AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580580 MtrunA17_Chr8g0379241 94.652 991 7 1 1 945 1 991 0.0 1931
Msa0580580 MtrunA17_Chr2g0284211 81.883 988 127 8 1 945 1 979 0.0 1622
Msa0580580 MtrunA17_Chr2g0296991 63.137 1020 263 12 4 930 32 1031 0.0 1290
Msa0580580 MtrunA17_Chr4g0073711 73.374 815 208 5 118 931 220 1026 0.0 1270
Msa0580580 MtrunA17_Chr3g0088821 68.374 898 262 9 64 945 187 1078 0.0 1264
Msa0580580 MtrunA17_Chr3g0137951 67.897 894 248 11 75 945 210 1087 0.0 1255
Msa0580580 MtrunA17_Chr8g0352231 67.861 893 262 10 70 945 194 1078 0.0 1241
Msa0580580 MtrunA17_Chr8g0383701 65.252 872 279 5 75 930 220 1083 0.0 1235
Msa0580580 MtrunA17_Chr1g0201731 66.208 873 266 6 75 932 228 1086 0.0 1218
Msa0580580 MtrunA17_Chr1g0183381 65.965 855 254 9 93 941 79 902 0.0 1182
Msa0580580 MtrunA17_Chr7g0267731 62.459 911 319 10 51 945 83 986 0.0 1162
Msa0580580 MtrunA17_Chr3g0078671 59.933 891 322 10 75 945 174 1049 0.0 1104
Msa0580580 MtrunA17_Chr8g0364641 53.409 968 393 12 9 942 37 980 0.0 1093
Msa0580580 MtrunA17_Chr5g0410641 45.266 1014 440 18 12 926 110 1107 0.0 854
Msa0580580 MtrunA17_Chr4g0039801 45.587 1031 411 23 12 926 132 1128 0.0 852
Msa0580580 MtrunA17_Chr1g0165411 45.106 991 450 18 9 926 120 1089 0.0 833
Msa0580580 MtrunA17_Chr7g0269741 48.683 873 355 16 134 926 297 1156 0.0 810
Msa0580580 MtrunA17_Chr1g0165421 44.356 1010 451 20 9 926 127 1117 0.0 808
Msa0580580 MtrunA17_Chr2g0297351 47.308 873 359 16 134 926 159 1010 0.0 790
Msa0580580 MtrunA17_Chr7g0274751 43.468 842 288 21 134 926 96 798 0.0 615
Msa0580580 MtrunA17_Chr2g0322361 34.259 756 413 16 179 917 52 740 1.40e-130 411
Msa0580580 MtrunA17_Chr2g0322371 33.466 753 424 14 179 922 47 731 2.02e-128 405
Msa0580580 MtrunA17_Chr3g0102531 33.626 684 374 11 149 828 21 628 4.08e-127 401
Msa0580580 MtrunA17_Chr2g0322351 34.697 758 422 20 166 917 37 727 6.96e-124 393
Msa0580580 MtrunA17_Chr4g0046401 32.463 804 447 20 131 917 6 730 1.22e-123 392
Msa0580580 MtrunA17_Chr4g0025201 32.661 744 419 14 166 896 37 711 4.51e-121 385
Msa0580580 MtrunA17_Chr1g0186381 30.097 824 475 16 125 931 1 740 1.42e-119 382
Msa0580580 MtrunA17_Chr3g0095791 29.948 768 441 15 142 901 11 689 2.92e-110 355
Msa0580580 MtrunA17_Chr2g0298581 30.418 766 441 15 142 901 11 690 2.77e-109 353
Msa0580580 MtrunA17_Chr3g0102541 32.834 667 369 14 166 828 38 629 1.48e-108 352
Msa0580580 MtrunA17_Chr2g0307191 30.065 765 431 14 150 902 19 691 5.52e-108 349
Msa0580580 MtrunA17_Chr3g0077511 27.828 769 461 13 142 902 11 693 3.12e-99 326
Msa0580580 MtrunA17_Chr3g0102551 38.557 402 212 10 137 518 7 393 5.76e-87 294
Msa0580580 MtrunA17_Chr3g0102551 30.263 304 201 5 620 914 428 729 2.79e-35 144
Msa0580580 MtrunA17_Chr2g0322341 42.006 319 171 6 166 484 39 343 3.45e-79 261
Msa0580580 MtrunA17_Chr3g0126641 45.540 213 90 4 460 654 6 210 2.74e-47 167
Msa0580580 MtrunA17_Chr2g0322331 31.267 371 234 10 561 917 8 371 8.03e-47 172
Msa0580580 MtrunA17_Chr0c03g0490021 63.934 122 43 1 774 894 1 122 2.06e-43 154
Msa0580580 MtrunA17_Chr2g0307241 34.694 196 108 4 150 345 19 194 2.11e-30 119
Msa0580580 MtrunA17_Chr7g0252781 68.116 69 22 0 861 929 6 74 2.14e-29 112
Msa0580580 MtrunA17_Chr8g0355061 74.074 54 14 0 774 827 1 54 1.12e-22 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580580 AT4G18780.1 75.859 990 189 7 1 945 1 985 0.0 1539
Msa0580580 AT5G44030.1 63.153 1034 283 14 6 945 20 1049 0.0 1309
Msa0580580 AT5G44030.2 61.618 1063 281 16 6 945 20 1078 0.0 1288
Msa0580580 AT5G17420.1 69.161 882 229 7 71 945 181 1026 0.0 1274
Msa0580580 AT5G05170.1 68.989 890 245 9 75 945 188 1065 0.0 1269
Msa0580580 AT4G32410.1 68.836 876 237 10 75 929 206 1066 0.0 1261
Msa0580580 AT2G25540.1 66.475 871 264 8 76 929 187 1046 0.0 1228
Msa0580580 AT2G21770.1 65.276 887 280 9 75 945 212 1086 0.0 1226
Msa0580580 AT5G09870.1 63.508 918 300 9 42 945 172 1068 0.0 1226
Msa0580580 AT5G64740.1 65.242 889 273 10 75 945 213 1083 0.0 1226
Msa0580580 AT4G39350.1 65.576 886 280 6 60 930 195 1070 0.0 1214
Msa0580580 AT5G44030.3 72.574 773 165 8 216 945 2 770 0.0 1161
Msa0580580 AT3G03050.1 44.098 1025 435 21 12 926 135 1131 0.0 837
Msa0580580 AT5G16910.1 44.216 1020 443 20 12 926 133 1131 0.0 829
Msa0580580 AT4G38190.1 43.663 1010 437 21 12 926 120 1092 0.0 816
Msa0580580 AT1G02730.1 46.674 962 404 17 57 932 236 1174 0.0 814
Msa0580580 AT2G33100.2 48.123 879 349 18 134 926 167 1024 0.0 800
Msa0580580 AT2G33100.1 48.123 879 349 18 134 926 167 1024 0.0 800
Msa0580580 AT1G32180.1 49.482 869 342 18 138 924 113 966 0.0 799
Msa0580580 AT1G32180.2 49.482 869 342 18 138 924 113 966 0.0 799
Msa0580580 AT2G32530.1 32.412 796 430 18 154 917 24 743 1.48e-119 382
Msa0580580 AT2G32610.1 32.000 800 445 21 155 922 25 757 4.36e-117 376
Msa0580580 AT2G32540.1 31.877 778 423 18 178 922 50 753 5.16e-117 375
Msa0580580 AT2G32620.1 33.597 759 388 22 178 898 50 730 9.89e-115 370
Msa0580580 AT4G15320.5 34.653 707 382 19 136 831 6 643 6.91e-114 367
Msa0580580 AT4G15320.3 34.653 707 382 19 136 831 6 643 1.01e-113 367
Msa0580580 AT4G15320.4 33.934 722 382 20 136 831 6 658 1.28e-109 357
Msa0580580 AT2G32620.3 35.458 612 317 15 178 781 50 591 1.85e-108 348
Msa0580580 AT4G15290.1 34.299 656 364 14 178 829 50 642 1.96e-108 353
Msa0580580 AT4G15320.2 33.688 751 362 22 136 831 6 675 2.70e-105 345
Msa0580580 AT2G32620.4 33.475 705 359 21 232 898 2 634 5.79e-104 338
Msa0580580 AT2G32620.2 36.553 528 265 12 178 697 50 515 3.36e-99 322
Msa0580580 AT4G15320.1 32.030 793 362 24 136 831 6 718 8.76e-97 323
Msa0580580 AT1G55850.1 41.253 383 197 9 145 518 28 391 1.29e-83 285
Msa0580580 AT1G55850.1 30.154 325 204 5 602 914 406 719 8.48e-34 140
Msa0580580 AT4G24010.1 38.609 417 224 10 122 528 1 395 5.70e-80 276
Msa0580580 AT4G24010.1 31.164 292 189 4 615 900 419 704 2.49e-37 151
Msa0580580 AT4G23990.1 37.379 412 231 9 122 525 20 412 9.36e-77 267
Msa0580580 AT4G23990.1 32.646 291 182 5 615 898 438 721 1.88e-38 154
Msa0580580 AT4G24000.1 38.677 393 206 11 145 528 19 385 8.09e-76 263
Msa0580580 AT4G24000.1 29.747 316 208 6 611 918 405 714 1.59e-37 151
Msa0580580 AT4G24000.2 43.781 201 97 6 334 528 3 193 9.09e-41 158
Msa0580580 AT4G24000.2 32.090 268 169 4 611 872 213 473 6.12e-38 150
Msa0580580 AT4G23990.2 34.470 264 160 4 615 872 224 480 1.24e-38 152
Msa0580580 AT4G23990.2 41.709 199 106 5 334 525 3 198 2.44e-38 151

Find 249 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGATTGGTTGGATTTA+TGG 0.109971 4_1:-85742565 Msa0580580:intron
TTTCATTGAATCTGCATTAA+TGG 0.149187 4_1:-85742875 Msa0580580:CDS
AAGGTTGCACTTTGTCTTTC+AGG 0.150719 4_1:+85744567 None:intergenic
TTCAATCGGCAAGCACTTTA+TGG 0.171012 4_1:-85743204 Msa0580580:CDS
CGATTAACTGGAGACCATTT+AGG 0.191270 4_1:+85745100 None:intergenic
TAGATTGTTAAGTCACTTAA+AGG 0.195478 4_1:-85741392 Msa0580580:exon
GTTGCAAGTATTCTCTTTCT+TGG 0.205382 4_1:-85741960 Msa0580580:CDS
CAATGGTAGGAGTGCGGTTT+TGG 0.244680 4_1:+85741526 None:intergenic
GTGTTTGTATTGAAGATTTA+TGG 0.255016 4_1:-85741887 Msa0580580:CDS
GTTACTGAGGATATCTTAAC+AGG 0.273691 4_1:-85742538 Msa0580580:CDS
GGGTTTCTAGAGATGGAAAA+AGG 0.279513 4_1:-85743107 Msa0580580:CDS
TGGCTATAGCCCACCTTCTA+TGG 0.289114 4_1:-85743184 Msa0580580:CDS
TGCATAGTCCATCCTTCTTC+TGG 0.289277 4_1:+85744324 None:intergenic
GGTCAATACCATCAAATCTT+TGG 0.293893 4_1:+85743634 None:intergenic
TATGGCGTAATGAGCAGTTT+TGG 0.294515 4_1:-85741869 Msa0580580:CDS
TTTCCAATCTTAGTTCAATA+TGG 0.296677 4_1:+85741249 None:intergenic
AGAAACCCGTGACACTTCTT+TGG 0.298881 4_1:+85743122 None:intergenic
CAAACATCTCTACCAACTTC+TGG 0.301445 4_1:+85743672 None:intergenic
GAAGAAGTAAATGAAGAATC+TGG 0.308024 4_1:-85746164 Msa0580580:CDS
GTCAATACCATCAAATCTTT+GGG 0.311088 4_1:+85743635 None:intergenic
CATCTATTATATGTGAGATT+TGG 0.311939 4_1:-85745153 Msa0580580:CDS
AAGAATCTGGGAATTCAAAA+TGG 0.314902 4_1:-85746151 Msa0580580:CDS
CTGTCAACTTTGTTCACAAA+TGG 0.316754 4_1:+85741444 None:intergenic
ACTAGAGGAAGGGATGTAAA+AGG 0.323968 4_1:+85742286 None:intergenic
AGTCTTGGGGACCTCTCTTT+GGG 0.325803 4_1:-85741614 Msa0580580:CDS
GAGTCTTGGGGACCTCTCTT+TGG 0.328522 4_1:-85741615 Msa0580580:CDS
CCCTTTGAATGCAGGCCTTA+AGG 0.329006 4_1:+85742471 None:intergenic
CCTTTGAATGCAGGCCTTAA+GGG 0.330367 4_1:+85742472 None:intergenic
ATATAAGTGTGTCGATTAAC+TGG 0.331979 4_1:+85745088 None:intergenic
CTCCCCTCTGCAACATTTGT+GGG 0.334500 4_1:-85747624 Msa0580580:CDS
AGTTCTATATGGTGCGAGTT+TGG 0.336510 4_1:+85745264 None:intergenic
TTCTTGTGGTGTTGGTATCC+TGG 0.342322 4_1:+85743909 None:intergenic
AACATGGTTGGTGTTGTTGC+TGG 0.349033 4_1:-85741666 Msa0580580:CDS
AAGGGAAAGGGAAAGGGAAG+GGG 0.357778 4_1:-85746100 Msa0580580:CDS
CGATCTACTGCATGCCCTTA+AGG 0.360513 4_1:-85742486 Msa0580580:CDS
ACAATTATCACAGTTCTATA+TGG 0.361173 4_1:+85745253 None:intergenic
TGATCACGTGAGTTATTTCC+AGG 0.362168 4_1:+85744285 None:intergenic
TGTTGGATCAGTTCCCTAAA+TGG 0.367400 4_1:-85745114 Msa0580580:CDS
TGATCACCCTGGAATGATTC+AGG 0.367961 4_1:-85744268 Msa0580580:intron
GATTAACTGGAGACCATTTA+GGG 0.372794 4_1:+85745101 None:intergenic
ATGCTGCAATTTATAATCTC+AGG 0.377395 4_1:-85743074 Msa0580580:CDS
ATTGATTTCATGTTCAAAAC+AGG 0.379355 4_1:+85747528 None:intergenic
ATTTCTTCCATCTGCTGCTC+TGG 0.381302 4_1:+85746014 None:intergenic
CCTGTGAGAAGGCAAATTGC+TGG 0.381858 4_1:+85742247 None:intergenic
CAGGATTTGTAACTCGATAA+TGG 0.386096 4_1:+85745203 None:intergenic
TCCATTCCTCAAGGGTCTCA+TGG 0.386149 4_1:-85741553 Msa0580580:CDS
AATTGTGCGGCTAGTAATCT+TGG 0.388047 4_1:-85745236 Msa0580580:CDS
AACTAGTGCTTAGTGAGAAT+GGG 0.389827 4_1:-85747597 Msa0580580:CDS
CACCTGCTTTCTTGTGGTGT+TGG 0.395262 4_1:+85743901 None:intergenic
GCTGCTGAGGATACCGAGTT+TGG 0.398636 4_1:-85741750 Msa0580580:CDS
CATCTGTTTGCTGTGTTCCA+AGG 0.401270 4_1:-85741825 Msa0580580:CDS
TAACCATATTGAACTAAGAT+TGG 0.404025 4_1:-85741252 Msa0580580:three_prime_UTR
GCTCCCCTCTGCAACATTTG+TGG 0.406786 4_1:-85747625 Msa0580580:CDS
CAACTAGTGCTTAGTGAGAA+TGG 0.407149 4_1:-85747598 Msa0580580:CDS
CCCCTTTGGTATGCAGTTGG+AGG 0.409491 4_1:-85742361 Msa0580580:CDS
AAAGGGAAAGGGAAAGGGAA+GGG 0.410774 4_1:-85746101 Msa0580580:CDS
CAACCATGTTAATAATGATA+AGG 0.411803 4_1:+85741679 None:intergenic
TAATGGAGGATATGAGTCTT+GGG 0.417584 4_1:-85741628 Msa0580580:CDS
CAAAACAGGCCTTACACATT+GGG 0.420161 4_1:+85747542 None:intergenic
GCCTCCTTGATCAGCATTGA+AGG 0.422972 4_1:+85742820 None:intergenic
TCTCAAATGGCTGCAGAGAT+TGG 0.423335 4_1:-85742332 Msa0580580:CDS
ATTGGTGAATTGACCATAGA+AGG 0.424684 4_1:+85743171 None:intergenic
AGAGGACTTGATGGCATTCA+AGG 0.425631 4_1:-85743255 Msa0580580:CDS
GAAAGAGAGGGCGAACCCTC+TGG 0.427333 4_1:-85744857 Msa0580580:CDS
ATTGAAGGATCTGCAGATTC+TGG 0.429155 4_1:+85742835 None:intergenic
AACCATGTTAATAATGATAA+GGG 0.430068 4_1:+85741680 None:intergenic
AAGGGAAAGGGAAAGGGAAA+GGG 0.432069 4_1:-85746106 Msa0580580:CDS
TCTTCCATCTGCTGCTCTGG+TGG 0.433052 4_1:+85746017 None:intergenic
CTCGGTATCCTCAGCAGCCT+TGG 0.439112 4_1:+85741755 None:intergenic
TAACAAGATACTTTATCTAC+TGG 0.444449 4_1:+85744734 None:intergenic
ACAGTGTCCTCACTTGATAT+TGG 0.444910 4_1:-85746272 Msa0580580:intron
AGAGGAAAAGCACTTTCAAC+AGG 0.451203 4_1:+85745184 None:intergenic
GGACATACCTGAATCATTCC+AGG 0.451491 4_1:+85744261 None:intergenic
CTACGTTCCTTCACAAAAGA+AGG 0.451548 4_1:+85744548 None:intergenic
AGCAGCAGATGGAAGAAATT+CGG 0.452907 4_1:-85746010 Msa0580580:intron
CCAAGGATTTCTTAAGATGT+TGG 0.457240 4_1:-85741808 Msa0580580:CDS
CCATTCCTCAAGGGTCTCAT+GGG 0.459326 4_1:-85741552 Msa0580580:CDS
TCCTCCAACTGCATACCAAA+GGG 0.461636 4_1:+85742360 None:intergenic
GTAAACATGAGAGGACTTGA+TGG 0.461865 4_1:-85743264 Msa0580580:CDS
TGAAATCAATGAAGGACATA+AGG 0.462990 4_1:-85747515 Msa0580580:intron
CTTTGGTATGCAGTTGGAGG+AGG 0.465263 4_1:-85742358 Msa0580580:CDS
GCTGGAAAGGGAAAGGGAAA+GGG 0.465899 4_1:-85746112 Msa0580580:CDS
CCCTTAAGGCCTGCATTCAA+AGG 0.466918 4_1:-85742472 Msa0580580:CDS
TTAATAATGATAAGGGTTGT+TGG 0.470001 4_1:+85741687 None:intergenic
TGTCAACTTTGTTCACAAAT+GGG 0.473649 4_1:+85741445 None:intergenic
AAAGGGAAAGGGAAAGGGAA+AGG 0.475778 4_1:-85746107 Msa0580580:CDS
GGCTGGAAAGGGAAAGGGAA+AGG 0.476917 4_1:-85746113 Msa0580580:CDS
TTGGGGACCTCTCTTTGGGA+AGG 0.478690 4_1:-85741610 Msa0580580:CDS
TTGGAGGAGGCCGTCTCAAA+TGG 0.478911 4_1:-85742345 Msa0580580:CDS
GGATTTCTTAAGATGTTGGC+TGG 0.479449 4_1:-85741804 Msa0580580:CDS
ATCAATGGTGGTTCTTTCAA+AGG 0.479467 4_1:+85744797 None:intergenic
AACCCGTGACACTTCTTTGG+TGG 0.482334 4_1:+85743125 None:intergenic
TCGAAGGAAATGAACTTCCT+AGG 0.482726 4_1:-85743959 Msa0580580:CDS
ACAATCAAGATTGAGAATGA+AGG 0.483166 4_1:+85743752 None:intergenic
TCATCTCTATCCATTCCTCA+AGG 0.483620 4_1:-85741562 Msa0580580:CDS
AAGTAATACTCAGGTGCTCT+TGG 0.485467 4_1:+85744608 None:intergenic
AAGAAGTAAATGAAGAATCT+GGG 0.485824 4_1:-85746163 Msa0580580:CDS
TTTGAACATGAAATCAATGA+AGG 0.485921 4_1:-85747523 Msa0580580:CDS
CCAACATCTTAAGAAATCCT+TGG 0.488128 4_1:+85741808 None:intergenic
TGAGAATGGGGAAATGTTTG+TGG 0.488208 4_1:-85747584 Msa0580580:CDS
CAAGTCCTTCGATGGGCACT+TGG 0.493315 4_1:-85742415 Msa0580580:CDS
CCGTGACACTTCTTTGGTGG+AGG 0.495706 4_1:+85743128 None:intergenic
TTAATGGAGGATATGAGTCT+TGG 0.495754 4_1:-85741629 Msa0580580:CDS
CTTGGCAGTGACAGTGAAGT+TGG 0.496366 4_1:+85741773 None:intergenic
CTTATCATTATTAACATGGT+TGG 0.497755 4_1:-85741678 Msa0580580:CDS
GAAGACTGAATGGGGAAAAG+AGG 0.497940 4_1:-85742767 Msa0580580:intron
AGATCCTTCAATGCTGATCA+AGG 0.498517 4_1:-85742824 Msa0580580:CDS
AATAGAATGAAAGGCTGGAA+AGG 0.501075 4_1:-85746125 Msa0580580:CDS
CATCTCTATCCATTCCTCAA+GGG 0.506755 4_1:-85741561 Msa0580580:CDS
GCTCACATTTGAATCTCTTG+TGG 0.509445 4_1:-85744687 Msa0580580:CDS
CCAGCAATTTGCCTTCTCAC+AGG 0.510485 4_1:-85742247 Msa0580580:CDS
GTATGAAGAGAAGACTGAAT+GGG 0.511979 4_1:-85742776 Msa0580580:CDS
TACAATAAGCAACTAGAGGA+AGG 0.512008 4_1:+85742275 None:intergenic
ATAGAATGAAAGGCTGGAAA+GGG 0.512044 4_1:-85746124 Msa0580580:CDS
GAACCAAATATGATGCCTTC+CGG 0.513538 4_1:-85747649 None:intergenic
GAAAGGGAAAGGGAAAGGGA+AGG 0.513861 4_1:-85746102 Msa0580580:CDS
CTAGAAACATAAACTAGCCT+AGG 0.516473 4_1:+85743942 None:intergenic
CAAGTGTGCTTGAGCTGCGT+TGG 0.518971 4_1:-85741914 Msa0580580:CDS
CAAGATGGAACACCTTGGCC+TGG 0.519011 4_1:-85744303 Msa0580580:CDS
ATTGTGCGGCTAGTAATCTT+GGG 0.520101 4_1:-85745235 Msa0580580:CDS
GACTAAGAAGGATGCACCTA+CGG 0.521394 4_1:-85746060 Msa0580580:CDS
GTGTAGTTACCCAATGTGTA+AGG 0.522831 4_1:-85747551 Msa0580580:CDS
CCCATGAGACCCTTGAGGAA+TGG 0.524531 4_1:+85741552 None:intergenic
CCCACAGCTAATTACATGAA+TGG 0.524985 4_1:+85742798 None:intergenic
CAAGTGCCCATCGAAGGACT+TGG 0.527403 4_1:+85742416 None:intergenic
TGAAAGGCTGGAAAGGGAAA+GGG 0.529591 4_1:-85746118 Msa0580580:CDS
GAATCTGCATTAATGGAGAA+TGG 0.529951 4_1:-85742868 Msa0580580:CDS
TTTCAGCACCTGCTTTCTTG+TGG 0.530437 4_1:+85743895 None:intergenic
TCAAGATGCAGTGCCGAGGA+TGG 0.530653 4_1:-85742513 Msa0580580:CDS
TCTTGTTATGTGTCAGATGA+TGG 0.530704 4_1:-85744719 Msa0580580:CDS
TGCACCTACGGCTGAAAATG+AGG 0.530832 4_1:-85746048 Msa0580580:CDS
ATGAAAGGCTGGAAAGGGAA+AGG 0.532370 4_1:-85746119 Msa0580580:CDS
CATTCAAGGACCAATGTATG+TGG 0.535770 4_1:-85743241 Msa0580580:CDS
GGTGCTGACCCTTTGAATGC+AGG 0.536470 4_1:+85742463 None:intergenic
GAAGGAACGTAGAGCAATGA+AGG 0.539415 4_1:-85744537 Msa0580580:intron
CACCTATCAACTTGTCTGAT+CGG 0.540320 4_1:-85742444 Msa0580580:CDS
CTCCTCCAACTGCATACCAA+AGG 0.542293 4_1:+85742359 None:intergenic
GTGTCACGGGTTTCTAGAGA+TGG 0.544263 4_1:-85743114 Msa0580580:CDS
AATATAAAGTTCACCAAACT+CGG 0.545632 4_1:+85741737 None:intergenic
GCATTAATGGAGAATGGAGG+AGG 0.546724 4_1:-85742862 Msa0580580:CDS
GCCATTCATGTAATTAGCTG+TGG 0.547211 4_1:-85742799 Msa0580580:CDS
CAGCTGAATTTGCAAAGAAG+TGG 0.548104 4_1:-85744661 Msa0580580:CDS
AAAGAAAACTGTATTGCGGT+TGG 0.548349 4_1:+85743596 None:intergenic
TCAAAACAGGCCTTACACAT+TGG 0.548986 4_1:+85747541 None:intergenic
GGTTGCACCAAGTCCTTCGA+TGG 0.550785 4_1:-85742423 Msa0580580:CDS
ACTGTATTAGCTGTAATCAA+TGG 0.551245 4_1:+85744782 None:intergenic
TACAGTGCTTTCTATCCTTG+CGG 0.551652 4_1:-85744765 Msa0580580:CDS
CAATCAAGATTGAGAATGAA+GGG 0.553115 4_1:+85743753 None:intergenic
TGCTGCAATTTATAATCTCA+GGG 0.555560 4_1:-85743073 Msa0580580:CDS
AGCTGAATTTGCAAAGAAGT+GGG 0.555678 4_1:-85744660 Msa0580580:CDS
AGTTAATGCTATGGTAGCTA+AGG 0.557655 4_1:-85744358 Msa0580580:CDS
TTTCTCATGGATCCAGAAGT+TGG 0.558472 4_1:-85743684 Msa0580580:CDS
CGTGAGTTATTTCCAGGCCA+AGG 0.560065 4_1:+85744291 None:intergenic
CCTTAAGGCCTGCATTCAAA+GGG 0.561090 4_1:-85742471 Msa0580580:CDS
CTAGAGGAAGGGATGTAAAA+GGG 0.561370 4_1:+85742287 None:intergenic
TACCAACACCACAAGAAAGC+AGG 0.561373 4_1:-85743903 Msa0580580:CDS
AATGTTGCAGAGGGGAGCAC+CGG 0.561788 4_1:+85747630 None:intergenic
CCATGACAGGTTTGAAAGAG+AGG 0.562200 4_1:-85744870 Msa0580580:intron
TTCCCCACAAATGTTGCAGA+GGG 0.563779 4_1:+85747621 None:intergenic
AACCCTTATCATTATTAACA+TGG 0.564229 4_1:-85741682 Msa0580580:CDS
CTCCTACCATTGTTATTCTG+TGG 0.564955 4_1:-85741515 Msa0580580:CDS
AAAGAGAATACTTGCAACGT+TGG 0.565010 4_1:+85741965 None:intergenic
GCTCAGAAAACACCAGAAGA+AGG 0.565164 4_1:-85744336 Msa0580580:CDS
ATAATGATAAGGGTTGTTGG+TGG 0.566000 4_1:+85741690 None:intergenic
GGTATGAAGAGAAGACTGAA+TGG 0.571053 4_1:-85742777 Msa0580580:CDS
CGTGACACTTCTTTGGTGGA+GGG 0.572817 4_1:+85743129 None:intergenic
ATATCCTCCATTAAGTGCAT+CGG 0.573078 4_1:+85741638 None:intergenic
TGGCAGAGCAGCAGCCTCTG+TGG 0.573569 4_1:+85745315 None:intergenic
GTGAACTTTATATTATCAAG+TGG 0.573958 4_1:-85741728 Msa0580580:CDS
TGTCACTGCCAAGGCTGCTG+AGG 0.574457 4_1:-85741763 Msa0580580:CDS
GTTTCTAGAGAGAAAAGACC+AGG 0.576317 4_1:-85743927 Msa0580580:CDS
CAACCAGTCCCCACATACAT+TGG 0.577774 4_1:+85743231 None:intergenic
CTCCACCAAAGAAGTGTCAC+GGG 0.580069 4_1:-85743127 Msa0580580:CDS
ATCAACAGAAGCAAGTCCAG+AGG 0.582053 4_1:+85744841 None:intergenic
AGAAAACACCAGAAGAAGGA+TGG 0.582354 4_1:-85744332 Msa0580580:CDS
AGCAGGTGCTGAAAACGCAC+TGG 0.582622 4_1:-85743886 Msa0580580:intron
CAGCAACAGCATGAAGACAT+TGG 0.585064 4_1:+85743153 None:intergenic
CTGATCCAAGTGCCCATCGA+AGG 0.585278 4_1:+85742410 None:intergenic
AACCGATCAGACAAGTTGAT+AGG 0.587506 4_1:+85742442 None:intergenic
TCCCCTCTGCAACATTTGTG+GGG 0.589578 4_1:-85747623 Msa0580580:CDS
TTGCAGAGGGGAGCACCGGA+AGG 0.590831 4_1:+85747634 None:intergenic
GAAGGATGGACTATGCAAGA+TGG 0.593920 4_1:-85744318 Msa0580580:CDS
CCTCCACCAAAGAAGTGTCA+CGG 0.597661 4_1:-85743128 Msa0580580:CDS
CACGAGCACCACTGTGTCCG+AGG 0.598658 4_1:+85743985 None:intergenic
ATTGGCATAAGTACTGAAAG+TGG 0.599258 4_1:+85745295 None:intergenic
AGTAGATCGACCTCCATCCT+CGG 0.599543 4_1:+85742500 None:intergenic
CAACTTCACTGTCACTGCCA+AGG 0.599896 4_1:-85741772 Msa0580580:CDS
ATTCAAGGACCAATGTATGT+GGG 0.601446 4_1:-85743240 Msa0580580:CDS
CAGATTATGATGAGAATGAG+AGG 0.602852 4_1:-85742951 Msa0580580:CDS
GATTTATGGTTCAGTTACTG+AGG 0.604398 4_1:-85742551 Msa0580580:CDS
TAAAGTACGAGTTAATGCTA+TGG 0.607511 4_1:-85744367 Msa0580580:CDS
ACAATAAGCAACTAGAGGAA+GGG 0.607693 4_1:+85742276 None:intergenic
GCTATGACTCACACAAGCAA+TGG 0.608359 4_1:+85741305 None:intergenic
GTGCTTGAGCTGCGTTGGAG+TGG 0.608668 4_1:-85741909 Msa0580580:CDS
AGGAAAATTTATCATACCAA+CGG 0.611786 4_1:-85742227 Msa0580580:intron
CTCCAACTGCATACCAAAGG+GGG 0.614445 4_1:+85742362 None:intergenic
ACTAGTGCTTAGTGAGAATG+GGG 0.616638 4_1:-85747596 Msa0580580:CDS
CATTAATGGAGAATGGAGGA+GGG 0.618802 4_1:-85742861 Msa0580580:CDS
CATGACAGGTTTGAAAGAGA+GGG 0.620048 4_1:-85744869 Msa0580580:intron
AAGAAAACCTTCCCAAAGAG+AGG 0.621369 4_1:+85741603 None:intergenic
CCATTCATGTAATTAGCTGT+GGG 0.621369 4_1:-85742798 Msa0580580:CDS
GTATTAGCTGTAATCAATGG+TGG 0.622762 4_1:+85744785 None:intergenic
CATCAAAGAAAACTGTATTG+CGG 0.622876 4_1:+85743592 None:intergenic
GGACCAATGTATGTGGGGAC+TGG 0.623835 4_1:-85743234 Msa0580580:CDS
AGTTCCACCAGAGCAGCAGA+TGG 0.623979 4_1:-85746021 Msa0580580:CDS
ATCTCTGCAGCCATTTGAGA+CGG 0.626492 4_1:+85742335 None:intergenic
GTGACACTTCTTTGGTGGAG+GGG 0.626766 4_1:+85743130 None:intergenic
TCAACAGAAGCAAGTCCAGA+GGG 0.627318 4_1:+85744842 None:intergenic
AGATGCAGTGCCGAGGATGG+AGG 0.627594 4_1:-85742510 Msa0580580:CDS
GGTGAATTGACCATAGAAGG+TGG 0.629763 4_1:+85743174 None:intergenic
GTTCCCCACAAATGTTGCAG+AGG 0.632384 4_1:+85747620 None:intergenic
AAAGTACAATAAGCAACTAG+AGG 0.635136 4_1:+85742271 None:intergenic
GTGAATTGACCATAGAAGGT+GGG 0.638011 4_1:+85743175 None:intergenic
GACATACCTGAATCATTCCA+GGG 0.638032 4_1:+85744262 None:intergenic
TATGAAGAGAAGACTGAATG+GGG 0.639341 4_1:-85742775 Msa0580580:CDS
CACTGACCACAGAATAACAA+TGG 0.639829 4_1:+85741509 None:intergenic
GACCACAGAATAACAATGGT+AGG 0.639862 4_1:+85741513 None:intergenic
AATAACTCACGTGATCACCC+TGG 0.640021 4_1:-85744279 Msa0580580:CDS
GTTGCACCAAGTCCTTCGAT+GGG 0.642599 4_1:-85742422 Msa0580580:CDS
GGGTTCAAGATGCAGTGCCG+AGG 0.643550 4_1:-85742517 Msa0580580:CDS
TTCAAGGACCAATGTATGTG+GGG 0.644219 4_1:-85743239 Msa0580580:CDS
TGTGTGTTTACCTTGCAGAG+AGG 0.644684 4_1:+85745059 None:intergenic
GGCGCCCCATGAGACCCTTG+AGG 0.652355 4_1:+85741547 None:intergenic
ATATTGAGAACCTCTCTGCA+AGG 0.653052 4_1:-85745069 Msa0580580:intron
GGATGTAAAAGGGTAAACAA+TGG 0.653330 4_1:+85742297 None:intergenic
ACATTTCAGGTAAACATGAG+AGG 0.655980 4_1:-85743273 Msa0580580:intron
TCAATACCATCAAATCTTTG+GGG 0.660171 4_1:+85743636 None:intergenic
ATTAATGGAGAATGGAGGAG+GGG 0.661803 4_1:-85742860 Msa0580580:CDS
CTATGCAAGATGGAACACCT+TGG 0.664296 4_1:-85744308 Msa0580580:CDS
AATGGAGGATATGAGTCTTG+GGG 0.665353 4_1:-85741627 Msa0580580:CDS
TCATTTACCAATATCAAGTG+AGG 0.666673 4_1:+85746265 None:intergenic
AGTGGTGCTCGTGATATCGA+AGG 0.668614 4_1:-85743975 Msa0580580:CDS
CCAAATAATAGAAAAGACAG+AGG 0.671610 4_1:+85741479 None:intergenic
CATTCCTCAAGGGTCTCATG+GGG 0.676509 4_1:-85741551 Msa0580580:CDS
ATAGAACTGTGATAATTGTG+CGG 0.677411 4_1:-85745249 Msa0580580:CDS
CTACTGGATAGTCAACCGCA+AGG 0.684409 4_1:+85744750 None:intergenic
TCATTATGTTAACAACAGCA+AGG 0.685243 4_1:-85743727 Msa0580580:CDS
TCCTTCAATGCTGATCAAGG+AGG 0.688602 4_1:-85742821 Msa0580580:CDS
TCTGCATTAATGGAGAATGG+AGG 0.692900 4_1:-85742865 Msa0580580:CDS
CAATACCATCAAATCTTTGG+GGG 0.694121 4_1:+85743637 None:intergenic
CCTCCAACTGCATACCAAAG+GGG 0.695185 4_1:+85742361 None:intergenic
TGTGTGAGTCATAGCTCATG+AGG 0.697449 4_1:-85741297 Msa0580580:three_prime_UTR
GAATAACAATGGTAGGAGTG+CGG 0.700382 4_1:+85741520 None:intergenic
TTACTGAGGATATCTTAACA+GGG 0.703675 4_1:-85742537 Msa0580580:CDS
GGTTGGCATATCGATCACTA+CGG 0.714474 4_1:+85743613 None:intergenic
AGGGAACTGATCCAACACCC+AGG 0.730070 4_1:+85745120 None:intergenic
TCCCCACAAATGTTGCAGAG+GGG 0.730305 4_1:+85747622 None:intergenic
TCTGCTTTGCAGGTCCACAG+AGG 0.736793 4_1:-85745329 Msa0580580:intron
ATAATAGATGTCAACCACAG+AGG 0.765443 4_1:+85745166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAATGAATATAAGA+TGG + chr4_1:85741643-85741662 None:intergenic 10.0%
!!! TTTTTAATTATTTCTATGAT+CGG + chr4_1:85741781-85741800 None:intergenic 10.0%
!! TCATTTATAATTTAACTAAT+TGG - chr4_1:85744378-85744397 Msa0580580:CDS 10.0%
!! TAATTAAAAGACTATAAAAT+GGG + chr4_1:85745573-85745592 None:intergenic 10.0%
!! ATAATTAAAAGACTATAAAA+TGG + chr4_1:85745574-85745593 None:intergenic 10.0%
!! TTTGTGTTTATTTATATATG+TGG - chr4_1:85741453-85741472 Msa0580580:CDS 15.0%
!! TTGTGTTTATTTATATATGT+GGG - chr4_1:85741454-85741473 Msa0580580:CDS 15.0%
!!! TTTTTGACAAATTTTCATAT+TGG + chr4_1:85741602-85741621 None:intergenic 15.0%
!!! TTAAACATGCATTTTTTTTT+GGG - chr4_1:85741689-85741708 Msa0580580:CDS 15.0%
!!! TTTTAATTATTTCTATGATC+GGG + chr4_1:85741780-85741799 None:intergenic 15.0%
!! AATAAACAACATATATTGAA+AGG + chr4_1:85742507-85742526 None:intergenic 15.0%
!!! AAATAGTAAAAGTTCATTTT+TGG + chr4_1:85743291-85743310 None:intergenic 15.0%
!!! ACACAAAGTTTTAAAATATT+TGG - chr4_1:85743828-85743847 Msa0580580:intron 15.0%
!! AATTAAAAGACTATAAAATG+GGG + chr4_1:85745572-85745591 None:intergenic 15.0%
!!! CAAACTAAATTATATTTTAC+AGG + chr4_1:85746763-85746782 None:intergenic 15.0%
!! AATATAATGTACACAACAAA+AGG + chr4_1:85741414-85741433 None:intergenic 20.0%
!! ATAACATGTAGATTGAAATT+AGG + chr4_1:85741500-85741519 None:intergenic 20.0%
!! TAATTTCAATCTACATGTTA+TGG - chr4_1:85741499-85741518 Msa0580580:CDS 20.0%
!! AAAAAAATGCATGTTTAACA+AGG + chr4_1:85741687-85741706 None:intergenic 20.0%
!!! GTTAAACATGCATTTTTTTT+TGG - chr4_1:85741688-85741707 Msa0580580:CDS 20.0%
!!! TAAACATGCATTTTTTTTTG+GGG - chr4_1:85741690-85741709 Msa0580580:CDS 20.0%
!! CTCAAAATTCCTATAATTTA+CGG + chr4_1:85742213-85742232 None:intergenic 20.0%
!! AAATGGAAAAATAGAATGAA+AGG - chr4_1:85742735-85742754 Msa0580580:intron 20.0%
!!! ATTGAAAACTTTTTGCAAAA+CGG + chr4_1:85744237-85744256 None:intergenic 20.0%
!! AATGTATAAATTACTTTGAG+TGG - chr4_1:85744690-85744709 Msa0580580:CDS 20.0%
!! TATCAAAGATTAAAATCAGA+TGG - chr4_1:85744718-85744737 Msa0580580:CDS 20.0%
!! TTTCAAAAAAAATATCTTCC+AGG - chr4_1:85744857-85744876 Msa0580580:CDS 20.0%
!!! TTTTCTTTGATGTAAGTTTA+TGG - chr4_1:85745288-85745307 Msa0580580:CDS 20.0%
!! CATACAAAATGTAATAGAAT+TGG + chr4_1:85745429-85745448 None:intergenic 20.0%
!!! CTTTTAATTATACACATTTC+AGG - chr4_1:85745583-85745602 Msa0580580:intron 20.0%
!! ATATCATTACAAAAGAGAAA+AGG + chr4_1:85746181-85746200 None:intergenic 20.0%
!!! ATCTCCTAATCTTTATTTTT+TGG - chr4_1:85746667-85746686 Msa0580580:intron 20.0%
!! TAGACCAAAAAATAAAGATT+AGG + chr4_1:85746674-85746693 None:intergenic 20.0%
!! ACAATTATTAGATAATCCAT+GGG + chr4_1:85746740-85746759 None:intergenic 20.0%
!! AACCATGTTAATAATGATAA+GGG + chr4_1:85747192-85747211 None:intergenic 20.0%
!! TATATATTTCCAAAAACTCT+TGG + chr4_1:85747510-85747529 None:intergenic 20.0%
!! ATTGATTTCATGTTCAAAAC+AGG + chr4_1:85741344-85741363 None:intergenic 25.0%
! TTTGAACATGAAATCAATGA+AGG - chr4_1:85741346-85741365 Msa0580580:three_prime_UTR 25.0%
!!! CAAGGAATTTTTCTTATTTG+TGG + chr4_1:85741669-85741688 None:intergenic 25.0%
!!! AAACATGCATTTTTTTTTGG+GGG - chr4_1:85741691-85741710 Msa0580580:CDS 25.0%
!!! TTGTGTTGATTATCACAATT+GGG + chr4_1:85741888-85741907 None:intergenic 25.0%
! AAAGAACTGTATATTTGTGT+AGG - chr4_1:85742073-85742092 Msa0580580:intron 25.0%
! AAGAACTGTATATTTGTGTA+GGG - chr4_1:85742074-85742093 Msa0580580:intron 25.0%
! AATGTGTTACCGTAAATTAT+AGG - chr4_1:85742201-85742220 Msa0580580:intron 25.0%
!! GAAATGAGAAATCTGAAATT+AGG - chr4_1:85742234-85742253 Msa0580580:CDS 25.0%
!! ATTGTTTTCATAAGCTATCT+TGG - chr4_1:85742383-85742402 Msa0580580:CDS 25.0%
! AATCTTTGATCGTAACAATA+TGG - chr4_1:85742671-85742690 Msa0580580:intron 25.0%
! AAGAAGTAAATGAAGAATCT+GGG - chr4_1:85742706-85742725 Msa0580580:intron 25.0%
! AGCTTATAAGTATGTAAGAA+TGG + chr4_1:85743133-85743152 None:intergenic 25.0%
! ATTCTTACATACTTATAAGC+TGG - chr4_1:85743132-85743151 Msa0580580:CDS 25.0%
! TTTGTGAAAAAGAAAATCTC+TGG + chr4_1:85743207-85743226 None:intergenic 25.0%
!!! TGAAATTGTTTTAAACCATC+AGG - chr4_1:85743410-85743429 Msa0580580:intron 25.0%
! ACAATTATCACAGTTCTATA+TGG + chr4_1:85743619-85743638 None:intergenic 25.0%
! CATCTATTATATGTGAGATT+TGG - chr4_1:85743716-85743735 Msa0580580:CDS 25.0%
! ATATATTGTAGAATGAGTGA+AGG - chr4_1:85743889-85743908 Msa0580580:CDS 25.0%
! TAACAAGATACTTTATCTAC+TGG + chr4_1:85744138-85744157 None:intergenic 25.0%
! AACTAATAACTACTTCAGTT+TGG + chr4_1:85744408-85744427 None:intergenic 25.0%
! TTGATTGCATACAGAAATAA+TGG + chr4_1:85744632-85744651 None:intergenic 25.0%
! CCTTATATGAAACATTATTG+AGG + chr4_1:85745021-85745040 None:intergenic 25.0%
! CCTCAATAATGTTTCATATA+AGG - chr4_1:85745018-85745037 Msa0580580:intron 25.0%
! TATAATGCTTGATGTTTGTA+TGG - chr4_1:85745053-85745072 Msa0580580:intron 25.0%
!!! ATGAGCTTTGAAAAAACTTT+TGG - chr4_1:85745959-85745978 Msa0580580:intron 25.0%
! TTTCATTGAATCTGCATTAA+TGG - chr4_1:85745994-85746013 Msa0580580:intron 25.0%
! AGGAAACGATAATTTAAAGA+TGG + chr4_1:85746161-85746180 None:intergenic 25.0%
! ATCTGAAAAGACAAGAAAAT+AGG + chr4_1:85746292-85746311 None:intergenic 25.0%
!! ATTTTCTTGTCTTTTCAGAT+TGG - chr4_1:85746292-85746311 Msa0580580:CDS 25.0%
! AGGAAAATTTATCATACCAA+CGG - chr4_1:85746642-85746661 Msa0580580:intron 25.0%
! CAATTATTAGATAATCCATG+GGG + chr4_1:85746739-85746758 None:intergenic 25.0%
! GACAATTATTAGATAATCCA+TGG + chr4_1:85746741-85746760 None:intergenic 25.0%
! CAACCAAGAAAATCATTTAT+AGG - chr4_1:85746797-85746816 Msa0580580:intron 25.0%
!! AAGCCTATAAATGATTTTCT+TGG + chr4_1:85746803-85746822 None:intergenic 25.0%
! GTGTTTGTATTGAAGATTTA+TGG - chr4_1:85746982-85747001 Msa0580580:intron 25.0%
! AATATAAAGTTCACCAAACT+CGG + chr4_1:85747135-85747154 None:intergenic 25.0%
! GTGAACTTTATATTATCAAG+TGG - chr4_1:85747141-85747160 Msa0580580:intron 25.0%
! TTAATAATGATAAGGGTTGT+TGG + chr4_1:85747185-85747204 None:intergenic 25.0%
! AACCCTTATCATTATTAACA+TGG - chr4_1:85747187-85747206 Msa0580580:intron 25.0%
! CAACCATGTTAATAATGATA+AGG + chr4_1:85747193-85747212 None:intergenic 25.0%
! CTTATCATTATTAACATGGT+TGG - chr4_1:85747191-85747210 Msa0580580:intron 25.0%
!! CTCTGTCTTTTCTATTATTT+GGG - chr4_1:85747391-85747410 Msa0580580:intron 25.0%
! TAGATTGTTAAGTCACTTAA+AGG - chr4_1:85747477-85747496 Msa0580580:intron 25.0%
! TATGTAAAAAGATGCATACA+TGG - chr4_1:85747528-85747547 Msa0580580:CDS 25.0%
! TAACCATATTGAACTAAGAT+TGG - chr4_1:85747617-85747636 Msa0580580:CDS 25.0%
! TTTCCAATCTTAGTTCAATA+TGG + chr4_1:85747623-85747642 None:intergenic 25.0%
TGAAATCAATGAAGGACATA+AGG - chr4_1:85741354-85741373 Msa0580580:three_prime_UTR 30.0%
AACAAAAGGTTACCTTCATA+GGG + chr4_1:85741400-85741419 None:intergenic 30.0%
!! AATTATTTCTATGATCGGGT+GGG + chr4_1:85741776-85741795 None:intergenic 30.0%
!! TAATTATTTCTATGATCGGG+TGG + chr4_1:85741777-85741796 None:intergenic 30.0%
!! GTTGTGTTGATTATCACAAT+TGG + chr4_1:85741889-85741908 None:intergenic 30.0%
! TTTGGATTTTGGATTTCAAC+AGG + chr4_1:85741997-85742016 None:intergenic 30.0%
! ATCTGAAATTAGGCAATGTT+TGG - chr4_1:85742244-85742263 Msa0580580:CDS 30.0%
TCATTTACCAATATCAAGTG+AGG + chr4_1:85742607-85742626 None:intergenic 30.0%
GAAGAAGTAAATGAAGAATC+TGG - chr4_1:85742705-85742724 Msa0580580:intron 30.0%
AAGAATCTGGGAATTCAAAA+TGG - chr4_1:85742718-85742737 Msa0580580:intron 30.0%
CAAAAAGAACAAGACTAAGA+AGG - chr4_1:85742797-85742816 Msa0580580:CDS 30.0%
ATGAAATAGAGTTCCTCAAA+TGG - chr4_1:85742897-85742916 Msa0580580:CDS 30.0%
AAAAGTTTCAGACCTTAATC+AGG - chr4_1:85742963-85742982 Msa0580580:intron 30.0%
TCTTAATGCTAACCTGATTA+AGG + chr4_1:85742978-85742997 None:intergenic 30.0%
ACAAATGTAATTGTCTGAAG+CGG - chr4_1:85743222-85743241 Msa0580580:CDS 30.0%
CATATTCCGAATAAAATCGA+CGG + chr4_1:85743450-85743469 None:intergenic 30.0%
ATAGAACTGTGATAATTGTG+CGG - chr4_1:85743620-85743639 Msa0580580:CDS 30.0%
!! ATATAAGTGTGTCGATTAAC+TGG + chr4_1:85743784-85743803 None:intergenic 30.0%
TTCTATATTTATGCCATGAC+AGG - chr4_1:85743986-85744005 Msa0580580:CDS 30.0%
ACTGTATTAGCTGTAATCAA+TGG + chr4_1:85744090-85744109 None:intergenic 30.0%
! TTTTGTGAGAAGTAATACTC+AGG + chr4_1:85744273-85744292 None:intergenic 30.0%
TAAAGTACGAGTTAATGCTA+TGG - chr4_1:85744502-85744521 Msa0580580:intron 30.0%
TGTTCACAAGATTGATTGAT+TGG - chr4_1:85744751-85744770 Msa0580580:CDS 30.0%
ATGTGACAATAGTTGAGTAA+TGG + chr4_1:85744779-85744798 None:intergenic 30.0%
ATGTTTGTATGGATTTATCC+AGG - chr4_1:85745064-85745083 Msa0580580:intron 30.0%
CAATCAAGATTGAGAATGAA+GGG + chr4_1:85745119-85745138 None:intergenic 30.0%
ACAATCAAGATTGAGAATGA+AGG + chr4_1:85745120-85745139 None:intergenic 30.0%
TCATTATGTTAACAACAGCA+AGG - chr4_1:85745142-85745161 Msa0580580:CDS 30.0%
TCAATACCATCAAATCTTTG+GGG + chr4_1:85745236-85745255 None:intergenic 30.0%
GTCAATACCATCAAATCTTT+GGG + chr4_1:85745237-85745256 None:intergenic 30.0%
CATCAAAGAAAACTGTATTG+CGG + chr4_1:85745280-85745299 None:intergenic 30.0%
!! CAAAGCATCATTTTCTTATG+TGG - chr4_1:85745311-85745330 Msa0580580:CDS 30.0%
AAGAAATGCTCTTAGTTTCA+AGG - chr4_1:85745364-85745383 Msa0580580:intron 30.0%
TTGCTTACGATGAGATAATT+TGG + chr4_1:85745460-85745479 None:intergenic 30.0%
ATGCTGCAATTTATAATCTC+AGG - chr4_1:85745795-85745814 Msa0580580:intron 30.0%
TGCTGCAATTTATAATCTCA+GGG - chr4_1:85745796-85745815 Msa0580580:intron 30.0%
AACAGTTAAAATTCCACTTG+AGG - chr4_1:85746219-85746238 Msa0580580:intron 30.0%
! TTTCAGATTGGTTGGATTTA+TGG - chr4_1:85746304-85746323 Msa0580580:CDS 30.0%
TTACTGAGGATATCTTAACA+GGG - chr4_1:85746332-85746351 Msa0580580:intron 30.0%
AAAGTACAATAAGCAACTAG+AGG + chr4_1:85746601-85746620 None:intergenic 30.0%
! TGATAAATTTTCCTGTGAGA+AGG + chr4_1:85746636-85746655 None:intergenic 30.0%
CCAAATAATAGAAAAGACAG+AGG + chr4_1:85747393-85747412 None:intergenic 30.0%
! CCTCTGTCTTTTCTATTATT+TGG - chr4_1:85747390-85747409 Msa0580580:intron 30.0%
TGTCAACTTTGTTCACAAAT+GGG + chr4_1:85747427-85747446 None:intergenic 30.0%
AACTAGTGCTTAGTGAGAAT+GGG - chr4_1:85741272-85741291 Msa0580580:three_prime_UTR 35.0%
CATAAGGTTTGTCTTAAGTG+TGG - chr4_1:85741370-85741389 Msa0580580:three_prime_UTR 35.0%
CAACAAAAGGTTACCTTCAT+AGG + chr4_1:85741401-85741420 None:intergenic 35.0%
TGTTCTCAACATACTTCGAA+TGG - chr4_1:85741726-85741745 Msa0580580:CDS 35.0%
GTTCTCAACATACTTCGAAT+GGG - chr4_1:85741727-85741746 Msa0580580:CDS 35.0%
TAAAAAAAAAACGCCGTTGC+CGG - chr4_1:85741803-85741822 Msa0580580:CDS 35.0%
! CAATGTACTAAGAGCATGTT+TGG + chr4_1:85742483-85742502 None:intergenic 35.0%
ATCCTACAAAATTCGAGATG+TGG + chr4_1:85742547-85742566 None:intergenic 35.0%
! ACATCTCGAATTTTGTAGGA+TGG - chr4_1:85742546-85742565 Msa0580580:CDS 35.0%
GGAAAAATAGAATGAAAGGC+TGG - chr4_1:85742739-85742758 Msa0580580:intron 35.0%
AATAGAATGAAAGGCTGGAA+AGG - chr4_1:85742744-85742763 Msa0580580:intron 35.0%
ATAGAATGAAAGGCTGGAAA+GGG - chr4_1:85742745-85742764 Msa0580580:intron 35.0%
!! GTTTGGTTTGATACATTGAG+TGG - chr4_1:85743061-85743080 Msa0580580:intron 35.0%
!!! CTGCTTTTTCATCTCTTAGT+AGG + chr4_1:85743183-85743202 None:intergenic 35.0%
ATTCTCTATACTGTGGAAGA+TGG + chr4_1:85743323-85743342 None:intergenic 35.0%
GTTTGCAATTCTCTATACTG+TGG + chr4_1:85743330-85743349 None:intergenic 35.0%
!!! GAAAGACCGTCGATTTTATT+CGG - chr4_1:85743441-85743460 Msa0580580:intron 35.0%
!! ATTGGCATAAGTACTGAAAG+TGG + chr4_1:85743577-85743596 None:intergenic 35.0%
! GCGAGTTTGGATTTTACTAT+TGG + chr4_1:85743595-85743614 None:intergenic 35.0%
CAGGATTTGTAACTCGATAA+TGG + chr4_1:85743669-85743688 None:intergenic 35.0%
ATAATAGATGTCAACCACAG+AGG + chr4_1:85743706-85743725 None:intergenic 35.0%
!!! AGATTTGGTTTGCATTTTCC+TGG - chr4_1:85743731-85743750 Msa0580580:CDS 35.0%
!!! GATTTGGTTTGCATTTTCCT+GGG - chr4_1:85743732-85743751 Msa0580580:CDS 35.0%
GATTAACTGGAGACCATTTA+GGG + chr4_1:85743771-85743790 None:intergenic 35.0%
TGCTTAAAGAACAACGCATA+AGG + chr4_1:85743856-85743875 None:intergenic 35.0%
GTTGTTCTTTAAGCATGACT+TGG - chr4_1:85743861-85743880 Msa0580580:intron 35.0%
AGAATGAGTGAAGGTTAACA+TGG - chr4_1:85743898-85743917 Msa0580580:CDS 35.0%
ATCAATGGTGGTTCTTTCAA+AGG + chr4_1:85744075-85744094 None:intergenic 35.0%
GTATTAGCTGTAATCAATGG+TGG + chr4_1:85744087-85744106 None:intergenic 35.0%
! TCTTGTTATGTGTCAGATGA+TGG - chr4_1:85744150-85744169 Msa0580580:intron 35.0%
AGCTGAATTTGCAAAGAAGT+GGG - chr4_1:85744209-85744228 Msa0580580:intron 35.0%
TTCTCTCTGACAGAAATGAA+AGG + chr4_1:85744471-85744490 None:intergenic 35.0%
AGTTAATGCTATGGTAGCTA+AGG - chr4_1:85744511-85744530 Msa0580580:intron 35.0%
GCATAATTGCTGATCATGAT+AGG - chr4_1:85744660-85744679 Msa0580580:CDS 35.0%
CTCAGACTTTGCAAAGAATA+AGG + chr4_1:85744836-85744855 None:intergenic 35.0%
! AATATCTTCCAGGTTTTCCT+CGG - chr4_1:85744867-85744886 Msa0580580:intron 35.0%
! CTAGAAACATAAACTAGCCT+AGG + chr4_1:85744930-85744949 None:intergenic 35.0%
! AGAAGCAATGTGTTTTCTCA+TGG - chr4_1:85745172-85745191 Msa0580580:CDS 35.0%
CAATACCATCAAATCTTTGG+GGG + chr4_1:85745235-85745254 None:intergenic 35.0%
GGTCAATACCATCAAATCTT+TGG + chr4_1:85745238-85745257 None:intergenic 35.0%
AAAGAAAACTGTATTGCGGT+TGG + chr4_1:85745276-85745295 None:intergenic 35.0%
GACTATAAAATGGGGAAGAT+TGG + chr4_1:85745564-85745583 None:intergenic 35.0%
! ACATTTCAGGTAAACATGAG+AGG - chr4_1:85745596-85745615 Msa0580580:intron 35.0%
ATTCAAGGACCAATGTATGT+GGG - chr4_1:85745629-85745648 Msa0580580:intron 35.0%
ATTGGTGAATTGACCATAGA+AGG + chr4_1:85745701-85745720 None:intergenic 35.0%
! GGTTTCTAGAGATGGAAAAA+GGG - chr4_1:85745763-85745782 Msa0580580:intron 35.0%
CACGCTTATCTGAAAATGAT+AGG + chr4_1:85745850-85745869 None:intergenic 35.0%
TTCAAACTGTAACATTCTCC+TGG - chr4_1:85745880-85745899 Msa0580580:intron 35.0%
TCATTCTCATCATAATCTGC+AGG + chr4_1:85745917-85745936 None:intergenic 35.0%
CAGATTATGATGAGAATGAG+AGG - chr4_1:85745918-85745937 Msa0580580:intron 35.0%
GAATCTGCATTAATGGAGAA+TGG - chr4_1:85746001-85746020 Msa0580580:intron 35.0%
CCATTCATGTAATTAGCTGT+GGG - chr4_1:85746071-85746090 Msa0580580:CDS 35.0%
GTATGAAGAGAAGACTGAAT+GGG - chr4_1:85746093-85746112 Msa0580580:CDS 35.0%
TATGAAGAGAAGACTGAATG+GGG - chr4_1:85746094-85746113 Msa0580580:CDS 35.0%
AAAAGTGAAACTACCTCAAG+TGG + chr4_1:85746235-85746254 None:intergenic 35.0%
! TCTTGTCTTTTCAGATTGGT+TGG - chr4_1:85746296-85746315 Msa0580580:CDS 35.0%
GATTTATGGTTCAGTTACTG+AGG - chr4_1:85746318-85746337 Msa0580580:intron 35.0%
GTTACTGAGGATATCTTAAC+AGG - chr4_1:85746331-85746350 Msa0580580:intron 35.0%
GGATGTAAAAGGGTAAACAA+TGG + chr4_1:85746575-85746594 None:intergenic 35.0%
ACAATAAGCAACTAGAGGAA+GGG + chr4_1:85746596-85746615 None:intergenic 35.0%
TACAATAAGCAACTAGAGGA+AGG + chr4_1:85746597-85746616 None:intergenic 35.0%
AAAGATTAGGAGATTACCGT+TGG + chr4_1:85746661-85746680 None:intergenic 35.0%
AAAGAGAATACTTGCAACGT+TGG + chr4_1:85746907-85746926 None:intergenic 35.0%
GTTGCAAGTATTCTCTTTCT+TGG - chr4_1:85746909-85746928 Msa0580580:intron 35.0%
CCAACATCTTAAGAAATCCT+TGG + chr4_1:85747064-85747083 None:intergenic 35.0%
CCAAGGATTTCTTAAGATGT+TGG - chr4_1:85747061-85747080 Msa0580580:intron 35.0%
ATAATGATAAGGGTTGTTGG+TGG + chr4_1:85747182-85747201 None:intergenic 35.0%
ATATCCTCCATTAAGTGCAT+CGG + chr4_1:85747234-85747253 None:intergenic 35.0%
TTAATGGAGGATATGAGTCT+TGG - chr4_1:85747240-85747259 Msa0580580:intron 35.0%
TAATGGAGGATATGAGTCTT+GGG - chr4_1:85747241-85747260 Msa0580580:intron 35.0%
CTGTCAACTTTGTTCACAAA+TGG + chr4_1:85747428-85747447 None:intergenic 35.0%
CAACTAGTGCTTAGTGAGAA+TGG - chr4_1:85741271-85741290 Msa0580580:three_prime_UTR 40.0%
ACTAGTGCTTAGTGAGAATG+GGG - chr4_1:85741273-85741292 Msa0580580:three_prime_UTR 40.0%
TGAGAATGGGGAAATGTTTG+TGG - chr4_1:85741285-85741304 Msa0580580:three_prime_UTR 40.0%
GTGTAGTTACCCAATGTGTA+AGG - chr4_1:85741318-85741337 Msa0580580:three_prime_UTR 40.0%
CAAAACAGGCCTTACACATT+GGG + chr4_1:85741330-85741349 None:intergenic 40.0%
TCAAAACAGGCCTTACACAT+TGG + chr4_1:85741331-85741350 None:intergenic 40.0%
GTCCCAACAGAAACAAGAAA+CGG - chr4_1:85741749-85741768 Msa0580580:CDS 40.0%
TCCCAACAGAAACAAGAAAC+GGG - chr4_1:85741750-85741769 Msa0580580:CDS 40.0%
AAAAAAAAAACGCCGTTGCC+GGG - chr4_1:85741804-85741823 Msa0580580:CDS 40.0%
ATTGGGTCGTTGTAGTATAG+TGG + chr4_1:85741871-85741890 None:intergenic 40.0%
AAATGTGAGAGAACAGTCTC+AGG + chr4_1:85741930-85741949 None:intergenic 40.0%
! TCTTCGCAGAGTTTGGATTT+TGG + chr4_1:85742008-85742027 None:intergenic 40.0%
AATCCAAACTCTGCGAAGAA+TGG - chr4_1:85742009-85742028 Msa0580580:intron 40.0%
TCATGAAAATCCATCCACAG+TGG - chr4_1:85742153-85742172 Msa0580580:intron 40.0%
TACCTCAGAGTTGTTGATCT+GGG + chr4_1:85742182-85742201 None:intergenic 40.0%
TTACCTCAGAGTTGTTGATC+TGG + chr4_1:85742183-85742202 None:intergenic 40.0%
! GACCACATCTCGAATTTTGT+AGG - chr4_1:85742542-85742561 Msa0580580:CDS 40.0%
! TCTCGAATTTTGTAGGATGG+TGG - chr4_1:85742549-85742568 Msa0580580:CDS 40.0%
ACAGTGTCCTCACTTGATAT+TGG - chr4_1:85742597-85742616 Msa0580580:intron 40.0%
AGCAGCAGATGGAAGAAATT+CGG - chr4_1:85742859-85742878 Msa0580580:CDS 40.0%
CACAATATGCTGTCCATTTG+AGG + chr4_1:85742913-85742932 None:intergenic 40.0%
! ATGTAATTGTCTGAAGCGGA+TGG - chr4_1:85743226-85743245 Msa0580580:CDS 40.0%
TTGGCACGCATAAAGACTAA+AGG + chr4_1:85743272-85743291 None:intergenic 40.0%
ATTTGCATGATCTGCTTTGC+AGG - chr4_1:85743530-85743549 Msa0580580:intron 40.0%
AGTTCTATATGGTGCGAGTT+TGG + chr4_1:85743608-85743627 None:intergenic 40.0%
AATTGTGCGGCTAGTAATCT+TGG - chr4_1:85743633-85743652 Msa0580580:CDS 40.0%
ATTGTGCGGCTAGTAATCTT+GGG - chr4_1:85743634-85743653 Msa0580580:CDS 40.0%
!! AGAGGAAAAGCACTTTCAAC+AGG + chr4_1:85743688-85743707 None:intergenic 40.0%
!!! TTGAAAGTGCTTTTCCTCTG+TGG - chr4_1:85743689-85743708 Msa0580580:CDS 40.0%
TGTTGGATCAGTTCCCTAAA+TGG - chr4_1:85743755-85743774 Msa0580580:CDS 40.0%
CGATTAACTGGAGACCATTT+AGG + chr4_1:85743772-85743791 None:intergenic 40.0%
ATATTGAGAACCTCTCTGCA+AGG - chr4_1:85743800-85743819 Msa0580580:intron 40.0%
TTGATACTGAGCATGCACTT+CGG - chr4_1:85743949-85743968 Msa0580580:CDS 40.0%
CATGACAGGTTTGAAAGAGA+GGG - chr4_1:85744000-85744019 Msa0580580:intron 40.0%
TACAGTGCTTTCTATCCTTG+CGG - chr4_1:85744104-85744123 Msa0580580:intron 40.0%
GCTCACATTTGAATCTCTTG+TGG - chr4_1:85744182-85744201 Msa0580580:intron 40.0%
CAGCTGAATTTGCAAAGAAG+TGG - chr4_1:85744208-85744227 Msa0580580:intron 40.0%
AAGTAATACTCAGGTGCTCT+TGG + chr4_1:85744264-85744283 None:intergenic 40.0%
AAGGTTGCACTTTGTCTTTC+AGG + chr4_1:85744305-85744324 None:intergenic 40.0%
! AGTGCAACCTTCTTTTGTGA+AGG - chr4_1:85744314-85744333 Msa0580580:CDS 40.0%
CTACGTTCCTTCACAAAAGA+AGG + chr4_1:85744324-85744343 None:intergenic 40.0%
AGAAAACACCAGAAGAAGGA+TGG - chr4_1:85744537-85744556 Msa0580580:intron 40.0%
! TGATCACGTGAGTTATTTCC+AGG + chr4_1:85744587-85744606 None:intergenic 40.0%
GACATACCTGAATCATTCCA+GGG + chr4_1:85744610-85744629 None:intergenic 40.0%
TCGAAGGAAATGAACTTCCT+AGG - chr4_1:85744910-85744929 Msa0580580:intron 40.0%
! GTTTCTAGAGAGAAAAGACC+AGG - chr4_1:85744942-85744961 Msa0580580:intron 40.0%
TGTATGGATTTATCCAGGTG+AGG - chr4_1:85745069-85745088 Msa0580580:intron 40.0%
GTATGGATTTATCCAGGTGA+GGG - chr4_1:85745070-85745089 Msa0580580:CDS 40.0%
TTTCTCATGGATCCAGAAGT+TGG - chr4_1:85745185-85745204 Msa0580580:CDS 40.0%
CAAACATCTCTACCAACTTC+TGG + chr4_1:85745200-85745219 None:intergenic 40.0%
GTAAACATGAGAGGACTTGA+TGG - chr4_1:85745605-85745624 Msa0580580:intron 40.0%
CATTCAAGGACCAATGTATG+TGG - chr4_1:85745628-85745647 Msa0580580:intron 40.0%
TTCAAGGACCAATGTATGTG+GGG - chr4_1:85745630-85745649 Msa0580580:intron 40.0%
!!! GGACTGGTTGTGTTTTCAAT+CGG - chr4_1:85745651-85745670 Msa0580580:intron 40.0%
TTCAATCGGCAAGCACTTTA+TGG - chr4_1:85745665-85745684 Msa0580580:intron 40.0%
GTGAATTGACCATAGAAGGT+GGG + chr4_1:85745697-85745716 None:intergenic 40.0%
! GGGTTTCTAGAGATGGAAAA+AGG - chr4_1:85745762-85745781 Msa0580580:intron 40.0%
TCTGCATTAATGGAGAATGG+AGG - chr4_1:85746004-85746023 Msa0580580:intron 40.0%
CATTAATGGAGAATGGAGGA+GGG - chr4_1:85746008-85746027 Msa0580580:intron 40.0%
ATTAATGGAGAATGGAGGAG+GGG - chr4_1:85746009-85746028 Msa0580580:intron 40.0%
ATTGAAGGATCTGCAGATTC+TGG + chr4_1:85746037-85746056 None:intergenic 40.0%
AGATCCTTCAATGCTGATCA+AGG - chr4_1:85746045-85746064 Msa0580580:CDS 40.0%
GCCATTCATGTAATTAGCTG+TGG - chr4_1:85746070-85746089 Msa0580580:CDS 40.0%
CCCACAGCTAATTACATGAA+TGG + chr4_1:85746074-85746093 None:intergenic 40.0%
GGTATGAAGAGAAGACTGAA+TGG - chr4_1:85746092-85746111 Msa0580580:CDS 40.0%
CACCTATCAACTTGTCTGAT+CGG - chr4_1:85746425-85746444 Msa0580580:intron 40.0%
!! AACCGATCAGACAAGTTGAT+AGG + chr4_1:85746430-85746449 None:intergenic 40.0%
CTAGAGGAAGGGATGTAAAA+GGG + chr4_1:85746585-85746604 None:intergenic 40.0%
ACTAGAGGAAGGGATGTAAA+AGG + chr4_1:85746586-85746605 None:intergenic 40.0%
AAATTTCAGTTCAGTCCCCA+TGG - chr4_1:85746721-85746740 Msa0580580:intron 40.0%
! TATGGCGTAATGAGCAGTTT+TGG - chr4_1:85747000-85747019 Msa0580580:intron 40.0%
! ATGGCGTAATGAGCAGTTTT+GGG - chr4_1:85747001-85747020 Msa0580580:intron 40.0%
!!! AATGAGCAGTTTTGGGTGAT+TGG - chr4_1:85747008-85747027 Msa0580580:intron 40.0%
GGATTTCTTAAGATGTTGGC+TGG - chr4_1:85747065-85747084 Msa0580580:intron 40.0%
! GGATTTTCCGATGCACTTAA+TGG - chr4_1:85747224-85747243 Msa0580580:intron 40.0%
! TTTTCCGATGCACTTAATGG+AGG - chr4_1:85747227-85747246 Msa0580580:intron 40.0%
AATGGAGGATATGAGTCTTG+GGG - chr4_1:85747242-85747261 Msa0580580:intron 40.0%
AAGAAAACCTTCCCAAAGAG+AGG + chr4_1:85747269-85747288 None:intergenic 40.0%
! GAAGGTTTTCTTTGCCTTCT+GGG - chr4_1:85747277-85747296 Msa0580580:intron 40.0%
GAGATGAAAAATCACCCAGA+AGG + chr4_1:85747294-85747313 None:intergenic 40.0%
TCATCTCTATCCATTCCTCA+AGG - chr4_1:85747307-85747326 Msa0580580:intron 40.0%
CATCTCTATCCATTCCTCAA+GGG - chr4_1:85747308-85747327 Msa0580580:intron 40.0%
GAATAACAATGGTAGGAGTG+CGG + chr4_1:85747352-85747371 None:intergenic 40.0%
! CTCCTACCATTGTTATTCTG+TGG - chr4_1:85747354-85747373 Msa0580580:intron 40.0%
GACCACAGAATAACAATGGT+AGG + chr4_1:85747359-85747378 None:intergenic 40.0%
CACTGACCACAGAATAACAA+TGG + chr4_1:85747363-85747382 None:intergenic 40.0%
! GGATGCTTACCAAGAGTTTT+TGG - chr4_1:85747498-85747517 Msa0580580:intron 40.0%
TTCCCCACAAATGTTGCAGA+GGG + chr4_1:85741251-85741270 None:intergenic 45.0%
!! GCCCGTTTCTTGTTTCTGTT+GGG + chr4_1:85741754-85741773 None:intergenic 45.0%
AAAAAAAAACGCCGTTGCCG+GGG - chr4_1:85741805-85741824 Msa0580580:CDS 45.0%
TTCCCAGATCAACAACTCTG+AGG - chr4_1:85742177-85742196 Msa0580580:intron 45.0%
!! CGAATTTTGTAGGATGGTGG+AGG - chr4_1:85742552-85742571 Msa0580580:CDS 45.0%
ATGAAAGGCTGGAAAGGGAA+AGG - chr4_1:85742750-85742769 Msa0580580:intron 45.0%
TGAAAGGCTGGAAAGGGAAA+GGG - chr4_1:85742751-85742770 Msa0580580:intron 45.0%
AAAGGGAAAGGGAAAGGGAA+AGG - chr4_1:85742762-85742781 Msa0580580:intron 45.0%
AAGGGAAAGGGAAAGGGAAA+GGG - chr4_1:85742763-85742782 Msa0580580:intron 45.0%
AAAGGGAAAGGGAAAGGGAA+GGG - chr4_1:85742762-85742781 Msa0580580:intron 45.0%
GACTAAGAAGGATGCACCTA+CGG - chr4_1:85742809-85742828 Msa0580580:CDS 45.0%
ATTTCTTCCATCTGCTGCTC+TGG + chr4_1:85742858-85742877 None:intergenic 45.0%
ACTACTTGAGCTGCACACAA+GGG + chr4_1:85743022-85743041 None:intergenic 45.0%
TACTACTTGAGCTGCACACA+AGG + chr4_1:85743023-85743042 None:intergenic 45.0%
GCAGCTCAAGTAGTAAATCG+AGG - chr4_1:85743028-85743047 Msa0580580:intron 45.0%
AGTAAATCGAGGCACGATTG+TGG - chr4_1:85743039-85743058 Msa0580580:intron 45.0%
! GTCTTTCAAGTGCAACCTGA+TGG + chr4_1:85743428-85743447 None:intergenic 45.0%
! GTTTGCATTTTCCTGGGTGT+TGG - chr4_1:85743738-85743757 Msa0580580:CDS 45.0%
TGTGTGTTTACCTTGCAGAG+AGG + chr4_1:85743813-85743832 None:intergenic 45.0%
CCTCTCTTTCAAACCTGTCA+TGG + chr4_1:85744002-85744021 None:intergenic 45.0%
CCATGACAGGTTTGAAAGAG+AGG - chr4_1:85743999-85744018 Msa0580580:intron 45.0%
TCAACAGAAGCAAGTCCAGA+GGG + chr4_1:85744030-85744049 None:intergenic 45.0%
ATCAACAGAAGCAAGTCCAG+AGG + chr4_1:85744031-85744050 None:intergenic 45.0%
GAAGGAACGTAGAGCAATGA+AGG - chr4_1:85744332-85744351 Msa0580580:CDS 45.0%
GCTCAGAAAACACCAGAAGA+AGG - chr4_1:85744533-85744552 Msa0580580:intron 45.0%
TGCATAGTCCATCCTTCTTC+TGG + chr4_1:85744548-85744567 None:intergenic 45.0%
!! GAAGGATGGACTATGCAAGA+TGG - chr4_1:85744551-85744570 Msa0580580:CDS 45.0%
CTATGCAAGATGGAACACCT+TGG - chr4_1:85744561-85744580 Msa0580580:CDS 45.0%
AATAACTCACGTGATCACCC+TGG - chr4_1:85744590-85744609 Msa0580580:CDS 45.0%
TGATCACCCTGGAATGATTC+AGG - chr4_1:85744601-85744620 Msa0580580:CDS 45.0%
GGACATACCTGAATCATTCC+AGG + chr4_1:85744611-85744630 None:intergenic 45.0%
!! TTCTTGTGGTGTTGGTATCC+TGG + chr4_1:85744963-85744982 None:intergenic 45.0%
TACCAACACCACAAGAAAGC+AGG - chr4_1:85744966-85744985 Msa0580580:intron 45.0%
TTTCAGCACCTGCTTTCTTG+TGG + chr4_1:85744977-85744996 None:intergenic 45.0%
GGTTGGCATATCGATCACTA+CGG + chr4_1:85745259-85745278 None:intergenic 45.0%
! AGAGGACTTGATGGCATTCA+AGG - chr4_1:85745614-85745633 Msa0580580:intron 45.0%
GGTGAATTGACCATAGAAGG+TGG + chr4_1:85745698-85745717 None:intergenic 45.0%
CAGCAACAGCATGAAGACAT+TGG + chr4_1:85745719-85745738 None:intergenic 45.0%
AGAAACCCGTGACACTTCTT+TGG + chr4_1:85745750-85745769 None:intergenic 45.0%
CTGCAGGAAGAAAAGAAACC+AGG + chr4_1:85745901-85745920 None:intergenic 45.0%
GCATTAATGGAGAATGGAGG+AGG - chr4_1:85746007-85746026 Msa0580580:intron 45.0%
TCCTTCAATGCTGATCAAGG+AGG - chr4_1:85746048-85746067 Msa0580580:CDS 45.0%
GAAGACTGAATGGGGAAAAG+AGG - chr4_1:85746102-85746121 Msa0580580:CDS 45.0%
CTGAATGGGGAAAAGAGGTT+TGG - chr4_1:85746107-85746126 Msa0580580:CDS 45.0%
CCTTTGAATGCAGGCCTTAA+GGG + chr4_1:85746400-85746419 None:intergenic 45.0%
CCTTAAGGCCTGCATTCAAA+GGG - chr4_1:85746398-85746417 Msa0580580:intron 45.0%
TAAGTAGACATTGCCCCCTT+TGG - chr4_1:85746494-85746513 Msa0580580:intron 45.0%
TCCTCCAACTGCATACCAAA+GGG + chr4_1:85746512-85746531 None:intergenic 45.0%
ATCTCTGCAGCCATTTGAGA+CGG + chr4_1:85746537-85746556 None:intergenic 45.0%
TCTCAAATGGCTGCAGAGAT+TGG - chr4_1:85746537-85746556 Msa0580580:intron 45.0%
!! CATCTGTTTGCTGTGTTCCA+AGG - chr4_1:85747044-85747063 Msa0580580:intron 45.0%
!! AACATGGTTGGTGTTGTTGC+TGG - chr4_1:85747203-85747222 Msa0580580:intron 45.0%
! GGAAGGTTTTCTTTGCCTTC+TGG - chr4_1:85747276-85747295 Msa0580580:intron 45.0%
GCTATGACTCACACAAGCAA+TGG + chr4_1:85747567-85747586 None:intergenic 45.0%
TGTGTGAGTCATAGCTCATG+AGG - chr4_1:85747572-85747591 Msa0580580:CDS 45.0%
CTCCCCTCTGCAACATTTGT+GGG - chr4_1:85741245-85741264 Msa0580580:three_prime_UTR 50.0%
TCCCCTCTGCAACATTTGTG+GGG - chr4_1:85741246-85741265 Msa0580580:three_prime_UTR 50.0%
TCCCCACAAATGTTGCAGAG+GGG + chr4_1:85741250-85741269 None:intergenic 50.0%
GTTCCCCACAAATGTTGCAG+AGG + chr4_1:85741252-85741271 None:intergenic 50.0%
AAGTGTGGCACTCCCTATGA+AGG - chr4_1:85741385-85741404 Msa0580580:exon 50.0%
!! GGCCCGTTTCTTGTTTCTGT+TGG + chr4_1:85741755-85741774 None:intergenic 50.0%
CCACCATTCTTCGCAGAGTT+TGG + chr4_1:85742015-85742034 None:intergenic 50.0%
CCAAACTCTGCGAAGAATGG+TGG - chr4_1:85742012-85742031 Msa0580580:intron 50.0%
GACGACGACGATGACATTGT+GGG - chr4_1:85742130-85742149 Msa0580580:intron 50.0%
GCTGGAAAGGGAAAGGGAAA+GGG - chr4_1:85742757-85742776 Msa0580580:intron 50.0%
GAAAGGGAAAGGGAAAGGGA+AGG - chr4_1:85742761-85742780 Msa0580580:intron 50.0%
AAGGGAAAGGGAAAGGGAAG+GGG - chr4_1:85742769-85742788 Msa0580580:CDS 50.0%
TGCACCTACGGCTGAAAATG+AGG - chr4_1:85742821-85742840 Msa0580580:CDS 50.0%
ATCGAGGCACGATTGTGGTT+TGG - chr4_1:85743044-85743063 Msa0580580:intron 50.0%
CTACTGGATAGTCAACCGCA+AGG + chr4_1:85744122-85744141 None:intergenic 50.0%
! CGTGAGTTATTTCCAGGCCA+AGG + chr4_1:85744581-85744600 None:intergenic 50.0%
AGTGGTGCTCGTGATATCGA+AGG - chr4_1:85744894-85744913 Msa0580580:intron 50.0%
CACCTGCTTTCTTGTGGTGT+TGG + chr4_1:85744971-85744990 None:intergenic 50.0%
GATTGGAAGCTAGAGGGTTG+TGG + chr4_1:85745547-85745566 None:intergenic 50.0%
GGGGAAGATTGGAAGCTAGA+GGG + chr4_1:85745553-85745572 None:intergenic 50.0%
TGGGGAAGATTGGAAGCTAG+AGG + chr4_1:85745554-85745573 None:intergenic 50.0%
CAACCAGTCCCCACATACAT+TGG + chr4_1:85745641-85745660 None:intergenic 50.0%
TGGCTATAGCCCACCTTCTA+TGG - chr4_1:85745685-85745704 Msa0580580:intron 50.0%
GTGACACTTCTTTGGTGGAG+GGG + chr4_1:85745742-85745761 None:intergenic 50.0%
CGTGACACTTCTTTGGTGGA+GGG + chr4_1:85745743-85745762 None:intergenic 50.0%
!! CCTCCACCAAAGAAGTGTCA+CGG - chr4_1:85745741-85745760 Msa0580580:intron 50.0%
!! CTCCACCAAAGAAGTGTCAC+GGG - chr4_1:85745742-85745761 Msa0580580:intron 50.0%
AACCCGTGACACTTCTTTGG+TGG + chr4_1:85745747-85745766 None:intergenic 50.0%
! GTGTCACGGGTTTCTAGAGA+TGG - chr4_1:85745755-85745774 Msa0580580:intron 50.0%
! GCCTCCTTGATCAGCATTGA+AGG + chr4_1:85746052-85746071 None:intergenic 50.0%
AGTAGATCGACCTCCATCCT+CGG + chr4_1:85746372-85746391 None:intergenic 50.0%
CGATCTACTGCATGCCCTTA+AGG - chr4_1:85746383-85746402 Msa0580580:intron 50.0%
CCCTTAAGGCCTGCATTCAA+AGG - chr4_1:85746397-85746416 Msa0580580:intron 50.0%
CCCTTTGAATGCAGGCCTTA+AGG + chr4_1:85746401-85746420 None:intergenic 50.0%
GTTGCACCAAGTCCTTCGAT+GGG - chr4_1:85746447-85746466 Msa0580580:intron 50.0%
CTCCAACTGCATACCAAAGG+GGG + chr4_1:85746510-85746529 None:intergenic 50.0%
CCTCCAACTGCATACCAAAG+GGG + chr4_1:85746511-85746530 None:intergenic 50.0%
CTCCTCCAACTGCATACCAA+AGG + chr4_1:85746513-85746532 None:intergenic 50.0%
CTTTGGTATGCAGTTGGAGG+AGG - chr4_1:85746511-85746530 Msa0580580:intron 50.0%
CCTGTGAGAAGGCAAATTGC+TGG + chr4_1:85746625-85746644 None:intergenic 50.0%
CCAGCAATTTGCCTTCTCAC+AGG - chr4_1:85746622-85746641 Msa0580580:intron 50.0%
!!! GAGCAGTTTTGGGTGATTGG+AGG - chr4_1:85747011-85747030 Msa0580580:intron 50.0%
CTTGGCAGTGACAGTGAAGT+TGG + chr4_1:85747099-85747118 None:intergenic 50.0%
CAACTTCACTGTCACTGCCA+AGG - chr4_1:85747097-85747116 Msa0580580:intron 50.0%
AGTCTTGGGGACCTCTCTTT+GGG - chr4_1:85747255-85747274 Msa0580580:intron 50.0%
TCCATTCCTCAAGGGTCTCA+TGG - chr4_1:85747316-85747335 Msa0580580:intron 50.0%
CCATTCCTCAAGGGTCTCAT+GGG - chr4_1:85747317-85747336 Msa0580580:intron 50.0%
CATTCCTCAAGGGTCTCATG+GGG - chr4_1:85747318-85747337 Msa0580580:intron 50.0%
!! CAATGGTAGGAGTGCGGTTT+TGG + chr4_1:85747346-85747365 None:intergenic 50.0%
! AATGTTGCAGAGGGGAGCAC+CGG + chr4_1:85741242-85741261 None:intergenic 55.0%
GCTCCCCTCTGCAACATTTG+TGG - chr4_1:85741244-85741263 Msa0580580:three_prime_UTR 55.0%
AAGTATTCCCGCCTGTCACG+CGG + chr4_1:85741847-85741866 None:intergenic 55.0%
CGACGACGACGATGACATTG+TGG - chr4_1:85742129-85742148 Msa0580580:intron 55.0%
ATCTGGGAAGCCACTGTGGA+TGG + chr4_1:85742166-85742185 None:intergenic 55.0%
GTTGATCTGGGAAGCCACTG+TGG + chr4_1:85742170-85742189 None:intergenic 55.0%
GGCTGGAAAGGGAAAGGGAA+AGG - chr4_1:85742756-85742775 Msa0580580:intron 55.0%
! GCAGCCTCATTTTCAGCCGT+AGG + chr4_1:85742828-85742847 None:intergenic 55.0%
AGTTCCACCAGAGCAGCAGA+TGG - chr4_1:85742848-85742867 Msa0580580:CDS 55.0%
TCTTCCATCTGCTGCTCTGG+TGG + chr4_1:85742855-85742874 None:intergenic 55.0%
TCTGCTTTGCAGGTCCACAG+AGG - chr4_1:85743540-85743559 Msa0580580:intron 55.0%
AGGGAACTGATCCAACACCC+AGG + chr4_1:85743752-85743771 None:intergenic 55.0%
CAAGATGGAACACCTTGGCC+TGG - chr4_1:85744566-85744585 Msa0580580:CDS 55.0%
CACTGTGTCCGAGGAAAACC+TGG + chr4_1:85744878-85744897 None:intergenic 55.0%
! CAGGTTTTCCTCGGACACAG+TGG - chr4_1:85744876-85744895 Msa0580580:intron 55.0%
!! AGCAGGTGCTGAAAACGCAC+TGG - chr4_1:85744983-85745002 Msa0580580:intron 55.0%
GGACCAATGTATGTGGGGAC+TGG - chr4_1:85745635-85745654 Msa0580580:intron 55.0%
CCGTGACACTTCTTTGGTGG+AGG + chr4_1:85745744-85745763 None:intergenic 55.0%
! TCAAGATGCAGTGCCGAGGA+TGG - chr4_1:85746356-85746375 Msa0580580:intron 55.0%
!! GGTGCTGACCCTTTGAATGC+AGG + chr4_1:85746409-85746428 None:intergenic 55.0%
GGTTGCACCAAGTCCTTCGA+TGG - chr4_1:85746446-85746465 Msa0580580:intron 55.0%
CAAGTGCCCATCGAAGGACT+TGG + chr4_1:85746456-85746475 None:intergenic 55.0%
CAAGTCCTTCGATGGGCACT+TGG - chr4_1:85746454-85746473 Msa0580580:intron 55.0%
CTGATCCAAGTGCCCATCGA+AGG + chr4_1:85746462-85746481 None:intergenic 55.0%
TGCCCCCTTTGGTATGCAGT+TGG - chr4_1:85746505-85746524 Msa0580580:intron 55.0%
CCCCTTTGGTATGCAGTTGG+AGG - chr4_1:85746508-85746527 Msa0580580:intron 55.0%
TTGGAGGAGGCCGTCTCAAA+TGG - chr4_1:85746524-85746543 Msa0580580:intron 55.0%
CAAGTGTGCTTGAGCTGCGT+TGG - chr4_1:85746955-85746974 Msa0580580:intron 55.0%
GCTGCTGAGGATACCGAGTT+TGG - chr4_1:85747119-85747138 Msa0580580:intron 55.0%
GAGTCTTGGGGACCTCTCTT+TGG - chr4_1:85747254-85747273 Msa0580580:intron 55.0%
! TTGGGGACCTCTCTTTGGGA+AGG - chr4_1:85747259-85747278 Msa0580580:intron 55.0%
CCCATGAGACCCTTGAGGAA+TGG + chr4_1:85747320-85747339 None:intergenic 55.0%
AGTATTCCCGCCTGTCACGC+GGG + chr4_1:85741846-85741865 None:intergenic 60.0%
GAAAGAGAGGGCGAACCCTC+TGG - chr4_1:85744012-85744031 Msa0580580:intron 60.0%
GAACTGCAGACACCCTCACC+TGG + chr4_1:85745085-85745104 None:intergenic 60.0%
GGGTTCAAGATGCAGTGCCG+AGG - chr4_1:85746352-85746371 Msa0580580:intron 60.0%
! AGATGCAGTGCCGAGGATGG+AGG - chr4_1:85746359-85746378 Msa0580580:intron 60.0%
GTGCTTGAGCTGCGTTGGAG+TGG - chr4_1:85746960-85746979 Msa0580580:intron 60.0%
TGTCACTGCCAAGGCTGCTG+AGG - chr4_1:85747106-85747125 Msa0580580:intron 60.0%
CTCGGTATCCTCAGCAGCCT+TGG + chr4_1:85747117-85747136 None:intergenic 60.0%
!! TTGCAGAGGGGAGCACCGGA+AGG + chr4_1:85741238-85741257 None:intergenic 65.0%
TGGCAGAGCAGCAGCCTCTG+TGG + chr4_1:85743557-85743576 None:intergenic 65.0%
CACGAGCACCACTGTGTCCG+AGG + chr4_1:85744887-85744906 None:intergenic 65.0%
CCGGGTTCGATCCCCGGCAA+CGG + chr4_1:85741819-85741838 None:intergenic 70.0%
CCGTTGCCGGGGATCGAACC+CGG - chr4_1:85741816-85741835 Msa0580580:CDS 70.0%
CGTTGCCGGGGATCGAACCC+GGG - chr4_1:85741817-85741836 Msa0580580:CDS 70.0%
GGTGACCCGGGTTCGATCCC+CGG + chr4_1:85741825-85741844 None:intergenic 70.0%
GGCGCCCCATGAGACCCTTG+AGG + chr4_1:85747325-85747344 None:intergenic 70.0%
ACCCGGGTCACCCGCGTGAC+AGG - chr4_1:85741833-85741852 Msa0580580:CDS 75.0%
GCCTGTCACGCGGGTGACCC+GGG + chr4_1:85741837-85741856 None:intergenic 75.0%
CGCCTGTCACGCGGGTGACC+CGG + chr4_1:85741838-85741857 None:intergenic 75.0%
CGGGTCACCCGCGTGACAGG+CGG - chr4_1:85741836-85741855 Msa0580580:CDS 75.0%
GGGTCACCCGCGTGACAGGC+GGG - chr4_1:85741837-85741856 Msa0580580:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85741229 85747662 85741229 ID=Msa0580580;Name=Msa0580580
chr4_1 mRNA 85741229 85747662 85741229 ID=Msa0580580-mRNA-1;Parent=Msa0580580;Name=Msa0580580-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.90|0.91|1|1|0.91|12|175|945
chr4_1 exon 85741229 85741991 85741229 ID=Msa0580580-mRNA-1:exon:31564;Parent=Msa0580580-mRNA-1
chr4_1 exon 85742228 85742581 85742228 ID=Msa0580580-mRNA-1:exon:31563;Parent=Msa0580580-mRNA-1
chr4_1 exon 85742768 85742970 85742768 ID=Msa0580580-mRNA-1:exon:31562;Parent=Msa0580580-mRNA-1
chr4_1 exon 85743064 85743286 85743064 ID=Msa0580580-mRNA-1:exon:31561;Parent=Msa0580580-mRNA-1
chr4_1 exon 85743593 85743805 85743593 ID=Msa0580580-mRNA-1:exon:31560;Parent=Msa0580580-mRNA-1
chr4_1 exon 85743887 85744012 85743887 ID=Msa0580580-mRNA-1:exon:31559;Parent=Msa0580580-mRNA-1
chr4_1 exon 85744269 85744406 85744269 ID=Msa0580580-mRNA-1:exon:31558;Parent=Msa0580580-mRNA-1
chr4_1 exon 85744538 85744883 85744538 ID=Msa0580580-mRNA-1:exon:31557;Parent=Msa0580580-mRNA-1
chr4_1 exon 85745070 85745339 85745070 ID=Msa0580580-mRNA-1:exon:31556;Parent=Msa0580580-mRNA-1
chr4_1 exon 85746011 85746185 85746011 ID=Msa0580580-mRNA-1:exon:31555;Parent=Msa0580580-mRNA-1
chr4_1 exon 85746273 85746327 85746273 ID=Msa0580580-mRNA-1:exon:31554;Parent=Msa0580580-mRNA-1
chr4_1 exon 85747516 85747662 85747516 ID=Msa0580580-mRNA-1:exon:31553;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85747516 85747662 85747516 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85746273 85746327 85746273 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85746011 85746185 85746011 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85745070 85745339 85745070 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85744538 85744883 85744538 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85744269 85744406 85744269 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85743887 85744012 85743887 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85743593 85743805 85743593 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85743064 85743286 85743064 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85742768 85742970 85742768 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85742228 85742581 85742228 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 CDS 85741404 85741991 85741404 ID=Msa0580580-mRNA-1:cds;Parent=Msa0580580-mRNA-1
chr4_1 three_prime_UTR 85741229 85741403 85741229 ID=Msa0580580-mRNA-1:three_prime_utr;Parent=Msa0580580-mRNA-1
Gene Sequence

>Msa0580580

ATGATGCCTTCCGGTGCTCCCCTCTGCAACATTTGTGGGGAACAACTAGTGCTTAGTGAGAATGGGGAAATGTTTGTGGCTTGTCATGAGTGTAGTTACCCAATGTGTAAGGCCTGTTTTGAACATGAAATCAATGAAGGACATAAGGATGGTGGAGGACTTCATGCTAGACATATCAGTACAGTGTCCTCACTTGATATTGAAGAAGTAAATGAAGAATCTGGGAATTCAAAATGGAAAAATAGAATGAAAGGCTGGAAAGGGAAAGGGAAAGGGAAAGGGAAGGGGAAAGACAAAAAGAACAAGACTAAGAAGGATGCACCTACGGCTGAAAATGAGGCTGCAGTTCCACCAGAGCAGCAGATGGAAGAAATTCGGTCCACAGAGGCTGCTGCTCTGCCACTTTCAGTACTTATGCCAATAGTAAAATCCAAACTCGCACCATATAGAACTGTGATAATTGTGCGGCTAGTAATCTTGGGTCTTTTCTTCCATTATCGAGTTACAAATCCTGTTGAAAGTGCTTTTCCTCTGTGGTTGACATCTATTATATGTGAGATTTGGTTTGCATTTTCCTGGGTGTTGGATCAGTTCCCTAAATGGTCTCCAGTTAATCGACACACTTATATTGAGAACCTCTCTGCAAGGTTTGAAAGAGAGGGCGAACCCTCTGGACTTGCTTCTGTTGATTTTTTTGTCAGTACAGTCGATCCTTTGAAAGAACCACCATTGATTACAGCTAATACAGTGCTTTCTATCCTTGCGGTTGACTATCCAGTAGATAAAGTATCTTGTTATGTGTCAGATGATGGAGCAGCAATGCTCACATTTGAATCTCTTGTGGAGACAGCTGAATTTGCAAAGAAGTGGGTGCCGTTTTGCAAAAAGTTTTCAATTGAACCAAGAGCACCTGAGTATTACTTCTCACAAAAGATTGACTACCTGAAAGACAAAGTGCAACCTTCTTTTGTGAAGGAACGTAGAGCAATGAAGAGAGAATATGAAGAGTATAAAGTACGAGTTAATGCTATGGTAGCTAAGGCTCAGAAAACACCAGAAGAAGGATGGACTATGCAAGATGGAACACCTTGGCCTGGAAATAACTCACGTGATCACCCTGGAATGATTCAGGTTTTCCTCGGACACAGTGGTGCTCGTGATATCGAAGGAAATGAACTTCCTAGGCTAGTTTATGTTTCTAGAGAGAAAAGACCAGGATACCAACACCACAAGAAAGCAGGTGCTGAAAACGCACTGGTGAGGGTGTCTGCAGTTCTCACAAATGCTCCCTTCATTCTCAATCTTGATTGTGATCATTATGTTAACAACAGCAAGGCTGTTCGAGAAGCAATGTGTTTTCTCATGGATCCAGAAGTTGGTAGAGATGTTTGTTATGTACAATTCCCCCAAAGATTTGATGGTATTGACCGTAGTGATCGATATGCCAACCGCAATACAGTTTTCTTTGATGTAAACATGAGAGGACTTGATGGCATTCAAGGACCAATGTATGTGGGGACTGGTTGTGTTTTCAATCGGCAAGCACTTTATGGCTATAGCCCACCTTCTATGGTCAATTCACCAATGTCTTCATGCTGTTGCTGCCCCTCCACCAAAGAAGTGTCACGGGTTTCTAGAGATGGAAAAAGGGCAGAACTTGATGCTGCAATTTATAATCTCAGGGAGATTGATAATTATGATGAGAATGAGAGGTCAATGCTAATTTCACAAATGAGCTTTGAAAAAACTTTTGGCTTGTCTACTGTTTTCATTGAATCTGCATTAATGGAGAATGGAGGAGGGGTACCAGAATCTGCAGATCCTTCAATGCTGATCAAGGAGGCCATTCATGTAATTAGCTGTGGGTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGTTGGATTTATGGTTCAGTTACTGAGGATATCTTAACAGGGTTCAAGATGCAGTGCCGAGGATGGAGGTCGATCTACTGCATGCCCTTAAGGCCTGCATTCAAAGGGTCAGCACCTATCAACTTGTCTGATCGGTTGCACCAAGTCCTTCGATGGGCACTTGGATCAGTTGAAATTTTCTTAAGTAGACATTGCCCCCTTTGGTATGCAGTTGGAGGAGGCCGTCTCAAATGGCTGCAGAGATTGGCTTATATAAACACCATTGTTTACCCTTTTACATCCCTTCCTCTAGTTGCTTATTGTACTTTGCCAGCAATTTGCCTTCTCACAGGAAAATTTATCATACCAACGCTTACCAACGTTGCAAGTATTCTCTTTCTTGGACTTTTTCTCTCTATTATAGTGACAAGTGTGCTTGAGCTGCGTTGGAGTGGTGTTTGTATTGAAGATTTATGGCGTAATGAGCAGTTTTGGGTGATTGGAGGTTCTTCAGCTCATCTGTTTGCTGTGTTCCAAGGATTTCTTAAGATGTTGGCTGGTGTTGATACCAACTTCACTGTCACTGCCAAGGCTGCTGAGGATACCGAGTTTGGTGAACTTTATATTATCAAGTGGACTACTCTCTTGATTCCACCAACAACCCTTATCATTATTAACATGGTTGGTGTTGTTGCTGGATTTTCCGATGCACTTAATGGAGGATATGAGTCTTGGGGACCTCTCTTTGGGAAGGTTTTCTTTGCCTTCTGGGTGATTTTTCATCTCTATCCATTCCTCAAGGGTCTCATGGGGCGCCAAAACCGCACTCCTACCATTGTTATTCTGTGGTCAGTGTTGTTAGCCTCTGTCTTTTCTATTATTTGGGTCAAGATAGACCCATTTGTGAACAAAGTTGACAGTGAGAGCATCGCTGAAACTTGTGTTGCTATAGATTGTTAA
Protein sequence

>Msa0580580

MMPSGAPLCNICGEQLVLSENGEMFVACHECSYPMCKACFEHEINEGHKDGGGLHARHISTVSSLDIEEVNEESGNSKWKNRMKGWKGKGKGKGKGKDKKNKTKKDAPTAENEAAVPPEQQMEEIRSTEAAALPLSVLMPIVKSKLAPYRTVIIVRLVILGLFFHYRVTNPVESAFPLWLTSIICEIWFAFSWVLDQFPKWSPVNRHTYIENLSARFEREGEPSGLASVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETAEFAKKWVPFCKKFSIEPRAPEYYFSQKIDYLKDKVQPSFVKERRAMKREYEEYKVRVNAMVAKAQKTPEEGWTMQDGTPWPGNNSRDHPGMIQVFLGHSGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPEVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMRGLDGIQGPMYVGTGCVFNRQALYGYSPPSMVNSPMSSCCCCPSTKEVSRVSRDGKRAELDAAIYNLREIDNYDENERSMLISQMSFEKTFGLSTVFIESALMENGGGVPESADPSMLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMQCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAVGGGRLKWLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLTNVASILFLGLFLSIIVTSVLELRWSGVCIEDLWRNEQFWVIGGSSAHLFAVFQGFLKMLAGVDTNFTVTAKAAEDTEFGELYIIKWTTLLIPPTTLIIINMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSIIWVKIDPFVNKVDSESIAETCVAIDC*