Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0710160 | XP_003612971.3 | 94.933 | 671 | 34 | 0 | 1 | 671 | 3 | 673 | 0.0 | 1319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0710160 | sp|Q8RJP2|RHIE_DICD3 | 25.133 | 565 | 324 | 23 | 114 | 665 | 99 | 577 | 1.13e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0710160 | A0A396HNJ7 | 94.933 | 671 | 34 | 0 | 1 | 671 | 3 | 673 | 0.0 | 1319 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018060 | Msa0710160 | 0.813220 | 2.857308e-51 | -8.615850e-47 |
| Msa0618050 | Msa0710160 | 0.827701 | 1.352564e-54 | -8.615850e-47 |
| Msa0710160 | Msa0761430 | 0.858754 | 6.631621e-63 | -8.615850e-47 |
| Msa0710160 | Msa0804360 | 0.870584 | 1.306368e-66 | -8.615850e-47 |
| Msa0710160 | Msa0842030 | 0.884896 | 1.296013e-71 | -8.615850e-47 |
| Msa0485970 | Msa0710160 | 0.820056 | 8.390162e-53 | -8.615850e-47 |
| Msa0564950 | Msa0710160 | 0.847244 | 1.307203e-59 | -8.615850e-47 |
| Msa0580580 | Msa0710160 | 0.834745 | 2.509796e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0710160 | MtrunA17_Chr5g0411781 | 94.933 | 671 | 34 | 0 | 1 | 671 | 3 | 673 | 0.0 | 1319 |
| Msa0710160 | MtrunA17_Chr8g0367141 | 62.985 | 670 | 236 | 5 | 7 | 665 | 28 | 696 | 0.0 | 876 |
| Msa0710160 | MtrunA17_Chr8g0367111 | 62.150 | 679 | 238 | 7 | 6 | 668 | 13 | 688 | 0.0 | 861 |
| Msa0710160 | MtrunA17_Chr8g0367101 | 63.095 | 672 | 235 | 6 | 7 | 667 | 13 | 682 | 0.0 | 854 |
| Msa0710160 | MtrunA17_Chr5g0427851 | 52.673 | 636 | 280 | 8 | 50 | 665 | 9 | 643 | 0.0 | 672 |
| Msa0710160 | MtrunA17_Chr3g0141191 | 53.333 | 630 | 279 | 7 | 50 | 667 | 25 | 651 | 0.0 | 669 |
| Msa0710160 | MtrunA17_Chr3g0141181 | 50.396 | 631 | 296 | 7 | 54 | 670 | 13 | 640 | 0.0 | 654 |
| Msa0710160 | MtrunA17_Chr3g0141171 | 51.351 | 555 | 249 | 6 | 56 | 590 | 29 | 582 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0710160 | AT2G22620.1 | 54.834 | 631 | 272 | 6 | 46 | 668 | 52 | 677 | 0.0 | 707 |
| Msa0710160 | AT2G22620.3 | 54.834 | 631 | 272 | 6 | 46 | 668 | 52 | 677 | 0.0 | 707 |
| Msa0710160 | AT1G09890.4 | 53.205 | 624 | 276 | 10 | 55 | 666 | 14 | 633 | 0.0 | 659 |
| Msa0710160 | AT1G09890.1 | 53.140 | 621 | 275 | 10 | 58 | 666 | 1 | 617 | 0.0 | 655 |
| Msa0710160 | AT1G09890.5 | 53.045 | 624 | 272 | 11 | 55 | 666 | 14 | 628 | 0.0 | 649 |
| Msa0710160 | AT1G09890.3 | 51.235 | 648 | 276 | 11 | 55 | 666 | 14 | 657 | 0.0 | 647 |
| Msa0710160 | AT1G09910.1 | 49.681 | 626 | 301 | 7 | 52 | 667 | 54 | 675 | 0.0 | 640 |
| Msa0710160 | AT1G09910.3 | 49.681 | 626 | 301 | 7 | 52 | 667 | 11 | 632 | 0.0 | 639 |
| Msa0710160 | AT1G09910.2 | 49.681 | 626 | 301 | 7 | 52 | 667 | 11 | 632 | 0.0 | 639 |
| Msa0710160 | AT4G38030.1 | 48.851 | 653 | 303 | 12 | 27 | 666 | 31 | 665 | 0.0 | 635 |
| Msa0710160 | AT1G09880.3 | 47.478 | 674 | 326 | 10 | 12 | 667 | 41 | 704 | 0.0 | 634 |
| Msa0710160 | AT1G09880.2 | 47.478 | 674 | 326 | 10 | 12 | 667 | 27 | 690 | 0.0 | 633 |
| Msa0710160 | AT1G09880.4 | 48.250 | 657 | 317 | 9 | 29 | 667 | 7 | 658 | 0.0 | 632 |
| Msa0710160 | AT4G37950.2 | 51.094 | 640 | 288 | 10 | 42 | 666 | 47 | 676 | 0.0 | 631 |
| Msa0710160 | AT4G37950.1 | 51.094 | 640 | 288 | 10 | 42 | 666 | 47 | 676 | 0.0 | 631 |
| Msa0710160 | AT1G09880.1 | 49.522 | 628 | 295 | 8 | 58 | 667 | 1 | 624 | 0.0 | 627 |
| Msa0710160 | AT4G24430.1 | 50.702 | 641 | 293 | 11 | 43 | 665 | 4 | 639 | 0.0 | 619 |
| Msa0710160 | AT2G22620.4 | 56.275 | 510 | 212 | 4 | 46 | 548 | 52 | 557 | 0.0 | 600 |
| Msa0710160 | AT2G22620.2 | 57.873 | 489 | 200 | 4 | 183 | 668 | 112 | 597 | 0.0 | 582 |
| Msa0710160 | AT1G09890.2 | 51.887 | 530 | 217 | 9 | 55 | 549 | 14 | 540 | 0.0 | 538 |
| Msa0710160 | AT4G24430.2 | 51.527 | 524 | 242 | 8 | 151 | 665 | 1 | 521 | 0.0 | 533 |
| Msa0710160 | AT2G22620.5 | 53.256 | 430 | 188 | 5 | 46 | 468 | 52 | 475 | 1.58e-156 | 460 |
| Msa0710160 | AT1G65210.1 | 54.011 | 187 | 83 | 3 | 481 | 666 | 62 | 246 | 1.08e-59 | 201 |
Find 158 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCAACTGTTTGGGAAAT+TGG | 0.140397 | 5_1:-2138501 | Msa0710160:CDS |
| ATTCACAGGGCTATCAATTT+TGG | 0.141260 | 5_1:-2138980 | Msa0710160:intron |
| AATCAAGATTTGACTCATTT+TGG | 0.163949 | 5_1:-2137391 | Msa0710160:CDS |
| TTACCTGGTTTAATTGTAAT+TGG | 0.186445 | 5_1:+2138849 | None:intergenic |
| CACCTTTGGTCTATGTTTAT+AGG | 0.189602 | 5_1:+2140592 | None:intergenic |
| CCTAGTGTTCATTTGGTAAA+AGG | 0.192340 | 5_1:-2137437 | Msa0710160:CDS |
| TTTGATTGAATAAAATTATA+AGG | 0.246769 | 5_1:+2139316 | None:intergenic |
| CAAACAGTTGGGCCATTTCT+TGG | 0.250334 | 5_1:+2138510 | None:intergenic |
| AACTTGTTTGCATGGGTTCC+TGG | 0.258856 | 5_1:-2138900 | Msa0710160:CDS |
| ACCTTTGGTCTATGTTTATA+GGG | 0.259445 | 5_1:+2140593 | None:intergenic |
| AACCAATACAATCAAGTTAA+TGG | 0.265535 | 5_1:-2139905 | Msa0710160:CDS |
| TCTTTGCCTAATATCTGATA+TGG | 0.276974 | 5_1:+2140207 | None:intergenic |
| TTATAACAAAGTTTCCATTT+TGG | 0.284242 | 5_1:+2138946 | None:intergenic |
| AGAAGGAGAGACTTATAAAA+AGG | 0.289826 | 5_1:-2139544 | Msa0710160:CDS |
| CCATCAGATCCACAATTTAA+AGG | 0.290730 | 5_1:-2140112 | Msa0710160:CDS |
| AAGGGCATGGAGTTCTTCTA+TGG | 0.291408 | 5_1:-2140629 | Msa0710160:CDS |
| AAGTCTCTCCTTCTTGGAAT+TGG | 0.315514 | 5_1:+2139553 | None:intergenic |
| CAAGAAATGGCCCAACTGTT+TGG | 0.318768 | 5_1:-2138509 | Msa0710160:CDS |
| GAATGAGATATGATCTAAAT+AGG | 0.319866 | 5_1:+2143360 | None:intergenic |
| ATAGTGAGAAAAGGCGATTC+TGG | 0.321658 | 5_1:-2140449 | Msa0710160:CDS |
| ATTTAGATCATATCTCATTC+AGG | 0.326808 | 5_1:-2143357 | Msa0710160:intron |
| CTATTAAAGTTGATCAAATA+AGG | 0.330734 | 5_1:-2140382 | Msa0710160:CDS |
| GCGGTTGCTTGAAATTTATT+AGG | 0.331570 | 5_1:+2137981 | None:intergenic |
| TGCATGCAGCTTCAACTATA+TGG | 0.332495 | 5_1:-2140230 | Msa0710160:intron |
| ATGGAATCCATGGATTATAT+TGG | 0.336026 | 5_1:-2137478 | Msa0710160:CDS |
| TTAATAGCAGGGAATCCTTT+TGG | 0.336570 | 5_1:+2140398 | None:intergenic |
| ATCGAAAATGTACTTGAATC+TGG | 0.344312 | 5_1:-2141024 | Msa0710160:CDS |
| GTCTTAGGAATATCATATTC+TGG | 0.344765 | 5_1:-2141048 | Msa0710160:CDS |
| AAGATCAATTTAAATCTCTA+TGG | 0.348047 | 5_1:-2139479 | Msa0710160:CDS |
| ATCCATTAACTTGATTGTAT+TGG | 0.349422 | 5_1:+2139903 | None:intergenic |
| GTTAGGGTTCCACGTTGATT+AGG | 0.350575 | 5_1:+2139280 | None:intergenic |
| TACATTGGTCTAGCTTGGCC+TGG | 0.352021 | 5_1:-2139111 | Msa0710160:CDS |
| TGGACTAGAGCAGACCAAAA+TGG | 0.352907 | 5_1:-2138960 | Msa0710160:CDS |
| TACCTGCACTTCAGCATTAG+AGG | 0.353948 | 5_1:+2137887 | None:intergenic |
| GCATGGGTTCCTGGCTATAT+TGG | 0.358022 | 5_1:-2138891 | Msa0710160:CDS |
| TATGATAGGTTTAGGCAATA+TGG | 0.358897 | 5_1:-2138196 | Msa0710160:intron |
| GGACTTGAAAATGTCCGGTT+AGG | 0.360644 | 5_1:+2139263 | None:intergenic |
| TTGCAACTTTGTTTCACGTT+TGG | 0.371024 | 5_1:-2143385 | Msa0710160:CDS |
| AAGAAATGGCCCAACTGTTT+GGG | 0.377978 | 5_1:-2138508 | Msa0710160:CDS |
| GGTTTAGGCAATATGGTCTA+TGG | 0.378350 | 5_1:-2138189 | Msa0710160:CDS |
| GGAAATGAAGATGATGATAG+AGG | 0.381623 | 5_1:-2141003 | Msa0710160:CDS |
| CTAGCTTGGCCTGGGGATGC+AGG | 0.388413 | 5_1:-2139102 | Msa0710160:CDS |
| CCCCAGGATTTGCCAATGTA+AGG | 0.390036 | 5_1:+2141076 | None:intergenic |
| TGCCATGATCCTGCATCCCC+AGG | 0.390903 | 5_1:+2139093 | None:intergenic |
| TCCCTTACATTGGCAAATCC+TGG | 0.391453 | 5_1:-2141078 | Msa0710160:CDS |
| GTGACTGGAGATTGAGCATT+AGG | 0.391971 | 5_1:+2141487 | None:intergenic |
| CTTGTTGTGGTGGTACATAA+TGG | 0.394702 | 5_1:-2143410 | Msa0710160:CDS |
| TACGAGTGAATTCAAGTTGA+TGG | 0.396239 | 5_1:+2138542 | None:intergenic |
| TGTGTTAAGAGAACCGCTTC+AGG | 0.396499 | 5_1:+2140136 | None:intergenic |
| ATGAACACTAGGTACTTCTA+TGG | 0.404001 | 5_1:+2137448 | None:intergenic |
| AGATGTGAGATCTTGCTTAA+TGG | 0.407004 | 5_1:+2139805 | None:intergenic |
| ACATTGGTCTAGCTTGGCCT+GGG | 0.407469 | 5_1:-2139110 | Msa0710160:CDS |
| AGAAGTACCTAGTGTTCATT+TGG | 0.408895 | 5_1:-2137444 | Msa0710160:CDS |
| AACTTACAGAGAGGCAAGTT+GGG | 0.416244 | 5_1:+2139774 | None:intergenic |
| AATTCTCCAGCTGAGCGATC+TGG | 0.416473 | 5_1:+2138474 | None:intergenic |
| CCCTTACATTGGCAAATCCT+GGG | 0.420214 | 5_1:-2141077 | Msa0710160:CDS |
| GGTTTCAACTTTGTAGTTGA+AGG | 0.426228 | 5_1:+2137332 | None:intergenic |
| GGTTTAGAGACTAACTGGTC+TGG | 0.426955 | 5_1:+2138396 | None:intergenic |
| ATATGGCCATATCAGATATT+AGG | 0.428625 | 5_1:-2140213 | Msa0710160:CDS |
| GTATATAATCCTCCAAGAAA+TGG | 0.429167 | 5_1:-2138522 | Msa0710160:CDS |
| GAATTCAAGTAAACAAAGAT+AGG | 0.433996 | 5_1:+2139513 | None:intergenic |
| GATGTGAGATCTTGCTTAAT+GGG | 0.436016 | 5_1:+2139806 | None:intergenic |
| TATTCTCTTTGTAGTGAAGT+AGG | 0.440880 | 5_1:+2137526 | None:intergenic |
| AATCAACGTGGAACCCTAAC+CGG | 0.443227 | 5_1:-2139277 | Msa0710160:CDS |
| ATTTGATCAACTTTAATAGC+AGG | 0.447303 | 5_1:+2140386 | None:intergenic |
| ACGAGGTTAGCGTAAGGCTT+TGG | 0.452758 | 5_1:+2138444 | None:intergenic |
| GGCCTGGGGATGCAGGATCA+TGG | 0.454305 | 5_1:-2139095 | Msa0710160:CDS |
| ACTTGCAGAAGAAGCGTAAG+AGG | 0.454799 | 5_1:-2141514 | Msa0710160:intron |
| GGTCATACAACTTGTTTGCA+TGG | 0.455272 | 5_1:-2138908 | Msa0710160:CDS |
| CAGGATCTTGTTTACACAGT+TGG | 0.455563 | 5_1:-2138139 | Msa0710160:CDS |
| GTCTTGGACTTGAAAATGTC+CGG | 0.456089 | 5_1:+2139258 | None:intergenic |
| CCTTTAAATTGTGGATCTGA+TGG | 0.456767 | 5_1:+2140112 | None:intergenic |
| GTTACCTCTCCTTTAAATTG+TGG | 0.459036 | 5_1:+2140103 | None:intergenic |
| GACTTGAAAATGTCCGGTTA+GGG | 0.471746 | 5_1:+2139264 | None:intergenic |
| TCGTTAATGTATACCAGTCT+TGG | 0.472335 | 5_1:+2139242 | None:intergenic |
| TGCCAATTTCCCAAACAGTT+GGG | 0.472457 | 5_1:+2138499 | None:intergenic |
| GGCATTCCAGATCGCTCAGC+TGG | 0.474004 | 5_1:-2138480 | Msa0710160:CDS |
| GTCATACAACTTGTTTGCAT+GGG | 0.477226 | 5_1:-2138907 | Msa0710160:CDS |
| GTGGTATTCGAACGACCAAA+AGG | 0.486592 | 5_1:-2140413 | Msa0710160:CDS |
| TGGAAGATTATATTTGATCA+TGG | 0.487476 | 5_1:-2137957 | Msa0710160:CDS |
| CAGCATTAGAGGCACTTGCT+AGG | 0.490093 | 5_1:+2137898 | None:intergenic |
| ATGCCAATTTCCCAAACAGT+TGG | 0.493759 | 5_1:+2138498 | None:intergenic |
| ATTCTCTTTGTAGTGAAGTA+GGG | 0.495420 | 5_1:+2137527 | None:intergenic |
| TGCCTCTAATGCTGAAGTGC+AGG | 0.498076 | 5_1:-2137889 | Msa0710160:intron |
| AATTACCATTGCAGAGTCCA+TGG | 0.499028 | 5_1:-2140706 | Msa0710160:intron |
| TTAGTAACTATCGAAAGGAT+TGG | 0.501373 | 5_1:-2138114 | Msa0710160:CDS |
| TATAGGTATATAGTGAGAAA+AGG | 0.501871 | 5_1:-2140458 | Msa0710160:intron |
| TACGTCTTTGCCAGCATAGT+GGG | 0.502430 | 5_1:+2139581 | None:intergenic |
| TGTAGTGAAGTAGGGAGGAT+TGG | 0.502730 | 5_1:+2137535 | None:intergenic |
| ATGGACAGATGCTAAACAAA+AGG | 0.504220 | 5_1:-2139460 | Msa0710160:intron |
| TTTGTAAGCACCCACTATGC+TGG | 0.510502 | 5_1:-2139591 | Msa0710160:CDS |
| ATACCAAGGCATGGAATCCA+TGG | 0.511293 | 5_1:-2137488 | Msa0710160:CDS |
| GTTTAGAGACTAACTGGTCT+GGG | 0.514147 | 5_1:+2138397 | None:intergenic |
| TTTGATCAACTTTAATAGCA+GGG | 0.515830 | 5_1:+2140387 | None:intergenic |
| GAACTTACAGAGAGGCAAGT+TGG | 0.518644 | 5_1:+2139773 | None:intergenic |
| ATGCATACATTGGTCTAGCT+TGG | 0.520047 | 5_1:-2139116 | Msa0710160:CDS |
| AGATATTAGGCAAAGAAGAA+TGG | 0.520707 | 5_1:-2140200 | Msa0710160:CDS |
| ATGGATTCCATGCCTTGGTA+TGG | 0.521822 | 5_1:+2137490 | None:intergenic |
| AGCATTAGAGGCACTTGCTA+GGG | 0.522110 | 5_1:+2137899 | None:intergenic |
| CTCTCCTTCTTGGAATTGGA+TGG | 0.525171 | 5_1:+2139557 | None:intergenic |
| CCTTACATTGGCAAATCCTG+GGG | 0.532791 | 5_1:-2141076 | Msa0710160:CDS |
| TAATCGTCAAAATTCACAGC+AGG | 0.533295 | 5_1:-2141461 | Msa0710160:intron |
| TACTTCACTACAAAGAGAAT+AGG | 0.542664 | 5_1:-2137524 | Msa0710160:CDS |
| ACAGTTGGGCCATTTCTTGG+AGG | 0.543249 | 5_1:+2138513 | None:intergenic |
| TTTCAGGTGGTGATTAGCAA+TGG | 0.543809 | 5_1:-2141108 | Msa0710160:intron |
| AATACAATCAAGTTAATGGA+TGG | 0.547110 | 5_1:-2139901 | Msa0710160:CDS |
| TAAACAACCAATATAATCCA+TGG | 0.550594 | 5_1:+2137471 | None:intergenic |
| AATCCATGGATTCCATGCCT+TGG | 0.552884 | 5_1:+2137485 | None:intergenic |
| AGGGTTCCACGTTGATTAGG+TGG | 0.553836 | 5_1:+2139283 | None:intergenic |
| AACACAGAACGAGAATATAG+TGG | 0.554593 | 5_1:-2140665 | Msa0710160:CDS |
| AATTATATATGCAGGAGCAC+AGG | 0.555646 | 5_1:-2138005 | Msa0710160:intron |
| TTGTAATCTCCAATATAGCC+AGG | 0.558313 | 5_1:+2138882 | None:intergenic |
| TATCGACTGAACTCAAAAGT+TGG | 0.559908 | 5_1:-2139339 | Msa0710160:CDS |
| ATAAATTTCAAGCAACCGCA+TGG | 0.562804 | 5_1:-2137977 | Msa0710160:CDS |
| AGGGCATGGAGTTCTTCTAT+GGG | 0.567553 | 5_1:-2140628 | Msa0710160:CDS |
| CCATTGCGGAACTCATTACT+CGG | 0.568971 | 5_1:+2139833 | None:intergenic |
| CTCTTTGTAGTGAAGTAGGG+AGG | 0.571873 | 5_1:+2137530 | None:intergenic |
| CAGCGATTTATATCCAACTC+AGG | 0.575588 | 5_1:-2138158 | Msa0710160:CDS |
| TGAAGATGAACATGAGTGGA+CGG | 0.576125 | 5_1:-2143438 | None:intergenic |
| TTGGATATAAATCGCTGTAA+CGG | 0.579754 | 5_1:+2138164 | None:intergenic |
| GAAGATGAACATGAGTGGAC+GGG | 0.581852 | 5_1:-2143437 | None:intergenic |
| ATCATGGCAGAGAGAAAGCA+AGG | 0.584093 | 5_1:-2139079 | Msa0710160:intron |
| AGTAATGAGTTCCGCAATGG+TGG | 0.585879 | 5_1:-2139830 | Msa0710160:CDS |
| TGGCATCATGTCCCTTACAT+TGG | 0.586707 | 5_1:-2141088 | Msa0710160:CDS |
| AATGCTAAGAATGCATACAT+TGG | 0.588205 | 5_1:-2139126 | Msa0710160:CDS |
| CTACGTCTTTGCCAGCATAG+TGG | 0.588233 | 5_1:+2139580 | None:intergenic |
| GAAATGAAGATGATGATAGA+GGG | 0.589688 | 5_1:-2141002 | Msa0710160:intron |
| CCCAGGATTTGCCAATGTAA+GGG | 0.595186 | 5_1:+2141077 | None:intergenic |
| TGGTGTTAGTAACTATCGAA+AGG | 0.597830 | 5_1:-2138119 | Msa0710160:CDS |
| CGACTGAGAAACTTGTCCCA+TGG | 0.602865 | 5_1:+2140689 | None:intergenic |
| TTGATTGTATTGGTTCTCAG+TGG | 0.609971 | 5_1:+2139913 | None:intergenic |
| AGATCCACAATTTAAAGGAG+AGG | 0.612272 | 5_1:-2140107 | Msa0710160:intron |
| GATAGTGCCATACCAAGGCA+TGG | 0.612532 | 5_1:-2137497 | Msa0710160:CDS |
| ATTACCATTGCAGAGTCCAT+GGG | 0.612929 | 5_1:-2140705 | Msa0710160:intron |
| GATCATGGTGCTGTAATAAG+TGG | 0.615908 | 5_1:-2137942 | Msa0710160:CDS |
| CTGTTCACGAGGTTAGCGTA+AGG | 0.616934 | 5_1:+2138438 | None:intergenic |
| CAAGATCTCACATCTCATGT+TGG | 0.624859 | 5_1:-2139797 | Msa0710160:CDS |
| CATTGGTCTAGCTTGGCCTG+GGG | 0.625777 | 5_1:-2139109 | Msa0710160:CDS |
| TCCCTATAAACATAGACCAA+AGG | 0.628590 | 5_1:-2140594 | Msa0710160:intron |
| GACGGGTTCTCTTGTTGTGG+TGG | 0.629512 | 5_1:-2143420 | Msa0710160:CDS |
| GTGTAAACAAGATCCTGAGT+TGG | 0.634528 | 5_1:+2138145 | None:intergenic |
| CCGAGTAATGAGTTCCGCAA+TGG | 0.639316 | 5_1:-2139833 | Msa0710160:CDS |
| TCTCCAATTACAATTAAACC+AGG | 0.641476 | 5_1:-2138852 | Msa0710160:intron |
| AAAATTGGCGTATCCTGAAG+CGG | 0.641477 | 5_1:-2140149 | Msa0710160:CDS |
| TCAATGAAAGATAGAGATGA+CGG | 0.642085 | 5_1:-2140175 | Msa0710160:CDS |
| AAGATGAAGATGAACATGAG+TGG | 0.643411 | 5_1:-2143442 | None:intergenic |
| GCTTAATGGGTCCACCATTG+CGG | 0.644195 | 5_1:+2139819 | None:intergenic |
| GTGGACGGGTTCTCTTGTTG+TGG | 0.651155 | 5_1:-2143423 | Msa0710160:CDS |
| ATCAAATATAATCTTCCATG+CGG | 0.651749 | 5_1:+2137962 | None:intergenic |
| GTAGCCATCCAATTCCAAGA+AGG | 0.653857 | 5_1:-2139561 | Msa0710160:CDS |
| CTTACATTGGCAAATCCTGG+GGG | 0.661603 | 5_1:-2141075 | Msa0710160:CDS |
| GCAAACAAGTTGTATGACCC+AGG | 0.663552 | 5_1:+2138912 | None:intergenic |
| GAGATGATAGTGCCATACCA+AGG | 0.696169 | 5_1:-2137502 | Msa0710160:CDS |
| TCGTGAATAATCTGTTCACG+AGG | 0.698648 | 5_1:+2138427 | None:intergenic |
| TAGTTGAAGGACTTTCTAAG+CGG | 0.700259 | 5_1:+2137345 | None:intergenic |
| ACAGAACGAGAATATAGTGG+AGG | 0.712115 | 5_1:-2140662 | Msa0710160:CDS |
| TTCATTCCACCTAATCAACG+TGG | 0.715096 | 5_1:-2139289 | Msa0710160:CDS |
| TTACATTGGCAAATCCTGGG+GGG | 0.716231 | 5_1:-2141074 | Msa0710160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAAAAGATAAAATAAA+GGG | + | chr5_1:2137896-2137915 | None:intergenic | 10.0% |
| !! | CATATAATTTAAAAAAACAA+CGG | - | chr5_1:2138435-2138454 | Msa0710160:CDS | 10.0% |
| !!! | CATATTAGATATTTTAATTA+TGG | + | chr5_1:2139091-2139110 | None:intergenic | 10.0% |
| !! | TAATTATAAACATATTAATG+TGG | - | chr5_1:2139420-2139439 | Msa0710160:intron | 10.0% |
| !! | GAATTTATTTAATAAGAAAT+AGG | + | chr5_1:2139787-2139806 | None:intergenic | 10.0% |
| !!! | AAATAAATTCTATTCAATTT+TGG | - | chr5_1:2139797-2139816 | Msa0710160:CDS | 10.0% |
| !! | TTTGATTGAATAAAATTATA+AGG | + | chr5_1:2141448-2141467 | None:intergenic | 10.0% |
| !! | AAAAAATAGGTTTATAATTA+GGG | + | chr5_1:2142452-2142471 | None:intergenic | 10.0% |
| !! | AAAAAAATAGGTTTATAATT+AGG | + | chr5_1:2142453-2142472 | None:intergenic | 10.0% |
| !!! | AGATAATGAAATTATTTTAA+AGG | + | chr5_1:2142982-2143001 | None:intergenic | 10.0% |
| !! | AAAAGAAAGATTAAGAAATA+TGG | + | chr5_1:2137434-2137453 | None:intergenic | 15.0% |
| !! | CCATAAAAAAGATAAAATAA+AGG | + | chr5_1:2137897-2137916 | None:intergenic | 15.0% |
| !!! | CCTTTATTTTATCTTTTTTA+TGG | - | chr5_1:2137894-2137913 | Msa0710160:CDS | 15.0% |
| !! | AAAACATAGAAGATAAATAA+AGG | + | chr5_1:2137951-2137970 | None:intergenic | 15.0% |
| !!! | CTATGTTTTTTATTTTTTTG+TGG | - | chr5_1:2137962-2137981 | Msa0710160:CDS | 15.0% |
| !! | TGTCCATATATATATATATA+TGG | - | chr5_1:2138055-2138074 | Msa0710160:intron | 15.0% |
| !! | CATCCATATATATATATATA+TGG | + | chr5_1:2138061-2138080 | None:intergenic | 15.0% |
| !! | TAATCAAAATTGTGAATTAA+TGG | + | chr5_1:2138206-2138225 | None:intergenic | 15.0% |
| !!! | CGTTGTTTTTTTAAATTATA+TGG | + | chr5_1:2138437-2138456 | None:intergenic | 15.0% |
| !!! | TTTGTTGTTATACAAATATA+AGG | - | chr5_1:2138497-2138516 | Msa0710160:CDS | 15.0% |
| !!! | TTGTTGTTATACAAATATAA+GGG | - | chr5_1:2138498-2138517 | Msa0710160:CDS | 15.0% |
| !! | TAAAAATAAAGTAATTGAAC+AGG | - | chr5_1:2138879-2138898 | Msa0710160:CDS | 15.0% |
| !!! | AAAAAGGATATTTTATCTAA+AGG | - | chr5_1:2139004-2139023 | Msa0710160:intron | 15.0% |
| !!! | AAAAGGATATTTTATCTAAA+GGG | - | chr5_1:2139005-2139024 | Msa0710160:intron | 15.0% |
| !!! | GATATTTTAATTATGGTAAA+GGG | + | chr5_1:2139084-2139103 | None:intergenic | 15.0% |
| !!! | AGATATTTTAATTATGGTAA+AGG | + | chr5_1:2139085-2139104 | None:intergenic | 15.0% |
| !!! | TAAAATATCTAATATGCTTT+TGG | - | chr5_1:2139095-2139114 | Msa0710160:CDS | 15.0% |
| !!! | AATAATTTTGCCAAATAATT+GGG | + | chr5_1:2140205-2140224 | None:intergenic | 15.0% |
| !!! | TTCTCTAAGTTTTATTTTAT+CGG | + | chr5_1:2141105-2141124 | None:intergenic | 15.0% |
| !! | TTATAAAAAATATTGTACCT+GGG | - | chr5_1:2141832-2141851 | Msa0710160:intron | 15.0% |
| !!! | TGTGATATTATTTTGATTAT+TGG | + | chr5_1:2141955-2141974 | None:intergenic | 15.0% |
| !! | TAATTGTTTAGTTAATAGTT+TGG | + | chr5_1:2142039-2142058 | None:intergenic | 15.0% |
| !! | TGAAATATATATTCTATGAT+AGG | - | chr5_1:2142551-2142570 | Msa0710160:intron | 15.0% |
| !!! | TAATATATACTTGAATGTTT+TGG | - | chr5_1:2143166-2143185 | Msa0710160:intron | 15.0% |
| !! | AAATGACTCTTTATTACAAT+TGG | - | chr5_1:2138142-2138161 | Msa0710160:CDS | 20.0% |
| !! | CAATTATACTATATCAACAA+TGG | - | chr5_1:2138173-2138192 | Msa0710160:CDS | 20.0% |
| !! | TTGTATAACAACAAAAAAGA+AGG | + | chr5_1:2138492-2138511 | None:intergenic | 20.0% |
| !! | AAAAATTCAACCCTAAAAAT+CGG | - | chr5_1:2138631-2138650 | Msa0710160:intron | 20.0% |
| !! | GTAATTATTGTTAGATTGAA+TGG | + | chr5_1:2138696-2138715 | None:intergenic | 20.0% |
| !!! | AGTAATTTTATTGTTGTAGA+AGG | + | chr5_1:2138797-2138816 | None:intergenic | 20.0% |
| !!! | TACTATGCATTAAATTTGTT+AGG | - | chr5_1:2138813-2138832 | Msa0710160:intron | 20.0% |
| !!! | TATTTTATCTAAAGGGAAAT+TGG | - | chr5_1:2139012-2139031 | Msa0710160:intron | 20.0% |
| !!! | TTCTTTTGCTATTAGTTTTA+GGG | + | chr5_1:2139054-2139073 | None:intergenic | 20.0% |
| !!! | TTTCTTTTGCTATTAGTTTT+AGG | + | chr5_1:2139055-2139074 | None:intergenic | 20.0% |
| !! | AATAGGACAAATAAACAAAA+AGG | + | chr5_1:2139133-2139152 | None:intergenic | 20.0% |
| !! | TTCAATTGAAAAATAGGAAA+GGG | + | chr5_1:2139161-2139180 | None:intergenic | 20.0% |
| !! | ATTCAATTGAAAAATAGGAA+AGG | + | chr5_1:2139162-2139181 | None:intergenic | 20.0% |
| !! | TGTCAATTCAATTGAAAAAT+AGG | + | chr5_1:2139167-2139186 | None:intergenic | 20.0% |
| !! | AGGTTAATTATATACTAACT+AGG | - | chr5_1:2139320-2139339 | Msa0710160:CDS | 20.0% |
| !!! | TAGTGAAGAAATATTTTGAT+TGG | - | chr5_1:2139390-2139409 | Msa0710160:intron | 20.0% |
| !! | ATTGTAAATCTTTATATTGC+TGG | - | chr5_1:2139447-2139466 | Msa0710160:intron | 20.0% |
| !!! | GATTTTCTTAAATGATTTTC+AGG | - | chr5_1:2139637-2139656 | Msa0710160:intron | 20.0% |
| !! | TATGCTTTGTAATTATTACT+AGG | - | chr5_1:2139886-2139905 | Msa0710160:CDS | 20.0% |
| !!! | GAATAATTTTGCCAAATAAT+TGG | + | chr5_1:2140206-2140225 | None:intergenic | 20.0% |
| !!! | CTATTAAAGTTGATCAAATA+AGG | - | chr5_1:2140379-2140398 | Msa0710160:CDS | 20.0% |
| !! | ATATAACAAGAGCTAATATT+TGG | + | chr5_1:2140487-2140506 | None:intergenic | 20.0% |
| !!! | AATAGGTTTATGCTTTTTTT+TGG | - | chr5_1:2140687-2140706 | Msa0710160:CDS | 20.0% |
| !!! | ATAGGTTTATGCTTTTTTTT+GGG | - | chr5_1:2140688-2140707 | Msa0710160:CDS | 20.0% |
| !! | AGGTTTATATTATTAGTACA+TGG | - | chr5_1:2140742-2140761 | Msa0710160:intron | 20.0% |
| !! | CATGCAAATAAATTTATGAA+TGG | - | chr5_1:2140787-2140806 | Msa0710160:intron | 20.0% |
| !!! | TTTTATTTTATCGGTGAAAT+TGG | + | chr5_1:2141096-2141115 | None:intergenic | 20.0% |
| !!! | AGACTTATAAAAAGGTTTTT+GGG | - | chr5_1:2141225-2141244 | Msa0710160:intron | 20.0% |
| !! | AAGATCAATTTAAATCTCTA+TGG | - | chr5_1:2141282-2141301 | Msa0710160:intron | 20.0% |
| !! | TTTCTTTACCATATTCATTA+GGG | - | chr5_1:2141598-2141617 | Msa0710160:intron | 20.0% |
| !! | TGAATTATATACAAATTCAC+AGG | - | chr5_1:2141767-2141786 | Msa0710160:intron | 20.0% |
| !! | GAATTATATACAAATTCACA+GGG | - | chr5_1:2141768-2141787 | Msa0710160:intron | 20.0% |
| !!! | TTATAACAAAGTTTCCATTT+TGG | + | chr5_1:2141818-2141837 | None:intergenic | 20.0% |
| !! | GTTATAAAAAATATTGTACC+TGG | - | chr5_1:2141831-2141850 | Msa0710160:intron | 20.0% |
| !! | AGAGTTGTTATATATAAAGA+AGG | - | chr5_1:2142481-2142500 | Msa0710160:intron | 20.0% |
| !! | GAGTTGTTATATATAAAGAA+GGG | - | chr5_1:2142482-2142501 | Msa0710160:intron | 20.0% |
| !! | ATATATTCTATGATAGGTTT+AGG | - | chr5_1:2142557-2142576 | Msa0710160:intron | 20.0% |
| !! | TAAACTTCAATTATATATGC+AGG | - | chr5_1:2142748-2142767 | Msa0710160:intron | 20.0% |
| !! | GAGAATATATTATCTTACAT+CGG | + | chr5_1:2143141-2143160 | None:intergenic | 20.0% |
| ! | GAATGAGATATGATCTAAAT+AGG | + | chr5_1:2137404-2137423 | None:intergenic | 25.0% |
| ! | ATTTAGATCATATCTCATTC+AGG | - | chr5_1:2137404-2137423 | Msa0710160:CDS | 25.0% |
| !!! | CTGCTTACAGTTTTAAATAA+CGG | - | chr5_1:2137565-2137584 | Msa0710160:intron | 25.0% |
| !!! | CATTTTTAAACAAAGGTATG+CGG | + | chr5_1:2137722-2137741 | None:intergenic | 25.0% |
| !! | ATGTAATCCTTCTCTATTTT+TGG | + | chr5_1:2137778-2137797 | None:intergenic | 25.0% |
| !! | CCATGATTCTTCTATTTTAT+TGG | + | chr5_1:2137818-2137837 | None:intergenic | 25.0% |
| ! | CCAATAAAATAGAAGAATCA+TGG | - | chr5_1:2137815-2137834 | Msa0710160:intron | 25.0% |
| !!! | AGAATCATGGTTTTAGTATA+TGG | - | chr5_1:2137828-2137847 | Msa0710160:intron | 25.0% |
| !!! | AATTTTTTCTGAGAAGACAT+GGG | + | chr5_1:2137860-2137879 | None:intergenic | 25.0% |
| !!! | AAATTTTTTCTGAGAAGACA+TGG | + | chr5_1:2137861-2137880 | None:intergenic | 25.0% |
| ! | TCTTTATTACAATTGGATAC+AGG | - | chr5_1:2138149-2138168 | Msa0710160:CDS | 25.0% |
| ! | ACAGTAAAAGTAAAGTCTAT+AGG | + | chr5_1:2138273-2138292 | None:intergenic | 25.0% |
| ! | AATAAAATCATAGTGCTTTG+AGG | + | chr5_1:2138323-2138342 | None:intergenic | 25.0% |
| !!! | ATCTTACAAACCGATTTTTA+GGG | + | chr5_1:2138644-2138663 | None:intergenic | 25.0% |
| ! | AAAAAAAAACATGACACTTC+TGG | + | chr5_1:2138772-2138791 | None:intergenic | 25.0% |
| ! | TCAATTGAAAAATAGGAAAG+GGG | + | chr5_1:2139160-2139179 | None:intergenic | 25.0% |
| ! | CTGCAATGTAACAAATTTAA+AGG | + | chr5_1:2139524-2139543 | None:intergenic | 25.0% |
| ! | AAACTGCGATTAAAAAAGAT+AGG | - | chr5_1:2139560-2139579 | Msa0710160:CDS | 25.0% |
| !!! | TTTCTTAAATGATTTTCAGG+TGG | - | chr5_1:2139640-2139659 | Msa0710160:intron | 25.0% |
| ! | TGTTAATGAATATAAGCTTG+TGG | + | chr5_1:2139832-2139851 | None:intergenic | 25.0% |
| ! | ACAAAGCATAATTATGTCAA+TGG | + | chr5_1:2139876-2139895 | None:intergenic | 25.0% |
| !!! | TTTTTGGCAAAACATTTCAA+AGG | - | chr5_1:2139922-2139941 | Msa0710160:CDS | 25.0% |
| ! | TTATTCATGAACATGTTTCT+TGG | - | chr5_1:2140220-2140239 | Msa0710160:CDS | 25.0% |
| ! | TATAGGTATATAGTGAGAAA+AGG | - | chr5_1:2140303-2140322 | Msa0710160:intron | 25.0% |
| ! | TTTGATCAACTTTAATAGCA+GGG | + | chr5_1:2140377-2140396 | None:intergenic | 25.0% |
| ! | ATTTGATCAACTTTAATAGC+AGG | + | chr5_1:2140378-2140397 | None:intergenic | 25.0% |
| !!! | AACACTTTTTTTTTGTTACC+TGG | + | chr5_1:2140427-2140446 | None:intergenic | 25.0% |
| ! | AACCAATACAATCAAGTTAA+TGG | - | chr5_1:2140856-2140875 | Msa0710160:CDS | 25.0% |
| !! | ATCCATTAACTTGATTGTAT+TGG | + | chr5_1:2140861-2140880 | None:intergenic | 25.0% |
| ! | AATACAATCAAGTTAATGGA+TGG | - | chr5_1:2140860-2140879 | Msa0710160:intron | 25.0% |
| !! | GAGACTTATAAAAAGGTTTT+TGG | - | chr5_1:2141224-2141243 | Msa0710160:intron | 25.0% |
| ! | GAATTCAAGTAAACAAAGAT+AGG | + | chr5_1:2141251-2141270 | None:intergenic | 25.0% |
| ! | GGGAGTAAATAAATAAATCA+TGG | + | chr5_1:2141349-2141368 | None:intergenic | 25.0% |
| ! | GTCATTGCATACTAATAAAT+GGG | + | chr5_1:2141369-2141388 | None:intergenic | 25.0% |
| ! | TGTCATTGCATACTAATAAA+TGG | + | chr5_1:2141370-2141389 | None:intergenic | 25.0% |
| ! | CTTTCTTTACCATATTCATT+AGG | - | chr5_1:2141597-2141616 | Msa0710160:intron | 25.0% |
| ! | TTCTTTACCATATTCATTAG+GGG | - | chr5_1:2141599-2141618 | Msa0710160:intron | 25.0% |
| ! | TTACCTGGTTTAATTGTAAT+TGG | + | chr5_1:2141915-2141934 | None:intergenic | 25.0% |
| ! | ATTTATTTGCAAACTTTACC+TGG | + | chr5_1:2141930-2141949 | None:intergenic | 25.0% |
| !! | CGTCACTAGTAATAATTTTT+CGG | + | chr5_1:2141984-2142003 | None:intergenic | 25.0% |
| ! | GTAACAATGTGTATATATGT+AGG | - | chr5_1:2142191-2142210 | Msa0710160:intron | 25.0% |
| ! | GAACGTCAACTATTTAATAA+TGG | + | chr5_1:2142389-2142408 | None:intergenic | 25.0% |
| !! | ATATATTTCATTCGAGTTAG+TGG | + | chr5_1:2142541-2142560 | None:intergenic | 25.0% |
| ! | ATCAAATATAATCTTCCATG+CGG | + | chr5_1:2142802-2142821 | None:intergenic | 25.0% |
| ! | TGGAAGATTATATTTGATCA+TGG | - | chr5_1:2142804-2142823 | Msa0710160:intron | 25.0% |
| ! | GAGGACTGAAAATATATTTA+GGG | + | chr5_1:2142933-2142952 | None:intergenic | 25.0% |
| ! | TATTGGTAAAACTTTCTTTG+TGG | + | chr5_1:2143109-2143128 | None:intergenic | 25.0% |
| ! | TAAACAACCAATATAATCCA+TGG | + | chr5_1:2143293-2143312 | None:intergenic | 25.0% |
| !! | AATCAAGATTTGACTCATTT+TGG | - | chr5_1:2143370-2143389 | Msa0710160:CDS | 25.0% |
| TAGAGAATCACAATCAAATG+CGG | - | chr5_1:2137629-2137648 | Msa0710160:intron | 30.0% | |
| TTCAAATTGCAACACAATCA+CGG | + | chr5_1:2137670-2137689 | None:intergenic | 30.0% | |
| TTTGAACAACCATTACATTG+CGG | - | chr5_1:2137684-2137703 | Msa0710160:intron | 30.0% | |
| ! | GCATGCACATTTTTAAACAA+AGG | + | chr5_1:2137729-2137748 | None:intergenic | 30.0% |
| !!! | AATCCTTCTCTATTTTTGGT+AGG | + | chr5_1:2137774-2137793 | None:intergenic | 30.0% |
| !!! | ATCATGGTTTTAGTATATGG+TGG | - | chr5_1:2137831-2137850 | Msa0710160:intron | 30.0% |
| CAAATCAATAGTTGAACATC+TGG | - | chr5_1:2138521-2138540 | Msa0710160:CDS | 30.0% | |
| ! | AGAGTTTATTCAAGTTCTGT+TGG | + | chr5_1:2138587-2138606 | None:intergenic | 30.0% |
| ACTCTGACCAAATCATAATT+TGG | - | chr5_1:2138602-2138621 | Msa0710160:intron | 30.0% | |
| CTCTGACCAAATCATAATTT+GGG | - | chr5_1:2138603-2138622 | Msa0710160:intron | 30.0% | |
| !! | CATCTTACAAACCGATTTTT+AGG | + | chr5_1:2138645-2138664 | None:intergenic | 30.0% |
| ! | ACTTCTGGAGGTTATATATA+TGG | + | chr5_1:2138757-2138776 | None:intergenic | 30.0% |
| AGTAATTGAACAGGATGTAT+AGG | - | chr5_1:2138888-2138907 | Msa0710160:CDS | 30.0% | |
| AGAATAACGATATTTGCACT+TGG | + | chr5_1:2138921-2138940 | None:intergenic | 30.0% | |
| AGATTCCAATATTCCAGTAT+AGG | - | chr5_1:2138976-2138995 | Msa0710160:intron | 30.0% | |
| TTTATCTAAAGGGAAATTGG+AGG | - | chr5_1:2139015-2139034 | Msa0710160:intron | 30.0% | |
| ! | TTTTGACGATTAATAGTGAC+TGG | + | chr5_1:2139292-2139311 | None:intergenic | 30.0% |
| ATATTGCTGGAAAAATCCAA+CGG | - | chr5_1:2139460-2139479 | Msa0710160:intron | 30.0% | |
| GTCTTAGGAATATCATATTC+TGG | - | chr5_1:2139713-2139732 | Msa0710160:intron | 30.0% | |
| ATCGAAAATGTACTTGAATC+TGG | - | chr5_1:2139737-2139756 | Msa0710160:intron | 30.0% | |
| GAAATGAAGATGATGATAGA+GGG | - | chr5_1:2139759-2139778 | Msa0710160:intron | 30.0% | |
| !! | TAGTGGAGGTTTCATTTTTA+AGG | - | chr5_1:2140113-2140132 | Msa0710160:CDS | 30.0% |
| !! | AGTGGAGGTTTCATTTTTAA+GGG | - | chr5_1:2140114-2140133 | Msa0710160:CDS | 30.0% |
| ACCTTTGGTCTATGTTTATA+GGG | + | chr5_1:2140171-2140190 | None:intergenic | 30.0% | |
| AAATCCTAGTCCCAATTATT+TGG | - | chr5_1:2140192-2140211 | Msa0710160:CDS | 30.0% | |
| ATATGGCCATATCAGATATT+AGG | - | chr5_1:2140548-2140567 | Msa0710160:intron | 30.0% | |
| TCTTTGCCTAATATCTGATA+TGG | + | chr5_1:2140557-2140576 | None:intergenic | 30.0% | |
| AGATATTAGGCAAAGAAGAA+TGG | - | chr5_1:2140561-2140580 | Msa0710160:intron | 30.0% | |
| TCAATGAAAGATAGAGATGA+CGG | - | chr5_1:2140586-2140605 | Msa0710160:intron | 30.0% | |
| GGAGAGGTAACTAAATAAAT+AGG | - | chr5_1:2140670-2140689 | Msa0710160:CDS | 30.0% | |
| ATTAATAGCACCAAATTGAG+TGG | + | chr5_1:2140722-2140741 | None:intergenic | 30.0% | |
| !! | CTCAATTTGGTGCTATTAAT+AGG | - | chr5_1:2140722-2140741 | Msa0710160:intron | 30.0% |
| TAAGTTCAACACATCAAAGA+TGG | - | chr5_1:2141004-2141023 | Msa0710160:CDS | 30.0% | |
| AAGTTCAACACATCAAAGAT+GGG | - | chr5_1:2141005-2141024 | Msa0710160:CDS | 30.0% | |
| ! | TTTTATAAGTCTCTCCTTCT+TGG | + | chr5_1:2141217-2141236 | None:intergenic | 30.0% |
| AGAAGGAGAGACTTATAAAA+AGG | - | chr5_1:2141217-2141236 | Msa0710160:intron | 30.0% | |
| TCTTTACCATATTCATTAGG+GGG | - | chr5_1:2141600-2141619 | Msa0710160:intron | 30.0% | |
| AATGCTAAGAATGCATACAT+TGG | - | chr5_1:2141635-2141654 | Msa0710160:intron | 30.0% | |
| TCTCCAATTACAATTAAACC+AGG | - | chr5_1:2141909-2141928 | Msa0710160:intron | 30.0% | |
| GTATATAATCCTCCAAGAAA+TGG | - | chr5_1:2142239-2142258 | Msa0710160:intron | 30.0% | |
| ATAATGGTTTAGAGACTAAC+TGG | + | chr5_1:2142373-2142392 | None:intergenic | 30.0% | |
| ! | CTCTTTTGCGCTAAAAAAAT+AGG | + | chr5_1:2142465-2142484 | None:intergenic | 30.0% |
| TATATATAAAGAAGGGACAG+AGG | - | chr5_1:2142489-2142508 | Msa0710160:intron | 30.0% | |
| TATGATAGGTTTAGGCAATA+TGG | - | chr5_1:2142565-2142584 | Msa0710160:intron | 30.0% | |
| TTGGATATAAATCGCTGTAA+CGG | + | chr5_1:2142600-2142619 | None:intergenic | 30.0% | |
| TTAGTAACTATCGAAAGGAT+TGG | - | chr5_1:2142647-2142666 | Msa0710160:intron | 30.0% | |
| ! | CTTGTTTAAGTGTCATGTTT+TGG | - | chr5_1:2142723-2142742 | Msa0710160:intron | 30.0% |
| CGAGGACTGAAAATATATTT+AGG | + | chr5_1:2142934-2142953 | None:intergenic | 30.0% | |
| ! | TATTTTCAGTCCTCGAAATA+CGG | - | chr5_1:2142939-2142958 | Msa0710160:intron | 30.0% |
| ! | AATACGGTAGTTATTGCTTT+TGG | - | chr5_1:2142955-2142974 | Msa0710160:intron | 30.0% |
| TACATCGGTGTATACTTTAT+TGG | + | chr5_1:2143126-2143145 | None:intergenic | 30.0% | |
| ATTCTCTTTGTAGTGAAGTA+GGG | + | chr5_1:2143237-2143256 | None:intergenic | 30.0% | |
| TATTCTCTTTGTAGTGAAGT+AGG | + | chr5_1:2143238-2143257 | None:intergenic | 30.0% | |
| TACTTCACTACAAAGAGAAT+AGG | - | chr5_1:2143237-2143256 | Msa0710160:intron | 30.0% | |
| ! | ATGGAATCCATGGATTATAT+TGG | - | chr5_1:2143283-2143302 | Msa0710160:intron | 30.0% |
| ! | TTGCAACTTTGTTTCACGTT+TGG | - | chr5_1:2137376-2137395 | Msa0710160:CDS | 35.0% |
| GAAGCAAGATCAAGCAAATA+TGG | + | chr5_1:2137465-2137484 | None:intergenic | 35.0% | |
| CTTCCTACCAAAAATAGAGA+AGG | - | chr5_1:2137768-2137787 | Msa0710160:intron | 35.0% | |
| ! | ACTATATGAGAGTGTGTCAT+GGG | + | chr5_1:2138350-2138369 | None:intergenic | 35.0% |
| ! | TACTATATGAGAGTGTGTCA+TGG | + | chr5_1:2138351-2138370 | None:intergenic | 35.0% |
| GCGATGACTTGATATATAGT+AGG | - | chr5_1:2138557-2138576 | Msa0710160:intron | 35.0% | |
| GACCAAATCATAATTTGGGT+CGG | - | chr5_1:2138607-2138626 | Msa0710160:intron | 35.0% | |
| TTCCGACCCAAATTATGATT+TGG | + | chr5_1:2138612-2138631 | None:intergenic | 35.0% | |
| GCATAAAAAAGAAGCTGAAG+AGG | - | chr5_1:2138723-2138742 | Msa0710160:intron | 35.0% | |
| AAAAAACATGACACTTCTGG+AGG | + | chr5_1:2138769-2138788 | None:intergenic | 35.0% | |
| ! | TCGTTATTCTGTCACTTCTA+AGG | - | chr5_1:2138931-2138950 | Msa0710160:CDS | 35.0% |
| ! | CGTTATTCTGTCACTTCTAA+GGG | - | chr5_1:2138932-2138951 | Msa0710160:CDS | 35.0% |
| ! | GTTATTCTGTCACTTCTAAG+GGG | - | chr5_1:2138933-2138952 | Msa0710160:CDS | 35.0% |
| AGCAACCTATACTGGAATAT+TGG | + | chr5_1:2138984-2139003 | None:intergenic | 35.0% | |
| TCCAGTATAGGTTGCTAAAA+AGG | - | chr5_1:2138988-2139007 | Msa0710160:intron | 35.0% | |
| !! | TCCTTTTTAGCAACCTATAC+TGG | + | chr5_1:2138992-2139011 | None:intergenic | 35.0% |
| AATAGGAAAGGGGAAACAAT+AGG | + | chr5_1:2139150-2139169 | None:intergenic | 35.0% | |
| TAATCGTCAAAATTCACAGC+AGG | - | chr5_1:2139300-2139319 | Msa0710160:CDS | 35.0% | |
| TAAAGGTTTCTACAACGACA+TGG | + | chr5_1:2139507-2139526 | None:intergenic | 35.0% | |
| GGAAATGAAGATGATGATAG+AGG | - | chr5_1:2139758-2139777 | Msa0710160:intron | 35.0% | |
| !! | AGGTACTTTGACGTTGTTTT+TGG | - | chr5_1:2139906-2139925 | Msa0710160:CDS | 35.0% |
| AACACAGAACGAGAATATAG+TGG | - | chr5_1:2140096-2140115 | Msa0710160:intron | 35.0% | |
| !! | AGGTTTCATTTTTAAGGGCA+TGG | - | chr5_1:2140119-2140138 | Msa0710160:CDS | 35.0% |
| TCCCTATAAACATAGACCAA+AGG | - | chr5_1:2140167-2140186 | Msa0710160:CDS | 35.0% | |
| CACCTTTGGTCTATGTTTAT+AGG | + | chr5_1:2140172-2140191 | None:intergenic | 35.0% | |
| TTTGCCAAATAATTGGGACT+AGG | + | chr5_1:2140199-2140218 | None:intergenic | 35.0% | |
| ! | TTCTGGATTTTACACTTACG+TGG | - | chr5_1:2140329-2140348 | Msa0710160:intron | 35.0% |
| ! | TTAATAGCAGGGAATCCTTT+TGG | + | chr5_1:2140366-2140385 | None:intergenic | 35.0% |
| ! | TAGAGATGACGGTCAAAAAT+TGG | - | chr5_1:2140597-2140616 | Msa0710160:CDS | 35.0% |
| CCTTTAAATTGTGGATCTGA+TGG | + | chr5_1:2140652-2140671 | None:intergenic | 35.0% | |
| CCATCAGATCCACAATTTAA+AGG | - | chr5_1:2140649-2140668 | Msa0710160:CDS | 35.0% | |
| AGATCCACAATTTAAAGGAG+AGG | - | chr5_1:2140654-2140673 | Msa0710160:CDS | 35.0% | |
| GTTACCTCTCCTTTAAATTG+TGG | + | chr5_1:2140661-2140680 | None:intergenic | 35.0% | |
| GAATGGTTTATGTTGCACTT+AGG | - | chr5_1:2140804-2140823 | Msa0710160:intron | 35.0% | |
| !! | TTGATTGTATTGGTTCTCAG+TGG | + | chr5_1:2140851-2140870 | None:intergenic | 35.0% |
| TGTTATGATCCAAAAACCCA+CGG | + | chr5_1:2140908-2140927 | None:intergenic | 35.0% | |
| GATGTGAGATCTTGCTTAAT+GGG | + | chr5_1:2140958-2140977 | None:intergenic | 35.0% | |
| AGATGTGAGATCTTGCTTAA+TGG | + | chr5_1:2140959-2140978 | None:intergenic | 35.0% | |
| ! | ACATATCGTCAGTTTAGTTC+TGG | - | chr5_1:2141058-2141077 | Msa0710160:CDS | 35.0% |
| ATGGACAGATGCTAAACAAA+AGG | - | chr5_1:2141301-2141320 | Msa0710160:intron | 35.0% | |
| ! | TATCGACTGAACTCAAAAGT+TGG | - | chr5_1:2141422-2141441 | Msa0710160:intron | 35.0% |
| TCGTTAATGTATACCAGTCT+TGG | + | chr5_1:2141522-2141541 | None:intergenic | 35.0% | |
| CTTTACCATATTCATTAGGG+GGG | - | chr5_1:2141601-2141620 | Msa0710160:intron | 35.0% | |
| TTTACCATATTCATTAGGGG+GGG | - | chr5_1:2141602-2141621 | Msa0710160:intron | 35.0% | |
| ! | ATTCACAGGGCTATCAATTT+TGG | - | chr5_1:2141781-2141800 | Msa0710160:intron | 35.0% |
| ! | GTCATACAACTTGTTTGCAT+GGG | - | chr5_1:2141854-2141873 | Msa0710160:intron | 35.0% |
| TTGTAATCTCCAATATAGCC+AGG | + | chr5_1:2141882-2141901 | None:intergenic | 35.0% | |
| TACAAACTAATTGCGTCTCT+AGG | - | chr5_1:2142094-2142113 | Msa0710160:intron | 35.0% | |
| !! | TACGAGTGAATTCAAGTTGA+TGG | + | chr5_1:2142222-2142241 | None:intergenic | 35.0% |
| ! | TGGTGTTAGTAACTATCGAA+AGG | - | chr5_1:2142642-2142661 | Msa0710160:intron | 35.0% |
| CAACAGAAAGCTAATTACCT+TGG | + | chr5_1:2142688-2142707 | None:intergenic | 35.0% | |
| ! | AATTATATATGCAGGAGCAC+AGG | - | chr5_1:2142756-2142775 | Msa0710160:intron | 35.0% |
| GCGGTTGCTTGAAATTTATT+AGG | + | chr5_1:2142783-2142802 | None:intergenic | 35.0% | |
| ATAAATTTCAAGCAACCGCA+TGG | - | chr5_1:2142784-2142803 | Msa0710160:intron | 35.0% | |
| ATGAACACTAGGTACTTCTA+TGG | + | chr5_1:2143316-2143335 | None:intergenic | 35.0% | |
| !! | AGAAGTACCTAGTGTTCATT+TGG | - | chr5_1:2143317-2143336 | Msa0710160:intron | 35.0% |
| ! | CCTTTTACCAAATGAACACT+AGG | + | chr5_1:2143327-2143346 | None:intergenic | 35.0% |
| CCTAGTGTTCATTTGGTAAA+AGG | - | chr5_1:2143324-2143343 | Msa0710160:intron | 35.0% | |
| !! | AGATTTGACTCATTTTGGCA+AGG | - | chr5_1:2143375-2143394 | Msa0710160:CDS | 35.0% |
| TAGTTGAAGGACTTTCTAAG+CGG | + | chr5_1:2143419-2143438 | None:intergenic | 35.0% | |
| GGTTTCAACTTTGTAGTTGA+AGG | + | chr5_1:2143432-2143451 | None:intergenic | 35.0% | |
| ! | CTTGTTGTGGTGGTACATAA+TGG | - | chr5_1:2137351-2137370 | Msa0710160:CDS | 40.0% |
| GGTTGCACTAACAATTGCAA+CGG | - | chr5_1:2137586-2137605 | Msa0710160:intron | 40.0% | |
| CAATCTGAACCGCAATGTAA+TGG | + | chr5_1:2137696-2137715 | None:intergenic | 40.0% | |
| AGTGAAATGTTGCATGCAGA+TGG | + | chr5_1:2137922-2137941 | None:intergenic | 40.0% | |
| !! | AGGAGCATTCAATGTGTATG+TGG | + | chr5_1:2138303-2138322 | None:intergenic | 40.0% |
| ! | TTTCAGGTGGTGATTAGCAA+TGG | - | chr5_1:2139653-2139672 | Msa0710160:intron | 40.0% |
| AATTACCATTGCAGAGTCCA+TGG | - | chr5_1:2140055-2140074 | Msa0710160:intron | 40.0% | |
| ATTACCATTGCAGAGTCCAT+GGG | - | chr5_1:2140056-2140075 | Msa0710160:intron | 40.0% | |
| ACAGAACGAGAATATAGTGG+AGG | - | chr5_1:2140099-2140118 | Msa0710160:intron | 40.0% | |
| ATAGTGAGAAAAGGCGATTC+TGG | - | chr5_1:2140312-2140331 | Msa0710160:intron | 40.0% | |
| !! | AAGGACCGTTTTTAAACCCA+AGG | - | chr5_1:2140398-2140417 | Msa0710160:CDS | 40.0% |
| GGCTTCCTTGGGTTTAAAAA+CGG | + | chr5_1:2140406-2140425 | None:intergenic | 40.0% | |
| ! | TTTTTAAACCCAAGGAAGCC+AGG | - | chr5_1:2140406-2140425 | Msa0710160:CDS | 40.0% |
| ! | TTTTGTTACCTGGCTTCCTT+GGG | + | chr5_1:2140417-2140436 | None:intergenic | 40.0% |
| ! | TTTTTGTTACCTGGCTTCCT+TGG | + | chr5_1:2140418-2140437 | None:intergenic | 40.0% |
| TGCATGCAGCTTCAACTATA+TGG | - | chr5_1:2140531-2140550 | Msa0710160:intron | 40.0% | |
| AAAATTGGCGTATCCTGAAG+CGG | - | chr5_1:2140612-2140631 | Msa0710160:CDS | 40.0% | |
| !! | GGTGTCATTTCCACTCAATT+TGG | - | chr5_1:2140709-2140728 | Msa0710160:intron | 40.0% |
| TGGTTTATGTTGCACTTAGG+TGG | - | chr5_1:2140807-2140826 | Msa0710160:intron | 40.0% | |
| GTTATGATCCAAAAACCCAC+GGG | + | chr5_1:2140907-2140926 | None:intergenic | 40.0% | |
| CAAGATCTCACATCTCATGT+TGG | - | chr5_1:2140964-2140983 | Msa0710160:intron | 40.0% | |
| AACTTACAGAGAGGCAAGTT+GGG | + | chr5_1:2140990-2141009 | None:intergenic | 40.0% | |
| GATGTGTTGAACTTACAGAG+AGG | + | chr5_1:2140999-2141018 | None:intergenic | 40.0% | |
| AAGTCTCTCCTTCTTGGAAT+TGG | + | chr5_1:2141211-2141230 | None:intergenic | 40.0% | |
| TTCATTCCACCTAATCAACG+TGG | - | chr5_1:2141472-2141491 | Msa0710160:CDS | 40.0% | |
| GACTTGAAAATGTCCGGTTA+GGG | + | chr5_1:2141500-2141519 | None:intergenic | 40.0% | |
| GTCTTGGACTTGAAAATGTC+CGG | + | chr5_1:2141506-2141525 | None:intergenic | 40.0% | |
| !!! | GACATTTTCAAGTCCAAGAC+TGG | - | chr5_1:2141506-2141525 | Msa0710160:CDS | 40.0% |
| ! | ATGCATACATTGGTCTAGCT+TGG | - | chr5_1:2141645-2141664 | Msa0710160:intron | 40.0% |
| ! | GGTCATACAACTTGTTTGCA+TGG | - | chr5_1:2141853-2141872 | Msa0710160:intron | 40.0% |
| AAGAAATGGCCCAACTGTTT+GGG | - | chr5_1:2142253-2142272 | Msa0710160:intron | 40.0% | |
| TGCCAATTTCCCAAACAGTT+GGG | + | chr5_1:2142265-2142284 | None:intergenic | 40.0% | |
| ATGCCAATTTCCCAAACAGT+TGG | + | chr5_1:2142266-2142285 | None:intergenic | 40.0% | |
| TCGTGAATAATCTGTTCACG+AGG | + | chr5_1:2142337-2142356 | None:intergenic | 40.0% | |
| ! | GTTTAGAGACTAACTGGTCT+GGG | + | chr5_1:2142367-2142386 | None:intergenic | 40.0% |
| GGACAGAGATAGTAGAAACT+GGG | + | chr5_1:2142431-2142450 | None:intergenic | 40.0% | |
| ATATAAAGAAGGGACAGAGG+TGG | - | chr5_1:2142492-2142511 | Msa0710160:intron | 40.0% | |
| GGTTTAGGCAATATGGTCTA+TGG | - | chr5_1:2142572-2142591 | Msa0710160:intron | 40.0% | |
| CAGCGATTTATATCCAACTC+AGG | - | chr5_1:2142603-2142622 | Msa0710160:intron | 40.0% | |
| GTGTAAACAAGATCCTGAGT+TGG | + | chr5_1:2142619-2142638 | None:intergenic | 40.0% | |
| ! | CAGGATCTTGTTTACACAGT+TGG | - | chr5_1:2142622-2142641 | Msa0710160:intron | 40.0% |
| !! | GGTTTTATGCTCATGTTCCA+AGG | - | chr5_1:2142668-2142687 | Msa0710160:intron | 40.0% |
| !! | GATCATGGTGCTGTAATAAG+TGG | - | chr5_1:2142819-2142838 | Msa0710160:intron | 40.0% |
| GCAATAACTACCGTATTTCG+AGG | + | chr5_1:2142952-2142971 | None:intergenic | 40.0% | |
| ACTGACAAGCATCATAGAGA+GGG | + | chr5_1:2143044-2143063 | None:intergenic | 40.0% | |
| GTCAGTCATGTATCTCTATG+TGG | - | chr5_1:2143058-2143077 | Msa0710160:intron | 40.0% | |
| !! | GTTTTGGATGATGTGTGATC+AGG | - | chr5_1:2143182-2143201 | Msa0710160:intron | 40.0% |
| TTGCAACACAATCACGGTTG+AGG | + | chr5_1:2137664-2137683 | None:intergenic | 45.0% | |
| AGATGGTGCAGGGGAATATT+TGG | + | chr5_1:2138026-2138045 | None:intergenic | 45.0% | |
| TATGGACACACACTGTCAGA+TGG | + | chr5_1:2138043-2138062 | None:intergenic | 45.0% | |
| ! | ATATGAGAGTGTGTCATGGG+TGG | + | chr5_1:2138347-2138366 | None:intergenic | 45.0% |
| ! | ATTCTGTCACTTCTAAGGGG+TGG | - | chr5_1:2138936-2138955 | Msa0710160:CDS | 45.0% |
| CTGCAAGTGGAAACAATGCA+AGG | + | chr5_1:2139235-2139254 | None:intergenic | 45.0% | |
| TCTTACGCTTCTTCTGCAAG+TGG | + | chr5_1:2139248-2139267 | None:intergenic | 45.0% | |
| ! | ACTTGCAGAAGAAGCGTAAG+AGG | - | chr5_1:2139247-2139266 | Msa0710160:intron | 45.0% |
| GTGACTGGAGATTGAGCATT+AGG | + | chr5_1:2139277-2139296 | None:intergenic | 45.0% | |
| ! | GCAGTTTGAAGTCACAACTG+TGG | + | chr5_1:2139547-2139566 | None:intergenic | 45.0% |
| TGGCATCATGTCCCTTACAT+TGG | - | chr5_1:2139673-2139692 | Msa0710160:intron | 45.0% | |
| TCCCTTACATTGGCAAATCC+TGG | - | chr5_1:2139683-2139702 | Msa0710160:intron | 45.0% | |
| CCCAGGATTTGCCAATGTAA+GGG | + | chr5_1:2139687-2139706 | None:intergenic | 45.0% | |
| CCCTTACATTGGCAAATCCT+GGG | - | chr5_1:2139684-2139703 | Msa0710160:intron | 45.0% | |
| CCTTACATTGGCAAATCCTG+GGG | - | chr5_1:2139685-2139704 | Msa0710160:intron | 45.0% | |
| CTTACATTGGCAAATCCTGG+GGG | - | chr5_1:2139686-2139705 | Msa0710160:intron | 45.0% | |
| TTACATTGGCAAATCCTGGG+GGG | - | chr5_1:2139687-2139706 | Msa0710160:intron | 45.0% | |
| ! | AAGGGCATGGAGTTCTTCTA+TGG | - | chr5_1:2140132-2140151 | Msa0710160:CDS | 45.0% |
| AGGGCATGGAGTTCTTCTAT+GGG | - | chr5_1:2140133-2140152 | Msa0710160:CDS | 45.0% | |
| TGGGACTAGGATTTCACCTT+TGG | + | chr5_1:2140186-2140205 | None:intergenic | 45.0% | |
| GTGGTATTCGAACGACCAAA+AGG | - | chr5_1:2140348-2140367 | Msa0710160:intron | 45.0% | |
| GTTGAAGCTGCATGCATCAT+TGG | + | chr5_1:2140527-2140546 | None:intergenic | 45.0% | |
| TGTGTTAAGAGAACCGCTTC+AGG | + | chr5_1:2140628-2140647 | None:intergenic | 45.0% | |
| !! | CACGGGTTTTTCAGAATCTG+CGG | + | chr5_1:2140890-2140909 | None:intergenic | 45.0% |
| ! | GCAGATTCTGAAAAACCCGT+GGG | - | chr5_1:2140889-2140908 | Msa0710160:intron | 45.0% |
| ! | CTGAAAAACCCGTGGGTTTT+TGG | - | chr5_1:2140896-2140915 | Msa0710160:intron | 45.0% |
| CCATTGCGGAACTCATTACT+CGG | + | chr5_1:2140931-2140950 | None:intergenic | 45.0% | |
| AGTAATGAGTTCCGCAATGG+TGG | - | chr5_1:2140931-2140950 | Msa0710160:intron | 45.0% | |
| GAACTTACAGAGAGGCAAGT+TGG | + | chr5_1:2140991-2141010 | None:intergenic | 45.0% | |
| TTTGTAAGCACCCACTATGC+TGG | - | chr5_1:2141170-2141189 | Msa0710160:intron | 45.0% | |
| TACGTCTTTGCCAGCATAGT+GGG | + | chr5_1:2141183-2141202 | None:intergenic | 45.0% | |
| GTAGCCATCCAATTCCAAGA+AGG | - | chr5_1:2141200-2141219 | Msa0710160:intron | 45.0% | |
| CTCTCCTTCTTGGAATTGGA+TGG | + | chr5_1:2141207-2141226 | None:intergenic | 45.0% | |
| ! | GTTAGGGTTCCACGTTGATT+AGG | + | chr5_1:2141484-2141503 | None:intergenic | 45.0% |
| AATCAACGTGGAACCCTAAC+CGG | - | chr5_1:2141484-2141503 | Msa0710160:CDS | 45.0% | |
| GGACTTGAAAATGTCCGGTT+AGG | + | chr5_1:2141501-2141520 | None:intergenic | 45.0% | |
| TTTGCCCCCCCTAATGAATA+TGG | + | chr5_1:2141609-2141628 | None:intergenic | 45.0% | |
| ATCATGGCAGAGAGAAAGCA+AGG | - | chr5_1:2141682-2141701 | Msa0710160:intron | 45.0% | |
| ! | TGGACTAGAGCAGACCAAAA+TGG | - | chr5_1:2141801-2141820 | Msa0710160:intron | 45.0% |
| GCAAACAAGTTGTATGACCC+AGG | + | chr5_1:2141852-2141871 | None:intergenic | 45.0% | |
| ! | AACTTGTTTGCATGGGTTCC+TGG | - | chr5_1:2141861-2141880 | Msa0710160:intron | 45.0% |
| CAAACAGTTGGGCCATTTCT+TGG | + | chr5_1:2142254-2142273 | None:intergenic | 45.0% | |
| CAAGAAATGGCCCAACTGTT+TGG | - | chr5_1:2142252-2142271 | Msa0710160:intron | 45.0% | |
| GGTTTAGAGACTAACTGGTC+TGG | + | chr5_1:2142368-2142387 | None:intergenic | 45.0% | |
| GGGACAGAGATAGTAGAAAC+TGG | + | chr5_1:2142432-2142451 | None:intergenic | 45.0% | |
| !! | AGCATTAGAGGCACTTGCTA+GGG | + | chr5_1:2142865-2142884 | None:intergenic | 45.0% |
| TACCTGCACTTCAGCATTAG+AGG | + | chr5_1:2142877-2142896 | None:intergenic | 45.0% | |
| GACTGACAAGCATCATAGAG+AGG | + | chr5_1:2143045-2143064 | None:intergenic | 45.0% | |
| GGATGATGTGTGATCAGGTT+TGG | - | chr5_1:2143187-2143206 | Msa0710160:intron | 45.0% | |
| TGTAGTGAAGTAGGGAGGAT+TGG | + | chr5_1:2143229-2143248 | None:intergenic | 45.0% | |
| CTCTTTGTAGTGAAGTAGGG+AGG | + | chr5_1:2143234-2143253 | None:intergenic | 45.0% | |
| ! | GAGATGATAGTGCCATACCA+AGG | - | chr5_1:2143259-2143278 | Msa0710160:intron | 45.0% |
| ATGGATTCCATGCCTTGGTA+TGG | + | chr5_1:2143274-2143293 | None:intergenic | 45.0% | |
| ATACCAAGGCATGGAATCCA+TGG | - | chr5_1:2143273-2143292 | Msa0710160:intron | 45.0% | |
| AATCCATGGATTCCATGCCT+TGG | + | chr5_1:2143279-2143298 | None:intergenic | 45.0% | |
| !! | TTGAATAAATATATTATTAT+AGG | - | chr5_1:2140286-2140305 | Msa0710160:intron | 5.0% |
| ACACACTGTCAGATGGTGCA+GGG | + | chr5_1:2138036-2138055 | None:intergenic | 50.0% | |
| CCCCAGGATTTGCCAATGTA+AGG | + | chr5_1:2139688-2139707 | None:intergenic | 50.0% | |
| ! | AATCCTGGGGGGTATGTCTT+AGG | - | chr5_1:2139698-2139717 | Msa0710160:intron | 50.0% |
| ATTCCTAAGACATACCCCCC+AGG | + | chr5_1:2139704-2139723 | None:intergenic | 50.0% | |
| TTGTCCCATGGACTCTGCAA+TGG | + | chr5_1:2140063-2140082 | None:intergenic | 50.0% | |
| CGACTGAGAAACTTGTCCCA+TGG | + | chr5_1:2140075-2140094 | None:intergenic | 50.0% | |
| ! | CGCAGATTCTGAAAAACCCG+TGG | - | chr5_1:2140888-2140907 | Msa0710160:intron | 50.0% |
| CCGAGTAATGAGTTCCGCAA+TGG | - | chr5_1:2140928-2140947 | Msa0710160:intron | 50.0% | |
| ! | GCTTAATGGGTCCACCATTG+CGG | + | chr5_1:2140945-2140964 | None:intergenic | 50.0% |
| CTACGTCTTTGCCAGCATAG+TGG | + | chr5_1:2141184-2141203 | None:intergenic | 50.0% | |
| ! | AGGGTTCCACGTTGATTAGG+TGG | + | chr5_1:2141481-2141500 | None:intergenic | 50.0% |
| ! | TACATTGGTCTAGCTTGGCC+TGG | - | chr5_1:2141650-2141669 | Msa0710160:intron | 50.0% |
| ! | ACATTGGTCTAGCTTGGCCT+GGG | - | chr5_1:2141651-2141670 | Msa0710160:intron | 50.0% |
| GCATGGGTTCCTGGCTATAT+TGG | - | chr5_1:2141870-2141889 | Msa0710160:intron | 50.0% | |
| ACAGTTGGGCCATTTCTTGG+AGG | + | chr5_1:2142251-2142270 | None:intergenic | 50.0% | |
| GGCCCAACTGTTTGGGAAAT+TGG | - | chr5_1:2142260-2142279 | Msa0710160:intron | 50.0% | |
| AATTCTCCAGCTGAGCGATC+TGG | + | chr5_1:2142290-2142309 | None:intergenic | 50.0% | |
| !! | CAGCATTAGAGGCACTTGCT+AGG | + | chr5_1:2142866-2142885 | None:intergenic | 50.0% |
| TGCCTCTAATGCTGAAGTGC+AGG | - | chr5_1:2142872-2142891 | Msa0710160:intron | 50.0% | |
| GATAGTGCCATACCAAGGCA+TGG | - | chr5_1:2143264-2143283 | Msa0710160:intron | 50.0% | |
| ! | GTGGACGGGTTCTCTTGTTG+TGG | - | chr5_1:2137338-2137357 | Msa0710160:CDS | 55.0% |
| ! | GACGGGTTCTCTTGTTGTGG+TGG | - | chr5_1:2137341-2137360 | Msa0710160:CDS | 55.0% |
| CACACTGTCAGATGGTGCAG+GGG | + | chr5_1:2138035-2138054 | None:intergenic | 55.0% | |
| CACACACTGTCAGATGGTGC+AGG | + | chr5_1:2138037-2138056 | None:intergenic | 55.0% | |
| GCGATTGCGATCATGTCCGT+TGG | + | chr5_1:2139479-2139498 | None:intergenic | 55.0% | |
| ! | CATTGGTCTAGCTTGGCCTG+GGG | - | chr5_1:2141652-2141671 | Msa0710160:intron | 55.0% |
| TGCCATGATCCTGCATCCCC+AGG | + | chr5_1:2141671-2141690 | None:intergenic | 60.0% | |
| GGCATTCCAGATCGCTCAGC+TGG | - | chr5_1:2142281-2142300 | Msa0710160:intron | 60.0% | |
| CTAGCTTGGCCTGGGGATGC+AGG | - | chr5_1:2141659-2141678 | Msa0710160:intron | 65.0% | |
| GGCCTGGGGATGCAGGATCA+TGG | - | chr5_1:2141666-2141685 | Msa0710160:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 2137328 | 2143455 | 2137328 | ID=Msa0710160;Name=Msa0710160 |
| chr5_1 | mRNA | 2137328 | 2143455 | 2137328 | ID=Msa0710160-mRNA-1;Parent=Msa0710160;Name=Msa0710160-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.13|0.06|1|1|0.93|16|0|672 |
| chr5_1 | exon | 2143358 | 2143455 | 2143358 | ID=Msa0710160-mRNA-1:exon:623;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2141462 | 2141528 | 2141462 | ID=Msa0710160-mRNA-1:exon:622;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2141003 | 2141124 | 2141003 | ID=Msa0710160-mRNA-1:exon:621;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2140840 | 2140875 | 2140840 | ID=Msa0710160-mRNA-1:exon:620;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2140595 | 2140714 | 2140595 | ID=Msa0710160-mRNA-1:exon:619;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2140356 | 2140475 | 2140356 | ID=Msa0710160-mRNA-1:exon:618;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2140108 | 2140243 | 2140108 | ID=Msa0710160-mRNA-1:exon:617;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2139781 | 2139957 | 2139781 | ID=Msa0710160-mRNA-1:exon:616;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2139461 | 2139616 | 2139461 | ID=Msa0710160-mRNA-1:exon:615;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2139256 | 2139362 | 2139256 | ID=Msa0710160-mRNA-1:exon:614;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2139080 | 2139164 | 2139080 | ID=Msa0710160-mRNA-1:exon:613;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2138853 | 2138994 | 2138853 | ID=Msa0710160-mRNA-1:exon:612;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2138411 | 2138570 | 2138411 | ID=Msa0710160-mRNA-1:exon:611;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2138094 | 2138210 | 2138094 | ID=Msa0710160-mRNA-1:exon:610;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2137890 | 2138013 | 2137890 | ID=Msa0710160-mRNA-1:exon:609;Parent=Msa0710160-mRNA-1 |
| chr5_1 | exon | 2137328 | 2137579 | 2137328 | ID=Msa0710160-mRNA-1:exon:608;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2143358 | 2143455 | 2143358 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2141462 | 2141528 | 2141462 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2141003 | 2141124 | 2141003 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2140840 | 2140875 | 2140840 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2140595 | 2140714 | 2140595 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2140356 | 2140475 | 2140356 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2140108 | 2140243 | 2140108 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2139781 | 2139957 | 2139781 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2139461 | 2139616 | 2139461 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2139256 | 2139362 | 2139256 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2139080 | 2139164 | 2139080 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2138853 | 2138994 | 2138853 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2138411 | 2138570 | 2138411 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2138094 | 2138210 | 2138094 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2137890 | 2138013 | 2137890 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| chr5_1 | CDS | 2137328 | 2137579 | 2137328 | ID=Msa0710160-mRNA-1:cds;Parent=Msa0710160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
