Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442160 | sp|F4JT76|VPS54_ARATH | 71.681 | 226 | 62 | 2 | 56 | 280 | 75 | 299 | 5.28e-99 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442160 | A0A072V8X8 | 99.286 | 280 | 2 | 0 | 1 | 280 | 1 | 280 | 0.0 | 564 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033160 | Msa1442160 | 0.840604 | 7.865761e-58 | -8.615850e-47 |
| Msa0044240 | Msa1442160 | 0.815578 | 8.605722e-52 | -8.615850e-47 |
| Msa0046660 | Msa1442160 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0054730 | Msa1442160 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0058210 | Msa1442160 | 0.832517 | 9.034059e-56 | -8.615850e-47 |
| Msa0058390 | Msa1442160 | 0.807319 | 5.355771e-50 | -8.615850e-47 |
| Msa0090770 | Msa1442160 | 0.856628 | 2.828241e-62 | -8.615850e-47 |
| Msa1365700 | Msa1442160 | 0.832905 | 7.237603e-56 | -8.615850e-47 |
| Msa1384820 | Msa1442160 | 0.853375 | 2.490696e-61 | -8.615850e-47 |
| Msa1396750 | Msa1442160 | 0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa1442160 | Msa1453780 | 0.889097 | 3.284472e-73 | -8.615850e-47 |
| Msa0607340 | Msa1442160 | 0.840335 | 9.252141e-58 | -8.615850e-47 |
| Msa0661190 | Msa1442160 | 0.800569 | 1.355429e-48 | -8.615850e-47 |
| Msa0707000 | Msa1442160 | 0.847013 | 1.512955e-59 | -8.615850e-47 |
| Msa0138560 | Msa1442160 | 0.825871 | 3.700114e-54 | -8.615850e-47 |
| Msa0167210 | Msa1442160 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0183640 | Msa1442160 | 0.880461 | 5.385397e-70 | -8.615850e-47 |
| Msa0184950 | Msa1442160 | 0.839582 | 1.453750e-57 | -8.615850e-47 |
| Msa1249640 | Msa1442160 | 0.816053 | 6.743825e-52 | -8.615850e-47 |
| Msa1254370 | Msa1442160 | 0.814749 | 1.314793e-51 | -8.615850e-47 |
| Msa1279490 | Msa1442160 | 0.835835 | 1.331529e-56 | -8.615850e-47 |
| Msa1300950 | Msa1442160 | 0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa1307660 | Msa1442160 | 0.834033 | 3.787794e-56 | -8.615850e-47 |
| Msa0376450 | Msa1442160 | 0.839222 | 1.803393e-57 | -8.615850e-47 |
| Msa0425120 | Msa1442160 | 0.838818 | 2.293340e-57 | -8.615850e-47 |
| Msa0471720 | Msa1442160 | 0.836787 | 7.625257e-57 | -8.615850e-47 |
| Msa1040110 | Msa1442160 | 0.861801 | 7.946785e-64 | -8.615850e-47 |
| Msa1083420 | Msa1442160 | 0.833899 | 4.090738e-56 | -8.615850e-47 |
| Msa0247970 | Msa1442160 | 0.855336 | 6.755818e-62 | -8.615850e-47 |
| Msa0259860 | Msa1442160 | 0.805550 | 1.264648e-49 | -8.615850e-47 |
| Msa0310900 | Msa1442160 | 0.808821 | 2.565656e-50 | -8.615850e-47 |
| Msa0328420 | Msa1442160 | 0.835951 | 1.244435e-56 | -8.615850e-47 |
| Msa1128170 | Msa1442160 | 0.825002 | 5.943732e-54 | -8.615850e-47 |
| Msa1200880 | Msa1442160 | 0.809205 | 2.123052e-50 | -8.615850e-47 |
| Msa0516510 | Msa1442160 | 0.842385 | 2.670439e-58 | -8.615850e-47 |
| Msa0539010 | Msa1442160 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
| Msa0865990 | Msa1442160 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0967650 | Msa1442160 | 0.837229 | 5.879255e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442160 | MtrunA17_Chr2g0303321 | 99.286 | 280 | 2 | 0 | 1 | 280 | 1 | 280 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442160 | AT4G19490.1 | 71.681 | 226 | 62 | 2 | 56 | 280 | 75 | 299 | 5.37e-100 | 315 |
| Msa1442160 | AT4G19490.2 | 71.681 | 226 | 62 | 2 | 56 | 280 | 75 | 299 | 5.37e-100 | 315 |
Find 100 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATTGTTGAAGAGTCTT+TGG | 0.260294 | tig0029813:+1412 | None:intergenic |
| TGGGGAATCCATTTGGATTA+TGG | 0.262946 | tig0029813:+1535 | None:intergenic |
| GGAGGAGATAGGGGTGAATT+CGG | 0.274597 | tig0029813:+1337 | None:intergenic |
| TGAGGATTGAGGAGAGAGAT+TGG | 0.289732 | tig0029813:+1393 | None:intergenic |
| GGTGAGTTGCAGGATCTTAA+TGG | 0.294745 | tig0029813:-957 | Msa1442160:CDS |
| GTGGATTTGGTGGAGGAGAT+AGG | 0.304954 | tig0029813:+1326 | None:intergenic |
| GAGAGGATTGTTGAGGATTG+AGG | 0.340912 | tig0029813:+1382 | None:intergenic |
| GGTGAGAGTGGAGGTGGATT+TGG | 0.344556 | tig0029813:+1313 | None:intergenic |
| AGCACTCTCTGCTCTCAAAT+TGG | 0.345395 | tig0029813:-769 | Msa1442160:intron |
| GAGGAGATAGGGGTGAATTC+GGG | 0.352076 | tig0029813:+1338 | None:intergenic |
| AAAATCTTGTTTGAAGTAAA+GGG | 0.374771 | tig0029813:+1139 | None:intergenic |
| AGGCAGATTCAGTTACTTAA+TGG | 0.381632 | tig0029813:-852 | Msa1442160:CDS |
| ATGGGAAATGTGAATGAAAA+AGG | 0.384676 | tig0029813:+1650 | None:intergenic |
| GAGAAGGTGGGGAATCCATT+TGG | 0.389977 | tig0029813:+1528 | None:intergenic |
| TCTCGTTGTTAGCGTGTTTG+CGG | 0.400868 | tig0029813:+1228 | None:intergenic |
| TGATGTGGTTGAACTTCATC+TGG | 0.402700 | tig0029813:-1024 | Msa1442160:CDS |
| TGAAGCGCAGGGTGAGTTGC+AGG | 0.405088 | tig0029813:-967 | Msa1442160:CDS |
| TAGGCTTATTGATTCCGATT+TGG | 0.406044 | tig0029813:-886 | Msa1442160:CDS |
| TGGATTTGGTGGAGGAGATA+GGG | 0.415628 | tig0029813:+1327 | None:intergenic |
| GGGGTGTAAGGGGAGATGGG+GGG | 0.416570 | tig0029813:+1616 | None:intergenic |
| GAAAATCTTGTTTGAAGTAA+AGG | 0.417029 | tig0029813:+1138 | None:intergenic |
| GTCGTCCTTCTTTGAAGCGC+AGG | 0.427748 | tig0029813:-979 | Msa1442160:CDS |
| GAAGAGTCTTTGGAGAAAGA+TGG | 0.434679 | tig0029813:+1422 | None:intergenic |
| GGTTGAACTTCATCTGGTTA+AGG | 0.438247 | tig0029813:-1018 | Msa1442160:CDS |
| AGAGATGAGAGAGTTGAGGT+TGG | 0.442022 | tig0029813:+1691 | None:intergenic |
| TGGAGGTTGTGCGGTTGAGA+TGG | 0.449751 | tig0029813:+1465 | None:intergenic |
| TTTGGAGAAAGATGGAGAAG+AGG | 0.449937 | tig0029813:+1430 | None:intergenic |
| GGAGGTTGTGCGGTTGAGAT+GGG | 0.452498 | tig0029813:+1466 | None:intergenic |
| GAAAGATGGAGAAGAGGTTG+AGG | 0.452974 | tig0029813:+1436 | None:intergenic |
| GTGAGTTGCAGGATCTTAAT+GGG | 0.454099 | tig0029813:-956 | Msa1442160:CDS |
| CCCCACGACGGTTGCTGAGA+AGG | 0.455534 | tig0029813:+1512 | None:intergenic |
| GAGAGTGGAGGTGGATTTGG+TGG | 0.459358 | tig0029813:+1316 | None:intergenic |
| ACACGCGACGAGTGCTTCTC+CGG | 0.464490 | tig0029813:+1178 | None:intergenic |
| GTGAATTGAAGGATACGGTT+AGG | 0.471624 | tig0029813:-905 | Msa1442160:CDS |
| CCTCGCAGACTCAACCAAAT+CGG | 0.473104 | tig0029813:+872 | None:intergenic |
| ACCTTCTCAGCAACCGTCGT+GGG | 0.474218 | tig0029813:-1513 | Msa1442160:CDS |
| GTTGAGATGGGTGGTGGAGA+AGG | 0.474278 | tig0029813:+1478 | None:intergenic |
| ATCTCCGACGACGGCGGTGC+CGG | 0.474716 | tig0029813:-1197 | Msa1442160:CDS |
| CTCACCCTGCGCTTCAAAGA+AGG | 0.477851 | tig0029813:+974 | None:intergenic |
| GATAGGGGTGAATTCGGGAG+AGG | 0.482041 | tig0029813:+1343 | None:intergenic |
| TTCGAGGATTCGTGAATTGA+AGG | 0.485297 | tig0029813:-916 | Msa1442160:CDS |
| AGAGAGATAAGGAAGGAAAT+CGG | 0.490199 | tig0029813:+1286 | None:intergenic |
| GAGATTGTGGTGGAAGAGAG+AGG | 0.492710 | tig0029813:+1365 | None:intergenic |
| GGGAGTTAGTTAGAGGACAT+TGG | 0.493952 | tig0029813:+1561 | None:intergenic |
| GTTGAGGTTGGTTTGCAGTG+AGG | 0.494359 | tig0029813:+1703 | None:intergenic |
| GGAATCCATTTGGATTATGG+AGG | 0.496213 | tig0029813:+1538 | None:intergenic |
| ATCCATTTGGATTATGGAGG+GGG | 0.498018 | tig0029813:+1541 | None:intergenic |
| GAGGTTGGTTTGCAGTGAGG+AGG | 0.499440 | tig0029813:+1706 | None:intergenic |
| AGAAGAGGTTGAGGAAGATG+TGG | 0.500128 | tig0029813:+1445 | None:intergenic |
| TGGTACAAGGACGAATTTGT+TGG | 0.502601 | tig0029813:-832 | Msa1442160:CDS |
| TGTGCGGTTGAGATGGGTGG+TGG | 0.503482 | tig0029813:+1472 | None:intergenic |
| TGGCGCTTCAGCAGAAACTT+AGG | 0.506431 | tig0029813:-812 | Msa1442160:CDS |
| TTCTCCGGCACCGCCGTCGT+CGG | 0.507390 | tig0029813:+1193 | None:intergenic |
| ATAAGGAAGGAAATCGGATC+GGG | 0.511146 | tig0029813:+1292 | None:intergenic |
| GGATTTGGTGGAGGAGATAG+GGG | 0.513847 | tig0029813:+1328 | None:intergenic |
| AGATGGGTGGTGGAGAAGGT+TGG | 0.514914 | tig0029813:+1482 | None:intergenic |
| AATCCATTTGGATTATGGAG+GGG | 0.517368 | tig0029813:+1540 | None:intergenic |
| GCGGTGGAAGGGATCGGAGA+TGG | 0.522311 | tig0029813:+1262 | None:intergenic |
| TTCTCAGCAAAAGTCGAAAA+CGG | 0.523706 | tig0029813:+1080 | None:intergenic |
| AGTGGAGGTGGATTTGGTGG+AGG | 0.527638 | tig0029813:+1319 | None:intergenic |
| TCGGAGATGGAAGAGAGATA+AGG | 0.528602 | tig0029813:+1275 | None:intergenic |
| GTCGAAGCGGTGGAAGGGAT+CGG | 0.531095 | tig0029813:+1256 | None:intergenic |
| CACGACGGTTGCTGAGAAGG+TGG | 0.531198 | tig0029813:+1515 | None:intergenic |
| AGAGGTTGAGGAAGATGTGG+AGG | 0.531571 | tig0029813:+1448 | None:intergenic |
| GAATTCGGGAGAGGAGATTG+TGG | 0.533724 | tig0029813:+1352 | None:intergenic |
| TTCAGTTACTTAATGGTACA+AGG | 0.543503 | tig0029813:-845 | Msa1442160:CDS |
| GGATCGGGTGAGAGTGGAGG+TGG | 0.545880 | tig0029813:+1307 | None:intergenic |
| GGTTGTGCGGTTGAGATGGG+TGG | 0.547848 | tig0029813:+1469 | None:intergenic |
| TGGAAGAGAGAGGATTGTTG+AGG | 0.554364 | tig0029813:+1375 | None:intergenic |
| CGACGGTTGCTGAGAAGGTG+GGG | 0.554921 | tig0029813:+1517 | None:intergenic |
| AGGAAGAGATGAGAGAGTTG+AGG | 0.555952 | tig0029813:+1687 | None:intergenic |
| ACGACGGTTGCTGAGAAGGT+GGG | 0.556045 | tig0029813:+1516 | None:intergenic |
| TCGTCCTTCTTTGAAGCGCA+GGG | 0.559860 | tig0029813:-978 | Msa1442160:CDS |
| GAAATCGGATCGGGTGAGAG+TGG | 0.566399 | tig0029813:+1301 | None:intergenic |
| CACCTTCTCAGCAACCGTCG+TGG | 0.569490 | tig0029813:-1514 | Msa1442160:CDS |
| GATTTCGTCGAAGCGGTGGA+AGG | 0.572538 | tig0029813:+1250 | None:intergenic |
| GAATCCATTTGGATTATGGA+GGG | 0.579412 | tig0029813:+1539 | None:intergenic |
| TGCGGATTTCGTCGAAGCGG+TGG | 0.583150 | tig0029813:+1246 | None:intergenic |
| AGATGGAAGAGAGATAAGGA+AGG | 0.585671 | tig0029813:+1279 | None:intergenic |
| GATTCGTGAATTGAAGGATA+CGG | 0.585784 | tig0029813:-910 | Msa1442160:CDS |
| GATAAGGAAGGAAATCGGAT+CGG | 0.590702 | tig0029813:+1291 | None:intergenic |
| ATTTCGTCGAAGCGGTGGAA+GGG | 0.591536 | tig0029813:+1251 | None:intergenic |
| TTCGGGAGAGGAGATTGTGG+TGG | 0.598720 | tig0029813:+1355 | None:intergenic |
| AAAAGGTTGGGATCTGAAGG+AGG | 0.602368 | tig0029813:+1667 | None:intergenic |
| AGGAAGATGTGGAGGTTGTG+CGG | 0.607105 | tig0029813:+1456 | None:intergenic |
| AGATCGTGGAAGGATGTTCG+AGG | 0.608490 | tig0029813:-932 | Msa1442160:CDS |
| GCTTTCGCAGTATCTTGATG+TGG | 0.613686 | tig0029813:-1039 | Msa1442160:CDS |
| CCTTCTCAGCAACCGTCGTG+GGG | 0.614767 | tig0029813:-1512 | Msa1442160:CDS |
| ATCGGATCGGGTGAGAGTGG+AGG | 0.617240 | tig0029813:+1304 | None:intergenic |
| AGTAAAGGGACGGAACTTCA+CGG | 0.620921 | tig0029813:+1153 | None:intergenic |
| TCTTGTTTGAAGTAAAGGGA+CGG | 0.624946 | tig0029813:+1143 | None:intergenic |
| CTTAATGGGAAGATCGTGGA+AGG | 0.629428 | tig0029813:-942 | Msa1442160:CDS |
| GGATCTTAATGGGAAGATCG+TGG | 0.650732 | tig0029813:-946 | Msa1442160:CDS |
| TCGAAAACGGACACGCCGCA+CGG | 0.655079 | tig0029813:+1093 | None:intergenic |
| ATCTCAACTATCTCCGACGA+CGG | 0.666343 | tig0029813:-1206 | Msa1442160:CDS |
| CCGATTTGGTTGAGTCTGCG+AGG | 0.667269 | tig0029813:-872 | Msa1442160:CDS |
| GTTGGTGATCTTCCCCACGA+CGG | 0.670385 | tig0029813:+1500 | None:intergenic |
| TCAACTATCTCCGACGACGG+CGG | 0.678809 | tig0029813:-1203 | Msa1442160:CDS |
| GTTTGCGGATTTCGTCGAAG+CGG | 0.684356 | tig0029813:+1243 | None:intergenic |
| AGAAGGCGCTACGTTCCGTG+CGG | 0.742261 | tig0029813:-1108 | Msa1442160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTGAATCAAGAA+TGG | - | tig0029813:1353-1372 | Msa1442160:CDS | 15.0% |
| !! | AATTAATCAATATATTCAAC+AGG | - | tig0029813:1498-1517 | Msa1442160:CDS | 15.0% |
| !! | TAAAATAATAAAGGAAACAT+AGG | + | tig0029813:1565-1584 | None:intergenic | 15.0% |
| !! | AAAAACGACTAAAATAATAA+AGG | + | tig0029813:1574-1593 | None:intergenic | 15.0% |
| !! | CAAAATATATCAACTTAAAA+TGG | + | tig0029813:1620-1639 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTGAATCAAGAA+TGG | - | tig0029813:1353-1372 | Msa1442160:CDS | 15.0% |
| !! | AATTAATCAATATATTCAAC+AGG | - | tig0029813:1498-1517 | Msa1442160:CDS | 15.0% |
| !! | TAAAATAATAAAGGAAACAT+AGG | + | tig0029813:1565-1584 | None:intergenic | 15.0% |
| !! | AAAAACGACTAAAATAATAA+AGG | + | tig0029813:1574-1593 | None:intergenic | 15.0% |
| !! | CAAAATATATCAACTTAAAA+TGG | + | tig0029813:1620-1639 | None:intergenic | 15.0% |
| !!! | AAAATCTTGTTTGAAGTAAA+GGG | + | tig0029813:570-589 | None:intergenic | 20.0% |
| !! | AAACTCAAAATCTAAAAATG+AGG | + | tig0029813:1026-1045 | None:intergenic | 20.0% |
| !!! | AAAATCTTGTTTGAAGTAAA+GGG | + | tig0029813:570-589 | None:intergenic | 20.0% |
| !! | AAACTCAAAATCTAAAAATG+AGG | + | tig0029813:1026-1045 | None:intergenic | 20.0% |
| ! | AAATGTGAATGAAAAAGGTT+GGG | + | tig0029813:54-73 | None:intergenic | 25.0% |
| !! | GAAAATCTTGTTTGAAGTAA+AGG | + | tig0029813:571-590 | None:intergenic | 25.0% |
| ! | TAAAACTGCATAAGATTAAC+TGG | + | tig0029813:1289-1308 | None:intergenic | 25.0% |
| !!! | TAATGGATTATTGAGATTTG+TGG | - | tig0029813:1420-1439 | Msa1442160:CDS | 25.0% |
| !!! | AATGGATTATTGAGATTTGT+GGG | - | tig0029813:1421-1440 | Msa1442160:CDS | 25.0% |
| !! | AAACTATTTGCAGTTTTCTT+TGG | - | tig0029813:1445-1464 | Msa1442160:CDS | 25.0% |
| !! | AACTATTTGCAGTTTTCTTT+GGG | - | tig0029813:1446-1465 | Msa1442160:CDS | 25.0% |
| !! | TTTTATGAATGTTTGACAAC+TGG | - | tig0029813:1590-1609 | Msa1442160:five_prime_UTR | 25.0% |
| ! | AAATGTGAATGAAAAAGGTT+GGG | + | tig0029813:54-73 | None:intergenic | 25.0% |
| !! | GAAAATCTTGTTTGAAGTAA+AGG | + | tig0029813:571-590 | None:intergenic | 25.0% |
| ! | TAAAACTGCATAAGATTAAC+TGG | + | tig0029813:1289-1308 | None:intergenic | 25.0% |
| !!! | TAATGGATTATTGAGATTTG+TGG | - | tig0029813:1420-1439 | Msa1442160:CDS | 25.0% |
| !!! | AATGGATTATTGAGATTTGT+GGG | - | tig0029813:1421-1440 | Msa1442160:CDS | 25.0% |
| !! | AAACTATTTGCAGTTTTCTT+TGG | - | tig0029813:1445-1464 | Msa1442160:CDS | 25.0% |
| !! | AACTATTTGCAGTTTTCTTT+GGG | - | tig0029813:1446-1465 | Msa1442160:CDS | 25.0% |
| !! | TTTTATGAATGTTTGACAAC+TGG | - | tig0029813:1590-1609 | Msa1442160:five_prime_UTR | 25.0% |
| GAAATGTGAATGAAAAAGGT+TGG | + | tig0029813:55-74 | None:intergenic | 30.0% | |
| ATGGGAAATGTGAATGAAAA+AGG | + | tig0029813:59-78 | None:intergenic | 30.0% | |
| TTCAGTTACTTAATGGTACA+AGG | - | tig0029813:861-880 | Msa1442160:CDS | 30.0% | |
| !!! | GATTTTAGAGTGAAGTGTTT+AGG | - | tig0029813:1062-1081 | Msa1442160:CDS | 30.0% |
| !!! | GATTTTAGAGTGAAGTGTTT+AGG | - | tig0029813:1062-1081 | Msa1442160:CDS | 30.0% |
| ! | ATTTTGAATCAAGAATGGAG+AGG | - | tig0029813:1358-1377 | Msa1442160:CDS | 30.0% |
| GCTATACTGAATAGGATTAA+TGG | - | tig0029813:1403-1422 | Msa1442160:CDS | 30.0% | |
| ! | ATGGATTATTGAGATTTGTG+GGG | - | tig0029813:1422-1441 | Msa1442160:CDS | 30.0% |
| ! | GGTTTCTTTGAAAAGTAGTA+TGG | - | tig0029813:1519-1538 | Msa1442160:CDS | 30.0% |
| GAAATGTGAATGAAAAAGGT+TGG | + | tig0029813:55-74 | None:intergenic | 30.0% | |
| ATGGGAAATGTGAATGAAAA+AGG | + | tig0029813:59-78 | None:intergenic | 30.0% | |
| TTCAGTTACTTAATGGTACA+AGG | - | tig0029813:861-880 | Msa1442160:CDS | 30.0% | |
| !!! | GATTTTAGAGTGAAGTGTTT+AGG | - | tig0029813:1062-1081 | Msa1442160:CDS | 30.0% |
| !!! | GATTTTAGAGTGAAGTGTTT+AGG | - | tig0029813:1062-1081 | Msa1442160:CDS | 30.0% |
| ! | ATTTTGAATCAAGAATGGAG+AGG | - | tig0029813:1358-1377 | Msa1442160:CDS | 30.0% |
| GCTATACTGAATAGGATTAA+TGG | - | tig0029813:1403-1422 | Msa1442160:CDS | 30.0% | |
| ! | ATGGATTATTGAGATTTGTG+GGG | - | tig0029813:1422-1441 | Msa1442160:CDS | 30.0% |
| ! | GGTTTCTTTGAAAAGTAGTA+TGG | - | tig0029813:1519-1538 | Msa1442160:CDS | 30.0% |
| !!! | AGGATTTTAGTTAGTGTGAG+GGG | + | tig0029813:115-134 | None:intergenic | 35.0% |
| !!! | GAGGATTTTAGTTAGTGTGA+GGG | + | tig0029813:116-135 | None:intergenic | 35.0% |
| !!! | TGAGGATTTTAGTTAGTGTG+AGG | + | tig0029813:117-136 | None:intergenic | 35.0% |
| !!! | AGGACATTGGTTTTATAGTG+AGG | + | tig0029813:135-154 | None:intergenic | 35.0% |
| AATCCATTTGGATTATGGAG+GGG | + | tig0029813:169-188 | None:intergenic | 35.0% | |
| GAATCCATTTGGATTATGGA+GGG | + | tig0029813:170-189 | None:intergenic | 35.0% | |
| TTGGATTGTTGAAGAGTCTT+TGG | + | tig0029813:297-316 | None:intergenic | 35.0% | |
| AGAGAGATAAGGAAGGAAAT+CGG | + | tig0029813:423-442 | None:intergenic | 35.0% | |
| ! | TCTTGTTTGAAGTAAAGGGA+CGG | + | tig0029813:566-585 | None:intergenic | 35.0% |
| ! | CAAGATTTTCATCTCGAAGA+AGG | - | tig0029813:581-600 | Msa1442160:intron | 35.0% |
| TTCTCAGCAAAAGTCGAAAA+CGG | + | tig0029813:629-648 | None:intergenic | 35.0% | |
| GATTCGTGAATTGAAGGATA+CGG | - | tig0029813:796-815 | Msa1442160:CDS | 35.0% | |
| !! | TAGGCTTATTGATTCCGATT+TGG | - | tig0029813:820-839 | Msa1442160:CDS | 35.0% |
| AGGCAGATTCAGTTACTTAA+TGG | - | tig0029813:854-873 | Msa1442160:CDS | 35.0% | |
| !! | AGAGTGAAGTGTTTAGGTTT+TGG | - | tig0029813:1093-1112 | Msa1442160:CDS | 35.0% |
| !! | CCTTCCATTAGAAGTACTAT+CGG | - | tig0029813:1250-1269 | Msa1442160:CDS | 35.0% |
| ATGTGGAAGCTATACTGAAT+AGG | - | tig0029813:1395-1414 | Msa1442160:CDS | 35.0% | |
| ! | TGATGATTTGCAACATTTGC+TGG | - | tig0029813:1692-1711 | Msa1442160:five_prime_UTR | 35.0% |
| !!! | AGGATTTTAGTTAGTGTGAG+GGG | + | tig0029813:115-134 | None:intergenic | 35.0% |
| !!! | GAGGATTTTAGTTAGTGTGA+GGG | + | tig0029813:116-135 | None:intergenic | 35.0% |
| !!! | TGAGGATTTTAGTTAGTGTG+AGG | + | tig0029813:117-136 | None:intergenic | 35.0% |
| !!! | AGGACATTGGTTTTATAGTG+AGG | + | tig0029813:135-154 | None:intergenic | 35.0% |
| AATCCATTTGGATTATGGAG+GGG | + | tig0029813:169-188 | None:intergenic | 35.0% | |
| GAATCCATTTGGATTATGGA+GGG | + | tig0029813:170-189 | None:intergenic | 35.0% | |
| TTGGATTGTTGAAGAGTCTT+TGG | + | tig0029813:297-316 | None:intergenic | 35.0% | |
| AGAGAGATAAGGAAGGAAAT+CGG | + | tig0029813:423-442 | None:intergenic | 35.0% | |
| ! | TCTTGTTTGAAGTAAAGGGA+CGG | + | tig0029813:566-585 | None:intergenic | 35.0% |
| ! | CAAGATTTTCATCTCGAAGA+AGG | - | tig0029813:581-600 | Msa1442160:intron | 35.0% |
| TTCTCAGCAAAAGTCGAAAA+CGG | + | tig0029813:629-648 | None:intergenic | 35.0% | |
| GATTCGTGAATTGAAGGATA+CGG | - | tig0029813:796-815 | Msa1442160:CDS | 35.0% | |
| !! | TAGGCTTATTGATTCCGATT+TGG | - | tig0029813:820-839 | Msa1442160:CDS | 35.0% |
| AGGCAGATTCAGTTACTTAA+TGG | - | tig0029813:854-873 | Msa1442160:CDS | 35.0% | |
| !! | AGAGTGAAGTGTTTAGGTTT+TGG | - | tig0029813:1093-1112 | Msa1442160:CDS | 35.0% |
| !! | CCTTCCATTAGAAGTACTAT+CGG | - | tig0029813:1250-1269 | Msa1442160:CDS | 35.0% |
| ATGTGGAAGCTATACTGAAT+AGG | - | tig0029813:1395-1414 | Msa1442160:CDS | 35.0% | |
| ! | TGATGATTTGCAACATTTGC+TGG | - | tig0029813:1692-1711 | Msa1442160:five_prime_UTR | 35.0% |
| TGAAAAAGGTTGGGATCTGA+AGG | + | tig0029813:45-64 | None:intergenic | 40.0% | |
| !!! | ATTTTAGTTAGTGTGAGGGG+GGG | + | tig0029813:112-131 | None:intergenic | 40.0% |
| !!! | GATTTTAGTTAGTGTGAGGG+GGG | + | tig0029813:113-132 | None:intergenic | 40.0% |
| !!! | GGATTTTAGTTAGTGTGAGG+GGG | + | tig0029813:114-133 | None:intergenic | 40.0% |
| ATCCATTTGGATTATGGAGG+GGG | + | tig0029813:168-187 | None:intergenic | 40.0% | |
| GGAATCCATTTGGATTATGG+AGG | + | tig0029813:171-190 | None:intergenic | 40.0% | |
| TGGGGAATCCATTTGGATTA+TGG | + | tig0029813:174-193 | None:intergenic | 40.0% | |
| TTTGGAGAAAGATGGAGAAG+AGG | + | tig0029813:279-298 | None:intergenic | 40.0% | |
| ! | GAAGAGTCTTTGGAGAAAGA+TGG | + | tig0029813:287-306 | None:intergenic | 40.0% |
| ATAAGGAAGGAAATCGGATC+GGG | + | tig0029813:417-436 | None:intergenic | 40.0% | |
| GATAAGGAAGGAAATCGGAT+CGG | + | tig0029813:418-437 | None:intergenic | 40.0% | |
| AGATGGAAGAGAGATAAGGA+AGG | + | tig0029813:430-449 | None:intergenic | 40.0% | |
| TGATGTGGTTGAACTTCATC+TGG | - | tig0029813:682-701 | Msa1442160:intron | 40.0% | |
| GGTTGAACTTCATCTGGTTA+AGG | - | tig0029813:688-707 | Msa1442160:intron | 40.0% | |
| GTGAGTTGCAGGATCTTAAT+GGG | - | tig0029813:750-769 | Msa1442160:intron | 40.0% | |
| TTCGAGGATTCGTGAATTGA+AGG | - | tig0029813:790-809 | Msa1442160:CDS | 40.0% | |
| GTGAATTGAAGGATACGGTT+AGG | - | tig0029813:801-820 | Msa1442160:CDS | 40.0% | |
| TGGTACAAGGACGAATTTGT+TGG | - | tig0029813:874-893 | Msa1442160:CDS | 40.0% | |
| ACGTAATCACACATGTGTGT+CGG | - | tig0029813:1215-1234 | Msa1442160:CDS | 40.0% | |
| CCGATAGTACTTCTAATGGA+AGG | + | tig0029813:1253-1272 | None:intergenic | 40.0% | |
| !! | AGCACCGATAGTACTTCTAA+TGG | + | tig0029813:1257-1276 | None:intergenic | 40.0% |
| AGGTGTTAGTGCTGTAAATG+TGG | - | tig0029813:1378-1397 | Msa1442160:CDS | 40.0% | |
| TGAAAAAGGTTGGGATCTGA+AGG | + | tig0029813:45-64 | None:intergenic | 40.0% | |
| !!! | ATTTTAGTTAGTGTGAGGGG+GGG | + | tig0029813:112-131 | None:intergenic | 40.0% |
| !!! | GATTTTAGTTAGTGTGAGGG+GGG | + | tig0029813:113-132 | None:intergenic | 40.0% |
| !!! | GGATTTTAGTTAGTGTGAGG+GGG | + | tig0029813:114-133 | None:intergenic | 40.0% |
| ATCCATTTGGATTATGGAGG+GGG | + | tig0029813:168-187 | None:intergenic | 40.0% | |
| GGAATCCATTTGGATTATGG+AGG | + | tig0029813:171-190 | None:intergenic | 40.0% | |
| TGGGGAATCCATTTGGATTA+TGG | + | tig0029813:174-193 | None:intergenic | 40.0% | |
| TTTGGAGAAAGATGGAGAAG+AGG | + | tig0029813:279-298 | None:intergenic | 40.0% | |
| ! | GAAGAGTCTTTGGAGAAAGA+TGG | + | tig0029813:287-306 | None:intergenic | 40.0% |
| ATAAGGAAGGAAATCGGATC+GGG | + | tig0029813:417-436 | None:intergenic | 40.0% | |
| GATAAGGAAGGAAATCGGAT+CGG | + | tig0029813:418-437 | None:intergenic | 40.0% | |
| AGATGGAAGAGAGATAAGGA+AGG | + | tig0029813:430-449 | None:intergenic | 40.0% | |
| TGATGTGGTTGAACTTCATC+TGG | - | tig0029813:682-701 | Msa1442160:intron | 40.0% | |
| GGTTGAACTTCATCTGGTTA+AGG | - | tig0029813:688-707 | Msa1442160:intron | 40.0% | |
| GTGAGTTGCAGGATCTTAAT+GGG | - | tig0029813:750-769 | Msa1442160:intron | 40.0% | |
| TTCGAGGATTCGTGAATTGA+AGG | - | tig0029813:790-809 | Msa1442160:CDS | 40.0% | |
| GTGAATTGAAGGATACGGTT+AGG | - | tig0029813:801-820 | Msa1442160:CDS | 40.0% | |
| TGGTACAAGGACGAATTTGT+TGG | - | tig0029813:874-893 | Msa1442160:CDS | 40.0% | |
| ACGTAATCACACATGTGTGT+CGG | - | tig0029813:1215-1234 | Msa1442160:CDS | 40.0% | |
| CCGATAGTACTTCTAATGGA+AGG | + | tig0029813:1253-1272 | None:intergenic | 40.0% | |
| !! | AGCACCGATAGTACTTCTAA+TGG | + | tig0029813:1257-1276 | None:intergenic | 40.0% |
| AGGTGTTAGTGCTGTAAATG+TGG | - | tig0029813:1378-1397 | Msa1442160:CDS | 40.0% | |
| AGAGATGAGAGAGTTGAGGT+TGG | + | tig0029813:18-37 | None:intergenic | 45.0% | |
| AGGAAGAGATGAGAGAGTTG+AGG | + | tig0029813:22-41 | None:intergenic | 45.0% | |
| AAAAGGTTGGGATCTGAAGG+AGG | + | tig0029813:42-61 | None:intergenic | 45.0% | |
| GGGAGTTAGTTAGAGGACAT+TGG | + | tig0029813:148-167 | None:intergenic | 45.0% | |
| AGAAGAGGTTGAGGAAGATG+TGG | + | tig0029813:264-283 | None:intergenic | 45.0% | |
| GAAAGATGGAGAAGAGGTTG+AGG | + | tig0029813:273-292 | None:intergenic | 45.0% | |
| TGAGGATTGAGGAGAGAGAT+TGG | + | tig0029813:316-335 | None:intergenic | 45.0% | |
| GAGAGGATTGTTGAGGATTG+AGG | + | tig0029813:327-346 | None:intergenic | 45.0% | |
| TGGAAGAGAGAGGATTGTTG+AGG | + | tig0029813:334-353 | None:intergenic | 45.0% | |
| !! | TGGATTTGGTGGAGGAGATA+GGG | + | tig0029813:382-401 | None:intergenic | 45.0% |
| TCGGAGATGGAAGAGAGATA+AGG | + | tig0029813:434-453 | None:intergenic | 45.0% | |
| TCTCGTTGTTAGCGTGTTTG+CGG | + | tig0029813:481-500 | None:intergenic | 45.0% | |
| ATCTCAACTATCTCCGACGA+CGG | - | tig0029813:500-519 | Msa1442160:intron | 45.0% | |
| AGTAAAGGGACGGAACTTCA+CGG | + | tig0029813:556-575 | None:intergenic | 45.0% | |
| GCTTTCGCAGTATCTTGATG+TGG | - | tig0029813:667-686 | Msa1442160:intron | 45.0% | |
| GGTGAGTTGCAGGATCTTAA+TGG | - | tig0029813:749-768 | Msa1442160:intron | 45.0% | |
| GGATCTTAATGGGAAGATCG+TGG | - | tig0029813:760-779 | Msa1442160:intron | 45.0% | |
| CTTAATGGGAAGATCGTGGA+AGG | - | tig0029813:764-783 | Msa1442160:intron | 45.0% | |
| AGCACTCTCTGCTCTCAAAT+TGG | - | tig0029813:937-956 | Msa1442160:CDS | 45.0% | |
| AGAGATGAGAGAGTTGAGGT+TGG | + | tig0029813:18-37 | None:intergenic | 45.0% | |
| AGGAAGAGATGAGAGAGTTG+AGG | + | tig0029813:22-41 | None:intergenic | 45.0% | |
| AAAAGGTTGGGATCTGAAGG+AGG | + | tig0029813:42-61 | None:intergenic | 45.0% | |
| GGGAGTTAGTTAGAGGACAT+TGG | + | tig0029813:148-167 | None:intergenic | 45.0% | |
| AGAAGAGGTTGAGGAAGATG+TGG | + | tig0029813:264-283 | None:intergenic | 45.0% | |
| GAAAGATGGAGAAGAGGTTG+AGG | + | tig0029813:273-292 | None:intergenic | 45.0% | |
| TGAGGATTGAGGAGAGAGAT+TGG | + | tig0029813:316-335 | None:intergenic | 45.0% | |
| GAGAGGATTGTTGAGGATTG+AGG | + | tig0029813:327-346 | None:intergenic | 45.0% | |
| TGGAAGAGAGAGGATTGTTG+AGG | + | tig0029813:334-353 | None:intergenic | 45.0% | |
| !! | TGGATTTGGTGGAGGAGATA+GGG | + | tig0029813:382-401 | None:intergenic | 45.0% |
| TCGGAGATGGAAGAGAGATA+AGG | + | tig0029813:434-453 | None:intergenic | 45.0% | |
| TCTCGTTGTTAGCGTGTTTG+CGG | + | tig0029813:481-500 | None:intergenic | 45.0% | |
| ATCTCAACTATCTCCGACGA+CGG | - | tig0029813:500-519 | Msa1442160:intron | 45.0% | |
| AGTAAAGGGACGGAACTTCA+CGG | + | tig0029813:556-575 | None:intergenic | 45.0% | |
| GCTTTCGCAGTATCTTGATG+TGG | - | tig0029813:667-686 | Msa1442160:intron | 45.0% | |
| GGTGAGTTGCAGGATCTTAA+TGG | - | tig0029813:749-768 | Msa1442160:intron | 45.0% | |
| GGATCTTAATGGGAAGATCG+TGG | - | tig0029813:760-779 | Msa1442160:intron | 45.0% | |
| CTTAATGGGAAGATCGTGGA+AGG | - | tig0029813:764-783 | Msa1442160:intron | 45.0% | |
| AGCACTCTCTGCTCTCAAAT+TGG | - | tig0029813:937-956 | Msa1442160:CDS | 45.0% | |
| !! | GTTGAGGTTGGTTTGCAGTG+AGG | + | tig0029813:6-25 | None:intergenic | 50.0% |
| ATGGAGGGGGAGTTAGTTAG+AGG | + | tig0029813:155-174 | None:intergenic | 50.0% | |
| CTCCCCCTCCATAATCCAAA+TGG | - | tig0029813:163-182 | Msa1442160:intron | 50.0% | |
| GAGAAGGTGGGGAATCCATT+TGG | + | tig0029813:181-200 | None:intergenic | 50.0% | |
| AGGAAGATGTGGAGGTTGTG+CGG | + | tig0029813:253-272 | None:intergenic | 50.0% | |
| AGAGGTTGAGGAAGATGTGG+AGG | + | tig0029813:261-280 | None:intergenic | 50.0% | |
| ! | GAGATTGTGGTGGAAGAGAG+AGG | + | tig0029813:344-363 | None:intergenic | 50.0% |
| GAATTCGGGAGAGGAGATTG+TGG | + | tig0029813:357-376 | None:intergenic | 50.0% | |
| GAGGAGATAGGGGTGAATTC+GGG | + | tig0029813:371-390 | None:intergenic | 50.0% | |
| GGAGGAGATAGGGGTGAATT+CGG | + | tig0029813:372-391 | None:intergenic | 50.0% | |
| !! | GGATTTGGTGGAGGAGATAG+GGG | + | tig0029813:381-400 | None:intergenic | 50.0% |
| !! | GTGGATTTGGTGGAGGAGAT+AGG | + | tig0029813:383-402 | None:intergenic | 50.0% |
| ATTTCGTCGAAGCGGTGGAA+GGG | + | tig0029813:458-477 | None:intergenic | 50.0% | |
| GTTTGCGGATTTCGTCGAAG+CGG | + | tig0029813:466-485 | None:intergenic | 50.0% | |
| ! | TGCTGAGAACGCGATTTTGC+AGG | - | tig0029813:640-659 | Msa1442160:intron | 50.0% |
| !! | TCGTCCTTCTTTGAAGCGCA+GGG | - | tig0029813:728-747 | Msa1442160:intron | 50.0% |
| AGATCGTGGAAGGATGTTCG+AGG | - | tig0029813:774-793 | Msa1442160:CDS | 50.0% | |
| CCTCGCAGACTCAACCAAAT+CGG | + | tig0029813:837-856 | None:intergenic | 50.0% | |
| TGGCGCTTCAGCAGAAACTT+AGG | - | tig0029813:894-913 | Msa1442160:CDS | 50.0% | |
| !! | TAGCAGTGCTGACGTGTCAT+TGG | + | tig0029813:1169-1188 | None:intergenic | 50.0% |
| ! | TCTAATGGAAGGCGTGTCCA+GGG | + | tig0029813:1242-1261 | None:intergenic | 50.0% |
| ! | TTCTAATGGAAGGCGTGTCC+AGG | + | tig0029813:1243-1262 | None:intergenic | 50.0% |
| GTTGCATCTGCAGATTGTGC+TGG | - | tig0029813:1654-1673 | Msa1442160:five_prime_UTR | 50.0% | |
| !! | GTTGAGGTTGGTTTGCAGTG+AGG | + | tig0029813:6-25 | None:intergenic | 50.0% |
| ATGGAGGGGGAGTTAGTTAG+AGG | + | tig0029813:155-174 | None:intergenic | 50.0% | |
| CTCCCCCTCCATAATCCAAA+TGG | - | tig0029813:163-182 | Msa1442160:intron | 50.0% | |
| GAGAAGGTGGGGAATCCATT+TGG | + | tig0029813:181-200 | None:intergenic | 50.0% | |
| AGGAAGATGTGGAGGTTGTG+CGG | + | tig0029813:253-272 | None:intergenic | 50.0% | |
| AGAGGTTGAGGAAGATGTGG+AGG | + | tig0029813:261-280 | None:intergenic | 50.0% | |
| ! | GAGATTGTGGTGGAAGAGAG+AGG | + | tig0029813:344-363 | None:intergenic | 50.0% |
| GAATTCGGGAGAGGAGATTG+TGG | + | tig0029813:357-376 | None:intergenic | 50.0% | |
| GAGGAGATAGGGGTGAATTC+GGG | + | tig0029813:371-390 | None:intergenic | 50.0% | |
| GGAGGAGATAGGGGTGAATT+CGG | + | tig0029813:372-391 | None:intergenic | 50.0% | |
| !! | GGATTTGGTGGAGGAGATAG+GGG | + | tig0029813:381-400 | None:intergenic | 50.0% |
| !! | GTGGATTTGGTGGAGGAGAT+AGG | + | tig0029813:383-402 | None:intergenic | 50.0% |
| ATTTCGTCGAAGCGGTGGAA+GGG | + | tig0029813:458-477 | None:intergenic | 50.0% | |
| GTTTGCGGATTTCGTCGAAG+CGG | + | tig0029813:466-485 | None:intergenic | 50.0% | |
| ! | TGCTGAGAACGCGATTTTGC+AGG | - | tig0029813:640-659 | Msa1442160:intron | 50.0% |
| !! | TCGTCCTTCTTTGAAGCGCA+GGG | - | tig0029813:728-747 | Msa1442160:intron | 50.0% |
| AGATCGTGGAAGGATGTTCG+AGG | - | tig0029813:774-793 | Msa1442160:CDS | 50.0% | |
| CCTCGCAGACTCAACCAAAT+CGG | + | tig0029813:837-856 | None:intergenic | 50.0% | |
| TGGCGCTTCAGCAGAAACTT+AGG | - | tig0029813:894-913 | Msa1442160:CDS | 50.0% | |
| !! | TAGCAGTGCTGACGTGTCAT+TGG | + | tig0029813:1169-1188 | None:intergenic | 50.0% |
| ! | TCTAATGGAAGGCGTGTCCA+GGG | + | tig0029813:1242-1261 | None:intergenic | 50.0% |
| ! | TTCTAATGGAAGGCGTGTCC+AGG | + | tig0029813:1243-1262 | None:intergenic | 50.0% |
| GTTGCATCTGCAGATTGTGC+TGG | - | tig0029813:1654-1673 | Msa1442160:five_prime_UTR | 50.0% | |
| ! | TAGTGTGAGGGGGGGTGTAA+GGG | + | tig0029813:104-123 | None:intergenic | 55.0% |
| ! | TTAGTGTGAGGGGGGGTGTA+AGG | + | tig0029813:105-124 | None:intergenic | 55.0% |
| ACGACGGTTGCTGAGAAGGT+GGG | + | tig0029813:193-212 | None:intergenic | 55.0% | |
| ACCTTCTCAGCAACCGTCGT+GGG | - | tig0029813:193-212 | Msa1442160:intron | 55.0% | |
| !! | GTTGGTGATCTTCCCCACGA+CGG | + | tig0029813:209-228 | None:intergenic | 55.0% |
| !! | AGATGGGTGGTGGAGAAGGT+TGG | + | tig0029813:227-246 | None:intergenic | 55.0% |
| !! | GTTGAGATGGGTGGTGGAGA+AGG | + | tig0029813:231-250 | None:intergenic | 55.0% |
| GGAGGTTGTGCGGTTGAGAT+GGG | + | tig0029813:243-262 | None:intergenic | 55.0% | |
| TGGAGGTTGTGCGGTTGAGA+TGG | + | tig0029813:244-263 | None:intergenic | 55.0% | |
| TTCGGGAGAGGAGATTGTGG+TGG | + | tig0029813:354-373 | None:intergenic | 55.0% | |
| GATAGGGGTGAATTCGGGAG+AGG | + | tig0029813:366-385 | None:intergenic | 55.0% | |
| !! | AGTGGAGGTGGATTTGGTGG+AGG | + | tig0029813:390-409 | None:intergenic | 55.0% |
| ! | GAGAGTGGAGGTGGATTTGG+TGG | + | tig0029813:393-412 | None:intergenic | 55.0% |
| ! | GGTGAGAGTGGAGGTGGATT+TGG | + | tig0029813:396-415 | None:intergenic | 55.0% |
| GAAATCGGATCGGGTGAGAG+TGG | + | tig0029813:408-427 | None:intergenic | 55.0% | |
| GATTTCGTCGAAGCGGTGGA+AGG | + | tig0029813:459-478 | None:intergenic | 55.0% | |
| TCAACTATCTCCGACGACGG+CGG | - | tig0029813:503-522 | Msa1442160:intron | 55.0% | |
| !! | GTCGTCCTTCTTTGAAGCGC+AGG | - | tig0029813:727-746 | Msa1442160:intron | 55.0% |
| CTCACCCTGCGCTTCAAAGA+AGG | + | tig0029813:735-754 | None:intergenic | 55.0% | |
| !! | CCGATTTGGTTGAGTCTGCG+AGG | - | tig0029813:834-853 | Msa1442160:CDS | 55.0% |
| TGCAGATTGTGCTGGAGCAC+TGG | - | tig0029813:1662-1681 | Msa1442160:five_prime_UTR | 55.0% | |
| ! | TAGTGTGAGGGGGGGTGTAA+GGG | + | tig0029813:104-123 | None:intergenic | 55.0% |
| ! | TTAGTGTGAGGGGGGGTGTA+AGG | + | tig0029813:105-124 | None:intergenic | 55.0% |
| ACGACGGTTGCTGAGAAGGT+GGG | + | tig0029813:193-212 | None:intergenic | 55.0% | |
| ACCTTCTCAGCAACCGTCGT+GGG | - | tig0029813:193-212 | Msa1442160:intron | 55.0% | |
| !! | GTTGGTGATCTTCCCCACGA+CGG | + | tig0029813:209-228 | None:intergenic | 55.0% |
| !! | AGATGGGTGGTGGAGAAGGT+TGG | + | tig0029813:227-246 | None:intergenic | 55.0% |
| !! | GTTGAGATGGGTGGTGGAGA+AGG | + | tig0029813:231-250 | None:intergenic | 55.0% |
| GGAGGTTGTGCGGTTGAGAT+GGG | + | tig0029813:243-262 | None:intergenic | 55.0% | |
| TGGAGGTTGTGCGGTTGAGA+TGG | + | tig0029813:244-263 | None:intergenic | 55.0% | |
| TTCGGGAGAGGAGATTGTGG+TGG | + | tig0029813:354-373 | None:intergenic | 55.0% | |
| GATAGGGGTGAATTCGGGAG+AGG | + | tig0029813:366-385 | None:intergenic | 55.0% | |
| !! | AGTGGAGGTGGATTTGGTGG+AGG | + | tig0029813:390-409 | None:intergenic | 55.0% |
| ! | GAGAGTGGAGGTGGATTTGG+TGG | + | tig0029813:393-412 | None:intergenic | 55.0% |
| ! | GGTGAGAGTGGAGGTGGATT+TGG | + | tig0029813:396-415 | None:intergenic | 55.0% |
| GAAATCGGATCGGGTGAGAG+TGG | + | tig0029813:408-427 | None:intergenic | 55.0% | |
| GATTTCGTCGAAGCGGTGGA+AGG | + | tig0029813:459-478 | None:intergenic | 55.0% | |
| TCAACTATCTCCGACGACGG+CGG | - | tig0029813:503-522 | Msa1442160:intron | 55.0% | |
| !! | GTCGTCCTTCTTTGAAGCGC+AGG | - | tig0029813:727-746 | Msa1442160:intron | 55.0% |
| CTCACCCTGCGCTTCAAAGA+AGG | + | tig0029813:735-754 | None:intergenic | 55.0% | |
| !! | CCGATTTGGTTGAGTCTGCG+AGG | - | tig0029813:834-853 | Msa1442160:CDS | 55.0% |
| TGCAGATTGTGCTGGAGCAC+TGG | - | tig0029813:1662-1681 | Msa1442160:five_prime_UTR | 55.0% | |
| ! | TGGGGGGTGTAAGGGGAGAT+GGG | + | tig0029813:77-96 | None:intergenic | 60.0% |
| ! | ATGGGGGGTGTAAGGGGAGA+TGG | + | tig0029813:78-97 | None:intergenic | 60.0% |
| ! | AGGGGAGATGGGGGGTGTAA+GGG | + | tig0029813:85-104 | None:intergenic | 60.0% |
| ! | AAGGGGAGATGGGGGGTGTA+AGG | + | tig0029813:86-105 | None:intergenic | 60.0% |
| ! | AGTGTGAGGGGGGGTGTAAG+GGG | + | tig0029813:103-122 | None:intergenic | 60.0% |
| CGACGGTTGCTGAGAAGGTG+GGG | + | tig0029813:192-211 | None:intergenic | 60.0% | |
| CACGACGGTTGCTGAGAAGG+TGG | + | tig0029813:194-213 | None:intergenic | 60.0% | |
| CACCTTCTCAGCAACCGTCG+TGG | - | tig0029813:192-211 | Msa1442160:intron | 60.0% | |
| CCTTCTCAGCAACCGTCGTG+GGG | - | tig0029813:194-213 | Msa1442160:intron | 60.0% | |
| TGTGCGGTTGAGATGGGTGG+TGG | + | tig0029813:237-256 | None:intergenic | 60.0% | |
| GGTTGTGCGGTTGAGATGGG+TGG | + | tig0029813:240-259 | None:intergenic | 60.0% | |
| ATCGGATCGGGTGAGAGTGG+AGG | + | tig0029813:405-424 | None:intergenic | 60.0% | |
| GTCGAAGCGGTGGAAGGGAT+CGG | + | tig0029813:453-472 | None:intergenic | 60.0% | |
| TGCGGATTTCGTCGAAGCGG+TGG | + | tig0029813:463-482 | None:intergenic | 60.0% | |
| ACACGCGACGAGTGCTTCTC+CGG | + | tig0029813:531-550 | None:intergenic | 60.0% | |
| !! | AGAAGGCGCTACGTTCCGTG+CGG | - | tig0029813:598-617 | Msa1442160:intron | 60.0% |
| TCGAAAACGGACACGCCGCA+CGG | + | tig0029813:616-635 | None:intergenic | 60.0% | |
| TGAAGCGCAGGGTGAGTTGC+AGG | - | tig0029813:739-758 | Msa1442160:intron | 60.0% | |
| CACACATGTGTGTCGGACCC+TGG | - | tig0029813:1222-1241 | Msa1442160:CDS | 60.0% | |
| ! | TGGGGGGTGTAAGGGGAGAT+GGG | + | tig0029813:77-96 | None:intergenic | 60.0% |
| ! | ATGGGGGGTGTAAGGGGAGA+TGG | + | tig0029813:78-97 | None:intergenic | 60.0% |
| ! | AGGGGAGATGGGGGGTGTAA+GGG | + | tig0029813:85-104 | None:intergenic | 60.0% |
| ! | AAGGGGAGATGGGGGGTGTA+AGG | + | tig0029813:86-105 | None:intergenic | 60.0% |
| ! | AGTGTGAGGGGGGGTGTAAG+GGG | + | tig0029813:103-122 | None:intergenic | 60.0% |
| CGACGGTTGCTGAGAAGGTG+GGG | + | tig0029813:192-211 | None:intergenic | 60.0% | |
| CACGACGGTTGCTGAGAAGG+TGG | + | tig0029813:194-213 | None:intergenic | 60.0% | |
| CACCTTCTCAGCAACCGTCG+TGG | - | tig0029813:192-211 | Msa1442160:intron | 60.0% | |
| CCTTCTCAGCAACCGTCGTG+GGG | - | tig0029813:194-213 | Msa1442160:intron | 60.0% | |
| TGTGCGGTTGAGATGGGTGG+TGG | + | tig0029813:237-256 | None:intergenic | 60.0% | |
| GGTTGTGCGGTTGAGATGGG+TGG | + | tig0029813:240-259 | None:intergenic | 60.0% | |
| ATCGGATCGGGTGAGAGTGG+AGG | + | tig0029813:405-424 | None:intergenic | 60.0% | |
| GTCGAAGCGGTGGAAGGGAT+CGG | + | tig0029813:453-472 | None:intergenic | 60.0% | |
| TGCGGATTTCGTCGAAGCGG+TGG | + | tig0029813:463-482 | None:intergenic | 60.0% | |
| ACACGCGACGAGTGCTTCTC+CGG | + | tig0029813:531-550 | None:intergenic | 60.0% | |
| !! | AGAAGGCGCTACGTTCCGTG+CGG | - | tig0029813:598-617 | Msa1442160:intron | 60.0% |
| TCGAAAACGGACACGCCGCA+CGG | + | tig0029813:616-635 | None:intergenic | 60.0% | |
| TGAAGCGCAGGGTGAGTTGC+AGG | - | tig0029813:739-758 | Msa1442160:intron | 60.0% | |
| CACACATGTGTGTCGGACCC+TGG | - | tig0029813:1222-1241 | Msa1442160:CDS | 60.0% | |
| ! | GGGGAGATGGGGGGTGTAAG+GGG | + | tig0029813:84-103 | None:intergenic | 65.0% |
| GGGGTGTAAGGGGAGATGGG+GGG | + | tig0029813:74-93 | None:intergenic | 65.0% | |
| ! | GGGGGTGTAAGGGGAGATGG+GGG | + | tig0029813:75-94 | None:intergenic | 65.0% |
| ! | GGGGGGTGTAAGGGGAGATG+GGG | + | tig0029813:76-95 | None:intergenic | 65.0% |
| ! | GGGGGGGTGTAAGGGGAGAT+GGG | + | tig0029813:96-115 | None:intergenic | 65.0% |
| ! | AGGGGGGGTGTAAGGGGAGA+TGG | + | tig0029813:97-116 | None:intergenic | 65.0% |
| CCCCACGACGGTTGCTGAGA+AGG | + | tig0029813:197-216 | None:intergenic | 65.0% | |
| GGATCGGGTGAGAGTGGAGG+TGG | + | tig0029813:402-421 | None:intergenic | 65.0% | |
| GCGGTGGAAGGGATCGGAGA+TGG | + | tig0029813:447-466 | None:intergenic | 65.0% | |
| ! | GGGGAGATGGGGGGTGTAAG+GGG | + | tig0029813:84-103 | None:intergenic | 65.0% |
| GGGGTGTAAGGGGAGATGGG+GGG | + | tig0029813:74-93 | None:intergenic | 65.0% | |
| ! | GGGGGTGTAAGGGGAGATGG+GGG | + | tig0029813:75-94 | None:intergenic | 65.0% |
| ! | GGGGGGTGTAAGGGGAGATG+GGG | + | tig0029813:76-95 | None:intergenic | 65.0% |
| ! | GGGGGGGTGTAAGGGGAGAT+GGG | + | tig0029813:96-115 | None:intergenic | 65.0% |
| ! | AGGGGGGGTGTAAGGGGAGA+TGG | + | tig0029813:97-116 | None:intergenic | 65.0% |
| CCCCACGACGGTTGCTGAGA+AGG | + | tig0029813:197-216 | None:intergenic | 65.0% | |
| GGATCGGGTGAGAGTGGAGG+TGG | + | tig0029813:402-421 | None:intergenic | 65.0% | |
| GCGGTGGAAGGGATCGGAGA+TGG | + | tig0029813:447-466 | None:intergenic | 65.0% | |
| ATCTCCGACGACGGCGGTGC+CGG | - | tig0029813:509-528 | Msa1442160:intron | 70.0% | |
| TTCTCCGGCACCGCCGTCGT+CGG | + | tig0029813:516-535 | None:intergenic | 70.0% | |
| ATCTCCGACGACGGCGGTGC+CGG | - | tig0029813:509-528 | Msa1442160:intron | 70.0% | |
| TTCTCCGGCACCGCCGTCGT+CGG | + | tig0029813:516-535 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029813 | gene | 3 | 1725 | 3 | ID=Msa1442160;Name=Msa1442160 |
| tig0029813 | mRNA | 3 | 1725 | 3 | ID=Msa1442160-mRNA-1;Parent=Msa1442160;Name=Msa1442160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=179|1|0.5|1|1|1|2|0|284 |
| tig0029813 | exon | 3 | 77 | 3 | ID=Msa1442160-mRNA-1:exon:13239;Parent=Msa1442160-mRNA-1 |
| tig0029813 | exon | 770 | 1725 | 770 | ID=Msa1442160-mRNA-1:exon:13238;Parent=Msa1442160-mRNA-1 |
| tig0029813 | five_prime_UTR | 1547 | 1725 | 1547 | ID=Msa1442160-mRNA-1:five_prime_utr;Parent=Msa1442160-mRNA-1 |
| tig0029813 | CDS | 770 | 1546 | 770 | ID=Msa1442160-mRNA-1:cds;Parent=Msa1442160-mRNA-1 |
| tig0029813 | CDS | 3 | 77 | 3 | ID=Msa1442160-mRNA-1:cds;Parent=Msa1442160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
