 29 497 2.29e-86 274
Msa0537340 MtrunA17_Chr7g0246131 34.016 488 309 6 5 482 6 490 3.74e-86 274
Msa0537340 MtrunA17_Chr7g0235551 33.970 471 296 8 30 489 34 500 5.07e-86 274
Msa0537340 MtrunA17_Chr8g0355961 33.737 495 314 7 8 492 12 502 9.66e-86 273
Msa0537340 MtrunA17_Chr4g0053621 35.503 507 291 13 4 495 8 493 9.77e-86 273
Msa0537340 MtrunA17_Chr6g0451751 34.843 508 304 12 7 494 20 520 3.37e-85 272
Msa0537340 MtrunA17_Chr1g0213671 34.151 489 308 8 14 492 19 503 1.01e-84 271
Msa0537340 MtrunA17_Chr4g0030711 32.328 464 289 7 50 492 57 516 1.08e-84 271
Msa0537340 MtrunA17_Chr6g0466941 33.984 512 312 12 4 494 8 514 2.35e-84 270
Msa0537340 MtrunA17_Chr5g0430111 38.498 426 245 7 4 419 9 427 3.41e-84 266
Msa0537340 MtrunA17_Chr8g0362481 34.314 408 258 5 65 464 1 406 4.24e-84 266
Msa0537340 MtrunA17_Chr6g0451641 34.661 502 296 16 16 494 21 513 5.96e-84 269
Msa0537340 MtrunA17_Chr6g0451691 34.615 520 295 15 9 494 16 524 9.28e-84 268
Msa0537340 MtrunA17_Chr7g0224551 31.783 516 316 12 1 492 1 504 1.19e-83 268
Msa0537340 MtrunA17_Chr6g0451741 34.034 523 301 13 2 494 34 542 1.48e-83 268
Msa0537340 MtrunA17_Chr2g0304871 35.356 478 291 9 30 494 39 511 3.52e-83 266
Msa0537340 MtrunA17_Chr6g0466901 33.725 510 315 10 4 494 8 513 4.83e-83 266
Msa0537340 MtrunA17_Chr4g0008101 34.902 510 305 12 7 494 16 520 8.27e-83 266
Msa0537340 MtrunA17_Chr7g0224561 31.792 519 312 14 1 492 1 504 1.56e-82 265
Msa0537340 MtrunA17_Chr2g0296651 35.446 505 300 9 1 495 1 489 2.90e-82 263
Msa0537340 MtrunA17_Chr8g0362701 32.747 455 292 8 51 497 56 504 4.32e-82 263
Msa0537340 MtrunA17_Chr7g0258211 35.440 443 266 8 38 467 48 483 7.02e-81 260
Msa0537340 MtrunA17_Chr8g0339311 34.375 480 294 11 26 489 40 514 7.63e-81 261
Msa0537340 MtrunA17_Chr7g0246181 32.252 493 323 7 5 489 6 495 7.70e-81 260
Msa0537340 MtrunA17_Chr6g0451781 35.714 476 284 9 37 494 82 553 2.07e-80 261
Msa0537340 MtrunA17_Chr1g0197881 32.225 481 307 11 1 474 4 472 3.69e-80 258
Msa0537340 MtrunA17_Chr4g0046321 31.893 486 297 12 29 491 34 508 4.39e-80 258
Msa0537340 MtrunA17_Chr1g0197851 32.158 482 307 11 1 474 4 473 1.18e-79 256
Msa0537340 MtrunA17_Chr1g0197871 32.432 481 299 11 5 474 8 473 1.55e-79 256
Msa0537340 MtrunA17_Chr4g0052851 35.583 489 284 14 12 495 19 481 3.28e-79 255
Msa0537340 MtrunA17_Chr6g0458561 34.195 503 305 13 8 492 28 522 5.60e-79 256
Msa0537340 MtrunA17_Chr3g0082701 33.817 482 288 9 37 494 47 521 4.31e-78 253
Msa0537340 MtrunA17_Chr1g0197891 32.008 478 305 11 5 474 8 473 5.87e-78 252
Msa0537340 MtrunA17_Chr4g0039391 31.868 455 288 10 50 494 55 497 5.90e-78 253
Msa0537340 MtrunA17_Chr4g0046331 31.467 518 316 14 5 491 1 510 8.38e-78 253
Msa0537340 MtrunA17_Chr8g0339331 32.495 477 302 8 30 492 39 509 9.65e-78 252
Msa0537340 MtrunA17_Chr6g0451681 32.996 494 265 10 8 494 39 473 1.40e-77 251
Msa0537340 MtrunA17_Chr4g0046351 31.938 454 286 10 29 467 34 479 2.01e-77 251
Msa0537340 MtrunA17_Chr8g0351801 32.143 476 289 9 43 492 47 514 7.53e-77 250
Msa0537340 MtrunA17_Chr4g0052861 31.610 503 315 9 6 495 3 489 4.08e-76 248
Msa0537340 MtrunA17_Chr4g0017411 34.908 487 288 13 13 495 17 478 4.26e-76 247
Msa0537340 MtrunA17_Chr4g0052881 33.951 486 296 9 18 495 22 490 8.20e-75 244
Msa0537340 MtrunA17_Chr1g0200951 32.773 476 299 11 32 497 64 528 1.36e-74 244
Msa0537340 MtrunA17_Chr5g0432751 32.479 468 285 11 30 480 34 487 2.28e-68 227
Msa0537340 MtrunA17_Chr2g0296661 33.624 458 277 10 50 495 52 494 5.82e-68 226
Msa0537340 MtrunA17_Chr5g0419451 32.200 441 277 13 64 497 94 519 2.42e-67 225
Msa0537340 MtrunA17_Chr1g0210091 30.894 492 300 12 3 467 31 509 5.86e-67 224
Msa0537340 MtrunA17_Chr5g0430071 37.752 347 205 4 142 482 2 343 1.23e-65 216
Msa0537340 MtrunA17_Chr8g0346261 32.842 475 285 17 31 491 86 540 2.59e-64 218
Msa0537340 MtrunA17_Chr1g0198191 30.000 480 300 14 5 462 18 483 8.60e-64 216
Msa0537340 MtrunA17_Chr4g0058211 49.029 206 103 1 288 493 10 213 2.52e-63 205
Msa0537340 MtrunA17_Chr3g0101591 47.716 197 103 0 296 492 38 234 6.70e-63 205
Msa0537340 MtrunA17_Chr5g0445371 44.015 259 112 4 236 493 1 227 5.30e-62 202
Msa0537340 MtrunA17_Chr5g0446101 34.062 320 197 5 176 492 1 309 1.04e-61 204
Msa0537340 MtrunA17_Chr8g0377341 31.034 464 299 14 32 489 70 518 2.36e-61 209
Msa0537340 MtrunA17_Chr1g0160861 37.500 296 180 4 198 492 43 334 2.26e-60 201
Msa0537340 MtrunA17_Chr2g0310351 42.857 196 112 0 297 492 1 196 3.50e-56 186
Msa0537340 MtrunA17_Chr6g0463621 47.500 200 100 3 297 492 1 199 1.47e-55 184
Msa0537340 MtrunA17_Chr5g0445351 52.410 166 79 0 324 489 51 216 6.03e-55 183
Msa0537340 MtrunA17_Chr5g0409051 28.310 491 324 14 26 495 26 509 1.82e-54 191
Msa0537340 MtrunA17_Chr5g0423621 48.889 180 90 1 313 492 1 178 5.49e-54 179
Msa0537340 MtrunA17_Chr1g0174431 45.000 200 101 3 297 489 1 198 1.90e-53 179
Msa0537340 MtrunA17_Chr2g0280071 28.963 511 317 13 5 489 39 529 1.95e-53 192
Msa0537340 MtrunA17_Chr5g0445761 54.802 177 80 0 297 473 1 177 2.96e-52 176
Msa0537340 MtrunA17_Chr8g0387101 29.638 442 290 9 61 489 66 499 1.00e-50 180
Msa0537340 MtrunA17_Chr8g0390871 39.234 209 125 2 285 492 15 222 1.21e-50 172
Msa0537340 MtrunA17_Chr2g0314781 50.909 165 79 1 313 477 1 163 4.29e-50 169
Msa0537340 MtrunA17_Chr2g0334021 25.996 477 323 10 31 494 37 496 1.10e-49 177
Msa0537340 MtrunA17_Chr2g0280081 29.978 447 281 14 61 489 565 997 2.13e-49 182
Msa0537340 MtrunA17_Chr2g0280081 29.724 434 258 13 61 467 64 477 7.58e-45 169
Msa0537340 MtrunA17_Chr8g0370641 26.326 509 342 13 11 494 16 516 2.86e-49 177
Msa0537340 MtrunA17_Chr4g0046681 43.939 198 106 2 297 492 31 225 3.45e-49 169
Msa0537340 MtrunA17_Chr5g0413911 28.457 499 298 14 30 489 43 521 5.19e-48 173
Msa0537340 MtrunA17_Chr3g0107611 25.813 461 308 9 30 465 51 502 9.56e-48 173
Msa0537340 MtrunA17_Chr2g0280121 29.759 457 271 16 61 489 68 502 2.43e-47 171
Msa0537340 MtrunA17_Chr5g0445361 57.937 126 53 0 367 492 8 133 5.75e-47 159
Msa0537340 MtrunA17_Chr8g0364651 27.362 508 323 15 5 489 7 491 6.20e-47 170
Msa0537340 MtrunA17_Chr8g0370651 25.581 516 349 13 5 494 14 520 1.69e-46 169
Msa0537340 MtrunA17_Chr4g0074581 27.815 453 300 15 28 462 68 511 1.92e-46 169
Msa0537340 MtrunA17_Chr6g0451811 40.686 204 116 2 293 494 1 201 2.49e-45 157
Msa0537340 MtrunA17_Chr3g0117301 53.846 117 54 0 350 466 3 119 2.62e-45 154
Msa0537340 MtrunA17_Chr6g0463611 35.117 299 177 6 3 294 20 308 1.39e-44 159
Msa0537340 MtrunA17_Chr5g0445751 33.086 269 173 3 30 297 45 307 2.42e-44 158
Msa0537340 MtrunA17_Chr3g0101541 52.273 132 63 0 345 476 1 132 3.88e-44 152
Msa0537340 MtrunA17_Chr6g0451771 38.725 204 120 2 293 494 18 218 2.52e-42 150
Msa0537340 MtrunA17_Chr3g0107541 25.612 449 303 10 38 465 59 497 6.91e-42 157
Msa0537340 MtrunA17_Chr4g0046661 43.678 174 96 1 290 461 18 191 1.50e-41 148
Msa0537340 MtrunA17_Chr2g0280041 28.217 443 294 12 61 489 96 528 1.52e-41 155
Msa0537340 MtrunA17_Chr3g0116731 51.408 142 54 2 350 491 3 129 1.12e-40 142
Msa0537340 MtrunA17_Chr3g0086681 45.513 156 81 1 343 494 11 166 1.97e-40 143
Msa0537340 MtrunA17_Chr5g0402981 39.785 186 106 3 310 492 5 187 2.04e-40 144
Msa0537340 MtrunA17_Chr5g0430041 47.222 144 75 1 323 465 1 144 2.19e-40 143
Msa0537340 MtrunA17_Chr5g0430151 43.478 161 90 1 323 482 1 161 4.74e-39 140
Msa0537340 MtrunA17_Chr4g0046691 32.411 253 162 6 24 273 33 279 1.08e-38 143
Msa0537340 MtrunA17_Chr8g0364631 28.484 488 300 13 30 489 33 499 1.51e-38 147
Msa0537340 MtrunA17_Chr1g0174421 31.313 297 199 5 2 295 20 314 2.93e-38 142
Msa0537340 MtrunA17_Chr4g0076171 43.011 186 79 3 313 492 1 165 5.02e-38 137
Msa0537340 MtrunA17_Chr4g0046701 45.625 160 74 3 339 492 1 153 9.77e-38 136
Msa0537340 MtrunA17_Chr2g0280011 36.275 204 120 4 293 489 4 204 9.49e-37 135
Msa0537340 MtrunA17_Chr4g0046671 31.102 254 163 6 30 273 44 295 8.18e-36 135
Msa0537340 MtrunA17_Chr2g0280061 34.804 204 123 4 293 489 4 204 1.86e-33 125
Msa0537340 MtrunA17_Chr4g0028321 43.697 119 66 1 365 482 25 143 5.92e-32 120
Msa0537340 MtrunA17_Chr5g0402971 28.839 267 168 9 21 273 35 293 1.05e-31 124
Msa0537340 MtrunA17_Chr5g0445411 41.667 156 87 2 4 158 23 175 2.75e-31 119
Msa0537340 MtrunA17_Chr5g0430171 36.232 207 125 4 18 222 24 225 6.90e-30 116
Msa0537340 MtrunA17_Chr5g0444981 44.643 168 90 2 312 477 26 192 7.44e-30 116
Msa0537340 MtrunA17_Chr6g0477081 28.685 251 163 4 159 407 5 241 1.29e-29 116
Msa0537340 MtrunA17_Chr4g0030741 27.174 276 186 5 50 320 84 349 8.82e-29 117
Msa0537340 MtrunA17_Chr2g0310371 41.026 117 68 1 30 146 29 144 1.05e-26 105
Msa0537340 MtrunA17_Chr0c19g0493771 24.292 424 286 15 61 467 218 623 2.67e-26 112
Msa0537340 MtrunA17_Chr6g0451801 28.931 318 189 10 6 302 19 320 3.49e-26 108
Msa0537340 MtrunA17_Chr4g0030761 37.086 151 68 5 349 489 2 135 5.50e-26 103
Msa0537340 MtrunA17_Chr3g0141801 23.729 472 318 13 6 464 15 457 6.53e-26 110
Msa0537340 MtrunA17_Chr5g0396521 23.967 484 290 16 61 489 103 563 1.19e-25 110
Msa0537340 MtrunA17_Chr8g0351391 24.336 452 301 15 37 464 49 483 3.00e-25 108
Msa0537340 MtrunA17_Chr3g0128461 24.113 423 291 13 54 464 93 497 1.76e-24 106
Msa0537340 MtrunA17_Chr3g0117321 44.828 116 63 1 31 146 9 123 2.61e-24 97.8
Msa0537340 MtrunA17_Chr2g0293411 25.393 445 291 17 30 461 42 458 9.78e-24 103
Msa0537340 MtrunA17_Chr8g0351421 24.236 491 324 14 4 467 16 485 1.02e-23 104
Msa0537340 MtrunA17_Chr5g0431631 38.060 134 82 1 7 139 28 161 1.32e-23 97.1
Msa0537340 MtrunA17_Chr4g0044851 25.054 467 290 14 15 464 21 444 1.34e-23 103
Msa0537340 MtrunA17_Chr3g0116721 30.366 191 127 4 137 323 2 190 1.49e-23 98.2
Msa0537340 MtrunA17_Chr8g0351401 24.795 488 321 16 33 493 39 507 1.54e-23 103
Msa0537340 MtrunA17_Chr3g0135841 22.782 496 317 17 9 456 22 499 1.60e-23 103
Msa0537340 MtrunA17_Chr7g0235261 26.014 419 274 13 56 460 83 479 2.89e-23 102
Msa0537340 MtrunA17_Chr4g0063221 25.180 417 295 12 54 464 87 492 3.80e-23 102
Msa0537340 MtrunA17_Chr6g0484771 32.394 142 91 1 65 206 1 137 4.49e-23 95.1
Msa0537340 MtrunA17_Chr1g0207851 26.937 271 178 7 50 307 58 321 5.96e-23 100
Msa0537340 MtrunA17_Chr1g0151221 22.269 476 309 15 31 463 41 498 5.98e-23 102
Msa0537340 MtrunA17_Chr7g0260821 25.546 458 306 20 22 460 29 470 6.02e-23 102
Msa0537340 MtrunA17_Chr8g0351461 23.799 458 315 12 33 467 38 484 1.42e-22 100
Msa0537340 MtrunA17_Chr1g0204271 25.123 406 260 14 89 465 89 479 1.99e-22 100
Msa0537340 MtrunA17_Chr1g0203141 22.705 414 305 11 54 464 87 488 2.51e-22 100
Msa0537340 MtrunA17_Chr3g0105761 29.825 171 115 2 298 465 1 169 4.32e-22 94.4
Msa0537340 MtrunA17_Chr6g0457421 25.059 423 282 16 53 464 82 480 4.76e-22 99.4
Msa0537340 MtrunA17_Chr7g0260831 24.348 460 311 19 21 460 27 469 6.22e-22 99.0
Msa0537340 MtrunA17_Chr4g0004601 23.721 430 270 12 56 460 104 500 7.49e-22 98.6
Msa0537340 MtrunA17_Chr8g0381541 22.052 458 288 14 30 460 44 459 7.61e-22 98.6
Msa0537340 MtrunA17_Chr1g0179811 24.033 491 316 18 26 491 76 534 8.76e-22 98.6
Msa0537340 MtrunA17_Chr8g0381571 22.052 458 288 14 30 460 44 459 9.08e-22 98.2
Msa0537340 MtrunA17_Chr8g0336361 23.110 463 278 13 56 464 93 531 1.15e-21 98.2
Msa0537340 MtrunA17_Chr8g0372711 22.756 479 313 13 4 464 19 458 1.96e-21 97.1
Msa0537340 MtrunA17_Chr3g0107551 28.824 170 118 1 296 462 4 173 2.47e-21 92.4
Msa0537340 MtrunA17_Chr1g0203151 22.118 425 300 13 54 467 83 487 2.78e-20 94.0
Msa0537340 MtrunA17_Chr4g0038271 23.457 405 275 14 88 464 136 533 3.03e-20 94.0
Msa0537340 MtrunA17_Chr8g0351311 24.009 454 301 15 37 464 49 484 7.81e-20 92.4
Msa0537340 MtrunA17_Chr8g0334891 24.336 452 303 15 24 464 33 456 8.61e-20 92.0
Msa0537340 MtrunA17_Chr6g0472221 23.022 417 302 11 54 464 96 499 9.55e-20 92.0
Msa0537340 MtrunA17_Chr6g0479681 21.149 435 308 12 54 467 85 505 1.66e-19 91.7
Msa0537340 MtrunA17_Chr2g0293421 23.767 446 294 15 30 461 46 459 1.74e-19 91.3
Msa0537340 MtrunA17_Chr8g0351441 22.561 492 330 14 4 467 16 484 1.95e-19 91.3
Msa0537340 MtrunA17_Chr2g0313821 26.582 316 211 9 159 464 185 489 3.45e-19 90.5
Msa0537340 MtrunA17_Chr2g0310361 32.836 134 89 1 161 294 5 137 4.21e-19 84.0
Msa0537340 MtrunA17_Chr8g0362731 25.137 366 238 13 114 464 37 381 2.28e-18 87.0
Msa0537340 MtrunA17_Chr7g0262111 23.585 424 279 11 54 461 83 477 2.74e-18 87.8
Msa0537340 MtrunA17_Chr2g0313761 23.419 427 289 15 54 464 80 484 2.79e-18 87.8
Msa0537340 MtrunA17_Chr8g0388921 24.426 479 310 17 2 463 7 450 4.94e-18 86.7
Msa0537340 MtrunA17_Chr5g0397971 22.601 469 318 15 7 463 9 444 6.07e-18 86.3
Msa0537340 MtrunA17_Chr2g0313781 24.921 317 211 9 161 464 199 501 6.30e-18 86.7
Msa0537340 MtrunA17_Chr5g0445341 46.914 81 42 1 67 146 3 83 6.36e-18 78.6
Msa0537340 MtrunA17_Chr4g0044841 22.680 485 308 15 15 479 22 459 9.54e-18 85.9
Msa0537340 MtrunA17_Chr1g0184421 22.947 475 325 19 12 460 12 471 1.36e-17 85.5
Msa0537340 MtrunA17_Chr2g0313771 24.455 413 269 15 70 464 109 496 1.59e-17 85.5
Msa0537340 MtrunA17_Chr2g0307291 22.967 418 292 13 59 464 92 491 1.75e-17 85.1
Msa0537340 MtrunA17_Chr8g0364081 24.036 441 292 17 47 460 86 510 2.55e-17 84.7
Msa0537340 MtrunA17_Chr3g0105751 27.099 262 170 7 30 276 48 303 2.57e-17 84.0
Msa0537340 MtrunA17_Chr2g0288661 22.196 419 302 11 55 464 88 491 2.74e-17 84.7
Msa0537340 MtrunA17_Chr5g0431491 60.784 51 20 0 444 494 1 51 2.78e-17 75.9
Msa0537340 MtrunA17_Chr5g0400421 22.016 486 326 15 26 495 42 490 4.92e-17 83.6
Msa0537340 MtrunA17_Chr4g0076181 42.857 91 52 0 67 157 3 93 9.83e-17 77.8
Msa0537340 MtrunA17_Chr1g0153371 23.374 492 280 17 6 460 8 439 1.21e-16 82.4
Msa0537340 MtrunA17_Chr2g0313751 24.083 436 292 16 46 464 103 516 1.23e-16 82.8
Msa0537340 MtrunA17_Chr2g0314771 23.718 156 119 0 67 222 3 158 1.39e-16 77.4
Msa0537340 MtrunA17_Chr2g0313791 24.522 314 216 9 161 464 182 484 1.40e-16 82.4
Msa0537340 MtrunA17_Chr2g0307301 22.986 422 287 14 59 464 92 491 1.83e-16 82.0
Msa0537340 MtrunA17_Chr8g0387001 23.491 464 306 16 27 457 24 471 3.38e-16 81.3
Msa0537340 MtrunA17_Chr1g0154731 23.077 416 289 13 54 460 81 474 4.28e-16 80.9
Msa0537340 MtrunA17_Chr6g0449341 22.846 499 331 19 1 460 49 532 5.74e-16 80.5
Msa0537340 MtrunA17_Chr8g0372411 22.363 474 314 16 30 489 40 473 7.82e-16 79.7
Msa0537340 MtrunA17_Chr8g0334941 27.615 239 159 6 233 464 70 301 8.38e-16 78.6
Msa0537340 MtrunA17_Chr3g0078411 24.658 219 151 6 250 463 229 438 1.22e-15 79.3
Msa0537340 MtrunA17_Chr2g0313801 24.451 364 239 14 119 464 144 489 1.22e-15 79.3
Msa0537340 MtrunA17_Chr8g0339861 29.327 208 130 7 241 441 240 437 1.26e-15 79.3
Msa0537340 MtrunA17_Chr2g0313831 23.844 411 278 16 69 464 99 489 1.29e-15 79.3
Msa0537340 MtrunA17_Chr5g0443731 22.198 464 303 16 21 464 21 446 1.48e-15 79.0
Msa0537340 MtrunA17_Chr7g0255131 23.156 488 328 17 3 461 8 477 1.58e-15 79.0
Msa0537340 MtrunA17_Chr6g0455461 22.314 484 305 19 1 463 5 438 2.69e-15 78.2
Msa0537340 MtrunA17_Chr2g0280001 28.395 162 113 2 5 163 39 200 3.08e-15 74.7
Msa0537340 MtrunA17_Chr7g0248991 22.190 347 237 13 84 415 23 351 6.76e-15 76.3
Msa0537340 MtrunA17_Chr8g0354511 23.501 417 287 12 61 464 100 497 7.28e-15 77.0
Msa0537340 MtrunA17_Chr6g0449331 22.682 507 320 20 1 460 3 484 8.04e-15 77.0
Msa0537340 MtrunA17_Chr8g0372591 29.032 124 88 0 296 419 2 125 8.14e-15 71.6
Msa0537340 MtrunA17_Chr5g0431601 41.667 84 40 2 67 146 3 81 8.79e-15 69.7
Msa0537340 MtrunA17_Chr3g0107561 24.809 262 176 7 30 276 46 301 1.18e-14 75.1
Msa0537340 MtrunA17_Chr3g0089351 23.765 324 211 9 163 464 60 369 1.84e-14 75.1
Msa0537340 MtrunA17_Chr6g0472171 32.117 137 88 4 348 480 13 148 2.22e-14 70.9
Msa0537340 MtrunA17_Chr8g0348751 23.359 518 344 19 6 494 7 500 2.36e-14 75.5
Msa0537340 MtrunA17_Chr5g0430051 42.391 92 50 2 19 108 26 116 3.29e-14 68.9
Msa0537340 MtrunA17_Chr5g0400411 20.884 498 316 14 26 495 42 489 3.69e-14 74.7
Msa0537340 MtrunA17_Chr3g0089361 27.273 209 138 5 260 464 253 451 3.89e-14 74.7
Msa0537340 MtrunA17_Chr1g0176851 23.013 239 174 4 117 351 2 234 5.44e-14 71.6
Msa0537340 MtrunA17_Chr7g0219961 20.860 465 324 12 6 463 10 437 6.40e-14 73.9
Msa0537340 MtrunA17_Chr8g0372331 31.452 124 79 3 374 494 1 121 9.15e-14 68.2
Msa0537340 MtrunA17_Chr8g0354531 24.065 428 284 14 54 464 215 618 1.27e-13 73.6
Msa0537340 MtrunA17_Chr5g0445541 48.000 75 38 1 25 98 34 108 1.46e-13 67.8
Msa0537340 MtrunA17_Chr8g0341951 21.414 481 312 16 3 462 11 446 1.79e-13 72.4
Msa0537340 MtrunA17_Chr8g0354571 22.857 420 286 14 61 464 100 497 3.52e-13 71.6
Msa0537340 MtrunA17_Chr6g0449381 22.101 276 200 6 207 469 210 483 4.48e-13 71.2
Msa0537340 MtrunA17_Chr2g0280051 26.708 161 115 2 5 162 49 209 1.46e-12 68.6
Msa0537340 MtrunA17_Chr1g0163451 24.723 271 178 9 216 467 237 500 2.35e-12 69.3
Msa0537340 MtrunA17_Chr1g0182861 32.500 120 77 3 348 464 18 136 3.60e-12 64.7
Msa0537340 MtrunA17_Chr2g0286091 28.249 177 121 4 290 463 298 471 3.80e-12 68.6
Msa0537340 MtrunA17_Chr4g0056981 45.070 71 39 0 323 393 1 71 4.48e-12 61.6
Msa0537340 MtrunA17_Chr7g0214931 24.159 327 213 13 100 403 125 439 1.01e-11 67.0
Msa0537340 MtrunA17_Chr6g0451761 24.818 274 162 7 18 275 26 271 3.19e-11 64.3
Msa0537340 MtrunA17_Chr1g0164351 24.579 297 194 11 94 367 128 417 3.50e-11 65.1
Msa0537340 MtrunA17_Chr3g0104351 22.436 468 306 18 32 460 36 485 7.01e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537340 AT4G31500.1 45.325 492 263 4 5 491 3 493 6.31e-157 456
Msa0537340 AT4G13770.1 41.988 493 280 5 5 492 4 495 3.27e-144 423
Msa0537340 AT3G26330.1 45.359 474 252 4 24 494 26 495 7.91e-140 412
Msa0537340 AT3G26310.1 43.662 497 271 5 5 497 6 497 2.10e-139 411
Msa0537340 AT3G26300.1 43.902 492 268 5 5 492 6 493 1.82e-138 409
Msa0537340 AT5G57260.1 43.724 478 260 6 21 492 22 496 3.68e-138 408
Msa0537340 AT3G26320.1 44.283 481 260 5 16 492 17 493 5.16e-138 407
Msa0537340 AT1G13080.1 43.976 498 265 8 4 492 5 497 9.55e-135 399
Msa0537340 AT2G02580.1 44.196 491 267 4 5 492 7 493 1.84e-129 385
Msa0537340 AT5G25140.1 41.429 490 278 5 6 492 6 489 4.16e-129 384
Msa0537340 AT3G26290.1 43.187 477 264 4 19 492 21 493 1.79e-128 383
Msa0537340 AT3G26290.2 43.187 477 264 4 19 492 34 506 2.05e-128 383
Msa0537340 AT3G26180.1 42.254 497 272 10 7 492 5 497 2.29e-128 383
Msa0537340 AT3G26280.1 43.121 487 260 11 16 492 18 497 7.68e-128 382
Msa0537340 AT3G26280.2 43.121 487 260 11 16 492 35 514 8.93e-128 382
Msa0537340 AT1G13110.1 41.649 473 266 7 30 495 33 502 9.03e-128 381
Msa0537340 AT3G26170.1 41.118 501 281 9 2 492 1 497 9.87e-128 381
Msa0537340 AT5G25180.1 41.614 471 266 5 25 492 25 489 8.03e-127 379
Msa0537340 AT1G13090.2 43.982 457 238 8 30 476 29 477 8.74e-126 376
Msa0537340 AT3G48280.1 38.508 496 289 7 1 493 3 485 9.43e-126 376
Msa0537340 AT3G48270.1 39.873 474 273 5 21 493 23 485 9.75e-126 375
Msa0537340 AT3G26210.1 42.826 460 255 7 38 492 40 496 2.24e-125 375
Msa0537340 AT3G26190.1 42.217 469 262 7 30 492 29 494 2.51e-123 370
Msa0537340 AT3G44250.1 44.136 469 252 7 30 492 29 493 3.47e-123 369
Msa0537340 AT5G25120.1 41.042 480 274 6 16 492 16 489 5.20e-123 369
Msa0537340 AT3G26200.1 42.857 469 259 7 30 492 29 494 2.67e-122 367
Msa0537340 AT5G25130.1 41.737 472 268 6 23 492 23 489 3.49e-122 367
Msa0537340 AT3G48310.1 38.689 473 278 5 21 492 24 485 3.44e-121 364
Msa0537340 AT4G13310.1 40.592 473 267 7 26 492 29 493 3.88e-120 362
Msa0537340 AT3G26230.1 42.308 494 275 8 6 492 3 493 5.48e-120 361
Msa0537340 AT3G26150.1 39.521 501 289 9 2 492 1 497 1.66e-119 360
Msa0537340 AT3G48290.1 39.873 474 271 6 19 489 21 483 3.34e-119 359
Msa0537340 AT3G26270.1 40.842 475 270 8 24 492 27 496 1.81e-118 357
Msa0537340 AT4G13290.1 39.832 477 264 8 24 492 25 486 5.30e-118 356
Msa0537340 AT3G48320.1 39.554 493 281 7 4 493 8 486 1.26e-116 352
Msa0537340 AT3G26160.1 40.586 478 271 9 28 496 29 502 8.67e-116 350
Msa0537340 AT3G26830.1 39.794 485 272 9 6 480 3 477 9.17e-116 350
Msa0537340 AT2G24180.1 38.771 472 278 5 24 492 31 494 1.65e-114 347
Msa0537340 AT3G48300.1 39.873 474 267 8 22 492 20 478 2.53e-114 346
Msa0537340 AT3G48300.2 39.873 474 267 8 22 492 22 480 2.69e-114 346
Msa0537340 AT1G13100.1 41.084 443 246 7 39 474 38 472 4.14e-114 346
Msa0537340 AT2G30770.1 38.675 468 277 6 25 489 29 489 3.85e-113 343
Msa0537340 AT3G48290.2 37.800 500 271 7 19 489 21 509 4.00e-113 344
Msa0537340 AT3G53280.1 40.299 469 269 8 30 492 29 492 6.35e-112 340
Msa0537340 AT3G53300.1 39.746 473 276 8 30 496 29 498 1.16e-110 337
Msa0537340 AT5G35715.1 38.073 436 262 6 67 496 3 436 7.07e-108 328
Msa0537340 AT5G24950.1 38.085 470 276 8 28 491 31 491 8.67e-108 330
Msa0537340 AT3G26220.1 41.082 499 283 9 2 492 1 496 5.17e-107 328
Msa0537340 AT1G11610.1 36.887 469 280 6 27 489 31 489 1.45e-105 324
Msa0537340 AT2G30750.1 38.478 473 283 5 19 489 23 489 2.80e-105 323
Msa0537340 AT2G45560.1 36.200 500 295 8 6 489 9 500 2.41e-104 322
Msa0537340 AT1G33720.1 37.500 504 289 11 6 492 9 503 4.55e-104 321
Msa0537340 AT5G04330.1 37.684 475 277 12 30 492 33 500 6.90e-104 320
Msa0537340 AT1G11610.2 37.360 447 264 6 27 467 31 467 1.67e-103 319
Msa0537340 AT2G45550.1 37.526 477 272 8 30 492 39 503 1.14e-101 315
Msa0537340 AT4G12300.1 36.111 468 291 7 7 469 20 484 2.07e-101 314
Msa0537340 AT5G07990.1 35.108 507 301 10 4 494 6 500 5.61e-101 313
Msa0537340 AT4G36220.1 35.865 474 270 9 37 489 48 508 6.88e-100 310
Msa0537340 AT1G13080.2 43.944 355 189 5 145 492 28 379 7.86e-99 303
Msa0537340 AT3G61040.1 37.473 467 282 6 29 492 33 492 7.99e-99 307
Msa0537340 AT5G42590.1 37.000 500 297 9 2 491 1 492 4.92e-98 305
Msa0537340 AT2G40890.1 36.232 483 271 11 30 493 28 492 1.71e-97 303
Msa0537340 AT2G45570.1 38.013 463 268 9 38 489 47 501 1.33e-96 301
Msa0537340 AT5G67310.1 35.758 495 298 10 5 494 18 497 8.52e-95 296
Msa0537340 AT5G44620.1 34.211 456 292 5 38 490 55 505 1.64e-94 296
Msa0537340 AT4G12320.1 32.932 498 320 8 7 497 20 510 1.01e-93 294
Msa0537340 AT5G24960.1 38.429 471 283 5 23 491 27 492 1.96e-93 293
Msa0537340 AT2G45580.1 36.207 464 279 8 39 492 48 504 1.17e-92 291
Msa0537340 AT4G22710.1 33.983 462 297 5 38 497 62 517 9.76e-91 286
Msa0537340 AT1G01280.1 35.169 472 280 9 38 494 41 501 4.15e-90 285
Msa0537340 AT4G22690.1 33.766 462 298 5 38 497 93 548 1.05e-89 285
Msa0537340 AT4G37410.1 36.056 502 290 12 7 495 5 488 4.64e-89 281
Msa0537340 AT3G26180.2 50.385 260 124 3 236 492 106 363 4.77e-88 275
Msa0537340 AT1G74550.1 33.735 498 296 13 7 493 3 477 7.46e-88 278
Msa0537340 AT4G13310.2 39.946 368 208 6 26 388 29 388 2.00e-87 274
Msa0537340 AT4G37400.1 35.619 452 269 9 50 494 51 487 2.15e-87 277
Msa0537340 AT4G37310.1 35.404 483 293 11 24 495 25 499 4.11e-87 277
Msa0537340 AT4G12310.1 34.280 493 311 7 7 492 22 508 4.97e-87 277
Msa0537340 AT4G37430.1 33.202 509 301 12 1 494 6 490 6.68e-87 276
Msa0537340 AT4G37340.1 34.600 500 301 11 5 495 6 488 1.20e-86 275
Msa0537340 AT4G37320.1 35.446 505 290 12 4 495 6 487 3.36e-86 274
Msa0537340 AT3G25180.1 33.400 500 316 10 5 493 10 503 7.19e-86 274
Msa0537340 AT5G06900.1 34.576 483 304 9 4 482 9 483 8.00e-86 273
Msa0537340 AT5G57220.1 35.656 488 289 11 4 485 4 472 1.31e-85 272
Msa0537340 AT4G37360.1 35.516 504 287 15 1 489 1 481 6.96e-85 271
Msa0537340 AT4G31940.1 33.723 513 303 13 2 489 10 510 2.04e-84 270
Msa0537340 AT4G37370.1 34.739 498 288 13 5 489 6 479 3.44e-83 266
Msa0537340 AT4G12330.1 31.659 458 300 6 38 490 55 504 1.13e-81 263
Msa0537340 AT4G31970.1 33.008 512 307 14 2 489 10 509 2.60e-81 262
Msa0537340 AT4G37330.1 35.039 508 285 15 4 495 6 484 4.30e-81 261
Msa0537340 AT1G74540.1 31.663 499 306 12 4 489 3 479 5.39e-81 260
Msa0537340 AT3G52970.1 33.134 501 306 11 5 489 19 506 9.02e-81 260
Msa0537340 AT1G33720.4 38.298 376 218 7 125 492 2 371 1.11e-80 256
Msa0537340 AT1G33720.3 38.298 376 218 7 125 492 2 371 1.11e-80 256
Msa0537340 AT1G33720.5 38.298 376 218 7 125 492 2 371 1.11e-80 256
Msa0537340 AT3G52970.2 32.621 515 304 11 5 489 19 520 1.28e-80 260
Msa0537340 AT2G42250.1 32.136 501 318 7 5 489 9 503 3.96e-80 259
Msa0537340 AT3G20940.1 33.987 459 285 8 18 464 28 480 1.65e-79 257
Msa0537340 AT4G15360.1 33.192 473 306 4 4 472 13 479 2.33e-79 257
Msa0537340 AT5G36220.1 34.442 511 291 13 4 495 8 493 6.39e-79 255
Msa0537340 AT3G20090.2 34.545 440 260 7 40 464 54 480 1.30e-78 255
Msa0537340 AT2G23190.1 33.068 502 306 12 4 495 50 531 3.11e-77 252
Msa0537340 AT2G25160.1 31.445 512 318 12 2 489 3 505 1.07e-76 250
Msa0537340 AT1G33730.1 36.314 369 221 6 132 491 5 368 1.80e-76 244
Msa0537340 AT1G33730.2 36.314 369 221 6 132 491 5 368 1.80e-76 244
Msa0537340 AT3G20950.1 32.983 476 298 9 4 464 14 483 2.31e-76 249
Msa0537340 AT2G14100.1 31.275 502 314 7 3 489 15 500 2.35e-76 249
Msa0537340 AT3G53290.1 38.072 415 228 7 83 492 11 401 4.95e-76 245
Msa0537340 AT3G28740.1 36.222 450 252 13 28 463 38 466 1.73e-75 246
Msa0537340 AT1G33720.2 35.661 401 219 8 125 492 2 396 1.44e-74 241
Msa0537340 AT2G23220.1 33.478 460 271 13 18 463 35 473 2.49e-74 244
Msa0537340 AT5G10600.1 32.335 501 310 12 6 494 21 504 3.19e-74 243
Msa0537340 AT3G20130.1 32.084 427 266 7 51 464 64 479 6.51e-74 243
Msa0537340 AT4G31950.1 33.264 484 280 15 31 489 33 498 3.32e-73 241
Msa0537340 AT5G10610.1 32.866 499 297 13 12 494 12 488 6.19e-72 237
Msa0537340 AT4G15350.1 34.921 441 259 9 40 464 45 473 8.13e-72 237
Msa0537340 AT1G66540.1 34.439 392 230 10 113 495 1 374 5.19e-71 231
Msa0537340 AT4G20240.1 33.838 396 251 6 30 422 34 421 5.65e-71 233
Msa0537340 AT5G06905.1 29.661 472 310 7 10 462 9 477 7.30e-71 234
Msa0537340 AT3G20140.1 32.314 458 289 10 18 464 28 475 7.95e-71 234
Msa0537340 AT5G09970.1 33.937 442 274 12 31 462 71 504 1.12e-70 234
Msa0537340 AT3G32047.1 31.136 440 295 4 43 478 55 490 1.42e-70 233
Msa0537340 AT5G42580.1 31.981 419 265 6 51 464 61 464 3.04e-69 230
Msa0537340 AT3G20110.1 32.653 441 290 4 33 472 43 477 4.73e-69 229
Msa0537340 AT3G20960.2 34.755 469 294 5 4 464 14 478 5.17e-69 230
Msa0537340 AT1G74110.1 33.621 464 279 15 20 462 52 507 5.63e-69 230
Msa0537340 AT2G45580.2 39.935 308 173 5 192 492 48 350 1.02e-68 224
Msa0537340 AT4G15330.1 31.056 483 289 9 4 464 13 473 4.72e-68 227
Msa0537340 AT3G20080.2 32.237 456 295 7 19 464 29 480 6.07e-68 227
Msa0537340 AT3G20080.1 32.237 456 295 7 19 464 29 480 6.07e-68 227
Msa0537340 AT2G46660.1 32.196 469 289 14 31 489 72 521 2.14e-67 226
Msa0537340 AT1G13710.1 31.489 470 292 14 31 489 55 505 2.27e-67 225
Msa0537340 AT5G47990.1 32.563 476 292 7 4 462 14 477 3.14e-67 225
Msa0537340 AT2G27000.1 32.527 455 292 6 19 464 29 477 7.17e-67 224
Msa0537340 AT3G20100.1 31.120 482 298 10 5 464 10 479 1.66e-66 223
Msa0537340 AT3G61880.1 31.535 482 305 13 19 490 57 523 2.98e-66 223
Msa0537340 AT3G61880.2 31.535 482 305 13 19 490 57 523 5.34e-66 223
Msa0537340 AT1G50520.1 30.822 438 271 10 47 462 53 480 3.43e-64 217
Msa0537340 AT3G20130.2 30.357 392 245 7 88 464 73 451 2.18e-63 214
Msa0537340 AT3G20120.4 31.729 457 274 7 36 472 48 486 2.31e-62 212
Msa0537340 AT4G15380.1 29.530 447 290 8 56 492 69 500 6.79e-62 211
Msa0537340 AT2G30490.1 31.788 453 287 10 40 480 44 486 2.09e-61 209
Msa0537340 AT3G20960.1 33.511 376 240 4 95 464 4 375 4.21e-61 206
Msa0537340 AT2G05180.1 32.065 368 248 2 51 418 63 428 8.26e-61 206
Msa0537340 AT1G50560.1 31.075 428 266 10 54 464 68 483 1.61e-60 207
Msa0537340 AT3G20090.1 34.085 355 206 7 125 464 1 342 2.84e-60 203
Msa0537340 AT4G20240.2 33.152 368 234 6 30 395 34 391 1.07e-59 202
Msa0537340 AT1G01190.1 28.281 442 290 10 31 462 75 499 2.75e-59 204
Msa0537340 AT1G01190.2 28.281 442 290 10 31 462 80 504 2.98e-59 204
Msa0537340 AT5G24960.2 36.240 367 228 4 23 388 27 388 2.05e-58 198
Msa0537340 AT1G28430.1 30.398 477 303 9 4 464 14 477 2.67e-58 201
Msa0537340 AT1G66540.2 34.835 333 193 9 169 495 1 315 3.80e-58 196
Msa0537340 AT3G10560.1 30.652 460 287 13 20 462 36 480 6.85e-57 197
Msa0537340 AT1G11600.1 28.200 461 297 13 24 462 30 478 1.52e-56 196
Msa0537340 AT1G64940.1 28.705 533 318 16 2 497 1 508 3.90e-56 195
Msa0537340 AT2G27010.1 31.866 477 295 9 19 489 25 477 8.50e-56 194
Msa0537340 AT2G22330.1 27.708 480 326 8 4 464 27 504 1.94e-55 194
Msa0537340 AT2G22330.2 27.708 480 326 8 4 464 50 527 3.02e-55 194
Msa0537340 AT4G39950.1 27.200 500 324 11 2 473 24 511 3.26e-55 194
Msa0537340 AT4G15330.2 28.571 483 273 10 4 464 13 445 3.93e-55 192
Msa0537340 AT5G05260.2 27.745 501 333 10 3 476 6 504 8.06e-55 192
Msa0537340 AT4G39950.2 27.108 498 323 11 4 473 66 551 8.47e-55 193
Msa0537340 AT1G58260.1 27.273 495 315 14 5 467 12 493 1.07e-54 192
Msa0537340 AT5G04630.1 28.370 497 284 15 4 462 14 476 1.04e-53 189
Msa0537340 AT3G61040.2 32.249 369 240 6 29 394 33 394 1.89e-52 182
Msa0537340 AT5G25900.1 27.510 498 319 14 16 492 27 503 2.77e-52 185
Msa0537340 AT1G64950.1 28.800 500 299 14 30 497 33 507 2.85e-52 185
Msa0537340 AT3G25180.2 31.362 389 253 9 5 382 10 395 2.27e-51 180
Msa0537340 AT3G20080.4 31.412 347 227 6 125 464 1 343 9.09e-51 178
Msa0537340 AT3G20080.5 31.412 347 227 6 125 464 1 343 9.09e-51 178
Msa0537340 AT3G20080.6 31.412 347 227 6 125 464 1 343 9.09e-51 178
Msa0537340 AT3G20080.3 31.412 347 227 6 125 464 1 343 9.09e-51 178
Msa0537340 AT2G12190.1 29.025 472 280 13 30 467 33 483 9.57e-51 181
Msa0537340 AT3G20120.2 30.435 368 218 7 125 472 1 350 5.82e-50 176
Msa0537340 AT3G20120.3 30.435 368 218 7 125 472 1 350 5.82e-50 176
Msa0537340 AT3G20120.1 30.435 368 218 7 125 472 1 350 5.82e-50 176
Msa0537340 AT1G64930.1 28.486 502 299 17 30 497 33 508 9.48e-50 178
Msa0537340 AT1G13090.1 37.455 275 155 7 30 295 29 295 1.53e-49 172
Msa0537340 AT5G05260.1 26.800 500 307 10 3 476 6 472 3.57e-49 176
Msa0537340 AT5G36220.2 34.211 342 190 8 165 495 30 347 4.23e-48 170
Msa0537340 AT1G16410.1 26.627 507 335 14 4 478 14 515 6.79e-48 174
Msa0537340 AT3G03470.1 27.778 522 316 17 4 489 6 502 8.84e-48 173
Msa0537340 AT1G79370.1 27.079 469 307 13 30 467 41 505 7.14e-47 171
Msa0537340 AT3G20935.1 34.194 310 166 8 186 464 3 305 8.65e-47 166
Msa0537340 AT5G04660.1 28.319 452 293 12 59 494 73 509 2.16e-46 169
Msa0537340 AT2G45580.3 31.111 360 231 8 39 388 48 400 2.40e-46 166
Msa0537340 AT1G16400.1 26.216 473 322 10 30 478 45 514 3.70e-46 169
Msa0537340 AT2G25160.2 28.643 398 258 9 2 379 3 394 1.90e-43 159
Msa0537340 AT5G61320.1 29.801 453 263 11 62 493 66 484 6.18e-43 159
Msa0537340 AT3G10570.1 26.531 441 290 14 41 462 55 480 1.53e-41 155
Msa0537340 AT1G64900.1 28.151 476 318 14 36 497 38 503 8.97e-39 148
Msa0537340 AT5G35917.1 24.792 480 295 11 18 476 31 465 1.75e-36 141
Msa0537340 AT3G53305.1 50.758 132 60 1 343 474 183 309 1.51e-33 130
Msa0537340 AT3G53305.1 31.548 168 112 3 67 231 3 170 7.87e-18 85.1
Msa0537340 AT1G16410.2 26.355 406 270 12 4 385 14 414 5.59e-32 127
Msa0537340 AT1G19630.1 25.470 479 311 17 1 464 1 448 5.47e-29 119
Msa0537340 AT1G19630.3 25.474 475 308 17 1 460 1 444 1.08e-27 115
Msa0537340 AT2G26170.1 24.468 470 317 15 16 460 32 488 1.62e-26 113
Msa0537340 AT4G20235.1 28.626 262 151 7 5 256 1 236 1.68e-26 110
Msa0537340 AT4G20235.1 44.211 95 50 2 372 464 237 330 1.91e-19 90.1
Msa0537340 AT3G19270.2 25.813 492 303 19 4 479 8 453 4.97e-25 108
Msa0537340 AT2G45510.1 25.207 484 319 14 6 464 15 480 5.19e-25 108
Msa0537340 AT2G45560.2 26.804 291 192 7 6 280 9 294 4.05e-24 103
Msa0537340 AT3G53130.1 25.361 485 306 22 35 491 78 534 1.18e-23 104
Msa0537340 AT2G44890.1 25.688 436 284 17 88 497 87 508 1.35e-23 104
Msa0537340 AT1G19630.2 25.814 430 278 16 1 415 1 404 2.99e-23 102
Msa0537340 AT3G14640.2 25.708 424 277 14 56 464 109 509 1.84e-22 100
Msa0537340 AT3G14640.1 25.236 424 279 13 56 464 87 487 2.11e-22 100
Msa0537340 AT2G45560.3 27.660 235 152 6 6 227 9 238 3.39e-22 95.9
Msa0537340 AT4G15110.1 23.935 493 297 19 61 497 110 580 3.75e-22 100
Msa0537340 AT1G31800.1 24.385 447 301 15 61 491 139 564 1.25e-21 98.6
Msa0537340 AT2G26710.1 24.324 444 292 15 36 464 74 488 2.21e-21 97.8
Msa0537340 AT4G27710.1 25.176 425 285 13 53 464 86 490 2.49e-21 97.4
Msa0537340 AT5G24910.1 22.917 432 304 12 48 464 88 505 3.52e-21 97.1
Msa0537340 AT4G19230.1 22.921 445 288 14 30 464 37 436 8.53e-21 95.5
Msa0537340 AT1G63710.1 26.016 492 312 17 32 494 29 497 1.19e-20 95.5
Msa0537340 AT3G14610.1 23.501 417 284 11 61 464 91 485 1.66e-20 94.7
Msa0537340 AT2G44890.2 24.885 434 272 17 88 497 87 490 2.82e-20 94.0
Msa0537340 AT2G29090.2 22.926 458 301 15 19 464 39 456 3.26e-20 94.0
Msa0537340 AT2G29090.1 22.926 458 301 15 19 464 39 456 3.26e-20 94.0
Msa0537340 AT5G38450.1 24.520 469 293 16 32 464 46 489 4.88e-20 93.6
Msa0537340 AT1G24540.1 22.043 372 270 9 114 467 127 496 1.37e-19 92.0
Msa0537340 AT5G24900.1 22.172 442 294 13 48 464 84 500 1.83e-19 91.7
Msa0537340 AT4G19230.2 22.902 441 285 14 30 460 37 432 2.82e-19 90.9
Msa0537340 AT5G45340.1 23.126 467 304 12 8 464 15 436 2.85e-19 90.9
Msa0537340 AT5G52400.1 22.066 426 309 12 42 461 81 489 3.25e-19 90.9
Msa0537340 AT1G05160.2 22.870 446 304 13 30 463 46 463 3.83e-19 90.5
Msa0537340 AT1G05160.1 22.870 446 304 13 30 463 46 463 3.83e-19 90.5
Msa0537340 AT3G14690.2 23.923 418 290 13 56 464 122 520 4.41e-19 90.9
Msa0537340 AT3G14690.1 23.923 418 290 13 56 464 87 485 5.89e-19 90.1
Msa0537340 AT5G48000.2 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT5G48000.4 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT5G48000.7 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT5G48000.6 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT5G48000.5 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT5G48000.3 22.912 467 289 13 24 464 30 451 7.85e-19 89.7
Msa0537340 AT1G67110.1 25.219 456 299 15 32 464 47 483 9.31e-19 89.7
Msa0537340 AT5G48000.1 22.814 469 291 13 24 466 71 494 9.86e-19 89.4
Msa0537340 AT1G13150.1 23.467 375 260 12 112 464 121 490 1.02e-18 89.4
Msa0537340 AT1G75130.1 21.759 432 282 15 53 464 81 476 1.24e-18 89.0
Msa0537340 AT3G26125.1 21.945 401 267 11 114 482 130 516 1.53e-18 89.0
Msa0537340 AT1G13140.1 24.074 378 250 14 114 464 130 497 1.91e-18 88.6
Msa0537340 AT3G14650.1 23.040 421 290 12 56 464 87 485 4.60e-18 87.4
Msa0537340 AT1G11680.1 22.316 475 333 15 1 464 9 458 5.81e-18 87.0
Msa0537340 AT3G14630.1 24.221 417 280 14 61 464 88 481 7.03e-18 86.7
Msa0537340 AT5G45340.2 23.441 465 297 13 8 460 15 432 7.50e-18 86.3
Msa0537340 AT5G38970.1 20.998 481 307 14 5 463 10 439 9.11e-18 86.3
Msa0537340 AT3G14630.2 24.221 417 280 14 61 464 143 536 1.05e-17 86.7
Msa0537340 AT3G30180.1 22.269 476 315 15 1 463 6 439 1.32e-17 85.9
Msa0537340 AT3G14620.1 23.571 420 290 10 55 464 90 488 1.76e-17 85.5
Msa0537340 AT1G65340.1 25.000 252 177 6 231 473 237 485 1.90e-17 85.5
Msa0537340 AT2G26170.2 26.230 244 172 6 221 460 166 405 2.56e-17 84.7
Msa0537340 AT1G78490.1 22.545 448 302 14 30 464 36 451 3.50e-17 84.3
Msa0537340 AT1G13140.2 23.577 369 237 13 114 464 130 471 8.29e-17 83.6
Msa0537340 AT3G48520.1 21.996 491 331 17 1 461 1 469 1.58e-16 82.8
Msa0537340 AT5G63450.1 22.177 487 334 20 1 460 3 471 2.30e-16 82.0
Msa0537340 AT5G63450.2 22.177 487 334 20 1 460 61 529 2.64e-16 82.0
Msa0537340 AT1G01600.1 25.000 504 308 25 32 494 29 503 4.20e-16 81.6
Msa0537340 AT5G05690.3 30.000 180 117 4 288 462 147 322 5.37e-16 79.7
Msa0537340 AT4G36380.1 24.255 470 266 21 30 462 70 486 7.03e-16 80.5
Msa0537340 AT5G05690.1 30.000 180 117 4 288 462 266 441 7.61e-16 80.5
Msa0537340 AT5G38970.2 24.889 225 151 5 244 463 147 358 3.11e-15 77.8
Msa0537340 AT5G38970.4 24.889 225 151 5 244 463 147 358 3.11e-15 77.8
Msa0537340 AT4G39510.1 26.804 194 134 5 299 489 310 498 3.39e-15 78.6
Msa0537340 AT2G45970.1 24.078 461 302 18 32 457 29 476 3.64e-15 78.6
Msa0537340 AT5G35920.1 32.800 125 82 1 354 476 6 130 6.93e-15 72.8
Msa0537340 AT2G46950.1 24.350 423 283 15 51 460 141 539 1.23e-14 77.0
Msa0537340 AT4G20235.2 39.326 89 53 1 168 256 15 102 1.26e-14 71.6
Msa0537340 AT1G73340.1 21.896 443 303 12 30 462 44 453 4.92e-14 74.7
Msa0537340 AT5G52320.2 24.400 250 168 7 231 467 237 478 7.67e-14 74.3
Msa0537340 AT5G52320.1 24.400 250 168 7 231 467 237 478 7.98e-14 74.3
Msa0537340 AT1G57750.1 24.607 191 136 4 290 478 299 483 8.09e-14 73.9
Msa0537340 AT2G23180.1 23.786 206 146 4 290 489 305 505 1.75e-13 73.2
Msa0537340 AT1G78490.2 22.807 399 265 13 30 415 36 404 3.14e-13 72.0
Msa0537340 AT5G02900.1 25.269 186 134 4 290 470 272 457 8.44e-13 70.9
Msa0537340 AT2G34490.1 28.492 179 122 4 288 463 288 463 1.17e-12 70.5
Msa0537340 AT4G39500.1 23.837 172 129 2 298 467 271 442 1.33e-12 70.1
Msa0537340 AT4G39500.2 23.837 172 129 2 298 467 321 492 2.06e-12 69.7
Msa0537340 AT5G36110.1 29.480 173 114 3 294 463 281 448 2.91e-12 69.3
Msa0537340 AT2G29090.3 21.945 401 261 15 76 464 1 361 4.17e-12 68.2
Msa0537340 AT5G36130.1 34.409 93 57 1 371 463 23 111 9.79e-12 63.2
Msa0537340 AT5G58860.1 22.177 487 322 18 9 460 13 477 2.85e-11 66.2
Msa0537340 AT2G34500.1 25.843 178 128 2 288 463 283 458 3.34e-11 65.9

Find 98 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTCTGCAATGTTTATT+AGG 0.151830 4_1:+15614894 Msa0537340:three_prime_UTR
TGTAGAAGATTCCCTATTAT+TGG 0.174765 4_1:-15611621 None:intergenic
GAAAGGAGAAATAAGAAATT+TGG 0.185824 4_1:+15614319 Msa0537340:CDS
ATCGAAAATTGTACTATAAA+TGG 0.194416 4_1:+15614461 Msa0537340:CDS
CTCTCGGGATAAAATTCTTC+TGG 0.195705 4_1:-15614560 None:intergenic
CCTAAAGGCCTTCCAATAAT+AGG 0.212398 4_1:+15611609 Msa0537340:CDS
ATAATATGTCGGACTGCTTT+TGG 0.214109 4_1:+15612050 Msa0537340:CDS
TTCAGAGAGATCCAGATATT+TGG 0.226215 4_1:+15614531 Msa0537340:CDS
CCTATTATTGGAAGGCCTTT+AGG 0.245975 4_1:-15611609 None:intergenic
TTAACTACAGCCTTCAAATA+AGG 0.261505 4_1:-15614386 None:intergenic
TCTGGGTTTATCCAAATATC+TGG 0.264752 4_1:-15614542 None:intergenic
CAAAACATATTGTCTTATAA+TGG 0.279846 4_1:+15611819 Msa0537340:CDS
CATTCACGGGTTGGATTGAT+AGG 0.283253 4_1:+15612174 Msa0537340:CDS
TTACTCTGCAATGTTTATTA+GGG 0.284141 4_1:+15614895 Msa0537340:three_prime_UTR
ACATATAATATTGTCTTTGC+TGG 0.299254 4_1:-15614494 None:intergenic
ATCTTCTCTATTCGTTTGAT+TGG 0.301890 4_1:+15614705 Msa0537340:CDS
TCTCAATTCTCAAAGATATA+TGG 0.308164 4_1:+15611675 Msa0537340:CDS
ATTGAGAAAAGTAGGTTTCA+TGG 0.318678 4_1:+15612095 Msa0537340:CDS
AACCAACATAGTTAATATAA+AGG 0.322908 4_1:-15614843 None:intergenic
TAGGATTCTCTTCCTTTCAT+AGG 0.341571 4_1:+15611469 Msa0537340:five_prime_UTR
AGAGATTATTGATGAACATT+TGG 0.343337 4_1:+15612256 Msa0537340:CDS
TCAAAATTGTCCTTATTTGA+AGG 0.346216 4_1:+15614376 Msa0537340:CDS
AAAGGAGAAATAAGAAATTT+GGG 0.350078 4_1:+15614320 Msa0537340:CDS
TCAGTAATTTGCTCTCTATT+CGG 0.353109 4_1:-15612281 None:intergenic
TTCACTTTACTCATTACTCT+TGG 0.357563 4_1:-15614299 None:intergenic
CCACATCAGCAGCATCAGTT+TGG 0.363310 4_1:+15614252 Msa0537340:CDS
ACCTATGGCAGTTGCCTCAT+TGG 0.375465 4_1:+15614667 Msa0537340:CDS
TCTCGGGATAAAATTCTTCT+GGG 0.390314 4_1:-15614559 None:intergenic
CTAAAGGCCTTCCAATAATA+GGG 0.398519 4_1:+15611610 Msa0537340:CDS
TCTAATAGACCTATATCATA+TGG 0.403298 4_1:+15611795 Msa0537340:CDS
AAAACATATTGTCTTATAAT+GGG 0.403774 4_1:+15611820 Msa0537340:CDS
TGCTGATTATATTCCATTCA+CGG 0.407571 4_1:+15612160 Msa0537340:CDS
ATAAAGGGATGTATCTACTT+AGG 0.408425 4_1:-15614827 None:intergenic
CAATATTATATGTAAATGCT+TGG 0.422937 4_1:+15614504 Msa0537340:CDS
CACATCAGCAGCATCAGTTT+GGG 0.423668 4_1:+15614253 Msa0537340:CDS
ACCAACATAGTTAATATAAA+GGG 0.428466 4_1:-15614842 None:intergenic
CCGTCTTGATAGAAATTTCA+AGG 0.428768 4_1:+15612214 Msa0537340:CDS
TTCTTCTATAAGAATATTTG+AGG 0.430008 4_1:+15611938 Msa0537340:CDS
ATTATATTCCATTCACGGGT+TGG 0.433388 4_1:+15612165 Msa0537340:CDS
ATGATGGAATTGAGAAAAGT+AGG 0.434718 4_1:+15612087 Msa0537340:CDS
GACTTCGAACTAATACCGTT+TGG 0.443170 4_1:+15614617 Msa0537340:CDS
GGGAAAAGCTATGAAGATGA+TGG 0.444267 4_1:+15612071 Msa0537340:CDS
TCCCTTTATATTAACTATGT+TGG 0.448332 4_1:+15614841 Msa0537340:three_prime_UTR
TTCTTGTGCTGAGTGATCCC+TGG 0.449195 4_1:-15614776 None:intergenic
ATTGATACATCAATGCTTCC+AGG 0.451374 4_1:+15614758 Msa0537340:CDS
TAAAGGGATGTATCTACTTA+GGG 0.477449 4_1:-15614826 None:intergenic
AATAATCCACCTGGTCCTAA+AGG 0.489084 4_1:+15611594 Msa0537340:CDS
GCTGATTATATTCCATTCAC+GGG 0.489810 4_1:+15612161 Msa0537340:CDS
CTTGGCACAAGTAGTGGGGC+TGG 0.492185 4_1:-15614431 None:intergenic
TCCTCTTTGTCTTATTGCCA+AGG 0.492195 4_1:+15614802 Msa0537340:CDS
AATATTATATGTAAATGCTT+GGG 0.494909 4_1:+15614505 Msa0537340:CDS
GAACTAATACCGTTTGGAGC+TGG 0.495954 4_1:+15614623 Msa0537340:CDS
AGAATAGTATGATACACGTT+TGG 0.496908 4_1:-15611919 None:intergenic
GGCAACTGCCATAGGTATAC+CGG 0.497884 4_1:-15614660 None:intergenic
TATAAATATGAATGAAGAGT+AGG 0.502042 4_1:+15611450 Msa0537340:five_prime_UTR
TTGGAAATTACCACATGGGT+TGG 0.515330 4_1:+15614724 Msa0537340:CDS
ATTGGAAGGCCTTTAGGACC+AGG 0.515708 4_1:-15611603 None:intergenic
ATTACCACATGGGTTGGTAA+AGG 0.517405 4_1:+15614730 Msa0537340:CDS
GCACAAGTAGTGGGGCTGGT+AGG 0.519799 4_1:-15614427 None:intergenic
ATCAACTTTGATCACATCAA+AGG 0.524232 4_1:+15612365 Msa0537340:CDS
CTATCAATCCAACCCGTGAA+TGG 0.526448 4_1:-15612173 None:intergenic
TCAACTTTGATCACATCAAA+GGG 0.534343 4_1:+15612366 Msa0537340:CDS
ACTTCAACTTGGTTTAAGAC+CGG 0.537882 4_1:+15611710 Msa0537340:CDS
GATTCCCTTGGCACAAGTAG+TGG 0.540797 4_1:-15614437 None:intergenic
ATTCCCTTGGCACAAGTAGT+GGG 0.542954 4_1:-15614436 None:intergenic
AGAACAAGTAAAAGTAGTAT+CGG 0.550126 4_1:-15611519 None:intergenic
CCTTGAAATTTCTATCAAGA+CGG 0.552570 4_1:-15612214 None:intergenic
AGAGCAAATTACTGATGAAG+AGG 0.561913 4_1:+15612289 Msa0537340:CDS
GCTGAAGAAACAACAATAGC+CGG 0.564239 4_1:-15611729 None:intergenic
GAAGATTCCCTATTATTGGA+AGG 0.567448 4_1:-15611617 None:intergenic
AATTTGCCCCGGTATACCTA+TGG 0.567620 4_1:+15614652 Msa0537340:CDS
AGAGTAATGAGTAAAGTGAA+AGG 0.578392 4_1:+15614302 Msa0537340:CDS
CAGCCCCACTACTTGTGCCA+AGG 0.578860 4_1:+15614432 Msa0537340:CDS
CCAAACTGATGCTGCTGATG+TGG 0.579162 4_1:-15614252 None:intergenic
TCCAATGAGGCAACTGCCAT+AGG 0.582155 4_1:-15614668 None:intergenic
GCAACTGCCATAGGTATACC+GGG 0.584265 4_1:-15614659 None:intergenic
AGCCCCACTACTTGTGCCAA+GGG 0.589408 4_1:+15614433 Msa0537340:CDS
TAATGTCACTCACCTATGAA+AGG 0.590566 4_1:-15611481 None:intergenic
ATTCTACGACCAGCTCCAAA+CGG 0.592061 4_1:-15614632 None:intergenic
GGATATGCTTGTAGCTGCAA+CGG 0.600355 4_1:+15614226 Msa0537340:intron
TGCAAGGATAAGTTCCAATG+AGG 0.607745 4_1:-15614681 None:intergenic
ATGTATCTACTTAGGGACCT+TGG 0.613138 4_1:-15614819 None:intergenic
TCTCAAGTACTATAATATGT+CGG 0.616520 4_1:+15612039 Msa0537340:CDS
TTGATTGGAAATTACCACAT+GGG 0.617977 4_1:+15614720 Msa0537340:CDS
TTCCCTTGGCACAAGTAGTG+GGG 0.636396 4_1:-15614435 None:intergenic
TTGATACATCAATGCTTCCA+GGG 0.636673 4_1:+15614759 Msa0537340:CDS
ACGAATAGAGAAGATTTGCA+AGG 0.646616 4_1:-15614697 None:intergenic
TTGTGGAAGAACATAAGCAA+AGG 0.648394 4_1:-15611555 None:intergenic
ACCTTGGCAATAAGACAAAG+AGG 0.649284 4_1:-15614803 None:intergenic
GCTGGTCGTAGAATTTGCCC+CGG 0.653781 4_1:+15614641 Msa0537340:CDS
GGAAGGCCTTTAGGACCAGG+TGG 0.666406 4_1:-15611600 None:intergenic
ACAAATACAAATAATCCACC+TGG 0.672454 4_1:+15611585 Msa0537340:CDS
TTTGATTGGAAATTACCACA+TGG 0.676765 4_1:+15614719 Msa0537340:CDS
CCAAGTTGAAGTGAAAACAA+AGG 0.679336 4_1:-15611699 None:intergenic
GGTTGGATTGATAGGCTCAG+AGG 0.693584 4_1:+15612182 Msa0537340:CDS
TCTTCCTTTACCAACCCATG+TGG 0.699620 4_1:-15614734 None:intergenic
TCACATCAAAGGGATCCTCA+CGG 0.709186 4_1:+15612376 Msa0537340:CDS
CAACTGCCATAGGTATACCG+GGG 0.770007 4_1:-15614658 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTCTTTTAAATTTAATAATT+TGG + chr4_1:15612598-15612617 Msa0537340:intron 10.0%
!!! GAAATATTTTTTTAATAATG+AGG + chr4_1:15612679-15612698 Msa0537340:intron 10.0%
!!! AAAAATTATTGAATATTTTG+AGG + chr4_1:15612715-15612734 Msa0537340:intron 10.0%
!!! TATTTTAAAACAAAATTATG+AGG + chr4_1:15613707-15613726 Msa0537340:intron 10.0%
!! AAAAAAATAGAAAAATAAGT+TGG + chr4_1:15613755-15613774 Msa0537340:intron 10.0%
!! AAAAAATAGAAAAATAAGTT+GGG + chr4_1:15613756-15613775 Msa0537340:intron 10.0%
!! AAAACATATTGTCTTATAAT+GGG + chr4_1:15611820-15611839 Msa0537340:CDS 15.0%
!! TGTATAATATATACTAAAAG+AGG - chr4_1:15612456-15612475 None:intergenic 15.0%
!!! CTTTTAGTATATATTATACA+TGG + chr4_1:15612456-15612475 Msa0537340:intron 15.0%
!! AACATCAAATAAAATTTATC+CGG - chr4_1:15612820-15612839 None:intergenic 15.0%
!! AATTATGTTGAAATAATGTA+TGG - chr4_1:15612912-15612931 None:intergenic 15.0%
!! AAAAACCCATAAAAATAAAT+GGG + chr4_1:15613356-15613375 Msa0537340:intron 15.0%
!!! GTTTTGATTTTCAATATATA+GGG - chr4_1:15613499-15613518 None:intergenic 15.0%
!!! TGTTTTGATTTTCAATATAT+AGG - chr4_1:15613500-15613519 None:intergenic 15.0%
!!! TGGATTTTTTTTTTTTTTGA+GGG - chr4_1:15613996-15614015 None:intergenic 15.0%
!!! ATGGATTTTTTTTTTTTTTG+AGG - chr4_1:15613997-15614016 None:intergenic 15.0%
!! AATATTATATGTAAATGCTT+GGG + chr4_1:15614505-15614524 Msa0537340:CDS 15.0%
!!! GAAAGTTCTATAAATTTTAT+TGG + chr4_1:15614590-15614609 Msa0537340:CDS 15.0%
!! TATAAATATGAATGAAGAGT+AGG + chr4_1:15611450-15611469 Msa0537340:five_prime_UTR 20.0%
!!! TTGTATTTGTTTTATGTTTG+TGG - chr4_1:15611575-15611594 None:intergenic 20.0%
!!! ATTGTTTTTGAATACTTCTT+TGG - chr4_1:15611763-15611782 None:intergenic 20.0%
!! CAAAACATATTGTCTTATAA+TGG + chr4_1:15611819-15611838 Msa0537340:CDS 20.0%
!! TTCTTCTATAAGAATATTTG+AGG + chr4_1:15611938-15611957 Msa0537340:CDS 20.0%
!! TAAAGATTCATCAAAAAGTT+TGG + chr4_1:15612515-15612534 Msa0537340:intron 20.0%
!! AAAGATTCATCAAAAAGTTT+GGG + chr4_1:15612516-15612535 Msa0537340:intron 20.0%
!! AATTTGGAGAAATTCTAATA+TGG + chr4_1:15612614-15612633 Msa0537340:intron 20.0%
!! GAAAAAAAGACAAATATAGA+TGG - chr4_1:15612995-15613014 None:intergenic 20.0%
!!! GTAAACACTTTAAAACAAAA+AGG - chr4_1:15613017-15613036 None:intergenic 20.0%
!! AGAGATAGATAGTTATAAAA+GGG + chr4_1:15613131-15613150 Msa0537340:intron 20.0%
!!! TTTTTTTTGGTTTTTTAGGT+GGG - chr4_1:15613293-15613312 None:intergenic 20.0%
!!! ATTTTTTTTGGTTTTTTAGG+TGG - chr4_1:15613294-15613313 None:intergenic 20.0%
!! ACCTAAAAAACCAAAAAAAA+TGG + chr4_1:15613293-15613312 Msa0537340:intron 20.0%
!! CCTAAAAAACCAAAAAAAAT+GGG + chr4_1:15613294-15613313 Msa0537340:intron 20.0%
!! GAAAAACCCATAAAAATAAA+TGG + chr4_1:15613355-15613374 Msa0537340:intron 20.0%
!!! TGAAACCCATTTATTTTTAT+GGG - chr4_1:15613364-15613383 None:intergenic 20.0%
!!! AATTAATATGTTGCACTTTT+TGG + chr4_1:15613533-15613552 Msa0537340:intron 20.0%
!!! TTGTTCTATCTTTTATTGTA+TGG - chr4_1:15614016-15614035 None:intergenic 20.0%
!! AAAGGAGAAATAAGAAATTT+GGG + chr4_1:15614320-15614339 Msa0537340:CDS 20.0%
!! ATCGAAAATTGTACTATAAA+TGG + chr4_1:15614461-15614480 Msa0537340:CDS 20.0%
!! CAATATTATATGTAAATGCT+TGG + chr4_1:15614504-15614523 Msa0537340:CDS 20.0%
!! ACCAACATAGTTAATATAAA+GGG - chr4_1:15614845-15614864 None:intergenic 20.0%
!! AACCAACATAGTTAATATAA+AGG - chr4_1:15614846-15614865 None:intergenic 20.0%
! AGAACAAGTAAAAGTAGTAT+CGG - chr4_1:15611522-15611541 None:intergenic 25.0%
! TCTCAATTCTCAAAGATATA+TGG + chr4_1:15611675-15611694 Msa0537340:CDS 25.0%
! TCTAATAGACCTATATCATA+TGG + chr4_1:15611795-15611814 Msa0537340:CDS 25.0%
!!! ATGTTTTGACCATATGATAT+AGG - chr4_1:15611807-15611826 None:intergenic 25.0%
! TCTCAAGTACTATAATATGT+CGG + chr4_1:15612039-15612058 Msa0537340:CDS 25.0%
! AGAGATTATTGATGAACATT+TGG + chr4_1:15612256-15612275 Msa0537340:CDS 25.0%
! TATTAAATTATCATACCGTG+AGG - chr4_1:15612394-15612413 None:intergenic 25.0%
!! GTGTCTAAACATTATTGATT+TGG + chr4_1:15612755-15612774 Msa0537340:intron 25.0%
! GAGAGATAGATAGTTATAAA+AGG + chr4_1:15613130-15613149 Msa0537340:intron 25.0%
! GAGATAGATAGTTATAAAAG+GGG + chr4_1:15613132-15613151 Msa0537340:intron 25.0%
!! AGGATATAATTTGTATCACA+TGG + chr4_1:15613172-15613191 Msa0537340:intron 25.0%
!!! CCCATTTTTTTTGGTTTTTT+AGG - chr4_1:15613297-15613316 None:intergenic 25.0%
! AAAAACCAAAAAAAATGGGT+TGG + chr4_1:15613298-15613317 Msa0537340:intron 25.0%
!! AAAACCAAAAAAAATGGGTT+GGG + chr4_1:15613299-15613318 Msa0537340:intron 25.0%
!!! CTGAAACCCATTTATTTTTA+TGG - chr4_1:15613365-15613384 None:intergenic 25.0%
!! CATAAAAATAAATGGGTTTC+AGG + chr4_1:15613363-15613382 Msa0537340:intron 25.0%
! ATTAACATTATTGGGTAAGT+GGG - chr4_1:15613414-15613433 None:intergenic 25.0%
! TATTAACATTATTGGGTAAG+TGG - chr4_1:15613415-15613434 None:intergenic 25.0%
!!! TTTTTTTTGAGGGAATTGTA+TGG - chr4_1:15613986-15614005 None:intergenic 25.0%
! CATTGATGAAAAATGAAGTT+TGG + chr4_1:15614160-15614179 Msa0537340:intron 25.0%
! GAAAGGAGAAATAAGAAATT+TGG + chr4_1:15614319-15614338 Msa0537340:CDS 25.0%
!! TCAAAATTGTCCTTATTTGA+AGG + chr4_1:15614376-15614395 Msa0537340:CDS 25.0%
! ACATATAATATTGTCTTTGC+TGG - chr4_1:15614497-15614516 None:intergenic 25.0%
!! AGAACTTTCTAAAAATCTCT+CGG - chr4_1:15614579-15614598 None:intergenic 25.0%
! TCCCTTTATATTAACTATGT+TGG + chr4_1:15614841-15614860 Msa0537340:three_prime_UTR 25.0%
! TTTACTCTGCAATGTTTATT+AGG + chr4_1:15614894-15614913 Msa0537340:three_prime_UTR 25.0%
! TTACTCTGCAATGTTTATTA+GGG + chr4_1:15614895-15614914 Msa0537340:three_prime_UTR 25.0%
ACAAATACAAATAATCCACC+TGG + chr4_1:15611585-15611604 Msa0537340:CDS 30.0%
TGTAGAAGATTCCCTATTAT+TGG - chr4_1:15611624-15611643 None:intergenic 30.0%
!!! GAAATTGTTTTTGCTCCATA+TGG + chr4_1:15611846-15611865 Msa0537340:CDS 30.0%
AGAATAGTATGATACACGTT+TGG - chr4_1:15611922-15611941 None:intergenic 30.0%
! ATGATGGAATTGAGAAAAGT+AGG + chr4_1:15612087-15612106 Msa0537340:CDS 30.0%
ATTGAGAAAAGTAGGTTTCA+TGG + chr4_1:15612095-15612114 Msa0537340:CDS 30.0%
! TGCTGATTATATTCCATTCA+CGG + chr4_1:15612160-15612179 Msa0537340:CDS 30.0%
CCTTGAAATTTCTATCAAGA+CGG - chr4_1:15612217-15612236 None:intergenic 30.0%
!! TCAGTAATTTGCTCTCTATT+CGG - chr4_1:15612284-15612303 None:intergenic 30.0%
ATCAACTTTGATCACATCAA+AGG + chr4_1:15612365-15612384 Msa0537340:CDS 30.0%
TCAACTTTGATCACATCAAA+GGG + chr4_1:15612366-15612385 Msa0537340:CDS 30.0%
AAGACCAAAGAATTAGTGTT+TGG + chr4_1:15612641-15612660 Msa0537340:intron 30.0%
ATAGATAGTTATAAAAGGGG+AGG + chr4_1:15613135-15613154 Msa0537340:intron 30.0%
TCTCTTTCTATCTCATGATT+AGG + chr4_1:15613227-15613246 Msa0537340:intron 30.0%
CTCTTTCTATCTCATGATTA+GGG + chr4_1:15613228-15613247 Msa0537340:intron 30.0%
TCTTTCTATCTCATGATTAG+GGG + chr4_1:15613229-15613248 Msa0537340:intron 30.0%
AACTCAACCCAAAAATTAGT+GGG + chr4_1:15613797-15613816 Msa0537340:intron 30.0%
!! TTATTTTACATCACCCAAAC+CGG + chr4_1:15613854-15613873 Msa0537340:intron 30.0%
!!! TACCCTATTTAGTTTGGTTT+TGG + chr4_1:15613879-15613898 Msa0537340:intron 30.0%
!!! ACCCTATTTAGTTTGGTTTT+GGG + chr4_1:15613880-15613899 Msa0537340:intron 30.0%
ACCCAAAACCAAACTAAATA+GGG - chr4_1:15613884-15613903 None:intergenic 30.0%
AACCCAAAACCAAACTAAAT+AGG - chr4_1:15613885-15613904 None:intergenic 30.0%
AAATGTTGTGTACACTTCTT+TGG - chr4_1:15613962-15613981 None:intergenic 30.0%
! GTTCGTACTCACAATAATTT+TGG + chr4_1:15614076-15614095 Msa0537340:intron 30.0%
AATTCGTTCTAACAAGATAG+AGG - chr4_1:15614129-15614148 None:intergenic 30.0%
TTCACTTTACTCATTACTCT+TGG - chr4_1:15614302-15614321 None:intergenic 30.0%
AGAGTAATGAGTAAAGTGAA+AGG + chr4_1:15614302-15614321 Msa0537340:CDS 30.0%
TTAACTACAGCCTTCAAATA+AGG - chr4_1:15614389-15614408 None:intergenic 30.0%
! GAACTTTCTAAAAATCTCTC+GGG - chr4_1:15614578-15614597 None:intergenic 30.0%
ATCTTCTCTATTCGTTTGAT+TGG + chr4_1:15614705-15614724 Msa0537340:CDS 30.0%
TTTGATTGGAAATTACCACA+TGG + chr4_1:15614719-15614738 Msa0537340:CDS 30.0%
TTGATTGGAAATTACCACAT+GGG + chr4_1:15614720-15614739 Msa0537340:CDS 30.0%
TAAAGGGATGTATCTACTTA+GGG - chr4_1:15614829-15614848 None:intergenic 30.0%
ATAAAGGGATGTATCTACTT+AGG - chr4_1:15614830-15614849 None:intergenic 30.0%
TAGGATTCTCTTCCTTTCAT+AGG + chr4_1:15611469-15611488 Msa0537340:five_prime_UTR 35.0%
TAATGTCACTCACCTATGAA+AGG - chr4_1:15611484-15611503 None:intergenic 35.0%
TTGTGGAAGAACATAAGCAA+AGG - chr4_1:15611558-15611577 None:intergenic 35.0%
CTAAAGGCCTTCCAATAATA+GGG + chr4_1:15611610-15611629 Msa0537340:CDS 35.0%
GAAGATTCCCTATTATTGGA+AGG - chr4_1:15611620-15611639 None:intergenic 35.0%
! CCAAGTTGAAGTGAAAACAA+AGG - chr4_1:15611702-15611721 None:intergenic 35.0%
!!! CCTTTGTTTTCACTTCAACT+TGG + chr4_1:15611699-15611718 Msa0537340:CDS 35.0%
! ACTTCAACTTGGTTTAAGAC+CGG + chr4_1:15611710-15611729 Msa0537340:CDS 35.0%
! TTGCTCCATATGGTGATTTT+TGG + chr4_1:15611856-15611875 Msa0537340:CDS 35.0%
TCTCTCCAAAAATCACCATA+TGG - chr4_1:15611864-15611883 None:intergenic 35.0%
! ATAATATGTCGGACTGCTTT+TGG + chr4_1:15612050-15612069 Msa0537340:CDS 35.0%
!! TAATATGTCGGACTGCTTTT+GGG + chr4_1:15612051-15612070 Msa0537340:CDS 35.0%
GCTGATTATATTCCATTCAC+GGG + chr4_1:15612161-15612180 Msa0537340:CDS 35.0%
ATTATATTCCATTCACGGGT+TGG + chr4_1:15612165-15612184 Msa0537340:CDS 35.0%
CCGTCTTGATAGAAATTTCA+AGG + chr4_1:15612214-15612233 Msa0537340:CDS 35.0%
AGAGCAAATTACTGATGAAG+AGG + chr4_1:15612289-15612308 Msa0537340:CDS 35.0%
GTGACCAAACACTAATTCTT+TGG - chr4_1:15612648-15612667 None:intergenic 35.0%
!! TTGATTTGGTCTTGTGATCA+TGG + chr4_1:15612769-15612788 Msa0537340:intron 35.0%
! ACCTCAATAATTTGTGTGTC+CGG + chr4_1:15612798-15612817 Msa0537340:intron 35.0%
TGATAGTTTAGTGACGTGAT+AGG - chr4_1:15612960-15612979 None:intergenic 35.0%
GAGGAAAAGGAGAAAAGATA+AGG - chr4_1:15613061-15613080 None:intergenic 35.0%
!! CAAAAAAAATGGGTTGGGTT+GGG + chr4_1:15613304-15613323 Msa0537340:intron 35.0%
!!! TAAGTGGGTTTTTTGGGTTT+GGG - chr4_1:15613399-15613418 None:intergenic 35.0%
!!! ATTGGGTAAGTGGGTTTTTT+GGG - chr4_1:15613405-15613424 None:intergenic 35.0%
!!! TATTGGGTAAGTGGGTTTTT+TGG - chr4_1:15613406-15613425 None:intergenic 35.0%
!!! TTTTTGGGTTGAGTTGGATT+GGG - chr4_1:15613792-15613811 None:intergenic 35.0%
!!! ATTTTTGGGTTGAGTTGGAT+TGG - chr4_1:15613793-15613812 None:intergenic 35.0%
!!! CACTAATTTTTGGGTTGAGT+TGG - chr4_1:15613798-15613817 None:intergenic 35.0%
CAACTCAACCCAAAAATTAG+TGG + chr4_1:15613796-15613815 Msa0537340:intron 35.0%
! TTATAGTATTGGGTGGGTTT+GGG - chr4_1:15613827-15613846 None:intergenic 35.0%
AAACCCACCCAATACTATAA+CGG + chr4_1:15613827-15613846 Msa0537340:intron 35.0%
TAACCACCCGTTATAGTATT+GGG - chr4_1:15613837-15613856 None:intergenic 35.0%
ATAACCACCCGTTATAGTAT+TGG - chr4_1:15613838-15613857 None:intergenic 35.0%
TGGTGTATGTATCATGAGTA+GGG - chr4_1:15613942-15613961 None:intergenic 35.0%
TTGGTGTATGTATCATGAGT+AGG - chr4_1:15613943-15613962 None:intergenic 35.0%
!! TAGAACAACTTTTCTAGCAG+TGG + chr4_1:15614028-15614047 Msa0537340:intron 35.0%
! TTTCTAGCAGTGGTAAGTAA+AGG + chr4_1:15614038-15614057 Msa0537340:intron 35.0%
! ATCATAAAGCACCTCTTTAC+AGG + chr4_1:15614205-15614224 Msa0537340:intron 35.0%
TACAAGCATATCCTGTAAAG+AGG - chr4_1:15614219-15614238 None:intergenic 35.0%
! CAATTTTCGATAGATTCCCT+TGG - chr4_1:15614452-15614471 None:intergenic 35.0%
TTCAGAGAGATCCAGATATT+TGG + chr4_1:15614531-15614550 Msa0537340:CDS 35.0%
TCTGGGTTTATCCAAATATC+TGG - chr4_1:15614545-15614564 None:intergenic 35.0%
TCTCGGGATAAAATTCTTCT+GGG - chr4_1:15614562-15614581 None:intergenic 35.0%
ACGAATAGAGAAGATTTGCA+AGG - chr4_1:15614700-15614719 None:intergenic 35.0%
ATTGATACATCAATGCTTCC+AGG + chr4_1:15614758-15614777 Msa0537340:CDS 35.0%
TTGATACATCAATGCTTCCA+GGG + chr4_1:15614759-15614778 Msa0537340:CDS 35.0%
AATAATCCACCTGGTCCTAA+AGG + chr4_1:15611594-15611613 Msa0537340:CDS 40.0%
CCTATTATTGGAAGGCCTTT+AGG - chr4_1:15611612-15611631 None:intergenic 40.0%
CCTAAAGGCCTTCCAATAAT+AGG + chr4_1:15611609-15611628 Msa0537340:CDS 40.0%
GCTGAAGAAACAACAATAGC+CGG - chr4_1:15611732-15611751 None:intergenic 40.0%
GGGAAAAGCTATGAAGATGA+TGG + chr4_1:15612071-15612090 Msa0537340:CDS 40.0%
!! AAAAAAGCTTGCTGCAAGCA+AGG - chr4_1:15612141-15612160 None:intergenic 40.0%
TCCGGACACACAAATTATTG+AGG - chr4_1:15612802-15612821 None:intergenic 40.0%
! AGAAATGCCAACTTTTGCGT+GGG - chr4_1:15612846-15612865 None:intergenic 40.0%
AAGAGAGTCAAGAGAGGAAA+AGG - chr4_1:15613074-15613093 None:intergenic 40.0%
GGGAGGAAAGTAAAAAGAAG+AGG + chr4_1:15613152-15613171 Msa0537340:intron 40.0%
!! TCATGATTAGGGGTGTTCAT+GGG + chr4_1:15613239-15613258 Msa0537340:intron 40.0%
!!! TTTTTTAGGTGGGTTTGACC+GGG - chr4_1:15613283-15613302 None:intergenic 40.0%
!!! GTTTTTTAGGTGGGTTTGAC+CGG - chr4_1:15613284-15613303 None:intergenic 40.0%
!!! CCAACCCAACCCATTTTTTT+TGG - chr4_1:15613306-15613325 None:intergenic 40.0%
!! CCAAAAAAAATGGGTTGGGT+TGG + chr4_1:15613303-15613322 Msa0537340:intron 40.0%
!!! GTAAGTGGGTTTTTTGGGTT+TGG - chr4_1:15613400-15613419 None:intergenic 40.0%
!! GTTGAGTTGGATTGGGTAAT+GGG - chr4_1:15613785-15613804 None:intergenic 40.0%
! GGGCAAACCCACTAATTTTT+GGG - chr4_1:15613807-15613826 None:intergenic 40.0%
! TGGGCAAACCCACTAATTTT+TGG - chr4_1:15613808-15613827 None:intergenic 40.0%
! GTTATAGTATTGGGTGGGTT+TGG - chr4_1:15613828-15613847 None:intergenic 40.0%
AACCCACCCAATACTATAAC+GGG + chr4_1:15613828-15613847 Msa0537340:intron 40.0%
! TAAATAGGGTACTCCGGTTT+GGG - chr4_1:15613870-15613889 None:intergenic 40.0%
! CCAAACTAAATAGGGTACTC+CGG - chr4_1:15613876-15613895 None:intergenic 40.0%
! TTTGTGGGTGAGTTTGAGTT+GGG - chr4_1:15613916-15613935 None:intergenic 40.0%
GGTGTATGTATCATGAGTAG+GGG - chr4_1:15613941-15613960 None:intergenic 40.0%
CTCTCGGGATAAAATTCTTC+TGG - chr4_1:15614563-15614582 None:intergenic 40.0%
GACTTCGAACTAATACCGTT+TGG + chr4_1:15614617-15614636 Msa0537340:CDS 40.0%
TGCAAGGATAAGTTCCAATG+AGG - chr4_1:15614684-15614703 None:intergenic 40.0%
TTGGAAATTACCACATGGGT+TGG + chr4_1:15614724-15614743 Msa0537340:CDS 40.0%
!! ATTACCACATGGGTTGGTAA+AGG + chr4_1:15614730-15614749 Msa0537340:CDS 40.0%
! TCCTCTTTGTCTTATTGCCA+AGG + chr4_1:15614802-15614821 Msa0537340:CDS 40.0%
ACCTTGGCAATAAGACAAAG+AGG - chr4_1:15614806-15614825 None:intergenic 40.0%
ATGTATCTACTTAGGGACCT+TGG - chr4_1:15614822-15614841 None:intergenic 40.0%
CTATCAATCCAACCCGTGAA+TGG - chr4_1:15612176-15612195 None:intergenic 45.0%
!! CATTCACGGGTTGGATTGAT+AGG + chr4_1:15612174-15612193 Msa0537340:CDS 45.0%
TCACATCAAAGGGATCCTCA+CGG + chr4_1:15612376-15612395 Msa0537340:CDS 45.0%
! GAGAAATGCCAACTTTTGCG+TGG - chr4_1:15612847-15612866 None:intergenic 45.0%
GAGAGAAAGAGAGTCAAGAG+AGG - chr4_1:15613080-15613099 None:intergenic 45.0%
!! CTCATGATTAGGGGTGTTCA+TGG + chr4_1:15613238-15613257 Msa0537340:intron 45.0%
!! ATTAGGGGTGTTCATGGGTT+GGG + chr4_1:15613244-15613263 Msa0537340:intron 45.0%
TTGGGTCAACCTAGAAAACC+CGG + chr4_1:15613262-15613281 Msa0537340:intron 45.0%
!! AATGGGTTGGGTTGGGTAAA+TGG + chr4_1:15613311-15613330 Msa0537340:intron 45.0%
!! ATGGGTTGGGTTGGGTAAAT+GGG + chr4_1:15613312-15613331 Msa0537340:intron 45.0%
!! GGTTGAGTTGGATTGGGTAA+TGG - chr4_1:15613786-15613805 None:intergenic 45.0%
! CACCCGTTATAGTATTGGGT+GGG - chr4_1:15613833-15613852 None:intergenic 45.0%
! CTAAATAGGGTACTCCGGTT+TGG - chr4_1:15613871-15613890 None:intergenic 45.0%
! CCGGAGTACCCTATTTAGTT+TGG + chr4_1:15613873-15613892 Msa0537340:intron 45.0%
GTTTGTGGGTGAGTTTGAGT+TGG - chr4_1:15613917-15613936 None:intergenic 45.0%
!! TCATGAGTAGGGGTGTTTGT+GGG - chr4_1:15613931-15613950 None:intergenic 45.0%
!! ATCATGAGTAGGGGTGTTTG+TGG - chr4_1:15613932-15613951 None:intergenic 45.0%
GGATATGCTTGTAGCTGCAA+CGG + chr4_1:15614226-15614245 Msa0537340:intron 45.0%
CACATCAGCAGCATCAGTTT+GGG + chr4_1:15614253-15614272 Msa0537340:CDS 45.0%
ATTCCCTTGGCACAAGTAGT+GGG - chr4_1:15614439-15614458 None:intergenic 45.0%
! GAACTAATACCGTTTGGAGC+TGG + chr4_1:15614623-15614642 Msa0537340:CDS 45.0%
ATTCTACGACCAGCTCCAAA+CGG - chr4_1:15614635-15614654 None:intergenic 45.0%
AATTTGCCCCGGTATACCTA+TGG + chr4_1:15614652-15614671 Msa0537340:CDS 45.0%
TCTTCCTTTACCAACCCATG+TGG - chr4_1:15614737-15614756 None:intergenic 45.0%
!! AAAAAAAAAAAAGTTTAAAA+GGG - chr4_1:15612422-15612441 None:intergenic 5.0%
!! AAAAAAAAAAAAAGTTTAAA+AGG - chr4_1:15612423-15612442 None:intergenic 5.0%
!! TAAAAAATATTAACATTATT+GGG - chr4_1:15613422-15613441 None:intergenic 5.0%
!! ATAAAAAATATTAACATTAT+TGG - chr4_1:15613423-15613442 None:intergenic 5.0%
!! ATTGGAAGGCCTTTAGGACC+AGG - chr4_1:15611606-15611625 None:intergenic 50.0%
GGTTGGATTGATAGGCTCAG+AGG + chr4_1:15612182-15612201 Msa0537340:CDS 50.0%
TGTTGTGCCCACGCAAAAGT+TGG + chr4_1:15612836-15612855 Msa0537340:intron 50.0%
!! GATTAGGGGTGTTCATGGGT+TGG + chr4_1:15613243-15613262 Msa0537340:intron 50.0%
! TGGGTTTGACCGGGTTTTCT+AGG - chr4_1:15613274-15613293 None:intergenic 50.0%
!! GTTGGGTTGGGTAAATGGGT+GGG + chr4_1:15613316-15613335 Msa0537340:intron 50.0%
GTTGGGTAAATGGGTGGGTA+TGG + chr4_1:15613321-15613340 Msa0537340:intron 50.0%
!!! GGGTTTTTTGGGTTTGGGTC+TGG - chr4_1:15613394-15613413 None:intergenic 50.0%
! CCACCCGTTATAGTATTGGG+TGG - chr4_1:15613834-15613853 None:intergenic 50.0%
! CCACCCAATACTATAACGGG+TGG + chr4_1:15613831-15613850 Msa0537340:intron 50.0%
!! GGGTGAGTTTGAGTTGGGAT+TGG - chr4_1:15613911-15613930 None:intergenic 50.0%
CCAAACTGATGCTGCTGATG+TGG - chr4_1:15614255-15614274 None:intergenic 50.0%
CCACATCAGCAGCATCAGTT+TGG + chr4_1:15614252-15614271 Msa0537340:CDS 50.0%
TTCCCTTGGCACAAGTAGTG+GGG - chr4_1:15614438-15614457 None:intergenic 50.0%
GATTCCCTTGGCACAAGTAG+TGG - chr4_1:15614440-15614459 None:intergenic 50.0%
CAACTGCCATAGGTATACCG+GGG - chr4_1:15614661-15614680 None:intergenic 50.0%
GCAACTGCCATAGGTATACC+GGG - chr4_1:15614662-15614681 None:intergenic 50.0%
GGCAACTGCCATAGGTATAC+CGG - chr4_1:15614663-15614682 None:intergenic 50.0%
ACCTATGGCAGTTGCCTCAT+TGG + chr4_1:15614667-15614686 Msa0537340:CDS 50.0%
TCCAATGAGGCAACTGCCAT+AGG - chr4_1:15614671-15614690 None:intergenic 50.0%
TTCTTGTGCTGAGTGATCCC+TGG - chr4_1:15614779-15614798 None:intergenic 50.0%
!! GGTTGGGTTGGGTAAATGGG+TGG + chr4_1:15613315-15613334 Msa0537340:intron 55.0%
AGCCCCACTACTTGTGCCAA+GGG + chr4_1:15614433-15614452 Msa0537340:CDS 55.0%
GCTGGTCGTAGAATTTGCCC+CGG + chr4_1:15614641-15614660 Msa0537340:CDS 55.0%
!! GGAAGGCCTTTAGGACCAGG+TGG - chr4_1:15611603-15611622 None:intergenic 60.0%
! GCACAAGTAGTGGGGCTGGT+AGG - chr4_1:15614430-15614449 None:intergenic 60.0%
! CTTGGCACAAGTAGTGGGGC+TGG - chr4_1:15614434-15614453 None:intergenic 60.0%
CAGCCCCACTACTTGTGCCA+AGG + chr4_1:15614432-15614451 Msa0537340:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 15611433 15614928 15611433 ID=Msa0537340;Name=Msa0537340
chr4_1 mRNA 15611433 15614928 15611433 ID=Msa0537340-mRNA-1;Parent=Msa0537340;Name=Msa0537340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=80|1|1|1|1|1|2|93|497
chr4_1 exon 15611433 15612397 15611433 ID=Msa0537340-mRNA-1:exon:4761;Parent=Msa0537340-mRNA-1
chr4_1 exon 15614227 15614928 15614227 ID=Msa0537340-mRNA-1:exon:4762;Parent=Msa0537340-mRNA-1
chr4_1 five_prime_UTR 15611433 15611512 15611433 ID=Msa0537340-mRNA-1:five_prime_utr;Parent=Msa0537340-mRNA-1
chr4_1 CDS 15611513 15612397 15611513 ID=Msa0537340-mRNA-1:cds;Parent=Msa0537340-mRNA-1
chr4_1 CDS 15614227 15614835 15614227 ID=Msa0537340-mRNA-1:cds;Parent=Msa0537340-mRNA-1
chr4_1 three_prime_UTR 15614836 15614928 15614836 ID=Msa0537340-mRNA-1:three_prime_utr;Parent=Msa0537340-mRNA-1
Gene Sequence

>Msa0537340

ATGTTGCCGATACTACTTTTACTTGTTCTGTGTCTAACTCTACCTTTGCTTATGTTCTTCCACAAACATAAAACAAATACAAATAATCCACCTGGTCCTAAAGGCCTTCCAATAATAGGGAATCTTCTACAACTAGATATCTCAAATCTTCATCTTCAATTTTCTCAATTCTCAAAGATATATGGTCCTTTGTTTTCACTTCAACTTGGTTTAAGACCGGCTATTGTTGTTTCTTCAGCTGAAATTGCCAAAGAAGTATTCAAAAACAATGATCATGTGTTTTCTAATAGACCTATATCATATGGTCAAAACATATTGTCTTATAATGGGTCAGAAATTGTTTTTGCTCCATATGGTGATTTTTGGAGAGAAATAAGAAAAATTTGTGCTATTCATATTTTTAGTTCCAAACGTGTATCATACTATTCTTCTATAAGAATATTTGAGGTGAAGAAAATGATCAAAAATATTTCAGTGCATGCTGATTGTTCAAATGTTACAAATTTGAGTGAGTTGTTGATTTCACTCTCAAGTACTATAATATGTCGGACTGCTTTTGGGAAAAGCTATGAAGATGATGGAATTGAGAAAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCCTTGCTTGCAGCAAGCTTTTTTGCTGATTATATTCCATTCACGGGTTGGATTGATAGGCTCAGAGGATTGCATAGCCGTCTTGATAGAAATTTCAAGGAGTTTGATGAATTTTATCAAGAGATTATTGATGAACATTTGGATCCGAATAGAGAGCAAATTACTGATGAAGAGGATATTGTTGATGTCTTACTTGAACTCAAGAAAAAACGCTCATTTTCATTTGATATCAACTTTGATCACATCAAAGGGATCCTCACGGATATGCTTGTAGCTGCAACGGATACCACATCAGCAGCATCAGTTTGGGCTATGACTGCTCTAATAAAAAATCCAAGAGTAATGAGTAAAGTGAAAGGAGAAATAAGAAATTTGGGAGTTAAAAAAGATTTTTTATATGAAGATGATATTCAAAATTGTCCTTATTTGAAGGCTGTAGTTAAAGAGACGCTAAGATTACACCTACCAGCCCCACTACTTGTGCCAAGGGAATCTATCGAAAATTGTACTATAAATGGATACAACATTCCAGCAAAGACAATATTATATGTAAATGCTTGGGCTATTCAGAGAGATCCAGATATTTGGATAAACCCAGAAGAATTTTATCCCGAGAGATTTTTAGAAAGTTCTATAAATTTTATTGGACAAGACTTCGAACTAATACCGTTTGGAGCTGGTCGTAGAATTTGCCCCGGTATACCTATGGCAGTTGCCTCATTGGAACTTATCCTTGCAAATCTTCTCTATTCGTTTGATTGGAAATTACCACATGGGTTGGTAAAGGAAGATATTGATACATCAATGCTTCCAGGGATCACTCAGCACAAGAAGAATCCTCTTTGTCTTATTGCCAAGGTCCCTAAGTAG
Protein sequence

>Msa0537340

MLPILLLLVLCLTLPLLMFFHKHKTNTNNPPGPKGLPIIGNLLQLDISNLHLQFSQFSKIYGPLFSLQLGLRPAIVVSSAEIAKEVFKNNDHVFSNRPISYGQNILSYNGSEIVFAPYGDFWREIRKICAIHIFSSKRVSYYSSIRIFEVKKMIKNISVHADCSNVTNLSELLISLSSTIICRTAFGKSYEDDGIEKSRFHGLLHEFQALLAASFFADYIPFTGWIDRLRGLHSRLDRNFKEFDEFYQEIIDEHLDPNREQITDEEDIVDVLLELKKKRSFSFDINFDHIKGILTDMLVAATDTTSAASVWAMTALIKNPRVMSKVKGEIRNLGVKKDFLYEDDIQNCPYLKAVVKETLRLHLPAPLLVPRESIENCTINGYNIPAKTILYVNAWAIQRDPDIWINPEEFYPERFLESSINFIGQDFELIPFGAGRRICPGIPMAVASLELILANLLYSFDWKLPHGLVKEDIDTSMLPGITQHKKNPLCLIAKVPK*