AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185870 MtrunA17_Chr8g0352031 98.356 365 6 0 1 365 1 365 0.0 732
Msa1185870 MtrunA17_Chr3g0088301 82.308 390 43 4 1 365 1 389 0.0 615
Msa1185870 MtrunA17_Chr4g0040341 75.134 374 79 5 1 364 1 370 0.0 525
Msa1185870 MtrunA17_Chr2g0328891 73.481 362 87 3 6 365 8 362 3.36e-176 494
Msa1185870 MtrunA17_Chr8g0393031 59.722 288 115 1 67 354 17 303 5.53e-126 365
Msa1185870 MtrunA17_Chr3g0135801 39.604 303 170 7 63 358 29 325 6.25e-69 219
Msa1185870 MtrunA17_Chr3g0135861 30.868 311 178 9 64 352 31 326 8.20e-34 128
Msa1185870 MtrunA17_Chr6g0488081 28.094 299 195 7 64 352 15 303 2.11e-30 118
Msa1185870 MtrunA17_Chr4g0006851 32.281 285 169 8 68 349 89 352 4.87e-28 113
Msa1185870 MtrunA17_Chr8g0347451 28.618 304 179 9 62 339 45 336 4.38e-27 110
Msa1185870 MtrunA17_Chr8g0347451 26.108 203 132 6 71 261 157 353 5.85e-11 63.2
Msa1185870 MtrunA17_Chr5g0396801 28.197 305 167 9 67 339 37 321 5.25e-27 109
Msa1185870 MtrunA17_Chr7g0240341 27.815 302 198 8 65 355 22 314 1.29e-25 105
Msa1185870 MtrunA17_Chr7g0242311 30.634 284 165 9 79 355 98 356 7.24e-25 104
Msa1185870 MtrunA17_Chr1g0149111 29.329 283 171 9 68 344 139 398 9.77e-25 104
Msa1185870 MtrunA17_Chr1g0149111 28.774 212 127 7 56 262 219 411 4.86e-14 72.8
Msa1185870 MtrunA17_Chr3g0137941 27.148 291 186 9 71 356 125 394 2.01e-24 103
Msa1185870 MtrunA17_Chr3g0137941 28.440 218 132 7 56 268 202 400 3.22e-15 76.3
Msa1185870 MtrunA17_Chr7g0252401 29.553 291 161 7 68 344 207 467 3.03e-24 103
Msa1185870 MtrunA17_Chr8g0385571 28.975 283 176 8 68 344 227 490 4.20e-24 103
Msa1185870 MtrunA17_Chr3g0131501 28.269 283 178 8 68 344 205 468 4.69e-23 100
Msa1185870 MtrunA17_Chr5g0436041 24.919 309 210 8 58 355 24 321 6.50e-23 97.8
Msa1185870 MtrunA17_Chr4g0063561 25.000 300 162 7 68 344 123 382 1.71e-22 97.8
Msa1185870 MtrunA17_Chr4g0063561 27.619 210 127 5 58 262 206 395 1.18e-15 77.8
Msa1185870 MtrunA17_Chr4g0067231 25.455 330 198 8 58 351 4 321 2.08e-22 96.7
Msa1185870 MtrunA17_Chr2g0296061 27.476 313 181 9 71 349 18 318 3.30e-22 95.9
Msa1185870 MtrunA17_Chr3g0115801 26.936 297 170 10 71 344 119 391 1.75e-18 86.3
Msa1185870 MtrunA17_Chr5g0411411 27.241 290 187 10 62 339 3 280 1.48e-17 82.0
Msa1185870 MtrunA17_Chr4g0000261 24.503 302 183 8 65 344 63 341 6.89e-17 80.9
Msa1185870 MtrunA17_Chr8g0366791 26.207 290 190 9 62 339 3 280 6.21e-16 77.4
Msa1185870 MtrunA17_Chr4g0004571 27.049 244 163 5 113 349 51 286 7.30e-16 77.4
Msa1185870 MtrunA17_Chr3g0133111 25.418 299 181 10 68 337 6 291 9.71e-15 74.3
Msa1185870 MtrunA17_Chr1g0196921 21.691 272 200 5 63 330 9 271 1.79e-14 73.2
Msa1185870 MtrunA17_Chr2g0331771 24.662 296 200 7 63 349 146 427 2.21e-14 73.9
Msa1185870 MtrunA17_Chr7g0241521 24.453 274 189 7 63 330 12 273 2.49e-14 72.8
Msa1185870 MtrunA17_Chr6g0488341 26.122 245 151 8 116 352 6 228 5.61e-14 70.9
Msa1185870 MtrunA17_Chr4g0008061 24.638 276 186 9 63 330 10 271 3.44e-13 69.7
Msa1185870 MtrunA17_Chr8g0382201 23.232 297 181 9 71 344 198 470 6.60e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185870 AT5G13490.1 79.221 385 60 3 1 365 1 385 0.0 588
Msa1185870 AT5G13490.2 79.221 385 60 3 1 365 1 385 0.0 588
Msa1185870 AT3G08580.2 81.984 383 49 5 1 365 1 381 0.0 575
Msa1185870 AT3G08580.1 81.984 383 49 5 1 365 1 381 0.0 575
Msa1185870 AT4G28390.1 74.406 379 80 5 2 364 1 378 0.0 528
Msa1185870 AT4G28390.2 74.406 379 80 5 2 364 1 378 0.0 528
Msa1185870 AT5G17400.1 62.887 291 107 1 64 354 10 299 7.46e-130 374
Msa1185870 AT5G56450.1 38.710 310 170 7 55 352 21 322 6.56e-67 214
Msa1185870 AT2G37890.1 29.846 325 207 8 43 355 17 332 4.31e-32 123
Msa1185870 AT4G26180.1 31.650 297 171 10 64 344 17 297 1.63e-31 122
Msa1185870 AT3G55640.1 28.041 296 195 7 67 353 37 323 2.28e-31 121
Msa1185870 AT3G55640.1 25.628 199 129 4 63 258 140 322 5.83e-13 69.7
Msa1185870 AT3G55640.4 28.041 296 195 7 67 353 37 323 2.28e-31 121
Msa1185870 AT3G55640.4 25.628 199 129 4 63 258 140 322 5.83e-13 69.7
Msa1185870 AT4G26180.2 31.959 291 166 10 64 338 17 291 9.90e-31 119
Msa1185870 AT1G14560.1 30.605 281 170 7 79 344 38 308 1.76e-30 119
Msa1185870 AT1G14560.2 30.909 275 165 7 79 338 38 302 8.76e-30 116
Msa1185870 AT3G53940.1 30.068 296 186 8 60 344 63 348 2.36e-29 116
Msa1185870 AT3G53940.1 27.619 210 129 5 61 263 169 362 1.71e-13 71.2
Msa1185870 AT3G51870.1 30.986 284 164 9 79 355 102 360 1.92e-26 108
Msa1185870 AT4G01100.1 27.508 309 168 9 71 344 45 332 3.75e-26 107
Msa1185870 AT5G01500.1 29.927 274 168 9 79 349 130 382 5.13e-25 105
Msa1185870 AT4G32400.1 29.078 282 173 9 68 344 114 373 7.85e-25 104
Msa1185870 AT4G01100.2 27.707 314 175 10 71 344 45 346 1.94e-24 103
Msa1185870 AT4G01100.3 26.733 303 166 9 77 344 1 282 5.32e-24 100
Msa1185870 AT5G51050.1 29.537 281 174 7 68 344 223 483 2.22e-23 101
Msa1185870 AT3G21390.1 26.852 324 197 7 58 349 9 324 9.00e-22 95.1
Msa1185870 AT5G61810.2 27.273 297 184 7 52 344 52 320 9.92e-22 95.1
Msa1185870 AT3G21390.2 26.852 324 197 7 58 349 31 346 1.25e-21 95.1
Msa1185870 AT5G61810.1 26.578 301 181 7 52 344 195 463 5.21e-21 94.4
Msa1185870 AT3G20240.1 24.324 296 187 6 67 344 51 327 1.02e-20 92.4
Msa1185870 AT5G07320.1 27.306 271 170 6 77 344 218 464 1.46e-20 93.2
Msa1185870 AT3G55640.2 28.061 196 128 3 67 258 37 223 2.30e-20 89.7
Msa1185870 AT3G55640.3 28.061 196 128 3 67 258 37 223 2.30e-20 89.7
Msa1185870 AT1G14560.3 31.915 188 112 5 172 344 24 210 2.83e-20 89.0
Msa1185870 AT5G48970.1 25.153 326 201 8 58 349 12 328 4.19e-19 87.8
Msa1185870 AT3G53940.2 29.386 228 143 6 60 279 63 280 3.36e-18 84.3
Msa1185870 AT5G46800.2 28.125 288 180 10 67 339 7 282 5.82e-16 78.2
Msa1185870 AT5G46800.3 28.125 288 180 10 67 339 7 282 5.82e-16 78.2
Msa1185870 AT5G46800.1 28.125 288 180 10 67 339 7 282 5.82e-16 78.2
Msa1185870 AT5G64970.1 25.676 296 175 9 71 344 138 410 6.57e-15 75.9
Msa1185870 AT5G64970.2 25.000 296 177 9 71 344 14 286 2.52e-14 73.2
Msa1185870 AT5G64970.3 25.952 289 169 9 71 337 138 403 6.38e-14 72.8
Msa1185870 AT5G48970.2 25.098 255 157 7 121 349 11 257 1.89e-13 70.1
Msa1185870 AT3G54110.1 23.792 269 187 8 68 330 15 271 2.26e-13 70.5
Msa1185870 AT1G14140.1 23.420 269 190 7 68 330 16 274 9.80e-13 68.6
Msa1185870 AT1G14140.1 27.411 197 128 5 173 359 18 209 7.47e-11 63.2
Msa1185870 AT5G58970.1 23.973 292 192 8 58 337 6 279 1.27e-12 68.2
Msa1185870 AT5G66380.1 27.136 199 134 5 166 359 5 197 1.66e-12 67.8
Msa1185870 AT1G79900.1 26.860 242 153 7 115 349 53 277 4.72e-12 66.6
Msa1185870 AT5G01340.1 27.473 182 115 4 59 236 106 274 1.22e-11 65.5
Msa1185870 AT2G33820.1 22.623 305 218 7 64 359 14 309 1.50e-11 65.1
Msa1185870 AT1G78180.1 24.000 300 175 8 71 344 131 403 9.14e-11 63.5

Find 124 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTGCTAAGTCTTTGTTTA+AGG 0.148304 8_1:+23604538 Msa1185870:CDS
TTGAAGCCAGTTCTCCTTAC+TGG 0.211857 8_1:+23603863 Msa1185870:CDS
TTCTTTGCTAGCTTTGGTCT+TGG 0.283922 8_1:+23604380 Msa1185870:CDS
GAAACTCAAATCAGACAAAA+TGG 0.317404 8_1:-23604872 None:intergenic
GGCTTTGAACTTTGCATTCA+AGG 0.320951 8_1:+23603520 Msa1185870:intron
TGGCTCATCACCAATGGTGC+TGG 0.321684 8_1:+23604404 Msa1185870:CDS
CCTCATTCTTGAGGATTTGT+TGG 0.335787 8_1:-23604517 None:intergenic
CTTCTCCTAACTGTGTCAAT+TGG 0.336850 8_1:-23604440 None:intergenic
GCAGGAGCTGCAACAAAGAT+AGG 0.339554 8_1:-23602971 None:intergenic
GATAGTTTCTTTGCTAGCTT+TGG 0.347055 8_1:+23604374 Msa1185870:CDS
CGCGAGTTTGTTGGAGACTT+TGG 0.347151 8_1:-23601302 None:intergenic
CAAAAGCTTAATTCGTTCAA+TGG 0.358980 8_1:-23603068 None:intergenic
ACAAGGATGGTTACTGGAAA+TGG 0.366913 8_1:+23603576 Msa1185870:CDS
CTCCGTGCTGTCGCTGGTGC+TGG 0.374844 8_1:+23604578 Msa1185870:CDS
AGAAGGACAAGGATGGTTAC+TGG 0.382727 8_1:+23603570 Msa1185870:CDS
GGTGCTAAGTCTTTGTTTAA+GGG 0.383334 8_1:+23604539 Msa1185870:CDS
CTGGCAACTGATGGTATTGC+TGG 0.388315 8_1:+23603764 Msa1185870:CDS
ATGTACCAAAGGAGGTCATT+TGG 0.389033 8_1:+23602881 Msa1185870:CDS
TTGGCCTCAGGAGGTGCTGC+TGG 0.402435 8_1:+23603611 Msa1185870:CDS
ACAGTCACCGATTCCCTTGT+AGG 0.403293 8_1:-23603137 None:intergenic
CGCTGGTTACGACAAGTTAC+AGG 0.404370 8_1:+23604607 Msa1185870:CDS
TGTACCAAAGGAGGTCATTT+GGG 0.407077 8_1:+23602882 Msa1185870:CDS
AAGTCTTTGTTTAAGGGAGC+TGG 0.408660 8_1:+23604545 Msa1185870:CDS
CTTCGTTGTTGACTTTCTCA+TGG 0.411791 8_1:+23603006 Msa1185870:CDS
GCGTTACATGCTGGCATCAT+TGG 0.421080 8_1:-23602932 None:intergenic
CTTACCCAATTGACACAGTT+AGG 0.421944 8_1:+23604435 Msa1185870:CDS
GATAGTCACCATGGTTGATC+AGG 0.423356 8_1:+23602808 Msa1185870:exon
TTGCTAGCTTTGGTCTTGGA+TGG 0.425017 8_1:+23604384 Msa1185870:CDS
TTCTCCTAACTGTGTCAATT+GGG 0.432018 8_1:-23604439 None:intergenic
TGGTGGCTGCGCGAGTTTGT+TGG 0.432992 8_1:-23601311 None:intergenic
GAAATGGTTTGCTGGAAACT+TGG 0.433799 8_1:+23603592 Msa1185870:CDS
CAAGGGAGTAGACAAAGAAA+AGG 0.433806 8_1:-23603643 None:intergenic
AACTCCCAAATGACCTCCTT+TGG 0.434011 8_1:-23602886 None:intergenic
GGTTGATTTATTTGAATGAC+AGG 0.434373 8_1:+23604827 Msa1185870:three_prime_UTR
AAAAGCTTAATTCGTTCAAT+GGG 0.436520 8_1:-23603067 None:intergenic
CTTTGCATCATTTGCTAGAC+GGG 0.443087 8_1:-23603678 None:intergenic
GGTTACTGGAAATGGTTTGC+TGG 0.444417 8_1:+23603584 Msa1185870:CDS
AACATCCTCCGTGCTGTCGC+TGG 0.444804 8_1:+23604572 Msa1185870:CDS
ATCATTGGATACTGAAATGC+AGG 0.450957 8_1:-23602917 None:intergenic
AGAAGAATGATGATGACATC+TGG 0.454405 8_1:+23604458 Msa1185870:CDS
ACGAAGTTTCCTTTCTCAGC+AGG 0.458896 8_1:-23602989 None:intergenic
AGAGATCCAGTAAGGAGAAC+TGG 0.459442 8_1:-23603869 None:intergenic
TGTTCTTCATTTACCCACTA+AGG 0.465015 8_1:+23601391 Msa1185870:five_prime_UTR
AAGCGAACAACGGCCGATGA+AGG 0.465896 8_1:+23603163 Msa1185870:CDS
CAAAATGTTGCACGCCAGAC+TGG 0.467182 8_1:+23602851 Msa1185870:CDS
GTTGCAGCTCCTGCTGAGAA+AGG 0.469851 8_1:+23602980 Msa1185870:CDS
AGATGCTAGCCCAGCACCAT+TGG 0.475494 8_1:-23604414 None:intergenic
TCTCCTTACTGGATCTCTGC+AGG 0.476142 8_1:+23603874 Msa1185870:CDS
GGCTCATCACCAATGGTGCT+GGG 0.478677 8_1:+23604405 Msa1185870:CDS
TTGCGGTGTTACCTCTCCAT+AGG 0.487772 8_1:-23603195 None:intergenic
AGCTAGAACCAAGTGCTTTG+AGG 0.489452 8_1:-23601269 None:intergenic
GCTGGTGCTGGTGTGCTCGC+TGG 0.490336 8_1:+23604590 Msa1185870:CDS
GTGTATCGTGGTCTCTACTT+TGG 0.490767 8_1:+23603827 Msa1185870:CDS
CAGCTTTAATCATCTCATCC+TGG 0.491287 8_1:-23603099 None:intergenic
ATGTAATAGAATGAGAGGTT+AGG 0.492135 8_1:-23601368 None:intergenic
CAGGAGCTGCAACAAAGATA+GGG 0.493515 8_1:-23602970 None:intergenic
CCAACAAATCCTCAAGAATG+AGG 0.494163 8_1:+23604517 Msa1185870:CDS
TTCGTTGTTGACTTTCTCAT+GGG 0.496727 8_1:+23603007 Msa1185870:CDS
TTTGCTGGAAACTTGGCCTC+AGG 0.497193 8_1:+23603599 Msa1185870:CDS
AGTAAGGAGAACTGGCTTCA+AGG 0.497841 8_1:-23603861 None:intergenic
AGAACTCAACTAACCTGAGT+AGG 0.498897 8_1:-23603235 None:intergenic
CACCAGCACCAGCGACAGCA+CGG 0.499524 8_1:-23604580 None:intergenic
GTTGTTGACTTTCTCATGGG+TGG 0.499778 8_1:+23603010 Msa1185870:CDS
GATGCAAAGGCTGCAAAGAA+AGG 0.508474 8_1:+23603692 Msa1185870:CDS
CATCCGTTATTTCCCTACTC+AGG 0.512437 8_1:+23603222 Msa1185870:CDS
AGATGTTGAAACCACGGTAA+AGG 0.516865 8_1:-23603787 None:intergenic
CTCGGCAAGAAGTACGGATC+CGG 0.520238 8_1:+23604638 Msa1185870:CDS
TAACCTGAGTAGGGAAATAA+CGG 0.524143 8_1:-23603225 None:intergenic
CCTTTGCATCATTTGCTAGA+CGG 0.524216 8_1:-23603679 None:intergenic
TCTGAGCCCTACAAGGGAAT+CGG 0.525862 8_1:+23603130 Msa1185870:CDS
GCTGGAAACTTGGCCTCAGG+AGG 0.526095 8_1:+23603602 Msa1185870:CDS
TGGATACTGAAATGCAGGGT+TGG 0.528389 8_1:-23602912 None:intergenic
TAGACTTTCTGAGCCCTACA+AGG 0.529188 8_1:+23603123 Msa1185870:CDS
ATGAAGGTATTGTCTCCCTA+TGG 0.529311 8_1:+23603179 Msa1185870:CDS
ATAATGCTCGGCAAGAAGTA+CGG 0.537875 8_1:+23604632 Msa1185870:CDS
TGCGGTGTTACCTCTCCATA+GGG 0.537902 8_1:-23603194 None:intergenic
AAGGCTGCAAAGAAAGGTGC+AGG 0.538988 8_1:+23603698 Msa1185870:CDS
CAGTCACCGATTCCCTTGTA+GGG 0.546422 8_1:-23603136 None:intergenic
TAGGGAGACAATACCTTCAT+CGG 0.549059 8_1:-23603176 None:intergenic
GGTTTCAACATCTCTTGTGT+CGG 0.553553 8_1:+23603797 Msa1185870:CDS
TTGAGAATTGACAAGTCTTG+CGG 0.554260 8_1:+23604733 Msa1185870:three_prime_UTR
AAGGGAGTAGACAAAGAAAA+GGG 0.554552 8_1:-23603642 None:intergenic
ACTTAGCACCCTCATTCTTG+AGG 0.554699 8_1:-23604526 None:intergenic
TCGTTCAATGGGAGCTGCAG+CGG 0.558742 8_1:-23603056 None:intergenic
GAACTCAACTAACCTGAGTA+GGG 0.561724 8_1:-23603234 None:intergenic
GAAATAACGGATGACATTTG+CGG 0.563798 8_1:-23603212 None:intergenic
CAGGATGAGATGATTAAAGC+TGG 0.564426 8_1:+23603100 Msa1185870:CDS
GAACAATGTAATAGAATGAG+AGG 0.565315 8_1:-23601373 None:intergenic
CTGGTCTTTCTATGTACCAA+AGG 0.566545 8_1:+23602870 Msa1185870:CDS
GTTGTTGCAGCGTTACATGC+TGG 0.568330 8_1:-23602941 None:intergenic
GGTACATAGAAAGACCAGTC+TGG 0.568465 8_1:-23602865 None:intergenic
TCTCTCAGCCTCAAAGCACT+TGG 0.568758 8_1:+23601261 Msa1185870:five_prime_UTR
GACGGGTACGAGCATAGTCA+AGG 0.572808 8_1:-23603661 None:intergenic
CTTGGATGGCTCATCACCAA+TGG 0.573594 8_1:+23604398 Msa1185870:CDS
AAGTTACAGGTCATAATGCT+CGG 0.582137 8_1:+23604620 Msa1185870:CDS
GATTTGTTGGAATGCATCGA+AGG 0.585302 8_1:-23604504 None:intergenic
CATTCAAGGACTACTTCAAG+AGG 0.587339 8_1:+23603534 Msa1185870:CDS
GAAATGAAAATGAGTGTTGG+TGG 0.598283 8_1:-23601328 None:intergenic
AAAACAAAAGTATGAATCAG+AGG 0.599414 8_1:-23604684 None:intergenic
CCGTCTAGCAAATGATGCAA+AGG 0.603443 8_1:+23603679 Msa1185870:CDS
GAACCTGCAGAGATCCAGTA+AGG 0.606430 8_1:-23603877 None:intergenic
CAACAAATCCTCAAGAATGA+GGG 0.607876 8_1:+23604518 Msa1185870:CDS
AGGAGCTGCAACAAAGATAG+GGG 0.609070 8_1:-23602969 None:intergenic
GGCAAGAAGTACGGATCCGG+TGG 0.611623 8_1:+23604641 Msa1185870:CDS
AAGAAGACACTGGCAACTGA+TGG 0.618722 8_1:+23603755 Msa1185870:CDS
AATTTCAAGAAGGACAAGGA+TGG 0.620049 8_1:+23603563 Msa1185870:CDS
AGCACCAGCAGCACCTCCTG+AGG 0.623751 8_1:-23603615 None:intergenic
TTTCAATTTCAAGAAGGACA+AGG 0.627092 8_1:+23603559 Msa1185870:CDS
CACAAGAGATGTTGAAACCA+CGG 0.637635 8_1:-23603793 None:intergenic
GCTGCAAAGAAAGGTGCAGG+AGG 0.645640 8_1:+23603701 Msa1185870:CDS
ATTGTTCAGGATAGTCACCA+TGG 0.649135 8_1:+23602799 Msa1185870:intron
TAGGAAATGAAAATGAGTGT+TGG 0.653882 8_1:-23601331 None:intergenic
GGTATTGCTGGCCTTTACCG+TGG 0.654046 8_1:+23603776 Msa1185870:CDS
AGACTTTCTGAGCCCTACAA+GGG 0.654879 8_1:+23603124 Msa1185870:CDS
GTCGGAATCATTGTGTATCG+TGG 0.657764 8_1:+23603815 Msa1185870:CDS
GGTATTGTCTCCCTATGGAG+AGG 0.663367 8_1:+23603184 Msa1185870:CDS
AAAGCACTTGGTTCTAGCTG+CGG 0.666782 8_1:+23601273 Msa1185870:five_prime_UTR
ACGGGTACGAGCATAGTCAA+GGG 0.668625 8_1:-23603660 None:intergenic
GCAGGAGGAAGACAATTCGA+TGG 0.669093 8_1:+23603716 Msa1185870:CDS
GTCTTTCTATGTACCAAAGG+AGG 0.672579 8_1:+23602873 Msa1185870:CDS
GCGCTGAACCTGATCAACCA+TGG 0.682676 8_1:-23602816 None:intergenic
TGATGTCTACAAGAAGACAC+TGG 0.694165 8_1:+23603745 Msa1185870:CDS
TCATTGGATACTGAAATGCA+GGG 0.721142 8_1:-23602916 None:intergenic
CAGCACCAGCGACAGCACGG+AGG 0.743056 8_1:-23604577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCAATATGAAAAAA+TGG + chr8_1:23601611-23601630 Msa1185870:intron 10.0%
!!! ATTTTTTGATTAATCATTTA+GGG + chr8_1:23602188-23602207 Msa1185870:intron 10.0%
!! AAAAAACTAAAAAATCAAAA+GGG - chr8_1:23603270-23603289 None:intergenic 10.0%
!!! TAGTTTGATATTATTTTTTG+TGG - chr8_1:23602130-23602149 None:intergenic 15.0%
!! CTAAATGATTAATCAAAAAA+TGG - chr8_1:23602189-23602208 None:intergenic 15.0%
!!! CATTTTTTGATTAATCATTT+AGG + chr8_1:23602187-23602206 Msa1185870:intron 15.0%
!! GAAAAAACTAAAAAATCAAA+AGG - chr8_1:23603271-23603290 None:intergenic 15.0%
!!! TTTTTAGTTTTTTCAAATAG+AGG + chr8_1:23603277-23603296 Msa1185870:intron 15.0%
!!! TCAGAATATTTGATATTTTT+AGG + chr8_1:23604806-23604825 Msa1185870:three_prime_UTR 15.0%
!! CTAAAAAAACAACTAACAAA+AGG - chr8_1:23601434-23601453 None:intergenic 20.0%
!!! ACTCTTTGTTTTTTATGAAA+TGG + chr8_1:23601508-23601527 Msa1185870:intron 20.0%
!!! CTCTTTGTTTTTTATGAAAT+GGG + chr8_1:23601509-23601528 Msa1185870:intron 20.0%
!! CTAGAATTATGAATAATGAA+TGG + chr8_1:23601831-23601850 Msa1185870:intron 20.0%
!! ATGAAATATCAAATTCAATG+AGG - chr8_1:23601862-23601881 None:intergenic 20.0%
!! TTGTTTATGAACTAAATAAC+TGG + chr8_1:23602674-23602693 Msa1185870:intron 20.0%
!! CAAATAATGTTCAGAAATTA+AGG - chr8_1:23602763-23602782 None:intergenic 20.0%
!! TATAGAAATAGCTTATTCAT+AGG + chr8_1:23604208-23604227 Msa1185870:intron 20.0%
!! AAATATTCTGATCCAAAAAA+GGG - chr8_1:23604797-23604816 None:intergenic 20.0%
!!! CATCATAGTGTTTTTTTTTT+TGG + chr8_1:23604920-23604939 Msa1185870:three_prime_UTR 20.0%
!!! TTAGGTTTTGTTATTAACCT+AGG - chr8_1:23601353-23601372 None:intergenic 25.0%
! ACAAAAACAAAAACCTTAGT+GGG - chr8_1:23601407-23601426 None:intergenic 25.0%
! AACAAAAACAAAAACCTTAG+TGG - chr8_1:23601408-23601427 None:intergenic 25.0%
! TTCATACTGTTGAATTGAAT+TGG + chr8_1:23601461-23601480 Msa1185870:intron 25.0%
!!! TTTTTTTGTCACTCTTTTGA+TGG + chr8_1:23601547-23601566 Msa1185870:intron 25.0%
!! TTAGATCTTTTTGTGTATGA+TGG + chr8_1:23601652-23601671 Msa1185870:intron 25.0%
! GAATTATGAATAATGAATGG+TGG + chr8_1:23601834-23601853 Msa1185870:intron 25.0%
! GAAAAATACTCAAGAAAACA+TGG - chr8_1:23601952-23601971 None:intergenic 25.0%
!!! TGATTAATCATTTAGGGTTT+TGG + chr8_1:23602194-23602213 Msa1185870:intron 25.0%
! AAAAGCTTAATTCGTTCAAT+GGG - chr8_1:23603070-23603089 None:intergenic 25.0%
!!! TCATACTAAATAGAGTATTG+CGG - chr8_1:23603342-23603361 None:intergenic 25.0%
!!! ATTCTAGTTCATATCAGTAT+TGG + chr8_1:23603973-23603992 Msa1185870:intron 25.0%
!!! AAAATCAGAAGCAACTTTTT+TGG - chr8_1:23604284-23604303 None:intergenic 25.0%
! TGATCAAGAGACAATAAAAA+CGG - chr8_1:23604348-23604367 None:intergenic 25.0%
!!! TGGTGCTTAATTCTTTTTTT+CGG + chr8_1:23604661-23604680 Msa1185870:exon 25.0%
!! AAAACAAAAGTATGAATCAG+AGG - chr8_1:23604687-23604706 None:intergenic 25.0%
! CAAATATTCTGATCCAAAAA+AGG - chr8_1:23604798-23604817 None:intergenic 25.0%
! AACACTATGATGTAAAAACA+AGG - chr8_1:23604912-23604931 None:intergenic 25.0%
TAGGAAATGAAAATGAGTGT+TGG - chr8_1:23601334-23601353 None:intergenic 30.0%
! AACACTCATTTTCATTTCCT+AGG + chr8_1:23601333-23601352 Msa1185870:five_prime_UTR 30.0%
ATGTAATAGAATGAGAGGTT+AGG - chr8_1:23601371-23601390 None:intergenic 30.0%
GAACAATGTAATAGAATGAG+AGG - chr8_1:23601376-23601395 None:intergenic 30.0%
TGATGAGTGAATACTCAATT+TGG + chr8_1:23602059-23602078 Msa1185870:intron 30.0%
! ATGACAAGACAATTTTCTCA+GGG + chr8_1:23602084-23602103 Msa1185870:intron 30.0%
AGTCTCTGTTATAATGAATC+TGG + chr8_1:23602149-23602168 Msa1185870:intron 30.0%
GTCTCTGTTATAATGAATCT+GGG + chr8_1:23602150-23602169 Msa1185870:intron 30.0%
CAATGTTAGAGTCATGTTTA+TGG - chr8_1:23602354-23602373 None:intergenic 30.0%
AACATGACTCTAACATTGTT+AGG + chr8_1:23602356-23602375 Msa1185870:intron 30.0%
AAATGTCAGAGTCATGTTTA+TGG - chr8_1:23602419-23602438 None:intergenic 30.0%
AAATGTCAGAGTCATGTTTA+TGG - chr8_1:23602419-23602438 None:intergenic 30.0%
CAATATCAGAGTCATGTTTA+TGG - chr8_1:23602639-23602658 None:intergenic 30.0%
AACATGACTCTGATATTGTT+AGG + chr8_1:23602641-23602660 Msa1185870:intron 30.0%
! GTTTTTCTGTTTGTTCTGTT+AGG + chr8_1:23602729-23602748 Msa1185870:intron 30.0%
! TTATGTAACTTGCATTGTTC+AGG + chr8_1:23602786-23602805 Msa1185870:intron 30.0%
! CAACATTTTGAACGAGATTA+GGG - chr8_1:23602841-23602860 None:intergenic 30.0%
CAAAAGCTTAATTCGTTCAA+TGG - chr8_1:23603071-23603090 None:intergenic 30.0%
! TAAGCTTTTGATACAAAACC+AGG + chr8_1:23603081-23603100 Msa1185870:CDS 30.0%
!! TATGAAGTGTTGTCAAATAG+TGG + chr8_1:23603357-23603376 Msa1185870:intron 30.0%
! TGTCTCTTAACAACTCTTTT+TGG + chr8_1:23603455-23603474 Msa1185870:intron 30.0%
TTTGTGGTTCAAAATCTTCT+AGG + chr8_1:23603499-23603518 Msa1185870:intron 30.0%
TTTCAATTTCAAGAAGGACA+AGG + chr8_1:23603559-23603578 Msa1185870:CDS 30.0%
ATAAAATGACACAGGAGATA+AGG - chr8_1:23603908-23603927 None:intergenic 30.0%
GTTAGTCGAACTAAAGAATA+TGG - chr8_1:23603935-23603954 None:intergenic 30.0%
GAATACATATCAGCAAAGTT+AGG - chr8_1:23603957-23603976 None:intergenic 30.0%
!! ATCAGTATTGGTGTTATTGA+AGG + chr8_1:23603985-23604004 Msa1185870:intron 30.0%
!! CTTGTTTTCAGAAAGAATCA+TGG - chr8_1:23604143-23604162 None:intergenic 30.0%
AAAAAAGAATTAAGCACCAC+CGG - chr8_1:23604660-23604679 None:intergenic 30.0%
!!! AATGATCCTATACCCTTTTT+TGG + chr8_1:23604782-23604801 Msa1185870:three_prime_UTR 30.0%
! GGTTGATTTATTTGAATGAC+AGG + chr8_1:23604827-23604846 Msa1185870:three_prime_UTR 30.0%
GAAACTCAAATCAGACAAAA+TGG - chr8_1:23604875-23604894 None:intergenic 30.0%
!! GAAATGAAAATGAGTGTTGG+TGG - chr8_1:23601331-23601350 None:intergenic 35.0%
TGTTCTTCATTTACCCACTA+AGG + chr8_1:23601391-23601410 Msa1185870:five_prime_UTR 35.0%
!! GTAGTGTCTTGTTTGTTCAA+GGG + chr8_1:23601915-23601934 Msa1185870:intron 35.0%
!! TAGTGTCTTGTTTGTTCAAG+GGG + chr8_1:23601916-23601935 Msa1185870:intron 35.0%
! TCTTGAGTATTTTTCCAGCT+TGG + chr8_1:23601957-23601976 Msa1185870:intron 35.0%
! CATGACAAGACAATTTTCTC+AGG + chr8_1:23602083-23602102 Msa1185870:intron 35.0%
GAGTTAGAACTTCTGAACTA+TGG + chr8_1:23602278-23602297 Msa1185870:intron 35.0%
CAATGTCAGAGTCATGTTTA+TGG - chr8_1:23602509-23602528 None:intergenic 35.0%
AACATGACTCTGACATTGTT+AGG + chr8_1:23602511-23602530 Msa1185870:intron 35.0%
CAATGTCAGAGTCATGTTTA+TGG - chr8_1:23602509-23602528 None:intergenic 35.0%
AACATGACTCTGACATTGTT+AGG + chr8_1:23602511-23602530 Msa1185870:intron 35.0%
! GCAACATTTTGAACGAGATT+AGG - chr8_1:23602842-23602861 None:intergenic 35.0%
TCATTGGATACTGAAATGCA+GGG - chr8_1:23602919-23602938 None:intergenic 35.0%
ATCATTGGATACTGAAATGC+AGG - chr8_1:23602920-23602939 None:intergenic 35.0%
!! TTCGTTGTTGACTTTCTCAT+GGG + chr8_1:23603007-23603026 Msa1185870:CDS 35.0%
!! TGACTGTTTTAAGCGAACAA+CGG + chr8_1:23603153-23603172 Msa1185870:CDS 35.0%
!! GAAATAACGGATGACATTTG+CGG - chr8_1:23603215-23603234 None:intergenic 35.0%
TAACCTGAGTAGGGAAATAA+CGG - chr8_1:23603228-23603247 None:intergenic 35.0%
CGATCTACAATTGACAACAA+TGG + chr8_1:23603422-23603441 Msa1185870:intron 35.0%
! GAGGCTTTTCAATTTCAAGA+AGG + chr8_1:23603553-23603572 Msa1185870:CDS 35.0%
AATTTCAAGAAGGACAAGGA+TGG + chr8_1:23603563-23603582 Msa1185870:CDS 35.0%
AAGGGAGTAGACAAAGAAAA+GGG - chr8_1:23603645-23603664 None:intergenic 35.0%
ATGGTCGAATAAAATGACAC+AGG - chr8_1:23603916-23603935 None:intergenic 35.0%
! ATCAGCGGTTTTTACAAGAT+CGG - chr8_1:23604072-23604091 None:intergenic 35.0%
GCTTATAGACATGTTATCAG+CGG - chr8_1:23604087-23604106 None:intergenic 35.0%
AAAGAATCATGGAGAGCTTA+TGG - chr8_1:23604132-23604151 None:intergenic 35.0%
AAAAGTTAGAACTCAGACTC+AGG - chr8_1:23604311-23604330 None:intergenic 35.0%
TATTGTCTCTTGATCATTGC+AGG + chr8_1:23604352-23604371 Msa1185870:intron 35.0%
! GATAGTTTCTTTGCTAGCTT+TGG + chr8_1:23604374-23604393 Msa1185870:CDS 35.0%
TTCTCCTAACTGTGTCAATT+GGG - chr8_1:23604442-23604461 None:intergenic 35.0%
! AGAAGAATGATGATGACATC+TGG + chr8_1:23604458-23604477 Msa1185870:CDS 35.0%
CAACAAATCCTCAAGAATGA+GGG + chr8_1:23604518-23604537 Msa1185870:CDS 35.0%
! GGTGCTAAGTCTTTGTTTAA+GGG + chr8_1:23604539-23604558 Msa1185870:CDS 35.0%
AAGTTACAGGTCATAATGCT+CGG + chr8_1:23604620-23604639 Msa1185870:CDS 35.0%
TTGAGAATTGACAAGTCTTG+CGG + chr8_1:23604733-23604752 Msa1185870:three_prime_UTR 35.0%
! TCTGATCCAAAAAAGGGTAT+AGG - chr8_1:23604791-23604810 None:intergenic 35.0%
!! CGTAGTGTCTTGTTTGTTCA+AGG + chr8_1:23601914-23601933 Msa1185870:intron 40.0%
AATTCAGACAGAATCCAAGC+TGG - chr8_1:23601974-23601993 None:intergenic 40.0%
ATTGTTCAGGATAGTCACCA+TGG + chr8_1:23602799-23602818 Msa1185870:intron 40.0%
! CTGGTCTTTCTATGTACCAA+AGG + chr8_1:23602870-23602889 Msa1185870:CDS 40.0%
GTCTTTCTATGTACCAAAGG+AGG + chr8_1:23602873-23602892 Msa1185870:CDS 40.0%
ATGTACCAAAGGAGGTCATT+TGG + chr8_1:23602881-23602900 Msa1185870:CDS 40.0%
TGTACCAAAGGAGGTCATTT+GGG + chr8_1:23602882-23602901 Msa1185870:CDS 40.0%
!! CTTCGTTGTTGACTTTCTCA+TGG + chr8_1:23603006-23603025 Msa1185870:CDS 40.0%
! CAGCTTTAATCATCTCATCC+TGG - chr8_1:23603102-23603121 None:intergenic 40.0%
CAGGATGAGATGATTAAAGC+TGG + chr8_1:23603100-23603119 Msa1185870:CDS 40.0%
TAGGGAGACAATACCTTCAT+CGG - chr8_1:23603179-23603198 None:intergenic 40.0%
!! ATGAAGGTATTGTCTCCCTA+TGG + chr8_1:23603179-23603198 Msa1185870:CDS 40.0%
GAACTCAACTAACCTGAGTA+GGG - chr8_1:23603237-23603256 None:intergenic 40.0%
AGAACTCAACTAACCTGAGT+AGG - chr8_1:23603238-23603257 None:intergenic 40.0%
!! GAAGTGTTGTCAAATAGTGG+CGG + chr8_1:23603360-23603379 Msa1185870:intron 40.0%
TGCATGTGATGCTAACTTTG+TGG + chr8_1:23603483-23603502 Msa1185870:intron 40.0%
!! GGCTTTGAACTTTGCATTCA+AGG + chr8_1:23603520-23603539 Msa1185870:intron 40.0%
CATTCAAGGACTACTTCAAG+AGG + chr8_1:23603534-23603553 Msa1185870:CDS 40.0%
ACAAGGATGGTTACTGGAAA+TGG + chr8_1:23603576-23603595 Msa1185870:CDS 40.0%
!! GAAATGGTTTGCTGGAAACT+TGG + chr8_1:23603592-23603611 Msa1185870:CDS 40.0%
CAAGGGAGTAGACAAAGAAA+AGG - chr8_1:23603646-23603665 None:intergenic 40.0%
! CTTTGCATCATTTGCTAGAC+GGG - chr8_1:23603681-23603700 None:intergenic 40.0%
! CCTTTGCATCATTTGCTAGA+CGG - chr8_1:23603682-23603701 None:intergenic 40.0%
TGATGTCTACAAGAAGACAC+TGG + chr8_1:23603745-23603764 Msa1185870:CDS 40.0%
AGATGTTGAAACCACGGTAA+AGG - chr8_1:23603790-23603809 None:intergenic 40.0%
CACAAGAGATGTTGAAACCA+CGG - chr8_1:23603796-23603815 None:intergenic 40.0%
GGTTTCAACATCTCTTGTGT+CGG + chr8_1:23603797-23603816 Msa1185870:CDS 40.0%
ATCATGGAGAGCTTATGGAA+TGG - chr8_1:23604127-23604146 None:intergenic 40.0%
!! TTCTTTGCTAGCTTTGGTCT+TGG + chr8_1:23604380-23604399 Msa1185870:CDS 40.0%
CTTACCCAATTGACACAGTT+AGG + chr8_1:23604435-23604454 Msa1185870:CDS 40.0%
CTTCTCCTAACTGTGTCAAT+TGG - chr8_1:23604443-23604462 None:intergenic 40.0%
!! GATTTGTTGGAATGCATCGA+AGG - chr8_1:23604507-23604526 None:intergenic 40.0%
CCTCATTCTTGAGGATTTGT+TGG - chr8_1:23604520-23604539 None:intergenic 40.0%
CCAACAAATCCTCAAGAATG+AGG + chr8_1:23604517-23604536 Msa1185870:CDS 40.0%
! GGGTGCTAAGTCTTTGTTTA+AGG + chr8_1:23604538-23604557 Msa1185870:CDS 40.0%
! AAGTCTTTGTTTAAGGGAGC+TGG + chr8_1:23604545-23604564 Msa1185870:CDS 40.0%
ATAATGCTCGGCAAGAAGTA+CGG + chr8_1:23604632-23604651 Msa1185870:CDS 40.0%
AGCTAGAACCAAGTGCTTTG+AGG - chr8_1:23601272-23601291 None:intergenic 45.0%
!! AAAGCACTTGGTTCTAGCTG+CGG + chr8_1:23601273-23601292 Msa1185870:five_prime_UTR 45.0%
GATAGTCACCATGGTTGATC+AGG + chr8_1:23602808-23602827 Msa1185870:exon 45.0%
GGTACATAGAAAGACCAGTC+TGG - chr8_1:23602868-23602887 None:intergenic 45.0%
AACTCCCAAATGACCTCCTT+TGG - chr8_1:23602889-23602908 None:intergenic 45.0%
TGGATACTGAAATGCAGGGT+TGG - chr8_1:23602915-23602934 None:intergenic 45.0%
AGGAGCTGCAACAAAGATAG+GGG - chr8_1:23602972-23602991 None:intergenic 45.0%
CAGGAGCTGCAACAAAGATA+GGG - chr8_1:23602973-23602992 None:intergenic 45.0%
ACGAAGTTTCCTTTCTCAGC+AGG - chr8_1:23602992-23603011 None:intergenic 45.0%
!! GTTGTTGACTTTCTCATGGG+TGG + chr8_1:23603010-23603029 Msa1185870:CDS 45.0%
TAGACTTTCTGAGCCCTACA+AGG + chr8_1:23603123-23603142 Msa1185870:CDS 45.0%
AGACTTTCTGAGCCCTACAA+GGG + chr8_1:23603124-23603143 Msa1185870:CDS 45.0%
! CATCCGTTATTTCCCTACTC+AGG + chr8_1:23603222-23603241 Msa1185870:CDS 45.0%
AGAAGGACAAGGATGGTTAC+TGG + chr8_1:23603570-23603589 Msa1185870:CDS 45.0%
! GGTTACTGGAAATGGTTTGC+TGG + chr8_1:23603584-23603603 Msa1185870:CDS 45.0%
CCGTCTAGCAAATGATGCAA+AGG + chr8_1:23603679-23603698 Msa1185870:CDS 45.0%
GATGCAAAGGCTGCAAAGAA+AGG + chr8_1:23603692-23603711 Msa1185870:CDS 45.0%
AAGAAGACACTGGCAACTGA+TGG + chr8_1:23603755-23603774 Msa1185870:CDS 45.0%
GTCGGAATCATTGTGTATCG+TGG + chr8_1:23603815-23603834 Msa1185870:CDS 45.0%
GTGTATCGTGGTCTCTACTT+TGG + chr8_1:23603827-23603846 Msa1185870:CDS 45.0%
! AGTAAGGAGAACTGGCTTCA+AGG - chr8_1:23603864-23603883 None:intergenic 45.0%
TTGAAGCCAGTTCTCCTTAC+TGG + chr8_1:23603863-23603882 Msa1185870:CDS 45.0%
AGAGATCCAGTAAGGAGAAC+TGG - chr8_1:23603872-23603891 None:intergenic 45.0%
!! TTGCTAGCTTTGGTCTTGGA+TGG + chr8_1:23604384-23604403 Msa1185870:CDS 45.0%
ACTTAGCACCCTCATTCTTG+AGG - chr8_1:23604529-23604548 None:intergenic 45.0%
! TCTCTCAGCCTCAAAGCACT+TGG + chr8_1:23601261-23601280 Msa1185870:five_prime_UTR 50.0%
!! CGCGAGTTTGTTGGAGACTT+TGG - chr8_1:23601305-23601324 None:intergenic 50.0%
CAAAATGTTGCACGCCAGAC+TGG + chr8_1:23602851-23602870 Msa1185870:CDS 50.0%
GCGTTACATGCTGGCATCAT+TGG - chr8_1:23602935-23602954 None:intergenic 50.0%
GTTGTTGCAGCGTTACATGC+TGG - chr8_1:23602944-23602963 None:intergenic 50.0%
GCAGGAGCTGCAACAAAGAT+AGG - chr8_1:23602974-23602993 None:intergenic 50.0%
TCTGAGCCCTACAAGGGAAT+CGG + chr8_1:23603130-23603149 Msa1185870:CDS 50.0%
!! CAGTCACCGATTCCCTTGTA+GGG - chr8_1:23603139-23603158 None:intergenic 50.0%
!! ACAGTCACCGATTCCCTTGT+AGG - chr8_1:23603140-23603159 None:intergenic 50.0%
GGTATTGTCTCCCTATGGAG+AGG + chr8_1:23603184-23603203 Msa1185870:CDS 50.0%
!! TGCGGTGTTACCTCTCCATA+GGG - chr8_1:23603197-23603216 None:intergenic 50.0%
!! TTGCGGTGTTACCTCTCCAT+AGG - chr8_1:23603198-23603217 None:intergenic 50.0%
TTGTCAAATAGTGGCGGCAC+TGG + chr8_1:23603366-23603385 Msa1185870:intron 50.0%
TGTCAAATAGTGGCGGCACT+GGG + chr8_1:23603367-23603386 Msa1185870:intron 50.0%
TTTGCTGGAAACTTGGCCTC+AGG + chr8_1:23603599-23603618 Msa1185870:CDS 50.0%
ACGGGTACGAGCATAGTCAA+GGG - chr8_1:23603663-23603682 None:intergenic 50.0%
! AAGGCTGCAAAGAAAGGTGC+AGG + chr8_1:23603698-23603717 Msa1185870:CDS 50.0%
GCAGGAGGAAGACAATTCGA+TGG + chr8_1:23603716-23603735 Msa1185870:CDS 50.0%
CTGGCAACTGATGGTATTGC+TGG + chr8_1:23603764-23603783 Msa1185870:CDS 50.0%
TCTCCTTACTGGATCTCTGC+AGG + chr8_1:23603874-23603893 Msa1185870:CDS 50.0%
GAACCTGCAGAGATCCAGTA+AGG - chr8_1:23603880-23603899 None:intergenic 50.0%
CTTGGATGGCTCATCACCAA+TGG + chr8_1:23604398-23604417 Msa1185870:CDS 50.0%
! CGCTGGTTACGACAAGTTAC+AGG + chr8_1:23604607-23604626 Msa1185870:CDS 50.0%
GCGCTGAACCTGATCAACCA+TGG - chr8_1:23602819-23602838 None:intergenic 55.0%
GTTGCAGCTCCTGCTGAGAA+AGG + chr8_1:23602980-23602999 Msa1185870:CDS 55.0%
TCGTTCAATGGGAGCTGCAG+CGG - chr8_1:23603059-23603078 None:intergenic 55.0%
AAGCGAACAACGGCCGATGA+AGG + chr8_1:23603163-23603182 Msa1185870:CDS 55.0%
GACGGGTACGAGCATAGTCA+AGG - chr8_1:23603664-23603683 None:intergenic 55.0%
! GCTGCAAAGAAAGGTGCAGG+AGG + chr8_1:23603701-23603720 Msa1185870:CDS 55.0%
!! GGTATTGCTGGCCTTTACCG+TGG + chr8_1:23603776-23603795 Msa1185870:CDS 55.0%
TGGCTCATCACCAATGGTGC+TGG + chr8_1:23604404-23604423 Msa1185870:CDS 55.0%
GGCTCATCACCAATGGTGCT+GGG + chr8_1:23604405-23604424 Msa1185870:CDS 55.0%
AGATGCTAGCCCAGCACCAT+TGG - chr8_1:23604417-23604436 None:intergenic 55.0%
! CTCGGCAAGAAGTACGGATC+CGG + chr8_1:23604638-23604657 Msa1185870:CDS 55.0%
TGGTGGCTGCGCGAGTTTGT+TGG - chr8_1:23601314-23601333 None:intergenic 60.0%
GCTGGAAACTTGGCCTCAGG+AGG + chr8_1:23603602-23603621 Msa1185870:CDS 60.0%
AACATCCTCCGTGCTGTCGC+TGG + chr8_1:23604572-23604591 Msa1185870:CDS 60.0%
! GGCAAGAAGTACGGATCCGG+TGG + chr8_1:23604641-23604660 Msa1185870:CDS 60.0%
!! TTGGCCTCAGGAGGTGCTGC+TGG + chr8_1:23603611-23603630 Msa1185870:CDS 65.0%
AGCACCAGCAGCACCTCCTG+AGG - chr8_1:23603618-23603637 None:intergenic 65.0%
CACCAGCACCAGCGACAGCA+CGG - chr8_1:23604583-23604602 None:intergenic 65.0%
CAGCACCAGCGACAGCACGG+AGG - chr8_1:23604580-23604599 None:intergenic 70.0%
CTCCGTGCTGTCGCTGGTGC+TGG + chr8_1:23604578-23604597 Msa1185870:CDS 70.0%
!! GCTGGTGCTGGTGTGCTCGC+TGG + chr8_1:23604590-23604609 Msa1185870:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 23601258 23604992 23601258 ID=Msa1185870;Name=Msa1185870
chr8_1 mRNA 23601258 23604992 23601258 ID=Msa1185870-mRNA-1;Parent=Msa1185870;Name=Msa1185870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=165|1|1|1|0.66|0.5|4|322|365
chr8_1 exon 23601258 23601412 23601258 ID=Msa1185870-mRNA-1:exon:8598;Parent=Msa1185870-mRNA-1
chr8_1 exon 23602808 23603243 23602808 ID=Msa1185870-mRNA-1:exon:8599;Parent=Msa1185870-mRNA-1
chr8_1 exon 23603521 23603895 23603521 ID=Msa1185870-mRNA-1:exon:8600;Parent=Msa1185870-mRNA-1
chr8_1 exon 23604374 23604992 23604374 ID=Msa1185870-mRNA-1:exon:8601;Parent=Msa1185870-mRNA-1
chr8_1 five_prime_UTR 23601258 23601412 23601258 ID=Msa1185870-mRNA-1:five_prime_utr;Parent=Msa1185870-mRNA-1
chr8_1 five_prime_UTR 23602808 23602817 23602808 ID=Msa1185870-mRNA-1:five_prime_utr;Parent=Msa1185870-mRNA-1
chr8_1 CDS 23602818 23603243 23602818 ID=Msa1185870-mRNA-1:cds;Parent=Msa1185870-mRNA-1
chr8_1 CDS 23603521 23603895 23603521 ID=Msa1185870-mRNA-1:cds;Parent=Msa1185870-mRNA-1
chr8_1 CDS 23604374 23604670 23604374 ID=Msa1185870-mRNA-1:cds;Parent=Msa1185870-mRNA-1
chr8_1 three_prime_UTR 23604671 23604992 23604671 ID=Msa1185870-mRNA-1:three_prime_utr;Parent=Msa1185870-mRNA-1
Gene Sequence

>Msa1185870

ATGGTTGATCAGGTTCAGCGCCCTAATCTCGTTCAAAATGTTGCACGCCAGACTGGTCTTTCTATGTACCAAAGGAGGTCATTTGGGAGTTACTCCAACCCTGCATTTCAGTATCCAATGATGCCAGCATGTAACGCTGCAACAACAGCTTCCCCTATCTTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTCGTTGTTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTATCAAAAACCGCTGCAGCTCCCATTGAACGAATTAAGCTTTTGATACAAAACCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTACAAGGGAATCGGTGACTGTTTTAAGCGAACAACGGCCGATGAAGGTATTGTCTCCCTATGGAGAGGTAACACCGCAAATGTCATCCGTTATTTCCCTACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCTTCATCCCTTTTCTTTGTCTACTCCCTTGACTATGCTCGTACCCGTCTAGCAAATGATGCAAAGGCTGCAAAGAAAGGTGCAGGAGGAAGACAATTCGATGGTCTTATTGATGTCTACAAGAAGACACTGGCAACTGATGGTATTGCTGGCCTTTACCGTGGTTTCAACATCTCTTGTGTCGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCTTGAAGCCAGTTCTCCTTACTGGATCTCTGCAGGATAGTTTCTTTGCTAGCTTTGGTCTTGGATGGCTCATCACCAATGGTGCTGGGCTAGCATCTTACCCAATTGACACAGTTAGGAGAAGAATGATGATGACATCTGGAGAAGCTGTTAAGTACAAGAGCTCCTTCGATGCATTCCAACAAATCCTCAAGAATGAGGGTGCTAAGTCTTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTCGCTGGTGCTGGTGTGCTCGCTGGTTACGACAAGTTACAGGTCATAATGCTCGGCAAGAAGTACGGATCCGGTGGTGCTTAA
Protein sequence

>Msa1185870

MVDQVQRPNLVQNVARQTGLSMYQRRSFGSYSNPAFQYPMMPACNAATTASPIFVAAPAEKGNFVVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTTADEGIVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGAGGRQFDGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFQQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA*