AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0340370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340370 MtrunA17_Chr2g0330151 97.565 575 11 1 1 572 1 575 0.0 1160
Msa0340370 MtrunA17_Chr8g0342491 78.261 575 117 4 3 572 4 575 0.0 937
Msa0340370 MtrunA17_Chr1g0178391 55.396 556 234 8 23 572 21 568 0.0 624
Msa0340370 MtrunA17_Chr7g0266641 55.135 555 237 7 23 571 25 573 0.0 616
Msa0340370 MtrunA17_Chr1g0151241 54.494 534 233 5 44 571 42 571 0.0 600
Msa0340370 MtrunA17_Chr1g0151301 52.757 544 247 5 34 571 6 545 0.0 593
Msa0340370 MtrunA17_Chr1g0151321 48.998 549 265 9 33 571 5 548 0.0 543
Msa0340370 MtrunA17_Chr5g0427521 63.866 357 117 6 62 408 11 365 2.01e-166 478
Msa0340370 MtrunA17_Chr4g0056501 47.180 532 264 9 48 571 112 634 1.85e-158 467
Msa0340370 MtrunA17_Chr3g0079291 45.558 529 274 8 48 571 104 623 4.26e-153 453
Msa0340370 MtrunA17_Chr5g0427511 69.006 171 50 3 405 572 20 190 7.24e-77 241
Msa0340370 MtrunA17_Chr1g0151281 55.276 199 83 3 74 270 76 270 1.48e-70 228
Msa0340370 MtrunA17_Chr1g0151271 46.829 205 108 1 367 570 1 205 1.69e-58 194
Msa0340370 MtrunA17_Chr1g0151251 37.838 74 45 1 278 351 34 106 1.11e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340370 AT3G13790.2 64.602 565 188 7 17 572 20 581 0.0 749
Msa0340370 AT3G13790.1 64.261 568 188 8 17 572 20 584 0.0 744
Msa0340370 AT3G13790.5 65.184 517 169 6 64 572 1 514 0.0 689
Msa0340370 AT3G13790.4 65.184 517 169 6 64 572 1 514 0.0 689
Msa0340370 AT3G13790.3 65.184 517 169 6 64 572 1 514 0.0 689
Msa0340370 AT1G55120.1 56.873 582 224 8 4 572 7 574 0.0 677
Msa0340370 AT1G55120.4 59.004 522 202 6 61 572 15 534 0.0 640
Msa0340370 AT3G13784.1 55.035 576 234 10 3 569 9 568 0.0 639
Msa0340370 AT1G55120.3 58.700 523 204 6 60 572 39 559 0.0 639
Msa0340370 AT1G55120.2 58.925 521 202 6 62 572 17 535 0.0 638
Msa0340370 AT3G13784.2 54.750 579 234 11 3 569 9 571 0.0 634
Msa0340370 AT3G13784.4 54.750 579 234 11 3 569 9 571 0.0 634
Msa0340370 AT3G13784.3 57.143 518 208 8 61 569 6 518 0.0 606
Msa0340370 AT3G52600.1 53.022 579 250 8 6 568 9 581 0.0 592
Msa0340370 AT2G36190.1 53.203 562 241 8 23 568 27 582 0.0 582
Msa0340370 AT3G52600.3 54.702 521 220 6 61 568 10 527 0.0 561
Msa0340370 AT3G52600.2 54.633 518 219 6 64 568 1 515 0.0 557
Msa0340370 AT5G11920.1 49.159 535 256 9 48 572 17 545 3.23e-174 504
Msa0340370 AT5G11920.3 49.031 516 250 8 64 572 1 510 6.93e-166 482
Msa0340370 AT1G62660.1 46.642 536 269 11 48 572 106 635 3.56e-155 459
Msa0340370 AT1G12240.1 44.547 541 274 11 48 572 121 651 4.47e-151 449
Msa0340370 AT1G62660.2 46.154 520 266 10 61 572 24 537 6.37e-149 440
Msa0340370 AT1G62660.4 44.609 473 248 10 108 572 3 469 2.09e-125 377
Msa0340370 AT1G62660.3 44.609 473 248 10 108 572 3 469 2.09e-125 377
Msa0340370 AT5G11920.2 50.933 375 169 8 48 413 17 385 1.39e-123 370

Find 148 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCTTCTCTCTCATTTA+TGG 0.118372 2_4:+61753195 Msa0340370:CDS
TCATTTGAAGTGAATGATTT+TGG 0.143130 2_4:+61755796 Msa0340370:CDS
AAATAAATGCAAGTTCATTT+AGG 0.163015 2_4:+61754369 Msa0340370:CDS
AAGAGAGTTAGCAATAAAAT+TGG 0.204427 2_4:-61753180 None:intergenic
TTGTTATATGCTTTCAATAA+TGG 0.210493 2_4:+61756732 Msa0340370:CDS
AATTAGTATCACTACTTCTT+AGG 0.265234 2_4:-61756820 None:intergenic
CAATCCAAAAGGTGCTGTTT+GGG 0.272533 2_4:+61754067 Msa0340370:CDS
ACTGAATTAACACCAGTAAT+TGG 0.279878 2_4:-61755377 None:intergenic
ACCTTGGTGGGCCAATTGAC+TGG 0.297166 2_4:-61755332 None:intergenic
AATAAATGCAAGTTCATTTA+GGG 0.302444 2_4:+61754370 Msa0340370:CDS
AATGGGTTCTTATTTAATAC+TGG 0.303502 2_4:-61754572 None:intergenic
AAACATGATCACTATTTGAT+TGG 0.304462 2_4:+61754668 Msa0340370:CDS
CATTCAGTGGTGGAGAGTTT+TGG 0.312021 2_4:+61756645 Msa0340370:CDS
ACATGTGCTTAAGGTTAGTT+TGG 0.312368 2_4:+61754637 Msa0340370:CDS
TTAGGGACCCAACTACTTCT+TGG 0.318590 2_4:+61754387 Msa0340370:CDS
AGACTATTCCAAGGGCTATC+TGG 0.320133 2_4:+61755243 Msa0340370:intron
AGCTGAATGTAAAGGATGTT+TGG 0.327426 2_4:-61754513 None:intergenic
TTTCCCCAAACAGCACCTTT+TGG 0.327751 2_4:-61754071 None:intergenic
TCTCAACCGTCGGATATAAA+AGG 0.338299 2_4:+61754164 Msa0340370:CDS
GGTGAATTGATTCCAATTAC+TGG 0.339584 2_4:+61755365 Msa0340370:CDS
CAAAAGGGTGCATCAGTAAA+AGG 0.341096 2_4:+61755868 Msa0340370:CDS
ACAATCCAAAAGGTGCTGTT+TGG 0.345736 2_4:+61754066 Msa0340370:CDS
GATGTCTTTGTTCCGGATAA+TGG 0.347597 2_4:+61754710 Msa0340370:CDS
GGGTATTGGAGAGTATTAAT+TGG 0.349792 2_4:+61754422 Msa0340370:CDS
TGCTTATTATTGTTCACAAA+AGG 0.349820 2_4:-61756961 None:intergenic
TGTTAAGGATGTCTTTGTTC+CGG 0.351247 2_4:+61754703 Msa0340370:CDS
GCTATCTGGCTTCATAAATC+AGG 0.355554 2_4:+61755257 Msa0340370:CDS
TATCCATTTGTCCAATAATT+CGG 0.361523 2_4:-61755824 None:intergenic
ATTCCTGTGTACAAAATTGC+TGG 0.362081 2_4:-61754227 None:intergenic
GAGAATGATATGACCACATA+TGG 0.363306 2_4:+61756126 Msa0340370:CDS
AAGTGATAGGCAGTTCTATA+AGG 0.365296 2_4:-61753303 None:intergenic
TTGATGATGGGAAGAATAGA+AGG 0.368169 2_4:+61754798 Msa0340370:CDS
GTATCAAGACCAATGGTTAA+TGG 0.369664 2_4:-61754590 None:intergenic
ACTTCCAACCTCTCAAGAAT+TGG 0.373141 2_4:+61753322 Msa0340370:CDS
AAAGGTGGTGTTGGACCATT+TGG 0.375969 2_4:+61755886 Msa0340370:CDS
GGCTCAGCCACAATACTTCC+AGG 0.379324 2_4:+61754197 Msa0340370:CDS
TATCAAAGGATCTTGTGAAT+TGG 0.395856 2_4:+61754114 Msa0340370:CDS
TATCAAGACCAATGGTTAAT+GGG 0.398819 2_4:-61754589 None:intergenic
GTGGTTTAATTGAATGAAGT+TGG 0.403508 2_4:-61753144 None:intergenic
CTGCACGTGTTTGCTTCTAA+AGG 0.411259 2_4:+61755910 Msa0340370:CDS
CAAGATCCTTTGATACTGAA+TGG 0.413406 2_4:-61754106 None:intergenic
AGTAGTGATACTAATTAAAC+AGG 0.415338 2_4:+61756827 Msa0340370:three_prime_UTR
AACATGGTGGGTAGCTTCAA+TGG 0.424077 2_4:-61753232 None:intergenic
TTTCCTAGCCAAGAAGTAGT+TGG 0.425634 2_4:-61754395 None:intergenic
TTACATTCAGCTGAAGGAAC+AGG 0.425951 2_4:+61754524 Msa0340370:CDS
AGGCCGAATTATTGGACAAA+TGG 0.428825 2_4:+61755821 Msa0340370:CDS
AACATGATCACTATTTGATT+GGG 0.429903 2_4:+61754669 Msa0340370:CDS
TTCCTAGCCAAGAAGTAGTT+GGG 0.430481 2_4:-61754394 None:intergenic
ACCTCCCTTGATCACCTTGG+TGG 0.438479 2_4:-61755345 None:intergenic
TAGAAGGATCTTGTTGGGTT+GGG 0.438565 2_4:+61754814 Msa0340370:CDS
CTTGAGAGGTTGGAAGTGAT+AGG 0.439207 2_4:-61753316 None:intergenic
CAGATATCAACATAAGAATC+TGG 0.441015 2_4:+61755969 Msa0340370:CDS
TTTGTAGGACCAATGAGATA+TGG 0.447970 2_4:+61754017 Msa0340370:intron
GATATAAAAGGTTGTTGGTC+AGG 0.449680 2_4:+61754176 Msa0340370:CDS
AGATCACAAGATTGAATGCT+TGG 0.449911 2_4:+61756769 Msa0340370:CDS
AAGAATAGAAGGATCTTGTT+GGG 0.450720 2_4:+61754809 Msa0340370:CDS
TACATTAGCAATCCATGATA+AGG 0.451158 2_4:+61756707 Msa0340370:CDS
GGCTAGGAAAAGATGGGTAT+TGG 0.451915 2_4:+61754408 Msa0340370:CDS
TACGTATGAACCCAGTCAAT+TGG 0.452564 2_4:+61755321 Msa0340370:CDS
GAAGAATAGAAGGATCTTGT+TGG 0.453865 2_4:+61754808 Msa0340370:CDS
ACTTCTTGGCTAGGAAAAGA+TGG 0.457660 2_4:+61754401 Msa0340370:CDS
AAAATTGCTGGTTTGCCACC+TGG 0.460562 2_4:-61754215 None:intergenic
GCAACAGTAGGTTCCATCAA+TGG 0.461790 2_4:-61754341 None:intergenic
CCTTGGTGGGCCAATTGACT+GGG 0.462535 2_4:-61755331 None:intergenic
AATGTGTTGAGATATGATTA+TGG 0.466520 2_4:+61754749 Msa0340370:CDS
TTATCCTCAAATCCATTATC+CGG 0.468101 2_4:-61754722 None:intergenic
GCTTATTATTGTTCACAAAA+GGG 0.469856 2_4:-61756960 None:intergenic
GATGTCAAGAAAGGATGGTC+TGG 0.472931 2_4:+61754863 Msa0340370:CDS
TGATGTTAGACATGTGCTTA+AGG 0.473030 2_4:+61754628 Msa0340370:CDS
TGGAAGCAAAGTACATAGAA+AGG 0.475190 2_4:+61754442 Msa0340370:CDS
ATGTGTTGAGATATGATTAT+GGG 0.477790 2_4:+61754750 Msa0340370:CDS
TGGTTTAATTGAATGAAGTT+GGG 0.478880 2_4:-61753143 None:intergenic
TTGGCCCACCAAGGTGATCA+AGG 0.481677 2_4:+61755340 Msa0340370:CDS
TGTTCCGGATAATGGATTTG+AGG 0.485113 2_4:+61754718 Msa0340370:CDS
CATATAACAAAGCCTTATCA+TGG 0.485853 2_4:-61756719 None:intergenic
TTTATATCCGACGGTTGAGA+TGG 0.488421 2_4:-61754161 None:intergenic
CTGACCCATTACTTAGAGAA+TGG 0.488472 2_4:+61754300 Msa0340370:CDS
CCTCCCTTGATCACCTTGGT+GGG 0.490119 2_4:-61755344 None:intergenic
GAACAATAATAAGCATGGTC+AGG 0.490969 2_4:+61756969 Msa0340370:three_prime_UTR
TCTTGTGAATTGGACACCAT+TGG 0.493731 2_4:+61754124 Msa0340370:CDS
AAGATGAACTCTCAAGAGTT+CGG 0.497881 2_4:-61753257 None:intergenic
ATAGAAGGATCTTGTTGGGT+TGG 0.498018 2_4:+61754813 Msa0340370:CDS
TGGGACTTATGATACTGTTA+AGG 0.500179 2_4:+61754688 Msa0340370:CDS
TGATCCAATTCTTGAGAGGT+TGG 0.501083 2_4:-61753326 None:intergenic
ATAAGGTTGATCATGATTTG+AGG 0.502178 2_4:-61753286 None:intergenic
TTCTACCAATACAATCCAAA+AGG 0.504711 2_4:+61754056 Msa0340370:CDS
TTATGAAGCCAGATAGCCCT+TGG 0.506124 2_4:-61755251 None:intergenic
GCAAACACGTGCAGACCAAA+TGG 0.512386 2_4:-61755901 None:intergenic
TACTGGTGTTAATTCAGTAC+AGG 0.515915 2_4:+61755382 Msa0340370:CDS
TCATGTGCAGCGATCAAAGC+AGG 0.519327 2_4:+61755995 Msa0340370:CDS
ACATGGTGGGTAGCTTCAAT+GGG 0.520184 2_4:-61753231 None:intergenic
TAAAGTCCTCCATATCTCAT+TGG 0.522533 2_4:-61754026 None:intergenic
GAAGCTGTCACTAAGAACTT+TGG 0.524205 2_4:+61756179 Msa0340370:CDS
AATAAGAACCCATTAACCAT+TGG 0.524841 2_4:+61754581 Msa0340370:CDS
TTCACCTCCCTTGATCACCT+TGG 0.525217 2_4:-61755348 None:intergenic
AAGATCCTTTGATACTGAAT+GGG 0.527419 2_4:-61754105 None:intergenic
CAAAACTCTCCACCACTGAA+TGG 0.531049 2_4:-61756644 None:intergenic
CGTCGGATATAAAAGGTTGT+TGG 0.531487 2_4:+61754171 Msa0340370:CDS
CAGGGAAACAGTTGGTGCAA+TGG 0.536764 2_4:+61755276 Msa0340370:CDS
GGAAGCAAAGTACATAGAAA+GGG 0.540879 2_4:+61754443 Msa0340370:CDS
TATCCGACGGTTGAGATGGG+TGG 0.543483 2_4:-61754157 None:intergenic
GCATCAGTAAAAGGTGGTGT+TGG 0.545185 2_4:+61755877 Msa0340370:CDS
TTATATCCGACGGTTGAGAT+GGG 0.545918 2_4:-61754160 None:intergenic
CTGTTTGGGGAAATATTGTG+TGG 0.551490 2_4:+61754081 Msa0340370:CDS
CAGCTGAAGGAACAGGAATG+TGG 0.551552 2_4:+61754531 Msa0340370:CDS
TGAATTTGCAGACTATTCCA+AGG 0.553988 2_4:+61755234 Msa0340370:intron
GTTCCTTCAGCTGAATGTAA+AGG 0.562040 2_4:-61754521 None:intergenic
AGCTGAAGGAACAGGAATGT+GGG 0.562527 2_4:+61754532 Msa0340370:CDS
AGTGACAGCTTCTCATGAAG+TGG 0.562807 2_4:-61756168 None:intergenic
CATCCTTTACATTCAGCTGA+AGG 0.563353 2_4:+61754518 Msa0340370:CDS
TTATCATGGATTGCTAATGT+AGG 0.564154 2_4:-61756705 None:intergenic
GTTGTTGATGATGTCAAGAA+AGG 0.565288 2_4:+61754854 Msa0340370:CDS
CTATCTGGCTTCATAAATCA+GGG 0.565560 2_4:+61755258 Msa0340370:CDS
TTTGTGAACAATAATAAGCA+TGG 0.566089 2_4:+61756964 Msa0340370:three_prime_UTR
GTATACGTTAATGAAACTTG+AGG 0.567083 2_4:-61756882 None:intergenic
CCGTTGATCCAATTCTTGAG+AGG 0.568960 2_4:-61753330 None:intergenic
GGTCTTGATACATCTATGAA+TGG 0.571013 2_4:+61754602 Msa0340370:CDS
TCTCAAGAGTTCGGTAAACA+TGG 0.574499 2_4:-61753248 None:intergenic
GACCCAACTACTTCTTGGCT+AGG 0.576656 2_4:+61754392 Msa0340370:CDS
TTTGCCACCTGGAAGTATTG+TGG 0.577652 2_4:-61754204 None:intergenic
AATTGGAGAGATAGCCATTG+TGG 0.581945 2_4:-61753163 None:intergenic
CTTCTTGGCTAGGAAAAGAT+GGG 0.582861 2_4:+61754402 Msa0340370:CDS
TTTAATTGAATGAAGTTGGG+TGG 0.587068 2_4:-61753140 None:intergenic
GTGGGCCCATTCAGTATCAA+AGG 0.592486 2_4:+61754100 Msa0340370:CDS
ATCCACAAAAGTCCCATATG+TGG 0.593272 2_4:-61756139 None:intergenic
AGAATGATATGACCACATAT+GGG 0.594872 2_4:+61756127 Msa0340370:CDS
CAAGAGTTCGGTAAACATGG+TGG 0.598399 2_4:-61753245 None:intergenic
TTCATTCAATTAAACCACAA+TGG 0.602829 2_4:+61753149 Msa0340370:exon
CATAGATGTATCAAGACCAA+TGG 0.605287 2_4:-61754597 None:intergenic
TGGCCCACCAAGGTGATCAA+GGG 0.606547 2_4:+61755341 Msa0340370:CDS
TGTTTGGGGAAATATTGTGT+GGG 0.611046 2_4:+61754082 Msa0340370:CDS
GTGACAGCTTCTCATGAAGT+GGG 0.617462 2_4:-61756167 None:intergenic
AAGAGTTCGGTAAACATGGT+GGG 0.619926 2_4:-61753244 None:intergenic
GTAGGACCAATGAGATATGG+AGG 0.621441 2_4:+61754020 Msa0340370:intron
TCATAAATCAGGGAAACAGT+TGG 0.623557 2_4:+61755268 Msa0340370:CDS
GGGTGGATTGCATGATCCAA+TGG 0.626420 2_4:-61754140 None:intergenic
CCCAGTCAATTGGCCCACCA+AGG 0.627984 2_4:+61755331 Msa0340370:CDS
ACAGATTGACCATTCAGTGG+TGG 0.630975 2_4:+61756635 Msa0340370:intron
CCTCTCAAGAATTGGATCAA+CGG 0.632578 2_4:+61753330 Msa0340370:CDS
TTGATGATGTCAAGAAAGGA+TGG 0.633579 2_4:+61754858 Msa0340370:CDS
AATCCAAAAGGTGCTGTTTG+GGG 0.637524 2_4:+61754068 Msa0340370:CDS
GAATTTGCAGACTATTCCAA+GGG 0.640212 2_4:+61755235 Msa0340370:intron
AATCCACCCATCTCAACCGT+CGG 0.653517 2_4:+61754154 Msa0340370:CDS
ATACTAATTAAACAGGAGAG+TGG 0.656392 2_4:+61756834 Msa0340370:three_prime_UTR
CCCACCAAGGTGATCAAGGG+AGG 0.661740 2_4:+61755344 Msa0340370:CDS
AAGGGTGCATCAGTAAAAGG+TGG 0.677299 2_4:+61755871 Msa0340370:CDS
TTGACAGATTGACCATTCAG+TGG 0.705722 2_4:+61756632 Msa0340370:intron
TCAGCCACAATACTTCCAGG+TGG 0.756866 2_4:+61754200 Msa0340370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATATAGTTAAAATGT+TGG + chr2_4:61753648-61753667 Msa0340370:intron 10.0%
!! AAAATTCACTTTAATATAAA+AGG - chr2_4:61753993-61754012 None:intergenic 10.0%
!!! GATATGATTTTTAATTTTTT+AGG + chr2_4:61755015-61755034 Msa0340370:intron 10.0%
!!! CAATTCAATTTTTTTTTTTT+AGG - chr2_4:61755163-61755182 None:intergenic 10.0%
!! AATTATTGGTATATAATTTA+AGG - chr2_4:61756033-61756052 None:intergenic 10.0%
!!! GTTTTAATTTTACTAATTTA+TGG + chr2_4:61756211-61756230 Msa0340370:intron 10.0%
!! AATATAAATGCTATATATAG+AGG + chr2_4:61753614-61753633 Msa0340370:intron 15.0%
!!! AAAGTAAAAATTTTGTTGAT+TGG + chr2_4:61754483-61754502 Msa0340370:CDS 15.0%
!!! AAGTAAAAATTTTGTTGATT+GGG + chr2_4:61754484-61754503 Msa0340370:CDS 15.0%
!!! ATAGTTTTTACATTTCAATA+TGG + chr2_4:61755407-61755426 Msa0340370:intron 15.0%
!! TCATATATATTAATCAATTG+AGG + chr2_4:61755544-61755563 Msa0340370:intron 15.0%
!!! TAAGTTTGTTTTGAAATTAT+TGG - chr2_4:61756047-61756066 None:intergenic 15.0%
!!! ATATCTTTTAATACTTTGAT+AGG + chr2_4:61756088-61756107 Msa0340370:intron 15.0%
!!! AAATAGTTTATTGATTTCTT+TGG + chr2_4:61756361-61756380 Msa0340370:intron 15.0%
!!! TATAGATAATGTTCTTTTAT+TGG + chr2_4:61756857-61756876 Msa0340370:three_prime_UTR 15.0%
!! GATTAAAATATTTAGCACAA+GGG - chr2_4:61753407-61753426 None:intergenic 20.0%
!! TGATTAAAATATTTAGCACA+AGG - chr2_4:61753408-61753427 None:intergenic 20.0%
!! AGCATTTATATTTGACAAAT+GGG - chr2_4:61753606-61753625 None:intergenic 20.0%
!! TAGCATTTATATTTGACAAA+TGG - chr2_4:61753607-61753626 None:intergenic 20.0%
!! ATATAGTTAAAATGTTGGAA+TGG + chr2_4:61753653-61753672 Msa0340370:intron 20.0%
!!! AAAATTTGTTAAATAGTCCA+GGG - chr2_4:61753833-61753852 None:intergenic 20.0%
!!! TAAAATTTGTTAAATAGTCC+AGG - chr2_4:61753834-61753853 None:intergenic 20.0%
!!! AGTAGATGTTTTGTTTTTTT+TGG + chr2_4:61753926-61753945 Msa0340370:intron 20.0%
!!! TTTTTGGATGAAAAAAAGTT+AGG + chr2_4:61753962-61753981 Msa0340370:intron 20.0%
!!! AAGTGAATTTTTGTTTTTGT+AGG + chr2_4:61754002-61754021 Msa0340370:intron 20.0%
!!! TTTTGAACTTGATGATTATT+TGG - chr2_4:61754257-61754276 None:intergenic 20.0%
!! AAATAAATGCAAGTTCATTT+AGG + chr2_4:61754369-61754388 Msa0340370:CDS 20.0%
!! AATAAATGCAAGTTCATTTA+GGG + chr2_4:61754370-61754389 Msa0340370:CDS 20.0%
!! TTTAATACTGGAAAAAAATC+AGG - chr2_4:61754563-61754582 None:intergenic 20.0%
!!! TCTAAAACATTTTTTGATGA+TGG + chr2_4:61754785-61754804 Msa0340370:CDS 20.0%
!!! CTAAAACATTTTTTGATGAT+GGG + chr2_4:61754786-61754805 Msa0340370:CDS 20.0%
!!! GATGTTTTATAATAGACTAA+AGG + chr2_4:61755504-61755523 Msa0340370:intron 20.0%
!!! TATACATTTTTTTTTTCCAC+AGG + chr2_4:61755759-61755778 Msa0340370:intron 20.0%
!!! CATATAAAGTTAGCAAATTT+TGG - chr2_4:61756405-61756424 None:intergenic 20.0%
!!! CAAAATTTGCTAACTTTATA+TGG + chr2_4:61756403-61756422 Msa0340370:intron 20.0%
!!! AAATTTAAAACATGTGTCAT+CGG - chr2_4:61756490-61756509 None:intergenic 20.0%
!! TTGTTATATGCTTTCAATAA+TGG + chr2_4:61756732-61756751 Msa0340370:CDS 20.0%
! TGGTTTAATTGAATGAAGTT+GGG - chr2_4:61753146-61753165 None:intergenic 25.0%
! TTCATTCAATTAAACCACAA+TGG + chr2_4:61753149-61753168 Msa0340370:exon 25.0%
! AAGAGAGTTAGCAATAAAAT+TGG - chr2_4:61753183-61753202 None:intergenic 25.0%
! AAAGCAAAGTAGAAATTAGT+TGG - chr2_4:61753438-61753457 None:intergenic 25.0%
! TGGAAGTGGTATAAAAAATT+GGG - chr2_4:61753580-61753599 None:intergenic 25.0%
! ATGGAAGTGGTATAAAAAAT+TGG - chr2_4:61753581-61753600 None:intergenic 25.0%
! TATATTTGACAAATGGGTAA+TGG - chr2_4:61753600-61753619 None:intergenic 25.0%
! TTAAATTAATCAATAGTCCC+TGG + chr2_4:61753813-61753832 Msa0340370:intron 25.0%
!! TTTTCCATTCTCTAAGTAAT+GGG - chr2_4:61754307-61754326 None:intergenic 25.0%
!! TTTTTCCATTCTCTAAGTAA+TGG - chr2_4:61754308-61754327 None:intergenic 25.0%
!!! TGAACTTGCATTTATTTTGT+TGG - chr2_4:61754366-61754385 None:intergenic 25.0%
!! AATGGGTTCTTATTTAATAC+TGG - chr2_4:61754575-61754594 None:intergenic 25.0%
! AAACATGATCACTATTTGAT+TGG + chr2_4:61754668-61754687 Msa0340370:CDS 25.0%
! AACATGATCACTATTTGATT+GGG + chr2_4:61754669-61754688 Msa0340370:CDS 25.0%
! AATGTGTTGAGATATGATTA+TGG + chr2_4:61754749-61754768 Msa0340370:CDS 25.0%
! ATGTGTTGAGATATGATTAT+GGG + chr2_4:61754750-61754769 Msa0340370:CDS 25.0%
! AATTGTTATATACTAGTGCA+TGG + chr2_4:61755178-61755197 Msa0340370:intron 25.0%
! TCACAAAAGTTGTTTAAAAG+TGG + chr2_4:61755708-61755727 Msa0340370:intron 25.0%
!!! TCATTTGAAGTGAATGATTT+TGG + chr2_4:61755796-61755815 Msa0340370:CDS 25.0%
! TATCCATTTGTCCAATAATT+CGG - chr2_4:61755827-61755846 None:intergenic 25.0%
!!! TTTTGACTACACAAAATTTG+GGG - chr2_4:61755853-61755872 None:intergenic 25.0%
!!! CTTTTGACTACACAAAATTT+GGG - chr2_4:61755854-61755873 None:intergenic 25.0%
!! CAAATTTTGTGTAGTCAAAA+GGG + chr2_4:61755853-61755872 Msa0340370:CDS 25.0%
! GGAATCATAAACACAATAAT+TGG + chr2_4:61756232-61756251 Msa0340370:intron 25.0%
!! ATGATTTTATCAATACTTCG+TGG - chr2_4:61756315-61756334 None:intergenic 25.0%
!!! TAAAGTTAGCAAATTTTGGT+GGG - chr2_4:61756401-61756420 None:intergenic 25.0%
!! ATAAAGTTAGCAAATTTTGG+TGG - chr2_4:61756402-61756421 None:intergenic 25.0%
! TAACTTTATATGGATGTAGA+TGG + chr2_4:61756413-61756432 Msa0340370:intron 25.0%
!! AATTTAAAACATGTGTCATC+GGG - chr2_4:61756489-61756508 None:intergenic 25.0%
! AGACAAAAATGACCAAATAT+AGG - chr2_4:61756580-61756599 None:intergenic 25.0%
!!! ATTTGGTCATTTTTGTCTTT+TGG + chr2_4:61756582-61756601 Msa0340370:intron 25.0%
! AATTAGTATCACTACTTCTT+AGG - chr2_4:61756823-61756842 None:intergenic 25.0%
! AGTAGTGATACTAATTAAAC+AGG + chr2_4:61756827-61756846 Msa0340370:three_prime_UTR 25.0%
! GCTTATTATTGTTCACAAAA+GGG - chr2_4:61756963-61756982 None:intergenic 25.0%
! TGCTTATTATTGTTCACAAA+AGG - chr2_4:61756964-61756983 None:intergenic 25.0%
! TTTGTGAACAATAATAAGCA+TGG + chr2_4:61756964-61756983 Msa0340370:three_prime_UTR 25.0%
GTGGTTTAATTGAATGAAGT+TGG - chr2_4:61753147-61753166 None:intergenic 30.0%
! ATAAGGTTGATCATGATTTG+AGG - chr2_4:61753289-61753308 None:intergenic 30.0%
ACATGTTATGCTGATCAAAA+TGG + chr2_4:61753476-61753495 Msa0340370:intron 30.0%
! ACATCCTGATTTTGTATAGT+AGG + chr2_4:61753685-61753704 Msa0340370:intron 30.0%
! CATCCTGATTTTGTATAGTA+GGG + chr2_4:61753686-61753705 Msa0340370:intron 30.0%
! TCATCCAAAAAGTGTAGAAA+AGG - chr2_4:61753953-61753972 None:intergenic 30.0%
TTCTACCAATACAATCCAAA+AGG + chr2_4:61754056-61754075 Msa0340370:CDS 30.0%
AAGATCCTTTGATACTGAAT+GGG - chr2_4:61754108-61754127 None:intergenic 30.0%
TATCAAAGGATCTTGTGAAT+TGG + chr2_4:61754114-61754133 Msa0340370:CDS 30.0%
! AATGGGTCAGACATATTTTT+GGG - chr2_4:61754290-61754309 None:intergenic 30.0%
!! TAATGGGTCAGACATATTTT+TGG - chr2_4:61754291-61754310 None:intergenic 30.0%
ATCACCAAAAAATCCATTGA+TGG + chr2_4:61754328-61754347 Msa0340370:CDS 30.0%
!!! TTTATTTTGTTGGCAACAGT+AGG - chr2_4:61754356-61754375 None:intergenic 30.0%
AATAAGAACCCATTAACCAT+TGG + chr2_4:61754581-61754600 Msa0340370:CDS 30.0%
TATCAAGACCAATGGTTAAT+GGG - chr2_4:61754592-61754611 None:intergenic 30.0%
TTATCCTCAAATCCATTATC+CGG - chr2_4:61754725-61754744 None:intergenic 30.0%
AAGAATAGAAGGATCTTGTT+GGG + chr2_4:61754809-61754828 Msa0340370:CDS 30.0%
! AGATTTTCTACTTCTTTCAC+TGG - chr2_4:61755302-61755321 None:intergenic 30.0%
ACTGAATTAACACCAGTAAT+TGG - chr2_4:61755380-61755399 None:intergenic 30.0%
CTGATTTAACACGTCAATAT+TGG - chr2_4:61755454-61755473 None:intergenic 30.0%
AGGAAAAAAGGTTGTCAATA+TGG - chr2_4:61755600-61755619 None:intergenic 30.0%
TTATTATCCAATCAGAAGAG+AGG - chr2_4:61755620-61755639 None:intergenic 30.0%
!! TGAAGTGAATGATTTTGGAA+AGG + chr2_4:61755801-61755820 Msa0340370:CDS 30.0%
!! CCTTTTGACTACACAAAATT+TGG - chr2_4:61755855-61755874 None:intergenic 30.0%
! CCAAATTTTGTGTAGTCAAA+AGG + chr2_4:61755852-61755871 Msa0340370:CDS 30.0%
CAGATATCAACATAAGAATC+TGG + chr2_4:61755969-61755988 Msa0340370:CDS 30.0%
AGAATGATATGACCACATAT+GGG + chr2_4:61756127-61756146 Msa0340370:CDS 30.0%
!!! TACTTCGTGGTTTTATAATC+AGG - chr2_4:61756302-61756321 None:intergenic 30.0%
AATGCAGAGTTTCCTATATT+TGG + chr2_4:61756565-61756584 Msa0340370:intron 30.0%
! TTATCATGGATTGCTAATGT+AGG - chr2_4:61756708-61756727 None:intergenic 30.0%
TACATTAGCAATCCATGATA+AGG + chr2_4:61756707-61756726 Msa0340370:CDS 30.0%
! CATATAACAAAGCCTTATCA+TGG - chr2_4:61756722-61756741 None:intergenic 30.0%
ATACTAATTAAACAGGAGAG+TGG + chr2_4:61756834-61756853 Msa0340370:three_prime_UTR 30.0%
GTATACGTTAATGAAACTTG+AGG - chr2_4:61756885-61756904 None:intergenic 30.0%
ACTCTCTTCTCTCTCATTTA+TGG + chr2_4:61753195-61753214 Msa0340370:CDS 35.0%
AAGATGAACTCTCAAGAGTT+CGG - chr2_4:61753260-61753279 None:intergenic 35.0%
AAGTGATAGGCAGTTCTATA+AGG - chr2_4:61753306-61753325 None:intergenic 35.0%
TGATCAGCATAACATGTCAA+AGG - chr2_4:61753473-61753492 None:intergenic 35.0%
TGTCCCTACTATACAAAATC+AGG - chr2_4:61753692-61753711 None:intergenic 35.0%
! TGGTCCTTTTCTACACTTTT+TGG + chr2_4:61753946-61753965 Msa0340370:intron 35.0%
TTTGTAGGACCAATGAGATA+TGG + chr2_4:61754017-61754036 Msa0340370:intron 35.0%
TAAAGTCCTCCATATCTCAT+TGG - chr2_4:61754029-61754048 None:intergenic 35.0%
TGTTTGGGGAAATATTGTGT+GGG + chr2_4:61754082-61754101 Msa0340370:CDS 35.0%
CAAGATCCTTTGATACTGAA+TGG - chr2_4:61754109-61754128 None:intergenic 35.0%
! CAACAACCTTTTATATCCGA+CGG - chr2_4:61754173-61754192 None:intergenic 35.0%
GATATAAAAGGTTGTTGGTC+AGG + chr2_4:61754176-61754195 Msa0340370:CDS 35.0%
! AAACCAGCAATTTTGTACAC+AGG + chr2_4:61754224-61754243 Msa0340370:CDS 35.0%
ATTCCTGTGTACAAAATTGC+TGG - chr2_4:61754230-61754249 None:intergenic 35.0%
!!! GTCAGACATATTTTTGGGTA+TGG - chr2_4:61754285-61754304 None:intergenic 35.0%
!!! GGTTCCATCAATGGATTTTT+TGG - chr2_4:61754335-61754354 None:intergenic 35.0%
!! GGGTATTGGAGAGTATTAAT+TGG + chr2_4:61754422-61754441 Msa0340370:CDS 35.0%
TGGAAGCAAAGTACATAGAA+AGG + chr2_4:61754442-61754461 Msa0340370:CDS 35.0%
GGAAGCAAAGTACATAGAAA+GGG + chr2_4:61754443-61754462 Msa0340370:CDS 35.0%
AGCTGAATGTAAAGGATGTT+TGG - chr2_4:61754516-61754535 None:intergenic 35.0%
GTATCAAGACCAATGGTTAA+TGG - chr2_4:61754593-61754612 None:intergenic 35.0%
CATAGATGTATCAAGACCAA+TGG - chr2_4:61754600-61754619 None:intergenic 35.0%
GGTCTTGATACATCTATGAA+TGG + chr2_4:61754602-61754621 Msa0340370:CDS 35.0%
TGATGTTAGACATGTGCTTA+AGG + chr2_4:61754628-61754647 Msa0340370:CDS 35.0%
! ACATGTGCTTAAGGTTAGTT+TGG + chr2_4:61754637-61754656 Msa0340370:CDS 35.0%
TGGGACTTATGATACTGTTA+AGG + chr2_4:61754688-61754707 Msa0340370:CDS 35.0%
TGTTAAGGATGTCTTTGTTC+CGG + chr2_4:61754703-61754722 Msa0340370:CDS 35.0%
!! TTGATGATGGGAAGAATAGA+AGG + chr2_4:61754798-61754817 Msa0340370:CDS 35.0%
GAAGAATAGAAGGATCTTGT+TGG + chr2_4:61754808-61754827 Msa0340370:CDS 35.0%
!! GTTGTTGATGATGTCAAGAA+AGG + chr2_4:61754854-61754873 Msa0340370:CDS 35.0%
!! TTGATGATGTCAAGAAAGGA+TGG + chr2_4:61754858-61754877 Msa0340370:CDS 35.0%
!! TCTGGAATCCATGTAAGTTT+TGG + chr2_4:61754881-61754900 Msa0340370:intron 35.0%
! CTGGAATCCATGTAAGTTTT+GGG + chr2_4:61754882-61754901 Msa0340370:intron 35.0%
! TGGAATCCATGTAAGTTTTG+GGG + chr2_4:61754883-61754902 Msa0340370:intron 35.0%
! ATTAGTTTGACACGCATCTA+GGG - chr2_4:61755069-61755088 None:intergenic 35.0%
! AATTAGTTTGACACGCATCT+AGG - chr2_4:61755070-61755089 None:intergenic 35.0%
TGAATTTGCAGACTATTCCA+AGG + chr2_4:61755234-61755253 Msa0340370:intron 35.0%
GAATTTGCAGACTATTCCAA+GGG + chr2_4:61755235-61755254 Msa0340370:intron 35.0%
! CTATCTGGCTTCATAAATCA+GGG + chr2_4:61755258-61755277 Msa0340370:CDS 35.0%
TCATAAATCAGGGAAACAGT+TGG + chr2_4:61755268-61755287 Msa0340370:CDS 35.0%
! GGTGAATTGATTCCAATTAC+TGG + chr2_4:61755365-61755384 Msa0340370:CDS 35.0%
! TACTGGTGTTAATTCAGTAC+AGG + chr2_4:61755382-61755401 Msa0340370:CDS 35.0%
CAATCAGAAGAGAGGAAAAA+AGG - chr2_4:61755612-61755631 None:intergenic 35.0%
!!! CTTTTTTCCTCTCTTCTGAT+TGG + chr2_4:61755610-61755629 Msa0340370:intron 35.0%
!! TTTTGGAAAGGCCGAATTAT+TGG + chr2_4:61755813-61755832 Msa0340370:CDS 35.0%
GAGAATGATATGACCACATA+TGG + chr2_4:61756126-61756145 Msa0340370:CDS 35.0%
AGATCACAAGATTGAATGCT+TGG + chr2_4:61756769-61756788 Msa0340370:CDS 35.0%
GAACAATAATAAGCATGGTC+AGG + chr2_4:61756969-61756988 Msa0340370:three_prime_UTR 35.0%
AATTGGAGAGATAGCCATTG+TGG - chr2_4:61753166-61753185 None:intergenic 40.0%
AAGAGTTCGGTAAACATGGT+GGG - chr2_4:61753247-61753266 None:intergenic 40.0%
TCTCAAGAGTTCGGTAAACA+TGG - chr2_4:61753251-61753270 None:intergenic 40.0%
ACTTCCAACCTCTCAAGAAT+TGG + chr2_4:61753322-61753341 Msa0340370:CDS 40.0%
TGATCCAATTCTTGAGAGGT+TGG - chr2_4:61753329-61753348 None:intergenic 40.0%
CCTCTCAAGAATTGGATCAA+CGG + chr2_4:61753330-61753349 Msa0340370:CDS 40.0%
AGGGATTGAACTAACCATTG+GGG - chr2_4:61753511-61753530 None:intergenic 40.0%
GAGGGATTGAACTAACCATT+GGG - chr2_4:61753512-61753531 None:intergenic 40.0%
AGAGGGATTGAACTAACCAT+TGG - chr2_4:61753513-61753532 None:intergenic 40.0%
!! TGACAAATGGGTAATGGAAG+TGG - chr2_4:61753594-61753613 None:intergenic 40.0%
! CAGCACCTTTTGGATTGTAT+TGG - chr2_4:61754064-61754083 None:intergenic 40.0%
!! ACAATCCAAAAGGTGCTGTT+TGG + chr2_4:61754066-61754085 Msa0340370:CDS 40.0%
!! CAATCCAAAAGGTGCTGTTT+GGG + chr2_4:61754067-61754086 Msa0340370:CDS 40.0%
!! AATCCAAAAGGTGCTGTTTG+GGG + chr2_4:61754068-61754087 Msa0340370:CDS 40.0%
CTGTTTGGGGAAATATTGTG+TGG + chr2_4:61754081-61754100 Msa0340370:CDS 40.0%
TCTTGTGAATTGGACACCAT+TGG + chr2_4:61754124-61754143 Msa0340370:CDS 40.0%
TTATATCCGACGGTTGAGAT+GGG - chr2_4:61754163-61754182 None:intergenic 40.0%
TTTATATCCGACGGTTGAGA+TGG - chr2_4:61754164-61754183 None:intergenic 40.0%
TCTCAACCGTCGGATATAAA+AGG + chr2_4:61754164-61754183 Msa0340370:CDS 40.0%
CGTCGGATATAAAAGGTTGT+TGG + chr2_4:61754171-61754190 Msa0340370:CDS 40.0%
CTGACCCATTACTTAGAGAA+TGG + chr2_4:61754300-61754319 Msa0340370:CDS 40.0%
TTCCTAGCCAAGAAGTAGTT+GGG - chr2_4:61754397-61754416 None:intergenic 40.0%
TTTCCTAGCCAAGAAGTAGT+TGG - chr2_4:61754398-61754417 None:intergenic 40.0%
ACTTCTTGGCTAGGAAAAGA+TGG + chr2_4:61754401-61754420 Msa0340370:CDS 40.0%
CTTCTTGGCTAGGAAAAGAT+GGG + chr2_4:61754402-61754421 Msa0340370:CDS 40.0%
CATCCTTTACATTCAGCTGA+AGG + chr2_4:61754518-61754537 Msa0340370:CDS 40.0%
GTTCCTTCAGCTGAATGTAA+AGG - chr2_4:61754524-61754543 None:intergenic 40.0%
TTACATTCAGCTGAAGGAAC+AGG + chr2_4:61754524-61754543 Msa0340370:CDS 40.0%
GATGTCTTTGTTCCGGATAA+TGG + chr2_4:61754710-61754729 Msa0340370:CDS 40.0%
!! TGTTCCGGATAATGGATTTG+AGG + chr2_4:61754718-61754737 Msa0340370:CDS 40.0%
ATAGAAGGATCTTGTTGGGT+TGG + chr2_4:61754813-61754832 Msa0340370:CDS 40.0%
TAGAAGGATCTTGTTGGGTT+GGG + chr2_4:61754814-61754833 Msa0340370:CDS 40.0%
AAGTAGCCCCAAAACTTACA+TGG - chr2_4:61754892-61754911 None:intergenic 40.0%
! GCTATCTGGCTTCATAAATC+AGG + chr2_4:61755257-61755276 Msa0340370:CDS 40.0%
TACGTATGAACCCAGTCAAT+TGG + chr2_4:61755321-61755340 Msa0340370:CDS 40.0%
GAAATTTCAACATCAGCCTG+TGG - chr2_4:61755778-61755797 None:intergenic 40.0%
AGGCCGAATTATTGGACAAA+TGG + chr2_4:61755821-61755840 Msa0340370:CDS 40.0%
! CAAAAGGGTGCATCAGTAAA+AGG + chr2_4:61755868-61755887 Msa0340370:CDS 40.0%
ATCCACAAAAGTCCCATATG+TGG - chr2_4:61756142-61756161 None:intergenic 40.0%
GAAGCTGTCACTAAGAACTT+TGG + chr2_4:61756179-61756198 Msa0340370:CDS 40.0%
GGATGTAGATGGTCAAGATA+TGG + chr2_4:61756424-61756443 Msa0340370:intron 40.0%
GGAAACTCTGCATTTGCATT+TGG - chr2_4:61756559-61756578 None:intergenic 40.0%
TTGACAGATTGACCATTCAG+TGG + chr2_4:61756632-61756651 Msa0340370:intron 40.0%
!! ACATGGTGGGTAGCTTCAAT+GGG - chr2_4:61753234-61753253 None:intergenic 45.0%
!! AACATGGTGGGTAGCTTCAA+TGG - chr2_4:61753235-61753254 None:intergenic 45.0%
CAAGAGTTCGGTAAACATGG+TGG - chr2_4:61753248-61753267 None:intergenic 45.0%
CTTGAGAGGTTGGAAGTGAT+AGG - chr2_4:61753319-61753338 None:intergenic 45.0%
CCGTTGATCCAATTCTTGAG+AGG - chr2_4:61753333-61753352 None:intergenic 45.0%
! GGTTAGTTCAATCCCTCTTC+TGG + chr2_4:61753515-61753534 Msa0340370:intron 45.0%
CATCAAGAGAGTCCAGAAGA+GGG - chr2_4:61753530-61753549 None:intergenic 45.0%
TCATCAAGAGAGTCCAGAAG+AGG - chr2_4:61753531-61753550 None:intergenic 45.0%
GTAGGACCAATGAGATATGG+AGG + chr2_4:61754020-61754039 Msa0340370:intron 45.0%
! TTTCCCCAAACAGCACCTTT+TGG - chr2_4:61754074-61754093 None:intergenic 45.0%
!! TTTGCCACCTGGAAGTATTG+TGG - chr2_4:61754207-61754226 None:intergenic 45.0%
!! AAAATTGCTGGTTTGCCACC+TGG - chr2_4:61754218-61754237 None:intergenic 45.0%
GCAACAGTAGGTTCCATCAA+TGG - chr2_4:61754344-61754363 None:intergenic 45.0%
TTAGGGACCCAACTACTTCT+TGG + chr2_4:61754387-61754406 Msa0340370:CDS 45.0%
GGCTAGGAAAAGATGGGTAT+TGG + chr2_4:61754408-61754427 Msa0340370:CDS 45.0%
AGCTGAAGGAACAGGAATGT+GGG + chr2_4:61754532-61754551 Msa0340370:CDS 45.0%
GATGTCAAGAAAGGATGGTC+TGG + chr2_4:61754863-61754882 Msa0340370:CDS 45.0%
AGACTATTCCAAGGGCTATC+TGG + chr2_4:61755243-61755262 Msa0340370:intron 45.0%
TTATGAAGCCAGATAGCCCT+TGG - chr2_4:61755254-61755273 None:intergenic 45.0%
! AAGGGTGCATCAGTAAAAGG+TGG + chr2_4:61755871-61755890 Msa0340370:CDS 45.0%
GCATCAGTAAAAGGTGGTGT+TGG + chr2_4:61755877-61755896 Msa0340370:CDS 45.0%
! AAAGGTGGTGTTGGACCATT+TGG + chr2_4:61755886-61755905 Msa0340370:CDS 45.0%
CTGCACGTGTTTGCTTCTAA+AGG + chr2_4:61755910-61755929 Msa0340370:CDS 45.0%
! GACCACATATGGGACTTTTG+TGG + chr2_4:61756137-61756156 Msa0340370:CDS 45.0%
GTGACAGCTTCTCATGAAGT+GGG - chr2_4:61756170-61756189 None:intergenic 45.0%
AGTGACAGCTTCTCATGAAG+TGG - chr2_4:61756171-61756190 None:intergenic 45.0%
ACAGATTGACCATTCAGTGG+TGG + chr2_4:61756635-61756654 Msa0340370:intron 45.0%
CAAAACTCTCCACCACTGAA+TGG - chr2_4:61756647-61756666 None:intergenic 45.0%
!! CATTCAGTGGTGGAGAGTTT+TGG + chr2_4:61756645-61756664 Msa0340370:CDS 45.0%
!!! ATTTTAACTATATAATATAT+AGG - chr2_4:61753646-61753665 None:intergenic 5.0%
!!! AATTCAATTTTTTTTTTTTA+GGG - chr2_4:61755162-61755181 None:intergenic 5.0%
AATGGACATGCAGACCCCAA+TGG + chr2_4:61753494-61753513 Msa0340370:intron 50.0%
GTGGGCCCATTCAGTATCAA+AGG + chr2_4:61754100-61754119 Msa0340370:CDS 50.0%
!! GGGTGGATTGCATGATCCAA+TGG - chr2_4:61754143-61754162 None:intergenic 50.0%
AATCCACCCATCTCAACCGT+CGG + chr2_4:61754154-61754173 Msa0340370:CDS 50.0%
TCAGCCACAATACTTCCAGG+TGG + chr2_4:61754200-61754219 Msa0340370:CDS 50.0%
GACCCAACTACTTCTTGGCT+AGG + chr2_4:61754392-61754411 Msa0340370:CDS 50.0%
CAGCTGAAGGAACAGGAATG+TGG + chr2_4:61754531-61754550 Msa0340370:CDS 50.0%
! CAGGGAAACAGTTGGTGCAA+TGG + chr2_4:61755276-61755295 Msa0340370:CDS 50.0%
TTCACCTCCCTTGATCACCT+TGG - chr2_4:61755351-61755370 None:intergenic 50.0%
GCAAACACGTGCAGACCAAA+TGG - chr2_4:61755904-61755923 None:intergenic 50.0%
TCATGTGCAGCGATCAAAGC+AGG + chr2_4:61755995-61756014 Msa0340370:CDS 50.0%
!! TCAGTGGTGGAGAGTTTTGG+TGG + chr2_4:61756648-61756667 Msa0340370:CDS 50.0%
!! GTGGAGAGTTTTGGTGGAGA+AGG + chr2_4:61756654-61756673 Msa0340370:CDS 50.0%
TATCCGACGGTTGAGATGGG+TGG - chr2_4:61754160-61754179 None:intergenic 55.0%
GGCTCAGCCACAATACTTCC+AGG + chr2_4:61754197-61754216 Msa0340370:CDS 55.0%
! CCTTGGTGGGCCAATTGACT+GGG - chr2_4:61755334-61755353 None:intergenic 55.0%
! ACCTTGGTGGGCCAATTGAC+TGG - chr2_4:61755335-61755354 None:intergenic 55.0%
TTGGCCCACCAAGGTGATCA+AGG + chr2_4:61755340-61755359 Msa0340370:CDS 55.0%
TGGCCCACCAAGGTGATCAA+GGG + chr2_4:61755341-61755360 Msa0340370:CDS 55.0%
CCTCCCTTGATCACCTTGGT+GGG - chr2_4:61755347-61755366 None:intergenic 55.0%
ACCTCCCTTGATCACCTTGG+TGG - chr2_4:61755348-61755367 None:intergenic 55.0%
CCCAGTCAATTGGCCCACCA+AGG + chr2_4:61755331-61755350 Msa0340370:CDS 60.0%
CCCACCAAGGTGATCAAGGG+AGG + chr2_4:61755344-61755363 Msa0340370:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61753142 61757009 61753142 ID=Msa0340370;Name=Msa0340370
chr2_4 mRNA 61753142 61757009 61753142 ID=Msa0340370-mRNA-1;Parent=Msa0340370;Name=Msa0340370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|6|191|572
chr2_4 exon 61753142 61753351 61753142 ID=Msa0340370-mRNA-1:exon:19484;Parent=Msa0340370-mRNA-1
chr2_4 exon 61754024 61754892 61754024 ID=Msa0340370-mRNA-1:exon:19485;Parent=Msa0340370-mRNA-1
chr2_4 exon 61755245 61755403 61755245 ID=Msa0340370-mRNA-1:exon:19486;Parent=Msa0340370-mRNA-1
chr2_4 exon 61755781 61756016 61755781 ID=Msa0340370-mRNA-1:exon:19487;Parent=Msa0340370-mRNA-1
chr2_4 exon 61756110 61756200 61756110 ID=Msa0340370-mRNA-1:exon:19488;Parent=Msa0340370-mRNA-1
chr2_4 exon 61756639 61757009 61756639 ID=Msa0340370-mRNA-1:exon:19489;Parent=Msa0340370-mRNA-1
chr2_4 five_prime_UTR 61753142 61753167 61753142 ID=Msa0340370-mRNA-1:five_prime_utr;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61753168 61753351 61753168 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61754024 61754892 61754024 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61755245 61755403 61755245 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61755781 61756016 61755781 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61756110 61756200 61756110 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 CDS 61756639 61756818 61756639 ID=Msa0340370-mRNA-1:cds;Parent=Msa0340370-mRNA-1
chr2_4 three_prime_UTR 61756819 61757009 61756819 ID=Msa0340370-mRNA-1:three_prime_utr;Parent=Msa0340370-mRNA-1
Gene Sequence

>Msa0340370

ATGGCTATCTCTCCAATTTTATTGCTAACTCTCTTCTCTCTCATTTATGGCAATTATGTTATTCCCATTGAAGCTACCCACCATGTTTACCGAACTCTTGAGAGTTCATCTTCTGATTCCTCAAATCATGATCAACCTTATAGAACTGCCTATCACTTCCAACCTCTCAAGAATTGGATCAACGGACCAATGAGATATGGAGGACTTTATCATCTGTTCTACCAATACAATCCAAAAGGTGCTGTTTGGGGAAATATTGTGTGGGCCCATTCAGTATCAAAGGATCTTGTGAATTGGACACCATTGGATCATGCAATCCACCCATCTCAACCGTCGGATATAAAAGGTTGTTGGTCAGGCTCAGCCACAATACTTCCAGGTGGCAAACCAGCAATTTTGTACACAGGAATTGATCCAAATAATCATCAAGTTCAAAACATAGCCATACCCAAAAATATGTCTGACCCATTACTTAGAGAATGGAAAAAATCACCAAAAAATCCATTGATGGAACCTACTGTTGCCAACAAAATAAATGCAAGTTCATTTAGGGACCCAACTACTTCTTGGCTAGGAAAAGATGGGTATTGGAGAGTATTAATTGGAAGCAAAGTACATAGAAAGGGAATTGCAATTATGTACAAAAGTAAAAATTTTGTTGATTGGGTTGAAGCCAAACATCCTTTACATTCAGCTGAAGGAACAGGAATGTGGGAGTGTCCTGATTTTTTTCCAGTATTAAATAAGAACCCATTAACCATTGGTCTTGATACATCTATGAATGGTGATGATGTTAGACATGTGCTTAAGGTTAGTTTGGATGACACAAAACATGATCACTATTTGATTGGGACTTATGATACTGTTAAGGATGTCTTTGTTCCGGATAATGGATTTGAGGATAATCAAAATGTGTTGAGATATGATTATGGGAAATATTATGCATCTAAAACATTTTTTGATGATGGGAAGAATAGAAGGATCTTGTTGGGTTGGGCTAATGAATCTTCAAGTGTTGTTGATGATGTCAAGAAAGGATGGTCTGGAATCCATACTATTCCAAGGGCTATCTGGCTTCATAAATCAGGGAAACAGTTGGTGCAATGGCCAGTGAAAGAAGTAGAAAATCTACGTATGAACCCAGTCAATTGGCCCACCAAGGTGATCAAGGGAGGTGAATTGATTCCAATTACTGGTGTTAATTCAGTACAGGCTGATGTTGAAATTTCATTTGAAGTGAATGATTTTGGAAAGGCCGAATTATTGGACAAATGGATAGATCCCCAAATTTTGTGTAGTCAAAAGGGTGCATCAGTAAAAGGTGGTGTTGGACCATTTGGTCTGCACGTGTTTGCTTCTAAAGGCTTGCAAGAGTACACAGCAGTGTTTTTTAGAATATTCAGATATCAACATAAGAATCTGGTTCTCATGTGCAGCGATCAAAGCAGGTCATCTTTGAATAAAGAGAATGATATGACCACATATGGGACTTTTGTGGATGTTGACCCACTTCATGAGAAGCTGTCACTAAGAACTTTGATTGACCATTCAGTGGTGGAGAGTTTTGGTGGAGAAGGAAGAGCTTGCATCACAGCTAGAGTTTATCCTACATTAGCAATCCATGATAAGGCTTTGTTATATGCTTTCAATAATGGAAATTCTGCAGTCAAGATCACAAGATTGAATGCTTGGAGCATGAAGAAAGCAAAAATCAACTAA
Protein sequence

>Msa0340370

MAISPILLLTLFSLIYGNYVIPIEATHHVYRTLESSSSDSSNHDQPYRTAYHFQPLKNWINGPMRYGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTVANKINASSFRDPTTSWLGKDGYWRVLIGSKVHRKGIAIMYKSKNFVDWVEAKHPLHSAEGTGMWECPDFFPVLNKNPLTIGLDTSMNGDDVRHVLKVSLDDTKHDHYLIGTYDTVKDVFVPDNGFEDNQNVLRYDYGKYYASKTFFDDGKNRRILLGWANESSSVVDDVKKGWSGIHTIPRAIWLHKSGKQLVQWPVKEVENLRMNPVNWPTKVIKGGELIPITGVNSVQADVEISFEVNDFGKAELLDKWIDPQILCSQKGASVKGGVGPFGLHVFASKGLQEYTAVFFRIFRYQHKNLVLMCSDQSRSSLNKENDMTTYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAIHDKALLYAFNNGNSAVKITRLNAWSMKKAKIN*