Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0672370 | XP_013455417.1 | 93.532 | 201 | 9 | 1 | 333 | 529 | 96 | 296 | 1.80e-133 | 400 |
Msa0672370 | XP_013455417.1 | 97.959 | 98 | 2 | 0 | 1 | 98 | 1 | 98 | 3.37e-57 | 204 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0672370 | sp|Q9SQ64|COR2_PAPSO | 40.234 | 256 | 137 | 7 | 279 | 527 | 55 | 301 | 8.35e-54 | 187 |
Msa0672370 | sp|Q9SQ64|COR2_PAPSO | 42.529 | 87 | 44 | 3 | 6 | 88 | 9 | 93 | 1.15e-11 | 69.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0672370 | A0A072UK59 | 93.532 | 201 | 9 | 1 | 333 | 529 | 96 | 296 | 8.59e-134 | 400 |
Msa0672370 | A0A072UK59 | 97.959 | 98 | 2 | 0 | 1 | 98 | 1 | 98 | 1.61e-57 | 204 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0672370 | Msa1252370 | 0.900073 | 1.054642e-77 | -8.615850e-47 |
Msa0672370 | Msa1288530 | 0.840090 | 1.071798e-57 | -8.615850e-47 |
Msa0672370 | Msa1288550 | 0.903251 | 4.208934e-79 | -8.615850e-47 |
Msa0672370 | Msa1356370 | 0.913254 | 7.618046e-84 | -8.615850e-47 |
Msa0388850 | Msa0672370 | 0.899943 | 1.200681e-77 | -8.615850e-47 |
Msa0389320 | Msa0672370 | 0.804774 | 1.838401e-49 | -8.615850e-47 |
Msa0281030 | Msa0672370 | 0.908100 | 2.471287e-81 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0672370 | MtrunA17_Chr4g0018921 | 93.532 | 201 | 9 | 1 | 333 | 529 | 96 | 296 | 1.65e-137 | 400 |
Msa0672370 | MtrunA17_Chr4g0018921 | 97.959 | 98 | 2 | 0 | 1 | 98 | 1 | 98 | 3.10e-61 | 204 |
Msa0672370 | MtrunA17_Chr5g0447341 | 93.069 | 101 | 7 | 0 | 191 | 291 | 377 | 477 | 1.10e-53 | 189 |
Msa0672370 | MtrunA17_Chr6g0480021 | 40.833 | 240 | 132 | 3 | 294 | 528 | 50 | 284 | 3.38e-50 | 174 |
Msa0672370 | MtrunA17_Chr6g0480021 | 44.048 | 84 | 45 | 2 | 2 | 83 | 5 | 88 | 8.40e-16 | 78.6 |
Msa0672370 | MtrunA17_Chr6g0479981 | 41.395 | 215 | 118 | 2 | 317 | 527 | 90 | 300 | 5.29e-50 | 174 |
Msa0672370 | MtrunA17_Chr6g0479981 | 45.631 | 103 | 52 | 3 | 6 | 104 | 9 | 111 | 1.50e-17 | 84.0 |
Msa0672370 | MtrunA17_Chr1g0173621 | 39.906 | 213 | 120 | 4 | 321 | 526 | 92 | 303 | 1.52e-48 | 171 |
Msa0672370 | MtrunA17_Chr1g0173621 | 48.889 | 90 | 42 | 3 | 14 | 99 | 20 | 109 | 6.15e-17 | 82.0 |
Msa0672370 | MtrunA17_Chr6g0480011 | 41.827 | 208 | 113 | 3 | 326 | 528 | 99 | 303 | 2.47e-47 | 167 |
Msa0672370 | MtrunA17_Chr6g0480011 | 40.385 | 104 | 52 | 4 | 2 | 98 | 5 | 105 | 1.61e-13 | 71.6 |
Msa0672370 | MtrunA17_Chr8g0368931 | 38.211 | 246 | 137 | 6 | 286 | 526 | 58 | 293 | 4.04e-47 | 167 |
Msa0672370 | MtrunA17_Chr8g0368931 | 40.196 | 102 | 54 | 3 | 3 | 99 | 2 | 101 | 1.64e-12 | 68.6 |
Msa0672370 | MtrunA17_Chr7g0239701 | 36.090 | 266 | 140 | 7 | 279 | 531 | 55 | 303 | 2.96e-46 | 164 |
Msa0672370 | MtrunA17_Chr3g0120471 | 82.178 | 101 | 15 | 1 | 191 | 291 | 376 | 473 | 1.93e-45 | 167 |
Msa0672370 | MtrunA17_Chr8g0368921 | 34.471 | 293 | 171 | 7 | 245 | 528 | 19 | 299 | 2.33e-45 | 162 |
Msa0672370 | MtrunA17_Chr8g0368921 | 40.860 | 93 | 53 | 1 | 8 | 98 | 10 | 102 | 1.37e-15 | 77.8 |
Msa0672370 | MtrunA17_Chr4g0036261 | 43.636 | 165 | 89 | 1 | 371 | 531 | 4 | 168 | 4.83e-40 | 143 |
Msa0672370 | MtrunA17_Chr3g0121001 | 31.206 | 282 | 169 | 8 | 267 | 526 | 24 | 302 | 1.81e-39 | 146 |
Msa0672370 | MtrunA17_Chr3g0121001 | 43.820 | 89 | 47 | 2 | 14 | 99 | 21 | 109 | 1.35e-15 | 77.8 |
Msa0672370 | MtrunA17_Chr4g0009531 | 39.362 | 188 | 100 | 4 | 348 | 528 | 113 | 293 | 1.64e-36 | 138 |
Msa0672370 | MtrunA17_Chr4g0009531 | 39.785 | 93 | 52 | 2 | 7 | 97 | 9 | 99 | 8.05e-14 | 72.4 |
Msa0672370 | MtrunA17_Chr4g0036301 | 43.421 | 152 | 82 | 1 | 380 | 527 | 1 | 152 | 3.20e-35 | 130 |
Msa0672370 | MtrunA17_Chr4g0009581 | 33.096 | 281 | 158 | 7 | 257 | 527 | 24 | 284 | 4.79e-32 | 125 |
Msa0672370 | MtrunA17_Chr4g0009581 | 43.210 | 81 | 42 | 2 | 8 | 87 | 11 | 88 | 1.03e-13 | 72.0 |
Msa0672370 | MtrunA17_Chr4g0036321 | 42.308 | 156 | 86 | 1 | 380 | 531 | 1 | 156 | 1.56e-31 | 120 |
Msa0672370 | MtrunA17_Chr4g0009621 | 35.780 | 218 | 119 | 5 | 314 | 526 | 6 | 207 | 4.41e-31 | 120 |
Msa0672370 | MtrunA17_Chr7g0243551 | 36.723 | 177 | 104 | 3 | 348 | 520 | 119 | 291 | 6.57e-30 | 119 |
Msa0672370 | MtrunA17_Chr5g0447941 | 34.783 | 184 | 113 | 4 | 348 | 526 | 119 | 300 | 6.28e-29 | 116 |
Msa0672370 | MtrunA17_Chr5g0447941 | 46.067 | 89 | 46 | 1 | 12 | 98 | 18 | 106 | 8.30e-18 | 84.3 |
Msa0672370 | MtrunA17_Chr5g0447951 | 34.783 | 184 | 113 | 4 | 348 | 526 | 119 | 300 | 6.53e-29 | 116 |
Msa0672370 | MtrunA17_Chr5g0447951 | 46.067 | 89 | 46 | 1 | 12 | 98 | 18 | 106 | 8.30e-18 | 84.3 |
Msa0672370 | MtrunA17_Chr5g0447961 | 34.783 | 184 | 113 | 4 | 348 | 526 | 119 | 300 | 6.53e-29 | 116 |
Msa0672370 | MtrunA17_Chr5g0447961 | 46.067 | 89 | 46 | 1 | 12 | 98 | 18 | 106 | 8.30e-18 | 84.3 |
Msa0672370 | MtrunA17_Chr3g0144731 | 45.833 | 96 | 52 | 0 | 195 | 290 | 27 | 122 | 1.55e-25 | 102 |
Msa0672370 | MtrunA17_Chr7g0271011 | 40.458 | 131 | 69 | 2 | 165 | 290 | 371 | 497 | 2.25e-25 | 109 |
Msa0672370 | MtrunA17_Chr4g0036051 | 35.669 | 157 | 94 | 3 | 370 | 519 | 135 | 291 | 1.15e-24 | 104 |
Msa0672370 | MtrunA17_Chr4g0036051 | 40.860 | 93 | 53 | 1 | 6 | 98 | 3 | 93 | 1.58e-16 | 80.5 |
Msa0672370 | MtrunA17_Chr6g0479811 | 44.643 | 112 | 62 | 0 | 416 | 527 | 1 | 112 | 1.41e-24 | 98.6 |
Msa0672370 | MtrunA17_Chr3g0141761 | 42.574 | 101 | 58 | 0 | 190 | 290 | 391 | 491 | 2.81e-23 | 103 |
Msa0672370 | MtrunA17_Chr4g0077071 | 88.000 | 50 | 6 | 0 | 191 | 240 | 32 | 81 | 1.35e-22 | 92.0 |
Msa0672370 | MtrunA17_Chr4g0074531 | 50.000 | 100 | 50 | 0 | 191 | 290 | 383 | 482 | 2.65e-22 | 100 |
Msa0672370 | MtrunA17_Chr4g0035171 | 42.574 | 101 | 58 | 0 | 190 | 290 | 389 | 489 | 3.70e-21 | 97.1 |
Msa0672370 | MtrunA17_Chr4g0036311 | 43.810 | 105 | 55 | 4 | 2 | 102 | 5 | 109 | 8.60e-21 | 87.8 |
Msa0672370 | MtrunA17_Chr4g0036251 | 48.958 | 96 | 41 | 4 | 6 | 98 | 9 | 99 | 9.59e-21 | 87.4 |
Msa0672370 | MtrunA17_Chr4g0036291 | 45.192 | 104 | 53 | 4 | 2 | 101 | 5 | 108 | 1.53e-20 | 87.0 |
Msa0672370 | MtrunA17_Chr6g0454161 | 80.392 | 51 | 10 | 0 | 237 | 287 | 125 | 175 | 9.05e-19 | 87.8 |
Msa0672370 | MtrunA17_Chr5g0441571 | 40.517 | 116 | 63 | 2 | 97 | 207 | 136 | 250 | 5.53e-14 | 74.7 |
Msa0672370 | MtrunA17_Chr4g0033371 | 91.176 | 34 | 3 | 0 | 292 | 325 | 421 | 454 | 7.59e-13 | 70.9 |
Msa0672370 | MtrunA17_Chr5g0441651 | 38.793 | 116 | 65 | 2 | 97 | 207 | 144 | 258 | 3.81e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0672370 | AT5G62420.1 | 66.019 | 206 | 65 | 2 | 328 | 528 | 91 | 296 | 2.64e-92 | 285 |
Msa0672370 | AT5G62420.1 | 59.048 | 105 | 42 | 1 | 1 | 104 | 1 | 105 | 7.00e-36 | 136 |
Msa0672370 | AT1G59960.1 | 41.063 | 207 | 115 | 4 | 333 | 533 | 107 | 312 | 3.17e-49 | 173 |
Msa0672370 | AT1G59960.1 | 39.560 | 91 | 51 | 3 | 13 | 99 | 20 | 110 | 1.65e-12 | 69.3 |
Msa0672370 | AT5G48300.1 | 82.178 | 101 | 18 | 0 | 191 | 291 | 382 | 482 | 1.86e-47 | 173 |
Msa0672370 | AT2G37770.2 | 41.000 | 200 | 112 | 2 | 333 | 528 | 98 | 295 | 2.60e-47 | 167 |
Msa0672370 | AT2G37770.2 | 41.489 | 94 | 51 | 2 | 7 | 98 | 9 | 100 | 1.05e-13 | 72.8 |
Msa0672370 | AT2G37790.1 | 34.138 | 290 | 176 | 5 | 253 | 536 | 25 | 305 | 1.32e-45 | 163 |
Msa0672370 | AT2G37790.1 | 43.158 | 95 | 48 | 3 | 8 | 99 | 10 | 101 | 3.56e-14 | 73.9 |
Msa0672370 | AT3G53880.1 | 36.032 | 247 | 141 | 6 | 286 | 526 | 58 | 293 | 2.03e-43 | 157 |
Msa0672370 | AT3G53880.2 | 36.364 | 242 | 137 | 6 | 286 | 521 | 58 | 288 | 4.74e-42 | 153 |
Msa0672370 | AT1G59950.1 | 42.029 | 207 | 113 | 4 | 333 | 533 | 101 | 306 | 1.63e-41 | 152 |
Msa0672370 | AT2G37760.4 | 35.193 | 233 | 139 | 4 | 296 | 524 | 63 | 287 | 8.53e-41 | 149 |
Msa0672370 | AT2G37760.4 | 42.553 | 94 | 46 | 2 | 8 | 99 | 10 | 97 | 3.52e-16 | 79.7 |
Msa0672370 | AT2G37760.3 | 35.193 | 233 | 139 | 4 | 296 | 524 | 63 | 287 | 8.53e-41 | 149 |
Msa0672370 | AT2G37760.3 | 42.553 | 94 | 46 | 2 | 8 | 99 | 10 | 97 | 3.52e-16 | 79.7 |
Msa0672370 | AT2G37760.5 | 37.838 | 222 | 125 | 5 | 296 | 513 | 63 | 275 | 1.24e-40 | 149 |
Msa0672370 | AT2G37760.5 | 42.553 | 94 | 46 | 2 | 8 | 99 | 10 | 97 | 3.57e-16 | 79.7 |
Msa0672370 | AT2G37760.6 | 37.838 | 222 | 125 | 5 | 296 | 513 | 17 | 229 | 1.42e-40 | 148 |
Msa0672370 | AT2G37760.7 | 37.838 | 222 | 125 | 5 | 296 | 513 | 17 | 229 | 1.42e-40 | 148 |
Msa0672370 | AT2G37760.2 | 37.838 | 222 | 125 | 5 | 296 | 513 | 63 | 275 | 2.61e-40 | 149 |
Msa0672370 | AT2G37760.2 | 42.105 | 95 | 47 | 2 | 7 | 99 | 9 | 97 | 5.60e-16 | 79.3 |
Msa0672370 | AT2G37760.1 | 37.838 | 222 | 125 | 5 | 296 | 513 | 63 | 275 | 2.61e-40 | 149 |
Msa0672370 | AT2G37760.1 | 42.105 | 95 | 47 | 2 | 7 | 99 | 9 | 97 | 5.60e-16 | 79.3 |
Msa0672370 | AT5G01670.1 | 38.384 | 198 | 113 | 4 | 335 | 527 | 107 | 300 | 1.77e-38 | 144 |
Msa0672370 | AT5G01670.2 | 38.384 | 198 | 113 | 4 | 335 | 527 | 134 | 327 | 2.19e-38 | 144 |
Msa0672370 | AT2G21260.2 | 36.181 | 199 | 113 | 5 | 335 | 519 | 25 | 223 | 4.10e-33 | 127 |
Msa0672370 | AT2G21260.1 | 36.181 | 199 | 113 | 5 | 335 | 519 | 93 | 291 | 1.37e-32 | 127 |
Msa0672370 | AT2G21260.1 | 30.539 | 167 | 105 | 4 | 6 | 163 | 3 | 167 | 3.50e-16 | 80.1 |
Msa0672370 | AT2G21250.1 | 36.683 | 199 | 112 | 5 | 335 | 519 | 93 | 291 | 2.93e-32 | 126 |
Msa0672370 | AT2G21250.1 | 39.785 | 93 | 54 | 1 | 6 | 98 | 3 | 93 | 2.12e-16 | 80.5 |
Msa0672370 | AT1G27680.1 | 44.444 | 108 | 59 | 1 | 190 | 296 | 379 | 486 | 3.24e-24 | 106 |
Msa0672370 | AT5G19220.1 | 47.000 | 100 | 53 | 0 | 191 | 290 | 384 | 483 | 8.97e-23 | 102 |
Msa0672370 | AT2G21590.2 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.3 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.5 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.4 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.7 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.1 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT2G21590.6 | 42.000 | 100 | 58 | 0 | 191 | 290 | 385 | 484 | 1.65e-21 | 98.6 |
Msa0672370 | AT4G39210.2 | 44.000 | 100 | 56 | 0 | 191 | 290 | 383 | 482 | 1.29e-20 | 95.5 |
Msa0672370 | AT4G39210.1 | 44.000 | 100 | 56 | 0 | 191 | 290 | 383 | 482 | 1.29e-20 | 95.5 |
Msa0672370 | AT2G37770.1 | 40.367 | 109 | 59 | 2 | 333 | 437 | 98 | 204 | 2.49e-20 | 91.7 |
Msa0672370 | AT2G37770.1 | 41.489 | 94 | 51 | 2 | 7 | 98 | 9 | 100 | 7.86e-14 | 72.4 |
Msa0672370 | AT1G05610.1 | 48.039 | 102 | 51 | 1 | 191 | 290 | 336 | 437 | 4.43e-19 | 90.5 |
Msa0672370 | AT1G05610.2 | 48.039 | 102 | 51 | 1 | 191 | 290 | 342 | 443 | 5.05e-19 | 90.5 |
Msa0672370 | AT2G21250.2 | 34.752 | 141 | 78 | 5 | 335 | 461 | 93 | 233 | 2.15e-17 | 82.0 |
Msa0672370 | AT2G21250.2 | 39.785 | 93 | 54 | 1 | 6 | 98 | 3 | 93 | 9.65e-17 | 80.5 |
Find 114 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATATAGATTGCCTTATTTA+TGG | 0.094666 | 4_4:-17229212 | None:intergenic |
TGAAGATGACTTTGAAAATT+TGG | 0.094815 | 4_4:+17237888 | Msa0672370:CDS |
AAGGCAATTGATTGTATAAT+TGG | 0.200651 | 4_4:-17238557 | None:intergenic |
GAATCTGGACATGGAATATT+TGG | 0.203266 | 4_4:+17237804 | Msa0672370:CDS |
TCTGTTGTCTTCTTATCATT+TGG | 0.211759 | 4_4:-17228610 | None:intergenic |
CATAAATAAGGCAATCTATA+TGG | 0.224825 | 4_4:+17229213 | Msa0672370:CDS |
TGAAAGAATGGAGGAAAATA+TGG | 0.239865 | 4_4:+17238983 | Msa0672370:CDS |
CTGTTGTCTTCTTATCATTT+GGG | 0.296041 | 4_4:-17228609 | None:intergenic |
GGGCTGCATTCTTGCATATC+AGG | 0.296848 | 4_4:+17234665 | Msa0672370:CDS |
CACTATAAACAATCAGCTTT+CGG | 0.316396 | 4_4:-17239286 | None:intergenic |
CGGGGAAGGATGTGTGATTA+AGG | 0.317043 | 4_4:+17234498 | Msa0672370:CDS |
ACAATGCCTCTCATTGGATT+TGG | 0.330693 | 4_4:+17228574 | Msa0672370:CDS |
GAGGAAGAAACAAGAAGAAT+TGG | 0.332205 | 4_4:+17229985 | Msa0672370:CDS |
TGATATTTAATTACCTGTGC+TGG | 0.338494 | 4_4:-17238596 | None:intergenic |
TAATTGAAAGTATGGGGTTT+GGG | 0.345729 | 4_4:+17229952 | Msa0672370:intron |
ATTAGGCAATGCCATAAATA+AGG | 0.350442 | 4_4:+17229201 | Msa0672370:CDS |
ATGGGGTTTGGGTTTGCAAT+TGG | 0.350878 | 4_4:+17229963 | Msa0672370:CDS |
ATTTGAAGGTTGCATTGAAA+TGG | 0.361915 | 4_4:+17238916 | Msa0672370:intron |
TTAATTGAAAGTATGGGGTT+TGG | 0.364955 | 4_4:+17229951 | Msa0672370:intron |
GATGAACTCTTCACATTTGA+AGG | 0.374057 | 4_4:-17235606 | None:intergenic |
GATATCACTGATAGTGTTAT+CGG | 0.379793 | 4_4:+17234478 | Msa0672370:CDS |
TGGGGTTGCTTTGTGTTTGA+AGG | 0.388559 | 4_4:-17238576 | None:intergenic |
CGTCTATGTTTCTTAATCTC+AGG | 0.392267 | 4_4:+17230868 | Msa0672370:CDS |
GGCATTACAATGCCTCTCAT+TGG | 0.395160 | 4_4:+17228568 | Msa0672370:CDS |
GTTTGTTTCAATGCAGCAAC+AGG | 0.398249 | 4_4:-17229298 | None:intergenic |
GGCAGTGTTCCACTTGGTAT+TGG | 0.399314 | 4_4:+17234943 | Msa0672370:CDS |
TATTGAAGACACTTTGTTGA+TGG | 0.401901 | 4_4:+17234697 | Msa0672370:CDS |
GTTGACAAGAATGCTAGAAT+TGG | 0.404186 | 4_4:+17234994 | Msa0672370:CDS |
TTTGAAGGTTGCATTGAAAT+GGG | 0.414907 | 4_4:+17238917 | Msa0672370:intron |
GATATTTAATTACCTGTGCT+GGG | 0.417731 | 4_4:-17238595 | None:intergenic |
TACTCACCACTTGGTGGACC+AGG | 0.421010 | 4_4:+17238500 | Msa0672370:CDS |
AAGTCATCTTCATTAGGAAC+AGG | 0.433658 | 4_4:-17237877 | None:intergenic |
AAATCTTCCATTCAGTGGTT+GGG | 0.441064 | 4_4:+17234645 | Msa0672370:CDS |
ATAAATAAGGCAATCTATAT+GGG | 0.442614 | 4_4:+17229214 | Msa0672370:CDS |
TTTATGGCATTGCCTAATGC+TGG | 0.448486 | 4_4:-17229196 | None:intergenic |
GGGTTTGGGTTTGCAATTGG+AGG | 0.457079 | 4_4:+17229966 | Msa0672370:CDS |
TTATCCAAGTCGACATCGTT+GGG | 0.457199 | 4_4:-17235685 | None:intergenic |
TTGGTGGACCAGGGAATGCA+TGG | 0.463271 | 4_4:+17238510 | Msa0672370:CDS |
CAACGATGTCGACTTGGATA+AGG | 0.467770 | 4_4:+17235687 | Msa0672370:CDS |
ATATCACTGATAGTGTTATC+GGG | 0.469841 | 4_4:+17234479 | Msa0672370:CDS |
AAAATCTTCCATTCAGTGGT+TGG | 0.473513 | 4_4:+17234644 | Msa0672370:CDS |
TATGGCTCTGAGCCAGCATT+AGG | 0.474356 | 4_4:+17229184 | Msa0672370:CDS |
GTTGATCCCCATGCATTCCC+TGG | 0.477901 | 4_4:-17238518 | None:intergenic |
TTTCTTGACATCCAAATTGT+GGG | 0.481755 | 4_4:+17229258 | Msa0672370:CDS |
TTTAAGAAGCGCAAGTCTCT+TGG | 0.484148 | 4_4:+17230964 | Msa0672370:CDS |
GAAGAAACAAGAAGAATTGG+AGG | 0.484939 | 4_4:+17229988 | Msa0672370:CDS |
GCCTGTAAAGTTAAAACCAT+GGG | 0.488120 | 4_4:+17237846 | Msa0672370:CDS |
TGGATATGTACCTTGTGCAT+TGG | 0.492094 | 4_4:+17237824 | Msa0672370:CDS |
TCTATATGGGAGAAGTAGAA+AGG | 0.493846 | 4_4:+17229227 | Msa0672370:CDS |
AGTGTTCACATGAGAAGGCT+TGG | 0.497606 | 4_4:+17235635 | Msa0672370:CDS |
GAAAGAATGGAGGAAAATAT+GGG | 0.502628 | 4_4:+17238984 | Msa0672370:CDS |
CATTCCCAACGATGTCGACT+TGG | 0.506190 | 4_4:+17235681 | Msa0672370:CDS |
GGGATCATTTGATCTAAACT+TGG | 0.506454 | 4_4:+17239004 | Msa0672370:CDS |
GTCTTGAAATGGGGTTATGT+AGG | 0.513056 | 4_4:+17237944 | Msa0672370:CDS |
AAGTTTCAATGATGAAAGAA+TGG | 0.517652 | 4_4:+17238971 | Msa0672370:CDS |
ATTGAAGACACTTTGTTGAT+GGG | 0.519372 | 4_4:+17234698 | Msa0672370:CDS |
AATGCAGCCCAACCACTGAA+TGG | 0.520984 | 4_4:-17234652 | None:intergenic |
CTTATCCAAGTCGACATCGT+TGG | 0.524700 | 4_4:-17235686 | None:intergenic |
TGTCTTCTTATCATTTGGGT+AGG | 0.528221 | 4_4:-17228605 | None:intergenic |
ATGGGGTTATGTAGGTCCAT+TGG | 0.529847 | 4_4:+17237952 | Msa0672370:CDS |
CTATATGGGAGAAGTAGAAA+GGG | 0.533515 | 4_4:+17229228 | Msa0672370:CDS |
CAATGAGTGTTCACATGAGA+AGG | 0.534579 | 4_4:+17235630 | Msa0672370:CDS |
ATTTGGATCTTGAGACAACA+TGG | 0.540374 | 4_4:+17237905 | Msa0672370:CDS |
CAACATTGAAGATTATGAAG+AGG | 0.549840 | 4_4:+17230693 | Msa0672370:CDS |
AATCATGTGCGTTTGAATTG+TGG | 0.556437 | 4_4:+17228547 | Msa0672370:CDS |
TCAATGCAGCAACAGGATCA+TGG | 0.559666 | 4_4:-17229291 | None:intergenic |
TGGTGGACCAGGGAATGCAT+GGG | 0.560104 | 4_4:+17238511 | Msa0672370:CDS |
TTGAAATGGGGATTATCAAA+GGG | 0.560330 | 4_4:+17238930 | Msa0672370:CDS |
ATTGAAATGGGGATTATCAA+AGG | 0.560489 | 4_4:+17238929 | Msa0672370:CDS |
CTGCAAAATCTTCCATTCAG+TGG | 0.561130 | 4_4:+17234640 | Msa0672370:CDS |
GTCTCTTGGTGCCTTAGCGA+TGG | 0.562521 | 4_4:+17230978 | Msa0672370:CDS |
AAGAAATGAAGATTATGAGA+GGG | 0.564196 | 4_4:+17239060 | Msa0672370:CDS |
TTATGAAGAGGATTTGAAGC+CGG | 0.569826 | 4_4:+17230705 | Msa0672370:CDS |
TGAGACAACATGGGTAGGGA+TGG | 0.572572 | 4_4:+17237915 | Msa0672370:CDS |
CTGCATTCTTGCATATCAGG+AGG | 0.573281 | 4_4:+17234668 | Msa0672370:CDS |
ACTGATAGTGTTATCGGGGA+AGG | 0.575346 | 4_4:+17234484 | Msa0672370:CDS |
TTCTTGACATCCAAATTGTG+GGG | 0.578334 | 4_4:+17229259 | Msa0672370:CDS |
GGAACAGGATAGTTAACCCA+TGG | 0.578853 | 4_4:-17237862 | None:intergenic |
TGGTCCACCAAGTGGTGAGT+AGG | 0.583500 | 4_4:-17238498 | None:intergenic |
GATCTTGAGACAACATGGGT+AGG | 0.585515 | 4_4:+17237910 | Msa0672370:CDS |
ACACAAAGCAACCCCAGCAC+AGG | 0.586444 | 4_4:+17238583 | Msa0672370:CDS |
TTGAAGGTTGCATTGAAATG+GGG | 0.588735 | 4_4:+17238918 | Msa0672370:intron |
AATTAAGTTCAGAGGAGTAG+AGG | 0.591705 | 4_4:+17230657 | Msa0672370:CDS |
GAAGAAATGAAGATTATGAG+AGG | 0.591725 | 4_4:+17239059 | Msa0672370:CDS |
AGAGAAATTACTAACTCCAA+TGG | 0.591742 | 4_4:-17237968 | None:intergenic |
ATCTTGAGACAACATGGGTA+GGG | 0.592828 | 4_4:+17237911 | Msa0672370:CDS |
TGCAGTCCACAATGCCCTTG+AGG | 0.593505 | 4_4:+17228636 | Msa0672370:CDS |
TCTCTAGCAACAAGATTGAG+TGG | 0.593774 | 4_4:+17237986 | Msa0672370:CDS |
TTTCAATGATGAAAGAATGG+AGG | 0.594754 | 4_4:+17238974 | Msa0672370:CDS |
AGAGCTGCAATTAAGTTCAG+AGG | 0.598621 | 4_4:+17230649 | Msa0672370:CDS |
GGCCTGTAAAGTTAAAACCA+TGG | 0.600838 | 4_4:+17237845 | Msa0672370:CDS |
ATATTTAATTACCTGTGCTG+GGG | 0.601478 | 4_4:-17238594 | None:intergenic |
AGAAATGAAGATTATGAGAG+GGG | 0.602586 | 4_4:+17239061 | Msa0672370:CDS |
GCTAAAGGCAGTGTTCCACT+TGG | 0.607159 | 4_4:+17234937 | Msa0672370:CDS |
ACTTTACAGGCCAATGCACA+AGG | 0.616222 | 4_4:-17237834 | None:intergenic |
GTAAGTGCCTACTCACCACT+TGG | 0.619442 | 4_4:+17238491 | Msa0672370:CDS |
AGTGCCTACTCACCACTTGG+TGG | 0.619529 | 4_4:+17238494 | Msa0672370:CDS |
GCATCAAGCATCTTTGACAG+AGG | 0.620306 | 4_4:-17234454 | None:intergenic |
AGCTTTCTCTGCCTCCACAT+AGG | 0.620551 | 4_4:-17238437 | None:intergenic |
TCTTGACATCCAAATTGTGG+GGG | 0.621026 | 4_4:+17229260 | Msa0672370:CDS |
AGGTGGAAATGCATCCTATG+TGG | 0.626109 | 4_4:+17238423 | Msa0672370:intron |
AGAAAGCTGAGAAAGACATG+TGG | 0.633349 | 4_4:+17238452 | Msa0672370:CDS |
GATTAAGGTTAGTACCTCAA+GGG | 0.643115 | 4_4:-17228650 | None:intergenic |
TAGAATTGGAGAAAATGTGA+AGG | 0.647495 | 4_4:+17235008 | Msa0672370:CDS |
TAAGTGCCAAATCCAATGAG+AGG | 0.655261 | 4_4:-17228580 | None:intergenic |
TGGAAATGCATCCTATGTGG+AGG | 0.657202 | 4_4:+17238426 | Msa0672370:CDS |
GGTGGACCAGGGAATGCATG+GGG | 0.659494 | 4_4:+17238512 | Msa0672370:CDS |
GCATTCCCTGGTCCACCAAG+TGG | 0.660549 | 4_4:-17238506 | None:intergenic |
TTTGGATCTTGAGACAACAT+GGG | 0.665864 | 4_4:+17237906 | Msa0672370:CDS |
ACTCACCACTTGGTGGACCA+GGG | 0.670084 | 4_4:+17238501 | Msa0672370:CDS |
TATCACTGATAGTGTTATCG+GGG | 0.674328 | 4_4:+17234480 | Msa0672370:CDS |
TTAGTACCTCAAGGGCATTG+TGG | 0.678400 | 4_4:-17228642 | None:intergenic |
GAGTTTCTGCCAATACCAAG+TGG | 0.682922 | 4_4:-17234952 | None:intergenic |
GATGGGCGCATATTATTACG+AGG | 0.683765 | 4_4:+17234715 | Msa0672370:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTATATTAATTTAAAATACA+AGG | - | chr4_4:17229026-17229045 | None:intergenic | 10.0% |
!! | ATATTTAATATTTATGATGT+TGG | + | chr4_4:17231338-17231357 | Msa0672370:intron | 10.0% |
!!! | TGGAATTTTAAAAAAATATT+TGG | + | chr4_4:17232553-17232572 | Msa0672370:intron | 10.0% |
!!! | TTTCTTCTATATTATTTTAA+TGG | + | chr4_4:17233434-17233453 | Msa0672370:intron | 10.0% |
!!! | AATAAGTTTTATATTTGTTT+TGG | - | chr4_4:17235462-17235481 | None:intergenic | 10.0% |
!!! | TAAGTTTTTATAATCTAAAA+CGG | - | chr4_4:17236513-17236532 | None:intergenic | 10.0% |
!!! | TAATATTTTGATATATACTT+AGG | + | chr4_4:17238403-17238422 | Msa0672370:intron | 10.0% |
!!! | ATATATTTTATTTACTTGTT+TGG | - | chr4_4:17238669-17238688 | None:intergenic | 10.0% |
!! | TATATTTGTGTTCAATAATA+AGG | - | chr4_4:17229114-17229133 | None:intergenic | 15.0% |
!! | GATGAAAAAAATTAAGATAT+AGG | - | chr4_4:17229372-17229391 | None:intergenic | 15.0% |
!!! | TTCTTTTCACATATAATAAT+AGG | - | chr4_4:17229488-17229507 | None:intergenic | 15.0% |
!! | AAATTGAATGTATAAATTGT+AGG | + | chr4_4:17230377-17230396 | Msa0672370:intron | 15.0% |
!! | AATTGAATGTATAAATTGTA+GGG | + | chr4_4:17230378-17230397 | Msa0672370:intron | 15.0% |
!! | AAAAATATTCTCAACATTAA+AGG | - | chr4_4:17230470-17230489 | None:intergenic | 15.0% |
!!! | TAATGTTGAGAATATTTTTT+CGG | + | chr4_4:17230471-17230490 | Msa0672370:intron | 15.0% |
!!! | AAATTTCATTCATTCTTTTA+TGG | + | chr4_4:17230558-17230577 | Msa0672370:intron | 15.0% |
!! | AATAATTGATTGAAAACTAT+AGG | - | chr4_4:17230782-17230801 | None:intergenic | 15.0% |
!! | TAAAAAATTTACACTTTAGT+AGG | - | chr4_4:17231481-17231500 | None:intergenic | 15.0% |
!!! | GTATTGATTTATTTATTTCT+GGG | + | chr4_4:17231888-17231907 | Msa0672370:intron | 15.0% |
!! | AAAAAAATATTTGGTTGATT+TGG | + | chr4_4:17232562-17232581 | Msa0672370:intron | 15.0% |
!! | TTAATTCAATTATGTTATGA+TGG | + | chr4_4:17232977-17232996 | Msa0672370:intron | 15.0% |
!! | TATAATGAAAAAAATGAACT+TGG | + | chr4_4:17235541-17235560 | Msa0672370:intron | 15.0% |
!!! | ATCTAATATTGTTTTGTTAA+AGG | + | chr4_4:17235791-17235810 | Msa0672370:intron | 15.0% |
!!! | AATTAATTTGTCTTCAAATT+TGG | + | chr4_4:17236264-17236283 | Msa0672370:intron | 15.0% |
!!! | GACAATCTTTTATATATTTA+AGG | - | chr4_4:17236620-17236639 | None:intergenic | 15.0% |
!! | TACAAAATCAAAACAAATAA+CGG | + | chr4_4:17236792-17236811 | Msa0672370:intron | 15.0% |
!! | TAATTAAGTTACAAAATTCT+AGG | + | chr4_4:17237158-17237177 | Msa0672370:intron | 15.0% |
!! | AATCTCCTATAAAAATATTT+GGG | - | chr4_4:17237434-17237453 | None:intergenic | 15.0% |
!! | ATAAATCATAACACAATATT+TGG | - | chr4_4:17237580-17237599 | None:intergenic | 15.0% |
!!! | TATAAGAAAAATCCATTTTT+AGG | + | chr4_4:17238100-17238119 | Msa0672370:intron | 15.0% |
!! | TTATTAAATCAACCTAAAAA+TGG | - | chr4_4:17238115-17238134 | None:intergenic | 15.0% |
!! | TATCAAATTTATTTGAACAT+TGG | - | chr4_4:17238777-17238796 | None:intergenic | 15.0% |
!!! | TATATTTGAGATTGAAAAAT+TGG | + | chr4_4:17239037-17239056 | Msa0672370:CDS | 15.0% |
!! | ATGAATTATAATAGTGATTA+TGG | - | chr4_4:17239157-17239176 | None:intergenic | 15.0% |
!! | ATTCATAATTCATTTCAAAA+AGG | + | chr4_4:17239171-17239190 | Msa0672370:intron | 15.0% |
!! | TTCATAATTCATTTCAAAAA+GGG | + | chr4_4:17239172-17239191 | Msa0672370:intron | 15.0% |
!! | TTGAAATATTAATAGAGTCA+AGG | + | chr4_4:17228892-17228911 | Msa0672370:intron | 20.0% |
!! | AAAGATATAGATCAATTTGA+TGG | + | chr4_4:17228936-17228955 | Msa0672370:intron | 20.0% |
!! | TTTGATACAGCAAAAATTTA+TGG | + | chr4_4:17229166-17229185 | Msa0672370:CDS | 20.0% |
!! | ATAAATAAGGCAATCTATAT+GGG | + | chr4_4:17229214-17229233 | Msa0672370:CDS | 20.0% |
!! | AAAAAACAGAAAACAAAAGA+AGG | + | chr4_4:17229510-17229529 | Msa0672370:intron | 20.0% |
!! | AAAAACAGAAAACAAAAGAA+GGG | + | chr4_4:17229511-17229530 | Msa0672370:intron | 20.0% |
!! | TTCATTGAGAAATTGAAATT+GGG | - | chr4_4:17229884-17229903 | None:intergenic | 20.0% |
!! | AATTTCAATTTCTCAATGAA+GGG | + | chr4_4:17229884-17229903 | Msa0672370:intron | 20.0% |
!! | AATTAAGCTTTCTTTGAATA+AGG | - | chr4_4:17229937-17229956 | None:intergenic | 20.0% |
!!! | TGTAATTGTTTTATGATGAA+TGG | + | chr4_4:17230416-17230435 | Msa0672370:intron | 20.0% |
!!! | AATGTTGAGAATATTTTTTC+GGG | + | chr4_4:17230472-17230491 | Msa0672370:intron | 20.0% |
!! | CAATTCAAGATACAAAAAAA+AGG | - | chr4_4:17230806-17230825 | None:intergenic | 20.0% |
!!! | AATTTTAACTTCAATGTGAA+TGG | + | chr4_4:17231187-17231206 | Msa0672370:intron | 20.0% |
!! | ATCAATTGAAGTCAATAATT+TGG | - | chr4_4:17231520-17231539 | None:intergenic | 20.0% |
!!! | ATCTAAATTCTAAAGCATTA+TGG | - | chr4_4:17231683-17231702 | None:intergenic | 20.0% |
!!! | GTTATTGAAATTTTTGCAAA+TGG | + | chr4_4:17231866-17231885 | Msa0672370:intron | 20.0% |
!!! | GGTATTGATTTATTTATTTC+TGG | + | chr4_4:17231887-17231906 | Msa0672370:intron | 20.0% |
!! | TAAAATCTAATTGATACTGA+TGG | + | chr4_4:17232073-17232092 | Msa0672370:intron | 20.0% |
!!! | TTAACAGACTTTAATTTTTG+TGG | + | chr4_4:17232163-17232182 | Msa0672370:intron | 20.0% |
!! | CGAATTTGGAAAAAAAAATT+TGG | + | chr4_4:17232253-17232272 | Msa0672370:intron | 20.0% |
!!! | AGCTTTCTATTGATAATTTT+TGG | + | chr4_4:17232473-17232492 | Msa0672370:intron | 20.0% |
!!! | TATTGATAATTTTTGGTTTG+TGG | + | chr4_4:17232480-17232499 | Msa0672370:intron | 20.0% |
!!! | TTAGTTATTCTTTTGAGTTT+TGG | + | chr4_4:17232533-17232552 | Msa0672370:intron | 20.0% |
!!! | AAATTTTGTCTATTTTCCAA+TGG | - | chr4_4:17232754-17232773 | None:intergenic | 20.0% |
!! | AATGTTCATGTTGAAATATT+TGG | + | chr4_4:17233058-17233077 | Msa0672370:intron | 20.0% |
!! | TTCTATTCACATGTAAATAA+AGG | - | chr4_4:17233831-17233850 | None:intergenic | 20.0% |
!! | TTGTTCTTTATGTTATGTAA+TGG | - | chr4_4:17233858-17233877 | None:intergenic | 20.0% |
!! | TAAGAATTGATCAAAATAGA+AGG | + | chr4_4:17234211-17234230 | Msa0672370:intron | 20.0% |
!!! | ATGGATTAGAAAGTAAAATA+GGG | - | chr4_4:17235067-17235086 | None:intergenic | 20.0% |
!!! | ATATTTGTTTTGGATAATGA+TGG | - | chr4_4:17235452-17235471 | None:intergenic | 20.0% |
!!! | AATATTGTTTTGTTAAAGGA+TGG | + | chr4_4:17235795-17235814 | Msa0672370:intron | 20.0% |
!! | AATGTTTAAAGACAAATCTA+CGG | + | chr4_4:17235923-17235942 | Msa0672370:intron | 20.0% |
!! | ATTCATCAAAGATATAGAAT+AGG | - | chr4_4:17236392-17236411 | None:intergenic | 20.0% |
!! | ATTTAATGTTTAGTATCTGA+TGG | - | chr4_4:17236705-17236724 | None:intergenic | 20.0% |
!! | TGGGGAAAATAAAATTAATT+CGG | + | chr4_4:17237001-17237020 | Msa0672370:intron | 20.0% |
!! | TATTCTTATCAATTATCATC+AGG | + | chr4_4:17237366-17237385 | Msa0672370:intron | 20.0% |
!! | CAATCTCCTATAAAAATATT+TGG | - | chr4_4:17237435-17237454 | None:intergenic | 20.0% |
!!! | ATTAGAAAGGTTTTAAATCA+TGG | - | chr4_4:17237501-17237520 | None:intergenic | 20.0% |
!! | TTACAAAATATTATATCGGA+CGG | - | chr4_4:17237628-17237647 | None:intergenic | 20.0% |
!! | TAATCAGGTAATTAACTAAT+TGG | + | chr4_4:17238041-17238060 | Msa0672370:intron | 20.0% |
!! | ACTGAATGAAATAACTTATT+TGG | + | chr4_4:17238217-17238236 | Msa0672370:intron | 20.0% |
!! | CTGAATGAAATAACTTATTT+GGG | + | chr4_4:17238218-17238237 | Msa0672370:intron | 20.0% |
!!! | TATTTTGATATATACTTAGG+TGG | + | chr4_4:17238406-17238425 | Msa0672370:intron | 20.0% |
!!! | CAAGTTTAAGACTTTTTTTT+TGG | + | chr4_4:17238617-17238636 | Msa0672370:intron | 20.0% |
! | AACAAATGTGTATGTGATTA+AGG | - | chr4_4:17228668-17228687 | None:intergenic | 25.0% |
!!! | CTTTTTGTTTTTGTCAAAGA+CGG | - | chr4_4:17228828-17228847 | None:intergenic | 25.0% |
! | TTGTCAAAAGTTTCTCAATT+AGG | - | chr4_4:17228858-17228877 | None:intergenic | 25.0% |
! | ATATATGTATGTGTGTATAC+AGG | + | chr4_4:17229129-17229148 | Msa0672370:intron | 25.0% |
!!! | CATATAGATTGCCTTATTTA+TGG | - | chr4_4:17229215-17229234 | None:intergenic | 25.0% |
! | CATAAATAAGGCAATCTATA+TGG | + | chr4_4:17229213-17229232 | Msa0672370:CDS | 25.0% |
!!! | CATTTTGGTAAATTGGTAAT+TGG | + | chr4_4:17229452-17229471 | Msa0672370:intron | 25.0% |
! | TCACATATAATAATAGGCAA+GGG | - | chr4_4:17229482-17229501 | None:intergenic | 25.0% |
! | TTCACATATAATAATAGGCA+AGG | - | chr4_4:17229483-17229502 | None:intergenic | 25.0% |
! | AAAACAGAAAACAAAAGAAG+GGG | + | chr4_4:17229512-17229531 | Msa0672370:intron | 25.0% |
!!! | ATTTCCTTTGCTTCTAAAAT+CGG | - | chr4_4:17229787-17229806 | None:intergenic | 25.0% |
! | TTTAGAAGCAAAGGAAATTA+AGG | + | chr4_4:17229789-17229808 | Msa0672370:intron | 25.0% |
! | TCATTGAGAAATTGAAATTG+GGG | - | chr4_4:17229883-17229902 | None:intergenic | 25.0% |
! | CTTCATTGAGAAATTGAAAT+TGG | - | chr4_4:17229885-17229904 | None:intergenic | 25.0% |
! | CAATTTCAATTTCTCAATGA+AGG | + | chr4_4:17229883-17229902 | Msa0672370:intron | 25.0% |
! | AGAAAGCTTAATTGAAAGTA+TGG | + | chr4_4:17229944-17229963 | Msa0672370:intron | 25.0% |
!! | GAAAGCTTAATTGAAAGTAT+GGG | + | chr4_4:17229945-17229964 | Msa0672370:intron | 25.0% |
!! | AAAGCTTAATTGAAAGTATG+GGG | + | chr4_4:17229946-17229965 | Msa0672370:intron | 25.0% |
! | TGTAAATCATTTCTGTTTGA+TGG | + | chr4_4:17230029-17230048 | Msa0672370:intron | 25.0% |
! | TCTGTTTAAGAAGATACATA+GGG | + | chr4_4:17230078-17230097 | Msa0672370:intron | 25.0% |
! | AAATCAGATACAAAGGAAAA+TGG | - | chr4_4:17230165-17230184 | None:intergenic | 25.0% |
!! | ATTTTCCTTTGTATCTGATT+TGG | + | chr4_4:17230164-17230183 | Msa0672370:intron | 25.0% |
!! | TTTTACCAAATCAGATACAA+AGG | - | chr4_4:17230172-17230191 | None:intergenic | 25.0% |
!! | AAAAAGCTATTTCACAATAC+TGG | - | chr4_4:17230200-17230219 | None:intergenic | 25.0% |
! | TATGATAATTTCATCCCATA+AGG | + | chr4_4:17230330-17230349 | Msa0672370:intron | 25.0% |
! | TTACATAGAACATACCTTAT+GGG | - | chr4_4:17230347-17230366 | None:intergenic | 25.0% |
! | TTTACATAGAACATACCTTA+TGG | - | chr4_4:17230348-17230367 | None:intergenic | 25.0% |
!! | TCTGAAAATCAATTTGTTTC+AGG | + | chr4_4:17230439-17230458 | Msa0672370:intron | 25.0% |
!!! | ATGTTGAGAATATTTTTTCG+GGG | + | chr4_4:17230473-17230492 | Msa0672370:intron | 25.0% |
! | TGTTGTGATTTAAATGAGTT+TGG | + | chr4_4:17230824-17230843 | Msa0672370:intron | 25.0% |
! | TATATCGATGTAACAAAAAC+TGG | - | chr4_4:17231425-17231444 | None:intergenic | 25.0% |
! | TCAGAATACTTAAGTACAAA+AGG | + | chr4_4:17231446-17231465 | Msa0672370:intron | 25.0% |
!!! | TTATCTAGTTGATTTTTCTG+TGG | - | chr4_4:17231739-17231758 | None:intergenic | 25.0% |
! | AACTAGATAAATCTTTGATG+TGG | + | chr4_4:17231749-17231768 | Msa0672370:intron | 25.0% |
! | TAAATCTTTGATGTGGTATT+TGG | + | chr4_4:17231756-17231775 | Msa0672370:intron | 25.0% |
!!! | GATTTATTTATTTCTGGGAA+TGG | + | chr4_4:17231893-17231912 | Msa0672370:intron | 25.0% |
!!! | CTTTAATTTTTGTGGTTTTG+TGG | + | chr4_4:17232171-17232190 | Msa0672370:intron | 25.0% |
!! | TTTTTCCAAATTCGAAAACT+CGG | - | chr4_4:17232247-17232266 | None:intergenic | 25.0% |
! | CTAAAAACATACACAATCTA+AGG | - | chr4_4:17232424-17232443 | None:intergenic | 25.0% |
! | GACAAAATTTAACACGAAAT+AGG | + | chr4_4:17232764-17232783 | Msa0672370:intron | 25.0% |
! | AATTTCTGTCTTCTTTCTAA+TGG | - | chr4_4:17232932-17232951 | None:intergenic | 25.0% |
!! | GACAGAAATTAACTTGAAAT+AGG | + | chr4_4:17232942-17232961 | Msa0672370:intron | 25.0% |
!! | AATTAACTTGAAATAGGCTT+TGG | + | chr4_4:17232948-17232967 | Msa0672370:intron | 25.0% |
!! | ATTCAAAATTTTGTGATGCT+TGG | + | chr4_4:17233494-17233513 | Msa0672370:intron | 25.0% |
!! | ACATAAAGAACAAAAAGTGT+TGG | + | chr4_4:17233865-17233884 | Msa0672370:intron | 25.0% |
!! | GTCAATTTTTGAATCCTTTT+TGG | + | chr4_4:17234042-17234061 | Msa0672370:intron | 25.0% |
! | GTTGGTTAAATATACCAAAA+AGG | - | chr4_4:17234059-17234078 | None:intergenic | 25.0% |
!! | TCATTAGTGTGTATCATTTT+TGG | + | chr4_4:17234372-17234391 | Msa0672370:intron | 25.0% |
!!! | CATTAGTGTGTATCATTTTT+GGG | + | chr4_4:17234373-17234392 | Msa0672370:intron | 25.0% |
!!! | AGAAGCTGATAAAAGTTTTT+TGG | + | chr4_4:17234912-17234931 | Msa0672370:CDS | 25.0% |
!!! | GATGGATTAGAAAGTAAAAT+AGG | - | chr4_4:17235068-17235087 | None:intergenic | 25.0% |
! | TATTAAGCTTGACAAATTGT+TGG | + | chr4_4:17235094-17235113 | Msa0672370:intron | 25.0% |
! | ACTTAAAAAGACCAAAGATT+AGG | - | chr4_4:17235148-17235167 | None:intergenic | 25.0% |
! | ACACCTTCAATAAAAAATGT+CGG | - | chr4_4:17235273-17235292 | None:intergenic | 25.0% |
! | TTGTTAAAGCTATCTAAATC+TGG | - | chr4_4:17235486-17235505 | None:intergenic | 25.0% |
!!! | AGTAAGTTTTGAGGAATTTA+AGG | + | chr4_4:17235821-17235840 | Msa0672370:intron | 25.0% |
! | ATGTTTAAAGACAAATCTAC+GGG | + | chr4_4:17235924-17235943 | Msa0672370:intron | 25.0% |
!! | AATGACATTTTCGTAATAAG+TGG | + | chr4_4:17236298-17236317 | Msa0672370:intron | 25.0% |
!!! | TCTAAAACGGTACTAATTTT+GGG | - | chr4_4:17236500-17236519 | None:intergenic | 25.0% |
!!! | ATCTAAAACGGTACTAATTT+TGG | - | chr4_4:17236501-17236520 | None:intergenic | 25.0% |
! | CAAAAAGGGTAAAATCATTT+CGG | + | chr4_4:17236898-17236917 | Msa0672370:intron | 25.0% |
! | TCACTTGAAACCTTAAAATT+AGG | - | chr4_4:17236973-17236992 | None:intergenic | 25.0% |
!! | GTTTCAAGTGATAAAAAGTT+GGG | + | chr4_4:17236982-17237001 | Msa0672370:intron | 25.0% |
!! | TTTCAAGTGATAAAAAGTTG+GGG | + | chr4_4:17236983-17237002 | Msa0672370:intron | 25.0% |
! | GGGGAAAATAAAATTAATTC+GGG | + | chr4_4:17237002-17237021 | Msa0672370:intron | 25.0% |
! | GGGAAAATAAAATTAATTCG+GGG | + | chr4_4:17237003-17237022 | Msa0672370:intron | 25.0% |
! | TCACTTGAAACCTTAAAATT+AGG | - | chr4_4:17236973-17236992 | None:intergenic | 25.0% |
!! | GTTTCAAGTGATAAAAAGTT+GGG | + | chr4_4:17236982-17237001 | Msa0672370:intron | 25.0% |
!! | TTTCAAGTGATAAAAAGTTG+GGG | + | chr4_4:17236983-17237002 | Msa0672370:intron | 25.0% |
! | TTAAGTTACAAAATTCTAGG+TGG | + | chr4_4:17237161-17237180 | Msa0672370:intron | 25.0% |
!! | ACTGAAAATCTATTTTGTAG+TGG | + | chr4_4:17237261-17237280 | Msa0672370:intron | 25.0% |
!! | CTGAAAATCTATTTTGTAGT+GGG | + | chr4_4:17237262-17237281 | Msa0672370:intron | 25.0% |
!!! | CAACTCCCAAATATTTTTAT+AGG | + | chr4_4:17237426-17237445 | Msa0672370:intron | 25.0% |
! | TTTAGAGAATCACATTAGAA+AGG | - | chr4_4:17237514-17237533 | None:intergenic | 25.0% |
! | AATTGAAAGAATGTAACATG+TGG | + | chr4_4:17237717-17237736 | Msa0672370:intron | 25.0% |
!!! | GATTTTTTGAATGCAAAAAC+AGG | + | chr4_4:17237782-17237801 | Msa0672370:intron | 25.0% |
!! | TTTTCAAAGTCATCTTCATT+AGG | - | chr4_4:17237886-17237905 | None:intergenic | 25.0% |
!! | TGAAGATGACTTTGAAAATT+TGG | + | chr4_4:17237888-17237907 | Msa0672370:CDS | 25.0% |
! | ATGGAAAAATGTCTTGAAAT+GGG | + | chr4_4:17237934-17237953 | Msa0672370:CDS | 25.0% |
! | TTAATTACCTGATTAACAAC+TGG | - | chr4_4:17238036-17238055 | None:intergenic | 25.0% |
! | TAATTGGAATTTATCTTGAG+TGG | + | chr4_4:17238057-17238076 | Msa0672370:intron | 25.0% |
! | TCAAACTAATTTACTGATGT+TGG | - | chr4_4:17238317-17238336 | None:intergenic | 25.0% |
! | AAGGCAATTGATTGTATAAT+TGG | - | chr4_4:17238560-17238579 | None:intergenic | 25.0% |
! | TGTATCCTTAGTAAAATGAA+TGG | + | chr4_4:17238848-17238867 | Msa0672370:intron | 25.0% |
!! | CATTACCATTCATTTTACTA+AGG | - | chr4_4:17238856-17238875 | None:intergenic | 25.0% |
! | AAGTTTCAATGATGAAAGAA+TGG | + | chr4_4:17238971-17238990 | Msa0672370:CDS | 25.0% |
! | AAGAAATGAAGATTATGAGA+GGG | + | chr4_4:17239060-17239079 | Msa0672370:CDS | 25.0% |
!!! | AGTTCTTCAATTGTTTTGTA+GGG | - | chr4_4:17239113-17239132 | None:intergenic | 25.0% |
!!! | AAGTTCTTCAATTGTTTTGT+AGG | - | chr4_4:17239114-17239133 | None:intergenic | 25.0% |
! | ACAAAACAATTGAAGAACTT+TGG | + | chr4_4:17239114-17239133 | Msa0672370:intron | 25.0% |
! | CAAAACAATTGAAGAACTTT+GGG | + | chr4_4:17239115-17239134 | Msa0672370:intron | 25.0% |
CTGTTGTCTTCTTATCATTT+GGG | - | chr4_4:17228612-17228631 | None:intergenic | 30.0% | |
TCTGTTGTCTTCTTATCATT+TGG | - | chr4_4:17228613-17228632 | None:intergenic | 30.0% | |
TAGCGAGTAAACCATTAAAT+TGG | + | chr4_4:17228740-17228759 | Msa0672370:intron | 30.0% | |
CAAAGACAAGACCAATTTAA+TGG | - | chr4_4:17228754-17228773 | None:intergenic | 30.0% | |
CGTCTTTGACAAAAACAAAA+AGG | + | chr4_4:17228826-17228845 | Msa0672370:intron | 30.0% | |
TTTGACAAAAACAAAAAGGC+AGG | + | chr4_4:17228830-17228849 | Msa0672370:intron | 30.0% | |
TTGACAAAAACAAAAAGGCA+GGG | + | chr4_4:17228831-17228850 | Msa0672370:intron | 30.0% | |
ATTAGGCAATGCCATAAATA+AGG | + | chr4_4:17229201-17229220 | Msa0672370:CDS | 30.0% | |
! | TTTTCTTGACATCCAAATTG+TGG | + | chr4_4:17229257-17229276 | Msa0672370:CDS | 30.0% |
TTTCTTGACATCCAAATTGT+GGG | + | chr4_4:17229258-17229277 | Msa0672370:CDS | 30.0% | |
CACATATAATAATAGGCAAG+GGG | - | chr4_4:17229481-17229500 | None:intergenic | 30.0% | |
AAACAGAAAACAAAAGAAGG+GGG | + | chr4_4:17229513-17229532 | Msa0672370:intron | 30.0% | |
AAATTGCATGTCGTTAGAAA+AGG | + | chr4_4:17229591-17229610 | Msa0672370:intron | 30.0% | |
AATTGCATGTCGTTAGAAAA+GGG | + | chr4_4:17229592-17229611 | Msa0672370:intron | 30.0% | |
! | TTAATTGAAAGTATGGGGTT+TGG | + | chr4_4:17229951-17229970 | Msa0672370:intron | 30.0% |
! | TAATTGAAAGTATGGGGTTT+GGG | + | chr4_4:17229952-17229971 | Msa0672370:intron | 30.0% |
GTCTGTTTAAGAAGATACAT+AGG | + | chr4_4:17230077-17230096 | Msa0672370:intron | 30.0% | |
ATGGTTGAATTTGATCTGAA+TGG | + | chr4_4:17230103-17230122 | Msa0672370:intron | 30.0% | |
!!! | TGTTGAGAATATTTTTTCGG+GGG | + | chr4_4:17230474-17230493 | Msa0672370:intron | 30.0% |
CAACATTGAAGATTATGAAG+AGG | + | chr4_4:17230693-17230712 | Msa0672370:CDS | 30.0% | |
TGTGATTTAAATGAGTTTGG+AGG | + | chr4_4:17230827-17230846 | Msa0672370:intron | 30.0% | |
AGTTTGGAGGAATTTATTTC+AGG | + | chr4_4:17230840-17230859 | Msa0672370:intron | 30.0% | |
!!! | CAACTCTTTCAAGTTTTTCA+TGG | + | chr4_4:17230894-17230913 | Msa0672370:CDS | 30.0% |
! | AAGTTTTTCATGGCATACAA+AGG | + | chr4_4:17230904-17230923 | Msa0672370:CDS | 30.0% |
!!! | GGCATACAAAGGATTTTTTA+TGG | + | chr4_4:17230915-17230934 | Msa0672370:CDS | 30.0% |
!! | TAGTTCTGATTATTGTGATC+TGG | + | chr4_4:17231067-17231086 | Msa0672370:intron | 30.0% |
!!! | CATCTTTTTTCTCTTCTGTT+TGG | + | chr4_4:17231614-17231633 | Msa0672370:intron | 30.0% |
GGTCTATGATGGTTAAAATT+TGG | + | chr4_4:17231839-17231858 | Msa0672370:intron | 30.0% | |
AACCATCATACACATAAGAA+AGG | - | chr4_4:17231935-17231954 | None:intergenic | 30.0% | |
TGTGTATGATGGTTCAAATT+TGG | + | chr4_4:17231941-17231960 | Msa0672370:intron | 30.0% | |
! | GTGACATTGTAACTTTTGTA+AGG | - | chr4_4:17232110-17232129 | None:intergenic | 30.0% |
!!! | TGGTTTTGTGGTTAATGTTA+AGG | + | chr4_4:17232183-17232202 | Msa0672370:intron | 30.0% |
!!! | TGTTTTTAGTGAGTTGTGTA+TGG | + | chr4_4:17232435-17232454 | Msa0672370:intron | 30.0% |
TCAATAGAAAGCTTGAACAA+AGG | - | chr4_4:17232466-17232485 | None:intergenic | 30.0% | |
!!! | TGATAATTTTTGGTTTGTGG+TGG | + | chr4_4:17232483-17232502 | Msa0672370:intron | 30.0% |
! | TGGTTGTGTGATTTTGTTAA+AGG | + | chr4_4:17232582-17232601 | Msa0672370:intron | 30.0% |
TACAAACCAATTGATAGAGA+AGG | + | chr4_4:17232613-17232632 | Msa0672370:intron | 30.0% | |
ACAAATCCTTCTCTATCAAT+TGG | - | chr4_4:17232622-17232641 | None:intergenic | 30.0% | |
! | TTGATAGAGAAGGATTTGTT+TGG | + | chr4_4:17232623-17232642 | Msa0672370:intron | 30.0% |
!! | GGTGGAATTTTAAGAAATGT+TGG | + | chr4_4:17232650-17232669 | Msa0672370:intron | 30.0% |
TAGACCTACTGTTAGAAAAA+TGG | + | chr4_4:17232685-17232704 | Msa0672370:intron | 30.0% | |
!! | ATGACCATTTTTCTAACAGT+AGG | - | chr4_4:17232692-17232711 | None:intergenic | 30.0% |
TTGAGTGAAAATTGAACCAT+TGG | + | chr4_4:17232735-17232754 | Msa0672370:intron | 30.0% | |
GTAAAAATCTGAACTGTTGT+TGG | + | chr4_4:17232854-17232873 | Msa0672370:intron | 30.0% | |
TTCATACATCAGTTTGCAAT+AGG | + | chr4_4:17232899-17232918 | Msa0672370:intron | 30.0% | |
AAAATCTGCTCTAATGTAGT+TGG | + | chr4_4:17233035-17233054 | Msa0672370:intron | 30.0% | |
! | TCATAAACACATTTTACCCA+AGG | - | chr4_4:17233263-17233282 | None:intergenic | 30.0% |
!!! | GGCTTGCAATTTTTTCTTAT+TGG | + | chr4_4:17233540-17233559 | Msa0672370:intron | 30.0% |
!!! | TATGTTTGTTGTAGCACTTT+TGG | + | chr4_4:17233616-17233635 | Msa0672370:intron | 30.0% |
!!! | ATGTTTGTTGTAGCACTTTT+GGG | + | chr4_4:17233617-17233636 | Msa0672370:intron | 30.0% |
!! | CACATGTAAATAAAGGTGTT+TGG | - | chr4_4:17233824-17233843 | None:intergenic | 30.0% |
!! | GAAAGTGTTTCTTCAATTCA+TGG | + | chr4_4:17233929-17233948 | Msa0672370:intron | 30.0% |
TGGTACTAATGTGCATTTAA+AGG | - | chr4_4:17233984-17234003 | None:intergenic | 30.0% | |
TAAGTCTACTTCAATTGAGA+GGG | - | chr4_4:17234012-17234031 | None:intergenic | 30.0% | |
ATAAGTCTACTTCAATTGAG+AGG | - | chr4_4:17234013-17234032 | None:intergenic | 30.0% | |
!!! | AGTCATGATTGTGCTATTTT+TGG | + | chr4_4:17234349-17234368 | Msa0672370:intron | 30.0% |
! | GATATCACTGATAGTGTTAT+CGG | + | chr4_4:17234478-17234497 | Msa0672370:CDS | 30.0% |
! | ATATCACTGATAGTGTTATC+GGG | + | chr4_4:17234479-17234498 | Msa0672370:CDS | 30.0% |
TATTGAAGACACTTTGTTGA+TGG | + | chr4_4:17234697-17234716 | Msa0672370:CDS | 30.0% | |
ATTGAAGACACTTTGTTGAT+GGG | + | chr4_4:17234698-17234717 | Msa0672370:CDS | 30.0% | |
AGAAAATCAATGTTGCAGTT+AGG | - | chr4_4:17234881-17234900 | None:intergenic | 30.0% | |
!!! | AAAAGTTTTTTGGCTGCTAA+AGG | + | chr4_4:17234922-17234941 | Msa0672370:CDS | 30.0% |
! | AACAATTGCTCTTTTGATAC+GGG | - | chr4_4:17234977-17234996 | None:intergenic | 30.0% |
! | CAACAATTGCTCTTTTGATA+CGG | - | chr4_4:17234978-17234997 | None:intergenic | 30.0% |
TAGAATTGGAGAAAATGTGA+AGG | + | chr4_4:17235008-17235027 | Msa0672370:CDS | 30.0% | |
! | GGAATGAAAGTGTATATAGT+TGG | - | chr4_4:17235046-17235065 | None:intergenic | 30.0% |
TCAAGCTTAATATGAGAAGA+TGG | - | chr4_4:17235086-17235105 | None:intergenic | 30.0% | |
!!! | TTTTTTATTGAAGGTGTGTC+TGG | + | chr4_4:17235276-17235295 | Msa0672370:intron | 30.0% |
TCGCAGTTTATTATTAGTGT+TGG | + | chr4_4:17235343-17235362 | Msa0672370:intron | 30.0% | |
GAAGGAAATCAGGTTATATT+CGG | - | chr4_4:17235407-17235426 | None:intergenic | 30.0% | |
TATAACCTGATTTCCTTCAT+AGG | + | chr4_4:17235409-17235428 | Msa0672370:intron | 30.0% | |
! | GGTTATTAATTGATGACAAC+AGG | + | chr4_4:17235562-17235581 | Msa0672370:intron | 30.0% |
ACTGAATTTCAAATTGCATG+TGG | + | chr4_4:17235972-17235991 | Msa0672370:intron | 30.0% | |
CTGAATTTCAAATTGCATGT+GGG | + | chr4_4:17235973-17235992 | Msa0672370:intron | 30.0% | |
TGAATTTCAAATTGCATGTG+GGG | + | chr4_4:17235974-17235993 | Msa0672370:intron | 30.0% | |
TATGATATGTACTCAGAACT+TGG | - | chr4_4:17236007-17236026 | None:intergenic | 30.0% | |
! | GAGAGTGTAAATGGAAAAAT+AGG | + | chr4_4:17236111-17236130 | Msa0672370:intron | 30.0% |
AGAATAGGTGAAGTGTATAA+AGG | - | chr4_4:17236377-17236396 | None:intergenic | 30.0% | |
TTCTCCAACTATCTACAAAT+TGG | + | chr4_4:17236860-17236879 | Msa0672370:intron | 30.0% | |
CAAACCAATTTGTAGATAGT+TGG | - | chr4_4:17236867-17236886 | None:intergenic | 30.0% | |
! | GTTGTTGTCACCTAATTTTA+AGG | + | chr4_4:17236960-17236979 | Msa0672370:intron | 30.0% |
! | GGTTTCAAGTGATAAAAAGT+TGG | + | chr4_4:17236981-17237000 | Msa0672370:intron | 30.0% |
! | ATCTCAGTCACCTAATTTTA+AGG | + | chr4_4:17237102-17237121 | Msa0672370:intron | 30.0% |
! | GGTTTCAAGTGATAAAAAGT+TGG | + | chr4_4:17236981-17237000 | Msa0672370:intron | 30.0% |
ATTTGGGAGTTGACTAATTA+AGG | - | chr4_4:17237418-17237437 | None:intergenic | 30.0% | |
GATTGACGATACTATAAACT+TGG | + | chr4_4:17237543-17237562 | Msa0672370:intron | 30.0% | |
ATAAGCAATGCAAAAACATG+TGG | + | chr4_4:17237747-17237766 | Msa0672370:intron | 30.0% | |
GATGGAAAAATGTCTTGAAA+TGG | + | chr4_4:17237933-17237952 | Msa0672370:CDS | 30.0% | |
TGGAAAAATGTCTTGAAATG+GGG | + | chr4_4:17237935-17237954 | Msa0672370:CDS | 30.0% | |
AGAGAAATTACTAACTCCAA+TGG | - | chr4_4:17237971-17237990 | None:intergenic | 30.0% | |
ATTTACTGATGTTGGTATCA+AGG | - | chr4_4:17238309-17238328 | None:intergenic | 30.0% | |
ATATTTAATTACCTGTGCTG+GGG | - | chr4_4:17238597-17238616 | None:intergenic | 30.0% | |
GATATTTAATTACCTGTGCT+GGG | - | chr4_4:17238598-17238617 | None:intergenic | 30.0% | |
TGATATTTAATTACCTGTGC+TGG | - | chr4_4:17238599-17238618 | None:intergenic | 30.0% | |
GGATACAAATGCAACTAATT+TGG | - | chr4_4:17238835-17238854 | None:intergenic | 30.0% | |
!! | GACTATGATCTTTGATTTGA+AGG | + | chr4_4:17238902-17238921 | Msa0672370:intron | 30.0% |
ATTTGAAGGTTGCATTGAAA+TGG | + | chr4_4:17238916-17238935 | Msa0672370:intron | 30.0% | |
TTTGAAGGTTGCATTGAAAT+GGG | + | chr4_4:17238917-17238936 | Msa0672370:intron | 30.0% | |
ATTGAAATGGGGATTATCAA+AGG | + | chr4_4:17238929-17238948 | Msa0672370:CDS | 30.0% | |
TTGAAATGGGGATTATCAAA+GGG | + | chr4_4:17238930-17238949 | Msa0672370:CDS | 30.0% | |
TTTCAATGATGAAAGAATGG+AGG | + | chr4_4:17238974-17238993 | Msa0672370:CDS | 30.0% | |
TGAAAGAATGGAGGAAAATA+TGG | + | chr4_4:17238983-17239002 | Msa0672370:CDS | 30.0% | |
GAAAGAATGGAGGAAAATAT+GGG | + | chr4_4:17238984-17239003 | Msa0672370:CDS | 30.0% | |
GAAGAAATGAAGATTATGAG+AGG | + | chr4_4:17239059-17239078 | Msa0672370:CDS | 30.0% | |
AGAAATGAAGATTATGAGAG+GGG | + | chr4_4:17239061-17239080 | Msa0672370:CDS | 30.0% | |
AATCATGTGCGTTTGAATTG+TGG | + | chr4_4:17228547-17228566 | Msa0672370:CDS | 35.0% | |
TGTCTTCTTATCATTTGGGT+AGG | - | chr4_4:17228608-17228627 | None:intergenic | 35.0% | |
GATTAAGGTTAGTACCTCAA+GGG | - | chr4_4:17228653-17228672 | None:intergenic | 35.0% | |
TGATTAAGGTTAGTACCTCA+AGG | - | chr4_4:17228654-17228673 | None:intergenic | 35.0% | |
TATGTATGTGTGTATACAGG+TGG | + | chr4_4:17229132-17229151 | Msa0672370:intron | 35.0% | |
ATGTATGTGTGTATACAGGT+GGG | + | chr4_4:17229133-17229152 | Msa0672370:intron | 35.0% | |
TCTATATGGGAGAAGTAGAA+AGG | + | chr4_4:17229227-17229246 | Msa0672370:CDS | 35.0% | |
CTATATGGGAGAAGTAGAAA+GGG | + | chr4_4:17229228-17229247 | Msa0672370:CDS | 35.0% | |
TTCTTGACATCCAAATTGTG+GGG | + | chr4_4:17229259-17229278 | Msa0672370:CDS | 35.0% | |
GATAAGAAAATGAATGTCCG+TGG | + | chr4_4:17229402-17229421 | Msa0672370:intron | 35.0% | |
AGAAGAGAGAAGAGAGAAAA+GGG | + | chr4_4:17229617-17229636 | Msa0672370:intron | 35.0% | |
ATTGAAATTGGGGCTGAAAA+GGG | - | chr4_4:17229873-17229892 | None:intergenic | 35.0% | |
AATTGAAATTGGGGCTGAAA+AGG | - | chr4_4:17229874-17229893 | None:intergenic | 35.0% | |
GAGGAAGAAACAAGAAGAAT+TGG | + | chr4_4:17229985-17230004 | Msa0672370:CDS | 35.0% | |
GAAGAAACAAGAAGAATTGG+AGG | + | chr4_4:17229988-17230007 | Msa0672370:CDS | 35.0% | |
TAAGAAGATACATAGGGACA+TGG | + | chr4_4:17230084-17230103 | Msa0672370:intron | 35.0% | |
AATTAAGTTCAGAGGAGTAG+AGG | + | chr4_4:17230657-17230676 | Msa0672370:CDS | 35.0% | |
! | TTATGAAGAGGATTTGAAGC+CGG | + | chr4_4:17230705-17230724 | Msa0672370:CDS | 35.0% |
CGTCTATGTTTCTTAATCTC+AGG | + | chr4_4:17230868-17230887 | Msa0672370:CDS | 35.0% | |
AAAAAACCTTACCATCGCTA+AGG | - | chr4_4:17230992-17231011 | None:intergenic | 35.0% | |
! | CAAGTTTCAGTATTTTCGCA+TGG | + | chr4_4:17231270-17231289 | Msa0672370:intron | 35.0% |
CGCATGGAGTATAAGAAAAT+TGG | + | chr4_4:17231286-17231305 | Msa0672370:intron | 35.0% | |
GCTTTGCTTATTATGCATTC+AGG | + | chr4_4:17231376-17231395 | Msa0672370:intron | 35.0% | |
TTACACTTTAGTAGGAGATG+AGG | - | chr4_4:17231473-17231492 | None:intergenic | 35.0% | |
TGCCTTTCTTATGTGTATGA+TGG | + | chr4_4:17231930-17231949 | Msa0672370:intron | 35.0% | |
TGTTGTTGAAAGCTTTGCTT+TGG | + | chr4_4:17231967-17231986 | Msa0672370:intron | 35.0% | |
! | TTCAACCGAGTTTTCGAATT+TGG | + | chr4_4:17232239-17232258 | Msa0672370:intron | 35.0% |
!!! | TGTGTGTAGAAGTACTTTTC+TGG | + | chr4_4:17232314-17232333 | Msa0672370:intron | 35.0% |
GAGCATATTGTTGATCTGAA+AGG | + | chr4_4:17232396-17232415 | Msa0672370:intron | 35.0% | |
!!! | TAATTTTTGGTTTGTGGTGG+AGG | + | chr4_4:17232486-17232505 | Msa0672370:intron | 35.0% |
! | GAGAAGGATTTGTTTGGTTA+TGG | + | chr4_4:17232629-17232648 | Msa0672370:intron | 35.0% |
! | AAGGATTTGTTTGGTTATGG+TGG | + | chr4_4:17232632-17232651 | Msa0672370:intron | 35.0% |
ATTTAACACGAAATAGGCTC+TGG | + | chr4_4:17232770-17232789 | Msa0672370:intron | 35.0% | |
! | AATCCTTGTCATTTCAATCC+GGG | - | chr4_4:17233091-17233110 | None:intergenic | 35.0% |
! | CAATCCTTGTCATTTCAATC+CGG | - | chr4_4:17233092-17233111 | None:intergenic | 35.0% |
! | AGAGTGTTCAGAATAAGTCA+TGG | + | chr4_4:17233210-17233229 | Msa0672370:intron | 35.0% |
! | AACACATTTTACCCAAGGTA+AGG | - | chr4_4:17233258-17233277 | None:intergenic | 35.0% |
AACGAAGAACAACATAGAGA+TGG | - | chr4_4:17233646-17233665 | None:intergenic | 35.0% | |
ATGCTAGAACTGATGATTCA+TGG | - | chr4_4:17233676-17233695 | None:intergenic | 35.0% | |
! | ATGAATCATCAGTTCTAGCA+TGG | + | chr4_4:17233675-17233694 | Msa0672370:intron | 35.0% |
ACATAGTTGCAAAACTCCAA+GGG | - | chr4_4:17233751-17233770 | None:intergenic | 35.0% | |
AACATAGTTGCAAAACTCCA+AGG | - | chr4_4:17233752-17233771 | None:intergenic | 35.0% | |
!! | AAGAACAAAAAGTGTTGGTC+AGG | + | chr4_4:17233870-17233889 | Msa0672370:intron | 35.0% |
CTCACATGAAAGCTAACAAT+TGG | + | chr4_4:17234081-17234100 | Msa0672370:intron | 35.0% | |
TATCGCAGTTGAGTCTAAAT+TGG | - | chr4_4:17234430-17234449 | None:intergenic | 35.0% | |
! | TATCACTGATAGTGTTATCG+GGG | + | chr4_4:17234480-17234499 | Msa0672370:CDS | 35.0% |
! | ATGGAAGATTTTGCAGTTCT+AGG | - | chr4_4:17234636-17234655 | None:intergenic | 35.0% |
AAAATCTTCCATTCAGTGGT+TGG | + | chr4_4:17234644-17234663 | Msa0672370:CDS | 35.0% | |
AAATCTTCCATTCAGTGGTT+GGG | + | chr4_4:17234645-17234664 | Msa0672370:CDS | 35.0% | |
ATGCAGCTCAATTCATTCAT+TGG | + | chr4_4:17234830-17234849 | Msa0672370:intron | 35.0% | |
!! | ATTGGCTTGTGTAAGTTACA+AGG | + | chr4_4:17234848-17234867 | Msa0672370:intron | 35.0% |
GTTGACAAGAATGCTAGAAT+TGG | + | chr4_4:17234994-17235013 | Msa0672370:CDS | 35.0% | |
AAACATAGATTGCCTTCTTG+CGG | + | chr4_4:17235199-17235218 | Msa0672370:intron | 35.0% | |
!!! | GCACCGACATTTTTTATTGA+AGG | + | chr4_4:17235267-17235286 | Msa0672370:intron | 35.0% |
TTTCCTTCATAGGAAAGCTT+TGG | + | chr4_4:17235419-17235438 | Msa0672370:intron | 35.0% | |
GATGAACTCTTCACATTTGA+AGG | - | chr4_4:17235609-17235628 | None:intergenic | 35.0% | |
GAATTTCAAATTGCATGTGG+GGG | + | chr4_4:17235975-17235994 | Msa0672370:intron | 35.0% | |
! | GTACAGTTTGAGAGTGTAAA+TGG | + | chr4_4:17236102-17236121 | Msa0672370:intron | 35.0% |
! | TTCCTTCATTTGTTGCAAAG+TGG | + | chr4_4:17236335-17236354 | Msa0672370:intron | 35.0% |
CGATTGCTCGATTTATAATC+AGG | - | chr4_4:17236452-17236471 | None:intergenic | 35.0% | |
! | AAAACGGTACTAATTTTGGG+AGG | - | chr4_4:17236497-17236516 | None:intergenic | 35.0% |
!! | TCTACAAATTGGTTTGCTTG+CGG | + | chr4_4:17236871-17236890 | Msa0672370:intron | 35.0% |
GAACTCTTTGCAACATTCAA+TGG | + | chr4_4:17237191-17237210 | Msa0672370:intron | 35.0% | |
TAGTGGGAAAATGTATAAGC+CGG | + | chr4_4:17237278-17237297 | Msa0672370:intron | 35.0% | |
CCTGAGAAATTGCAAATATG+CGG | - | chr4_4:17237311-17237330 | None:intergenic | 35.0% | |
GTGATTCTCTAAACTCAACA+TGG | + | chr4_4:17237521-17237540 | Msa0672370:intron | 35.0% | |
TGAATGCAAAAACAGGAATC+TGG | + | chr4_4:17237789-17237808 | Msa0672370:intron | 35.0% | |
GAATCTGGACATGGAATATT+TGG | + | chr4_4:17237804-17237823 | Msa0672370:CDS | 35.0% | |
GCCTGTAAAGTTAAAACCAT+GGG | + | chr4_4:17237846-17237865 | Msa0672370:CDS | 35.0% | |
!!! | ACCCATGGTTTTAACTTTAC+AGG | - | chr4_4:17237850-17237869 | None:intergenic | 35.0% |
AAGTCATCTTCATTAGGAAC+AGG | - | chr4_4:17237880-17237899 | None:intergenic | 35.0% | |
ATTTGGATCTTGAGACAACA+TGG | + | chr4_4:17237905-17237924 | Msa0672370:CDS | 35.0% | |
TTTGGATCTTGAGACAACAT+GGG | + | chr4_4:17237906-17237925 | Msa0672370:CDS | 35.0% | |
ATTACCTGATTAACAACTGG+AGG | - | chr4_4:17238033-17238052 | None:intergenic | 35.0% | |
TTGAAGGTTGCATTGAAATG+GGG | + | chr4_4:17238918-17238937 | Msa0672370:intron | 35.0% | |
GGGATCATTTGATCTAAACT+TGG | + | chr4_4:17239004-17239023 | Msa0672370:CDS | 35.0% | |
!! | AATTGTTTTGTAGGGACTTG+TGG | - | chr4_4:17239105-17239124 | None:intergenic | 35.0% |
! | GTTATGTCTTTTCTATGACC+AGG | + | chr4_4:17239237-17239256 | Msa0672370:intron | 35.0% |
AGTTGAGTTTAGAAGAATCC+TGG | - | chr4_4:17239258-17239277 | None:intergenic | 35.0% | |
ACAATGCCTCTCATTGGATT+TGG | + | chr4_4:17228574-17228593 | Msa0672370:CDS | 40.0% | |
TAAGTGCCAAATCCAATGAG+AGG | - | chr4_4:17228583-17228602 | None:intergenic | 40.0% | |
TTTATGGCATTGCCTAATGC+TGG | - | chr4_4:17229199-17229218 | None:intergenic | 40.0% | |
TCTTGACATCCAAATTGTGG+GGG | + | chr4_4:17229260-17229279 | Msa0672370:CDS | 40.0% | |
GTTTGTTTCAATGCAGCAAC+AGG | - | chr4_4:17229301-17229320 | None:intergenic | 40.0% | |
GGGCAAAAAGGTAATTTCCA+CGG | - | chr4_4:17229422-17229441 | None:intergenic | 40.0% | |
! | ATTACCTTTTTGCCCTTCTG+AGG | + | chr4_4:17229427-17229446 | Msa0672370:intron | 40.0% |
! | TTACCTTTTTGCCCTTCTGA+GGG | + | chr4_4:17229428-17229447 | Msa0672370:intron | 40.0% |
!!! | TGAGGGGCATTTTGGTAAAT+TGG | + | chr4_4:17229445-17229464 | Msa0672370:intron | 40.0% |
GAGAAGAGAGAAGAGAGAAA+AGG | + | chr4_4:17229616-17229635 | Msa0672370:intron | 40.0% | |
!!! | TGCACCGATTTTAGAAGCAA+AGG | + | chr4_4:17229780-17229799 | Msa0672370:intron | 40.0% |
GAATTTGATCTGAATGGTGC+TGG | + | chr4_4:17230109-17230128 | Msa0672370:intron | 40.0% | |
AGAGCTGCAATTAAGTTCAG+AGG | + | chr4_4:17230649-17230668 | Msa0672370:CDS | 40.0% | |
! | ATTTGAAGCCGGTGAGTTAT+GGG | + | chr4_4:17230716-17230735 | Msa0672370:intron | 40.0% |
TATTCTTCCCCATAACTCAC+CGG | - | chr4_4:17230727-17230746 | None:intergenic | 40.0% | |
! | TTTAAGAAGCGCAAGTCTCT+TGG | + | chr4_4:17230964-17230983 | Msa0672370:CDS | 40.0% |
! | TGATGTTGGCTACTTTGTGA+TGG | + | chr4_4:17231352-17231371 | Msa0672370:intron | 40.0% |
ATTCAGGTGTCTTTCTTGCT+GGG | + | chr4_4:17231392-17231411 | Msa0672370:intron | 40.0% | |
!! | TGGCTGTTTCTTCTTGTGAT+TGG | + | chr4_4:17231634-17231653 | Msa0672370:intron | 40.0% |
ACCATCATAGACCAGTCATT+GGG | - | chr4_4:17231832-17231851 | None:intergenic | 40.0% | |
AACCATCATAGACCAGTCAT+TGG | - | chr4_4:17231833-17231852 | None:intergenic | 40.0% | |
! | AATGTGACTTGCCAAACTCA+GGG | + | chr4_4:17232021-17232040 | Msa0672370:intron | 40.0% |
TAAGAGCAAGAGAAGAGAAG+AGG | + | chr4_4:17233137-17233156 | Msa0672370:intron | 40.0% | |
AAGAGCAAGAGAAGAGAAGA+GGG | + | chr4_4:17233138-17233157 | Msa0672370:intron | 40.0% | |
!! | CAATGGCAAGAGCTTTGAAT+TGG | + | chr4_4:17233173-17233192 | Msa0672370:intron | 40.0% |
!! | GGTAAGGCTCTAAGCTAAAA+AGG | - | chr4_4:17233242-17233261 | None:intergenic | 40.0% |
! | TTTAGCTTAGAGCCTTACCT+TGG | + | chr4_4:17233243-17233262 | Msa0672370:intron | 40.0% |
TTAGCTTAGAGCCTTACCTT+GGG | + | chr4_4:17233244-17233263 | Msa0672370:intron | 40.0% | |
! | TGTGTAAAGCTCTAATGCCA+AGG | + | chr4_4:17233373-17233392 | Msa0672370:intron | 40.0% |
! | GTGTAAAGCTCTAATGCCAA+GGG | + | chr4_4:17233374-17233393 | Msa0672370:intron | 40.0% |
CATAGTTGCAAAACTCCAAG+GGG | - | chr4_4:17233750-17233769 | None:intergenic | 40.0% | |
CTTCAATTGAGAGGGAGTTA+TGG | - | chr4_4:17234004-17234023 | None:intergenic | 40.0% | |
! | TTAGCTTTCATGTGAGCAGT+TGG | - | chr4_4:17234077-17234096 | None:intergenic | 40.0% |
TCCACTTCACAACTTATCTG+CGG | - | chr4_4:17234142-17234161 | None:intergenic | 40.0% | |
CTGCAAAATCTTCCATTCAG+TGG | + | chr4_4:17234640-17234659 | Msa0672370:CDS | 40.0% | |
GACCAAAGATTAGGAACAGA+GGG | - | chr4_4:17235139-17235158 | None:intergenic | 40.0% | |
AGACCAAAGATTAGGAACAG+AGG | - | chr4_4:17235140-17235159 | None:intergenic | 40.0% | |
GCTTTCCTATGAAGGAAATC+AGG | - | chr4_4:17235417-17235436 | None:intergenic | 40.0% | |
! | TGACAACAGGCAGATTTTGA+TGG | + | chr4_4:17235575-17235594 | Msa0672370:intron | 40.0% |
!! | CAGGCAGATTTTGATGGAAA+TGG | + | chr4_4:17235581-17235600 | Msa0672370:intron | 40.0% |
CAATGAGTGTTCACATGAGA+AGG | + | chr4_4:17235630-17235649 | Msa0672370:CDS | 40.0% | |
TTATCCAAGTCGACATCGTT+GGG | - | chr4_4:17235688-17235707 | None:intergenic | 40.0% | |
!! | ATGTCGACTTGGATAAGGTA+AGG | + | chr4_4:17235692-17235711 | Msa0672370:intron | 40.0% |
AAGGCAATGATGAAGACAAG+AGG | + | chr4_4:17235840-17235859 | Msa0672370:intron | 40.0% | |
TGATGAAGACAAGAGGAGAT+TGG | + | chr4_4:17235847-17235866 | Msa0672370:intron | 40.0% | |
GACAAGAGGAGATTGGAAAA+TGG | + | chr4_4:17235854-17235873 | Msa0672370:intron | 40.0% | |
GCATGCTGCTGAATAATTAG+TGG | - | chr4_4:17236052-17236071 | None:intergenic | 40.0% | |
! | AGCCACTTTGCAACAAATGA+AGG | - | chr4_4:17236340-17236359 | None:intergenic | 40.0% |
TTTGCTTGCGGTCAACAAAA+AGG | + | chr4_4:17236883-17236902 | Msa0672370:intron | 40.0% | |
TTGCTTGCGGTCAACAAAAA+GGG | + | chr4_4:17236884-17236903 | Msa0672370:intron | 40.0% | |
ATTAATTCGGGGTTGTACCA+TGG | + | chr4_4:17237014-17237033 | Msa0672370:intron | 40.0% | |
GAATGTTGCAAAGAGTTCCA+TGG | - | chr4_4:17237034-17237053 | None:intergenic | 40.0% | |
GAACTCTTTGCAACATTCAG+TGG | + | chr4_4:17237036-17237055 | Msa0672370:intron | 40.0% | |
CAAAATTCTAGGTGGTACCA+TGG | + | chr4_4:17237169-17237188 | Msa0672370:intron | 40.0% | |
GAATGTTGCAAAGAGTTCCA+TGG | - | chr4_4:17237034-17237053 | None:intergenic | 40.0% | |
CCGCATATTTGCAATTTCTC+AGG | + | chr4_4:17237308-17237327 | Msa0672370:intron | 40.0% | |
GAAGTTTACACACGTGCATT+AGG | - | chr4_4:17237462-17237481 | None:intergenic | 40.0% | |
CAAAAACAGGAATCTGGACA+TGG | + | chr4_4:17237795-17237814 | Msa0672370:intron | 40.0% | |
TGGATATGTACCTTGTGCAT+TGG | + | chr4_4:17237824-17237843 | Msa0672370:CDS | 40.0% | |
GGCCTGTAAAGTTAAAACCA+TGG | + | chr4_4:17237845-17237864 | Msa0672370:CDS | 40.0% | |
ATCTTGAGACAACATGGGTA+GGG | + | chr4_4:17237911-17237930 | Msa0672370:CDS | 40.0% | |
GTCTTGAAATGGGGTTATGT+AGG | + | chr4_4:17237944-17237963 | Msa0672370:CDS | 40.0% | |
TCTCTAGCAACAAGATTGAG+TGG | + | chr4_4:17237986-17238005 | Msa0672370:CDS | 40.0% | |
TACACCTCCAGTTGTTAATC+AGG | + | chr4_4:17238026-17238045 | Msa0672370:intron | 40.0% | |
AGAAAGCTGAGAAAGACATG+TGG | + | chr4_4:17238452-17238471 | Msa0672370:CDS | 40.0% | |
! | TTTTGTAGGGACTTGTGGTT+TGG | - | chr4_4:17239100-17239119 | None:intergenic | 40.0% |
GACATAACGATTTGAGCTGA+AGG | - | chr4_4:17239225-17239244 | None:intergenic | 40.0% | |
GGCATTACAATGCCTCTCAT+TGG | + | chr4_4:17228568-17228587 | Msa0672370:CDS | 45.0% | |
!! | TTAGTACCTCAAGGGCATTG+TGG | - | chr4_4:17228645-17228664 | None:intergenic | 45.0% |
TCAATGCAGCAACAGGATCA+TGG | - | chr4_4:17229294-17229313 | None:intergenic | 45.0% | |
! | TACCTTTTTGCCCTTCTGAG+GGG | + | chr4_4:17229429-17229448 | Msa0672370:intron | 45.0% |
TACCAAAATGCCCCTCAGAA+GGG | - | chr4_4:17229442-17229461 | None:intergenic | 45.0% | |
TTACCAAAATGCCCCTCAGA+AGG | - | chr4_4:17229443-17229462 | None:intergenic | 45.0% | |
AAGGGAACGAGAGAAAGAAG+AGG | + | chr4_4:17229635-17229654 | Msa0672370:intron | 45.0% | |
AGGGAACGAGAGAAAGAAGA+GGG | + | chr4_4:17229636-17229655 | Msa0672370:intron | 45.0% | |
AGAGAAAGAAGAGGGAACGA+AGG | + | chr4_4:17229644-17229663 | Msa0672370:intron | 45.0% | |
GAGAAAGAAGAGGGAACGAA+GGG | + | chr4_4:17229645-17229664 | Msa0672370:intron | 45.0% | |
ATTGGGGCTGAAAAGGGTTA+GGG | - | chr4_4:17229867-17229886 | None:intergenic | 45.0% | |
AATTGGGGCTGAAAAGGGTT+AGG | - | chr4_4:17229868-17229887 | None:intergenic | 45.0% | |
! | ATGGGGTTTGGGTTTGCAAT+TGG | + | chr4_4:17229963-17229982 | Msa0672370:CDS | 45.0% |
! | TTGATCTGAATGGTGCTGGA+TGG | + | chr4_4:17230113-17230132 | Msa0672370:intron | 45.0% |
! | GATTTGAAGCCGGTGAGTTA+TGG | + | chr4_4:17230715-17230734 | Msa0672370:intron | 45.0% |
! | TTTGAAGCCGGTGAGTTATG+GGG | + | chr4_4:17230717-17230736 | Msa0672370:intron | 45.0% |
CATTCAGGTGTCTTTCTTGC+TGG | + | chr4_4:17231391-17231410 | Msa0672370:intron | 45.0% | |
AAGCATACACTCCCAATGAC+TGG | + | chr4_4:17231818-17231837 | Msa0672370:intron | 45.0% | |
!! | TCCCAATGACTGGTCTATGA+TGG | + | chr4_4:17231828-17231847 | Msa0672370:intron | 45.0% |
! | GAATGTGACTTGCCAAACTC+AGG | + | chr4_4:17232020-17232039 | Msa0672370:intron | 45.0% |
! | ATGTGACTTGCCAAACTCAG+GGG | + | chr4_4:17232022-17232041 | Msa0672370:intron | 45.0% |
! | GAAATATTTGGTTCACCGCC+CGG | + | chr4_4:17233070-17233089 | Msa0672370:intron | 45.0% |
! | GAGTTGCTTTCTTCATCCCT+TGG | - | chr4_4:17233393-17233412 | None:intergenic | 45.0% |
! | TTGGTGTGTTACTGTCGTCA+AGG | + | chr4_4:17233513-17233532 | Msa0672370:intron | 45.0% |
ATCATGTGTATGCAACCCCT+TGG | + | chr4_4:17233732-17233751 | Msa0672370:intron | 45.0% | |
CCACTTCACAACTTATCTGC+GGG | - | chr4_4:17234141-17234160 | None:intergenic | 45.0% | |
GCATCAAGCATCTTTGACAG+AGG | - | chr4_4:17234457-17234476 | None:intergenic | 45.0% | |
! | ACTGATAGTGTTATCGGGGA+AGG | + | chr4_4:17234484-17234503 | Msa0672370:CDS | 45.0% |
CTGCATTCTTGCATATCAGG+AGG | + | chr4_4:17234668-17234687 | Msa0672370:CDS | 45.0% | |
GATGGGCGCATATTATTACG+AGG | + | chr4_4:17234715-17234734 | Msa0672370:CDS | 45.0% | |
GAGTTTCTGCCAATACCAAG+TGG | - | chr4_4:17234955-17234974 | None:intergenic | 45.0% | |
GAACAGAGGGAGTAGATGAT+GGG | - | chr4_4:17235126-17235145 | None:intergenic | 45.0% | |
CTCCCTCTGTTCCTAATCTT+TGG | + | chr4_4:17235134-17235153 | Msa0672370:intron | 45.0% | |
CACACATGTTGCTGTCATGT+CGG | - | chr4_4:17235305-17235324 | None:intergenic | 45.0% | |
CAGCCAAAGCTTTCCTATGA+AGG | - | chr4_4:17235425-17235444 | None:intergenic | 45.0% | |
AGTGTTCACATGAGAAGGCT+TGG | + | chr4_4:17235635-17235654 | Msa0672370:CDS | 45.0% | |
CTTATCCAAGTCGACATCGT+TGG | - | chr4_4:17235689-17235708 | None:intergenic | 45.0% | |
!! | CAACGATGTCGACTTGGATA+AGG | + | chr4_4:17235687-17235706 | Msa0672370:CDS | 45.0% |
! | GGATGGTCGAGTAAGTTTTG+AGG | + | chr4_4:17235812-17235831 | Msa0672370:intron | 45.0% |
! | CAAATTGCATGTGGGGGTAT+AGG | + | chr4_4:17235981-17236000 | Msa0672370:intron | 45.0% |
CCTCACACTTTCTTCAGATG+AGG | - | chr4_4:17236137-17236156 | None:intergenic | 45.0% | |
! | CCTCATCTGAAGAAAGTGTG+AGG | + | chr4_4:17236134-17236153 | Msa0672370:intron | 45.0% |
TAACGGAAAGTGAGCAGAGA+TGG | + | chr4_4:17236809-17236828 | Msa0672370:intron | 45.0% | |
GCAAATATGCGGAGATCAAC+CGG | - | chr4_4:17237300-17237319 | None:intergenic | 45.0% | |
ACTTTACAGGCCAATGCACA+AGG | - | chr4_4:17237837-17237856 | None:intergenic | 45.0% | |
GGAACAGGATAGTTAACCCA+TGG | - | chr4_4:17237865-17237884 | None:intergenic | 45.0% | |
GATCTTGAGACAACATGGGT+AGG | + | chr4_4:17237910-17237929 | Msa0672370:CDS | 45.0% | |
ATGGGGTTATGTAGGTCCAT+TGG | + | chr4_4:17237952-17237971 | Msa0672370:CDS | 45.0% | |
AGGTGGAAATGCATCCTATG+TGG | + | chr4_4:17238423-17238442 | Msa0672370:intron | 45.0% | |
TGGAAATGCATCCTATGTGG+AGG | + | chr4_4:17238426-17238445 | Msa0672370:CDS | 45.0% | |
! | TGGGGTTGCTTTGTGTTTGA+AGG | - | chr4_4:17238579-17238598 | None:intergenic | 45.0% |
!! | TTAAATTAATATAGTAAAAT+AGG | + | chr4_4:17229032-17229051 | Msa0672370:intron | 5.0% |
!! | ATATATATATATATATATCA+AGG | + | chr4_4:17231590-17231609 | Msa0672370:intron | 5.0% |
!!! | TTATTAATATTTTTTTTTGA+AGG | + | chr4_4:17236656-17236675 | Msa0672370:intron | 5.0% |
!!! | TTTTTTACAAAATATTATAT+CGG | - | chr4_4:17237632-17237651 | None:intergenic | 5.0% |
!! | TATGGCTCTGAGCCAGCATT+AGG | + | chr4_4:17229184-17229203 | Msa0672370:CDS | 50.0% |
GTGATCACTCCCCCACAATT+TGG | - | chr4_4:17229272-17229291 | None:intergenic | 50.0% | |
AAGAAGGGGGACGAGAGAAA+CGG | + | chr4_4:17229526-17229545 | Msa0672370:intron | 50.0% | |
AGAGAAACGGGAGAGGAAGA+AGG | + | chr4_4:17229539-17229558 | Msa0672370:intron | 50.0% | |
GAGAAACGGGAGAGGAAGAA+GGG | + | chr4_4:17229540-17229559 | Msa0672370:intron | 50.0% | |
! | TCTCCCGTTCCTGTTTCTCT+CGG | - | chr4_4:17229672-17229691 | None:intergenic | 50.0% |
AGAGAGAACGGAAGAGGAGA+GGG | + | chr4_4:17229707-17229726 | Msa0672370:intron | 50.0% | |
!! | GTGCAGATCAGAGTGTTGGA+CGG | - | chr4_4:17229765-17229784 | None:intergenic | 50.0% |
ATCGGTGCAGATCAGAGTGT+TGG | - | chr4_4:17229769-17229788 | None:intergenic | 50.0% | |
GGCTGAAAAGGGTTAGGGTT+TGG | - | chr4_4:17229862-17229881 | None:intergenic | 50.0% | |
! | GGGTTTGGGTTTGCAATTGG+AGG | + | chr4_4:17229966-17229985 | Msa0672370:CDS | 50.0% |
CGGGGGTTATCAGTACTCTT+TGG | + | chr4_4:17230491-17230510 | Msa0672370:intron | 50.0% | |
! | CTTTGGTTCATGCAGCTGCT+TGG | + | chr4_4:17230508-17230527 | Msa0672370:intron | 50.0% |
! | TTGGTGCCTTAGCGATGGTA+AGG | + | chr4_4:17230983-17231002 | Msa0672370:intron | 50.0% |
TGCTAGTAGTCCCCTGAGTT+TGG | - | chr4_4:17232035-17232054 | None:intergenic | 50.0% | |
! | GTTTGTGGTGGAGGAGTTTC+TGG | + | chr4_4:17232495-17232514 | Msa0672370:intron | 50.0% |
! | CCTTGTCATTTCAATCCGGG+CGG | - | chr4_4:17233088-17233107 | None:intergenic | 50.0% |
AGAGAAGAGAAGAGGGCTGA+AGG | + | chr4_4:17233145-17233164 | Msa0672370:intron | 50.0% | |
GAGAAGAGAAGAGGGCTGAA+GGG | + | chr4_4:17233146-17233165 | Msa0672370:intron | 50.0% | |
TGAGTGAGAAATGGGAGGGA+GGG | - | chr4_4:17233322-17233341 | None:intergenic | 50.0% | |
TCCCTCCCATTTCTCACTCA+CGG | + | chr4_4:17233322-17233341 | Msa0672370:intron | 50.0% | |
ACGACCCGTGAGTGAGAAAT+GGG | - | chr4_4:17233330-17233349 | None:intergenic | 50.0% | |
AACGACCCGTGAGTGAGAAA+TGG | - | chr4_4:17233331-17233350 | None:intergenic | 50.0% | |
AGGCACAGAGAAGGATAGAC+TGG | + | chr4_4:17233890-17233909 | Msa0672370:intron | 50.0% | |
CCCGCAGATAAGTTGTGAAG+TGG | + | chr4_4:17234138-17234157 | Msa0672370:intron | 50.0% | |
CGGGGAAGGATGTGTGATTA+AGG | + | chr4_4:17234498-17234517 | Msa0672370:CDS | 50.0% | |
AATGCAGCCCAACCACTGAA+TGG | - | chr4_4:17234655-17234674 | None:intergenic | 50.0% | |
GGGCTGCATTCTTGCATATC+AGG | + | chr4_4:17234665-17234684 | Msa0672370:CDS | 50.0% | |
GCTAAAGGCAGTGTTCCACT+TGG | + | chr4_4:17234937-17234956 | Msa0672370:CDS | 50.0% | |
GGCAGTGTTCCACTTGGTAT+TGG | + | chr4_4:17234943-17234962 | Msa0672370:CDS | 50.0% | |
GGAACAGAGGGAGTAGATGA+TGG | - | chr4_4:17235127-17235146 | None:intergenic | 50.0% | |
TACACTACGATGCCGCAAGA+AGG | - | chr4_4:17235214-17235233 | None:intergenic | 50.0% | |
! | CATTCCCAACGATGTCGACT+TGG | + | chr4_4:17235681-17235700 | Msa0672370:CDS | 50.0% |
TTACAAACCCGTGCTTCGCA+CGG | - | chr4_4:17237667-17237686 | None:intergenic | 50.0% | |
TGAGACAACATGGGTAGGGA+TGG | + | chr4_4:17237915-17237934 | Msa0672370:CDS | 50.0% | |
AGCTTTCTCTGCCTCCACAT+AGG | - | chr4_4:17238440-17238459 | None:intergenic | 50.0% | |
GTAAGTGCCTACTCACCACT+TGG | + | chr4_4:17238491-17238510 | Msa0672370:CDS | 50.0% | |
TGCAGTCCACAATGCCCTTG+AGG | + | chr4_4:17228636-17228655 | Msa0672370:CDS | 55.0% | |
TGCCCCTCAGAAGGGCAAAA+AGG | - | chr4_4:17229434-17229453 | None:intergenic | 55.0% | |
!!! | TGCCCTTCTGAGGGGCATTT+TGG | + | chr4_4:17229437-17229456 | Msa0672370:intron | 55.0% |
AGAAGGGGGACGAGAGAAAC+GGG | + | chr4_4:17229527-17229546 | Msa0672370:intron | 55.0% | |
AAACGGGAGAGGAAGAAGGG+TGG | + | chr4_4:17229543-17229562 | Msa0672370:intron | 55.0% | |
ACGAAGGGACCGAGAGAAAC+AGG | + | chr4_4:17229660-17229679 | Msa0672370:intron | 55.0% | |
GGGACCGAGAGAAACAGGAA+CGG | + | chr4_4:17229665-17229684 | Msa0672370:intron | 55.0% | |
GGACCGAGAGAAACAGGAAC+GGG | + | chr4_4:17229666-17229685 | Msa0672370:intron | 55.0% | |
GAGAGAAACAGGAACGGGAG+AGG | + | chr4_4:17229671-17229690 | Msa0672370:intron | 55.0% | |
ACAGGAACGGGAGAGGAAGA+AGG | + | chr4_4:17229678-17229697 | Msa0672370:intron | 55.0% | |
CAGGAACGGGAGAGGAAGAA+GGG | + | chr4_4:17229679-17229698 | Msa0672370:intron | 55.0% | |
AGAAGGGCGACGAGAGAGAA+CGG | + | chr4_4:17229695-17229714 | Msa0672370:intron | 55.0% | |
GAGAGAGAACGGAAGAGGAG+AGG | + | chr4_4:17229706-17229725 | Msa0672370:intron | 55.0% | |
!! | GTCTCTTGGTGCCTTAGCGA+TGG | + | chr4_4:17230978-17230997 | Msa0672370:CDS | 55.0% |
CCGCCCGGATTGAAATGACA+AGG | + | chr4_4:17233085-17233104 | Msa0672370:intron | 55.0% | |
GAGGGCTGAAGGGATAGCAA+TGG | + | chr4_4:17233156-17233175 | Msa0672370:intron | 55.0% | |
TGAGAAATGGGAGGGAGGGA+GGG | - | chr4_4:17233318-17233337 | None:intergenic | 55.0% | |
GTGAGTGAGAAATGGGAGGG+AGG | - | chr4_4:17233323-17233342 | None:intergenic | 55.0% | |
CCCGTGAGTGAGAAATGGGA+GGG | - | chr4_4:17233326-17233345 | None:intergenic | 55.0% | |
CCCTCCCATTTCTCACTCAC+GGG | + | chr4_4:17233323-17233342 | Msa0672370:intron | 55.0% | |
ACCCGTGAGTGAGAAATGGG+AGG | - | chr4_4:17233327-17233346 | None:intergenic | 55.0% | |
! | GTGTTGGTCAGGCACAGAGA+AGG | + | chr4_4:17233881-17233900 | Msa0672370:intron | 55.0% |
TACAAACCCGTGCTTCGCAC+GGG | - | chr4_4:17237666-17237685 | None:intergenic | 55.0% | |
AGTGCCTACTCACCACTTGG+TGG | + | chr4_4:17238494-17238513 | Msa0672370:CDS | 55.0% | |
TGGTCCACCAAGTGGTGAGT+AGG | - | chr4_4:17238501-17238520 | None:intergenic | 55.0% | |
! | TACTCACCACTTGGTGGACC+AGG | + | chr4_4:17238500-17238519 | Msa0672370:CDS | 55.0% |
! | ACTCACCACTTGGTGGACCA+GGG | + | chr4_4:17238501-17238520 | Msa0672370:CDS | 55.0% |
! | TTGGTGGACCAGGGAATGCA+TGG | + | chr4_4:17238510-17238529 | Msa0672370:CDS | 55.0% |
! | TGGTGGACCAGGGAATGCAT+GGG | + | chr4_4:17238511-17238530 | Msa0672370:CDS | 55.0% |
ACACAAAGCAACCCCAGCAC+AGG | + | chr4_4:17238583-17238602 | Msa0672370:CDS | 55.0% | |
GCGACGAGAGAGAACGGAAG+AGG | + | chr4_4:17229701-17229720 | Msa0672370:intron | 60.0% | |
!! | GATCAGAGTGTTGGACGGCG+AGG | - | chr4_4:17229760-17229779 | None:intergenic | 60.0% |
AAATGGGAGGGAGGGAGGGA+GGG | - | chr4_4:17233314-17233333 | None:intergenic | 60.0% | |
GTGAGAAATGGGAGGGAGGG+AGG | - | chr4_4:17233319-17233338 | None:intergenic | 60.0% | |
ACAAACCCGTGCTTCGCACG+GGG | - | chr4_4:17237665-17237684 | None:intergenic | 60.0% | |
GCATTCCCTGGTCCACCAAG+TGG | - | chr4_4:17238509-17238528 | None:intergenic | 60.0% | |
GGTGGACCAGGGAATGCATG+GGG | + | chr4_4:17238512-17238531 | Msa0672370:CDS | 60.0% | |
GGGGACGAGAGAAACGGGAG+AGG | + | chr4_4:17229532-17229551 | Msa0672370:intron | 65.0% | |
GTGTTGGACGGCGAGGTCGA+CGG | - | chr4_4:17229753-17229772 | None:intergenic | 65.0% | |
AATGGGAGGGAGGGAGGGAG+GGG | - | chr4_4:17233313-17233332 | None:intergenic | 65.0% | |
GAAATGGGAGGGAGGGAGGG+AGG | - | chr4_4:17233315-17233334 | None:intergenic | 65.0% | |
GCTAACCCCCGTGCGAAGCA+CGG | + | chr4_4:17237656-17237675 | Msa0672370:intron | 65.0% | |
CTAACCCCCGTGCGAAGCAC+GGG | + | chr4_4:17237657-17237676 | Msa0672370:intron | 65.0% | |
CAAACCCGTGCTTCGCACGG+GGG | - | chr4_4:17237664-17237683 | None:intergenic | 65.0% | |
TTGGACGGCGAGGTCGACGG+CGG | - | chr4_4:17229750-17229769 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 17228538 | 17239306 | 17228538 | ID=Msa0672370;Name=Msa0672370 |
chr4_4 | mRNA | 17228538 | 17239306 | 17228538 | ID=Msa0672370-mRNA-1;Parent=Msa0672370;Name=Msa0672370-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0.38|0.35|1|0.61|0.64|14|0|544 |
chr4_4 | exon | 17228538 | 17228657 | 17228538 | ID=Msa0672370-mRNA-1:exon:5002;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17229151 | 17229326 | 17229151 | ID=Msa0672370-mRNA-1:exon:5003;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17229962 | 17230009 | 17229962 | ID=Msa0672370-mRNA-1:exon:5004;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17230639 | 17230726 | 17230639 | ID=Msa0672370-mRNA-1:exon:5005;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17230862 | 17230999 | 17230862 | ID=Msa0672370-mRNA-1:exon:5006;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17234436 | 17234519 | 17234436 | ID=Msa0672370-mRNA-1:exon:5007;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17234638 | 17234736 | 17234638 | ID=Msa0672370-mRNA-1:exon:5008;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17234910 | 17235029 | 17234910 | ID=Msa0672370-mRNA-1:exon:5009;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17235584 | 17235708 | 17235584 | ID=Msa0672370-mRNA-1:exon:5010;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17235813 | 17235821 | 17235813 | ID=Msa0672370-mRNA-1:exon:5011;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17237804 | 17238035 | 17237804 | ID=Msa0672370-mRNA-1:exon:5012;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17238425 | 17238604 | 17238425 | ID=Msa0672370-mRNA-1:exon:5013;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17238924 | 17239091 | 17238924 | ID=Msa0672370-mRNA-1:exon:5014;Parent=Msa0672370-mRNA-1 |
chr4_4 | exon | 17239259 | 17239306 | 17239259 | ID=Msa0672370-mRNA-1:exon:5015;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17228538 | 17228657 | 17228538 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17229151 | 17229326 | 17229151 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17229962 | 17230009 | 17229962 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17230639 | 17230726 | 17230639 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17230862 | 17230999 | 17230862 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17234436 | 17234519 | 17234436 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17234638 | 17234736 | 17234638 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17234910 | 17235029 | 17234910 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17235584 | 17235708 | 17235584 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17235813 | 17235821 | 17235813 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17237804 | 17238035 | 17237804 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17238425 | 17238604 | 17238425 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17238924 | 17239091 | 17238924 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
chr4_4 | CDS | 17239259 | 17239306 | 17239259 | ID=Msa0672370-mRNA-1:cds;Parent=Msa0672370-mRNA-1 |
Gene Sequence |
Protein sequence |