Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0618050 | XP_003629793.4 | 98.184 | 991 | 15 | 2 | 1 | 988 | 1 | 991 | 0.0 | 2017 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0618050 | sp|Q8LPK5|CESA8_ARATH | 76.730 | 997 | 211 | 8 | 1 | 988 | 1 | 985 | 0.0 | 1578 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0618050 | G7LJG4 | 98.184 | 991 | 15 | 2 | 1 | 988 | 1 | 991 | 0.0 | 2017 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0018060 | Msa0618050 | 0.863967 | 1.705754e-64 | -8.615850e-47 |
Msa0052380 | Msa0618050 | 0.878504 | 2.663147e-69 | -8.615850e-47 |
Msa0097390 | Msa0618050 | 0.881860 | 1.689762e-70 | -8.615850e-47 |
Msa0618050 | Msa0618600 | 0.892555 | 1.424468e-74 | -8.615850e-47 |
Msa0618050 | Msa0643240 | 0.815038 | 1.134670e-51 | -8.615850e-47 |
Msa0618050 | Msa0657380 | 0.857135 | 2.005599e-62 | -8.615850e-47 |
Msa0618050 | Msa0682920 | 0.820214 | 7.718447e-53 | -8.615850e-47 |
Msa0618050 | Msa0708510 | 0.891278 | 4.596459e-74 | -8.615850e-47 |
Msa0618050 | Msa0710160 | 0.827701 | 1.352564e-54 | -8.615850e-47 |
Msa0618050 | Msa0726330 | 0.832338 | 1.000509e-55 | -8.615850e-47 |
Msa0618050 | Msa0761430 | 0.824797 | 6.642898e-54 | -8.615850e-47 |
Msa0618050 | Msa0804360 | 0.842977 | 1.859819e-58 | -8.615850e-47 |
Msa0618050 | Msa0842030 | 0.826034 | 3.384776e-54 | -8.615850e-47 |
Msa0618050 | Msa1035290 | 0.814937 | 1.194677e-51 | -8.615850e-47 |
Msa0618050 | Msa1075380 | 0.844024 | 9.765556e-59 | -8.615850e-47 |
Msa0618050 | Msa1116460 | 0.833486 | 5.189026e-56 | -8.615850e-47 |
Msa0618050 | Msa1162860 | 0.880131 | 7.064791e-70 | -8.615850e-47 |
Msa0618050 | Msa1199250 | 0.852215 | 5.342760e-61 | -8.615850e-47 |
Msa0618050 | Msa1199260 | 0.884832 | 1.369233e-71 | -8.615850e-47 |
Msa0618050 | Msa1199270 | 0.825779 | 3.890660e-54 | -8.615850e-47 |
Msa0618050 | Msa1252480 | 0.864256 | 1.385565e-64 | -8.615850e-47 |
Msa0618050 | Msa1290460 | 0.885083 | 1.103637e-71 | -8.615850e-47 |
Msa0618050 | Msa1418990 | 0.871296 | 7.613179e-67 | -8.615850e-47 |
Msa0618050 | Msa1421310 | 0.861465 | 1.006723e-63 | -8.615850e-47 |
Msa0221830 | Msa0618050 | 0.878063 | 3.801498e-69 | -8.615850e-47 |
Msa0228250 | Msa0618050 | 0.812728 | 3.663803e-51 | -8.615850e-47 |
Msa0365530 | Msa0618050 | 0.811700 | 6.141175e-51 | -8.615850e-47 |
Msa0250450 | Msa0618050 | 0.881971 | 1.539704e-70 | -8.615850e-47 |
Msa0263440 | Msa0618050 | 0.838619 | 2.581755e-57 | -8.615850e-47 |
Msa0289060 | Msa0618050 | 0.813495 | 2.486504e-51 | -8.615850e-47 |
Msa0289100 | Msa0618050 | 0.811488 | 6.829116e-51 | -8.615850e-47 |
Msa0301030 | Msa0618050 | 0.877770 | 4.813078e-69 | -8.615850e-47 |
Msa0314220 | Msa0618050 | 0.814836 | 1.257807e-51 | -8.615850e-47 |
Msa0327020 | Msa0618050 | 0.861650 | 8.836519e-64 | -8.615850e-47 |
Msa0333070 | Msa0618050 | 0.803643 | 3.161179e-49 | -8.615850e-47 |
Msa0485970 | Msa0618050 | 0.988527 | 2.271796e-174 | -8.615850e-47 |
Msa0547390 | Msa0618050 | 0.882207 | 1.263604e-70 | -8.615850e-47 |
Msa0564950 | Msa0618050 | 0.970202 | 2.923738e-131 | -8.615850e-47 |
Msa0565260 | Msa0618050 | 0.868582 | 5.864836e-66 | -8.615850e-47 |
Msa0580580 | Msa0618050 | 0.993066 | 3.147728e-197 | -8.615850e-47 |
Msa0602110 | Msa0618050 | 0.849557 | 2.995022e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0618050 | MtrunA17_Chr8g0379241 | 98.184 | 991 | 15 | 2 | 1 | 988 | 1 | 991 | 0.0 | 2017 |
Msa0618050 | MtrunA17_Chr2g0284211 | 82.211 | 995 | 154 | 8 | 1 | 988 | 1 | 979 | 0.0 | 1669 |
Msa0618050 | MtrunA17_Chr2g0296991 | 64.078 | 1030 | 308 | 13 | 4 | 988 | 32 | 1044 | 0.0 | 1342 |
Msa0618050 | MtrunA17_Chr4g0073711 | 63.762 | 1010 | 304 | 12 | 8 | 974 | 36 | 1026 | 0.0 | 1316 |
Msa0618050 | MtrunA17_Chr3g0088821 | 60.651 | 1075 | 327 | 15 | 1 | 988 | 13 | 1078 | 0.0 | 1299 |
Msa0618050 | MtrunA17_Chr8g0352231 | 60.316 | 1076 | 329 | 16 | 1 | 988 | 13 | 1078 | 0.0 | 1274 |
Msa0618050 | MtrunA17_Chr1g0201731 | 58.673 | 1055 | 339 | 12 | 8 | 975 | 42 | 1086 | 0.0 | 1257 |
Msa0618050 | MtrunA17_Chr3g0137951 | 67.978 | 890 | 252 | 11 | 120 | 988 | 210 | 1087 | 0.0 | 1252 |
Msa0618050 | MtrunA17_Chr3g0137951 | 48.077 | 52 | 27 | 0 | 8 | 59 | 39 | 90 | 3.02e-11 | 67.8 |
Msa0618050 | MtrunA17_Chr8g0383701 | 65.172 | 870 | 281 | 5 | 120 | 973 | 220 | 1083 | 0.0 | 1236 |
Msa0618050 | MtrunA17_Chr1g0183381 | 62.338 | 924 | 301 | 11 | 82 | 984 | 5 | 902 | 0.0 | 1186 |
Msa0618050 | MtrunA17_Chr7g0267731 | 61.787 | 929 | 332 | 12 | 78 | 988 | 63 | 986 | 0.0 | 1162 |
Msa0618050 | MtrunA17_Chr3g0078671 | 55.005 | 1029 | 396 | 14 | 9 | 988 | 39 | 1049 | 0.0 | 1150 |
Msa0618050 | MtrunA17_Chr8g0364641 | 53.163 | 980 | 420 | 12 | 9 | 985 | 37 | 980 | 0.0 | 1096 |
Msa0618050 | MtrunA17_Chr4g0039801 | 45.646 | 1045 | 433 | 24 | 12 | 969 | 132 | 1128 | 0.0 | 866 |
Msa0618050 | MtrunA17_Chr5g0410641 | 44.648 | 1037 | 456 | 18 | 12 | 969 | 110 | 1107 | 0.0 | 857 |
Msa0618050 | MtrunA17_Chr1g0165411 | 43.756 | 1033 | 446 | 19 | 9 | 969 | 120 | 1089 | 0.0 | 830 |
Msa0618050 | MtrunA17_Chr1g0165421 | 43.666 | 1042 | 455 | 21 | 9 | 969 | 127 | 1117 | 0.0 | 814 |
Msa0618050 | MtrunA17_Chr7g0269741 | 48.568 | 873 | 356 | 16 | 177 | 969 | 297 | 1156 | 0.0 | 811 |
Msa0618050 | MtrunA17_Chr2g0297351 | 44.596 | 953 | 409 | 18 | 102 | 969 | 92 | 1010 | 0.0 | 790 |
Msa0618050 | MtrunA17_Chr7g0274751 | 43.349 | 842 | 289 | 20 | 177 | 969 | 96 | 798 | 0.0 | 615 |
Msa0618050 | MtrunA17_Chr2g0322361 | 34.259 | 756 | 413 | 16 | 222 | 960 | 52 | 740 | 7.46e-130 | 410 |
Msa0618050 | MtrunA17_Chr2g0322371 | 33.466 | 753 | 424 | 14 | 222 | 965 | 47 | 731 | 1.07e-127 | 404 |
Msa0618050 | MtrunA17_Chr3g0102531 | 33.626 | 684 | 374 | 11 | 192 | 871 | 21 | 628 | 2.17e-126 | 400 |
Msa0618050 | MtrunA17_Chr2g0322351 | 34.697 | 758 | 422 | 20 | 209 | 960 | 37 | 727 | 4.75e-123 | 392 |
Msa0618050 | MtrunA17_Chr4g0046401 | 32.463 | 804 | 447 | 20 | 174 | 960 | 6 | 730 | 6.65e-123 | 391 |
Msa0618050 | MtrunA17_Chr4g0025201 | 32.661 | 744 | 419 | 14 | 209 | 939 | 37 | 711 | 1.85e-120 | 385 |
Msa0618050 | MtrunA17_Chr1g0186381 | 30.097 | 824 | 475 | 16 | 168 | 974 | 1 | 740 | 8.18e-119 | 380 |
Msa0618050 | MtrunA17_Chr3g0095791 | 29.948 | 768 | 441 | 15 | 185 | 944 | 11 | 689 | 8.95e-110 | 355 |
Msa0618050 | MtrunA17_Chr2g0298581 | 30.418 | 766 | 441 | 15 | 185 | 944 | 11 | 690 | 1.03e-108 | 352 |
Msa0618050 | MtrunA17_Chr2g0307191 | 30.065 | 765 | 431 | 14 | 193 | 945 | 19 | 691 | 3.03e-107 | 348 |
Msa0618050 | MtrunA17_Chr3g0077511 | 28.349 | 769 | 457 | 14 | 185 | 945 | 11 | 693 | 9.37e-99 | 326 |
Msa0618050 | MtrunA17_Chr3g0102541 | 42.297 | 357 | 191 | 7 | 209 | 561 | 38 | 383 | 1.53e-87 | 296 |
Msa0618050 | MtrunA17_Chr3g0102541 | 32.328 | 232 | 155 | 1 | 640 | 871 | 400 | 629 | 9.79e-33 | 136 |
Msa0618050 | MtrunA17_Chr3g0102551 | 38.557 | 402 | 212 | 10 | 180 | 561 | 7 | 393 | 1.49e-86 | 294 |
Msa0618050 | MtrunA17_Chr3g0102551 | 30.065 | 306 | 203 | 5 | 661 | 957 | 426 | 729 | 2.99e-35 | 144 |
Msa0618050 | MtrunA17_Chr2g0322341 | 41.693 | 319 | 172 | 5 | 209 | 527 | 39 | 343 | 7.13e-79 | 261 |
Msa0618050 | MtrunA17_Chr3g0126641 | 45.540 | 213 | 90 | 4 | 503 | 697 | 6 | 210 | 2.49e-47 | 168 |
Msa0618050 | MtrunA17_Chr2g0322331 | 31.267 | 371 | 234 | 10 | 604 | 960 | 8 | 371 | 1.62e-46 | 171 |
Msa0618050 | MtrunA17_Chr0c03g0490021 | 63.934 | 122 | 43 | 1 | 817 | 937 | 1 | 122 | 2.11e-43 | 154 |
Msa0618050 | MtrunA17_Chr2g0307241 | 34.694 | 196 | 108 | 4 | 193 | 388 | 19 | 194 | 2.85e-30 | 119 |
Msa0618050 | MtrunA17_Chr7g0252781 | 68.116 | 69 | 22 | 0 | 904 | 972 | 6 | 74 | 1.21e-29 | 113 |
Msa0618050 | MtrunA17_Chr8g0355061 | 74.074 | 54 | 14 | 0 | 817 | 870 | 1 | 54 | 9.65e-23 | 92.4 |
Msa0618050 | MtrunA17_Chr3g0094861 | 41.667 | 60 | 35 | 0 | 8 | 67 | 36 | 95 | 1.40e-11 | 67.0 |
Msa0618050 | MtrunA17_Chr7g0267741 | 40.678 | 59 | 35 | 0 | 1 | 59 | 1 | 59 | 2.86e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0618050 | AT4G18780.1 | 76.730 | 997 | 211 | 8 | 1 | 988 | 1 | 985 | 0.0 | 1578 |
Msa0618050 | AT5G44030.1 | 62.871 | 1045 | 311 | 12 | 6 | 988 | 20 | 1049 | 0.0 | 1340 |
Msa0618050 | AT5G44030.2 | 62.559 | 1063 | 314 | 15 | 6 | 988 | 20 | 1078 | 0.0 | 1333 |
Msa0618050 | AT5G17420.1 | 62.597 | 1032 | 294 | 12 | 8 | 988 | 36 | 1026 | 0.0 | 1311 |
Msa0618050 | AT5G05170.1 | 60.985 | 1056 | 326 | 12 | 9 | 988 | 20 | 1065 | 0.0 | 1305 |
Msa0618050 | AT2G25540.1 | 60.078 | 1027 | 336 | 14 | 8 | 972 | 32 | 1046 | 0.0 | 1269 |
Msa0618050 | AT5G09870.1 | 58.852 | 1045 | 350 | 11 | 9 | 988 | 39 | 1068 | 0.0 | 1266 |
Msa0618050 | AT2G21770.1 | 58.043 | 1063 | 348 | 15 | 9 | 988 | 39 | 1086 | 0.0 | 1265 |
Msa0618050 | AT4G32410.1 | 68.836 | 876 | 235 | 10 | 120 | 972 | 206 | 1066 | 0.0 | 1261 |
Msa0618050 | AT5G64740.1 | 65.389 | 887 | 273 | 10 | 120 | 988 | 213 | 1083 | 0.0 | 1230 |
Msa0618050 | AT4G39350.1 | 65.354 | 889 | 275 | 8 | 105 | 973 | 195 | 1070 | 0.0 | 1214 |
Msa0618050 | AT5G44030.3 | 72.574 | 773 | 165 | 8 | 259 | 988 | 2 | 770 | 0.0 | 1162 |
Msa0618050 | AT3G03050.1 | 43.985 | 1039 | 459 | 22 | 12 | 969 | 135 | 1131 | 0.0 | 849 |
Msa0618050 | AT5G16910.1 | 44.038 | 1040 | 459 | 21 | 12 | 969 | 133 | 1131 | 0.0 | 846 |
Msa0618050 | AT1G02730.1 | 44.671 | 1032 | 451 | 19 | 30 | 975 | 177 | 1174 | 0.0 | 822 |
Msa0618050 | AT4G38190.1 | 43.243 | 1036 | 447 | 22 | 12 | 969 | 120 | 1092 | 0.0 | 816 |
Msa0618050 | AT2G33100.2 | 48.123 | 879 | 349 | 18 | 177 | 969 | 167 | 1024 | 0.0 | 800 |
Msa0618050 | AT2G33100.1 | 48.123 | 879 | 349 | 18 | 177 | 969 | 167 | 1024 | 0.0 | 800 |
Msa0618050 | AT1G32180.1 | 49.482 | 869 | 342 | 18 | 181 | 967 | 113 | 966 | 0.0 | 800 |
Msa0618050 | AT1G32180.2 | 49.482 | 869 | 342 | 18 | 181 | 967 | 113 | 966 | 0.0 | 800 |
Msa0618050 | AT2G32530.1 | 32.412 | 796 | 430 | 18 | 197 | 960 | 24 | 743 | 3.75e-119 | 382 |
Msa0618050 | AT2G32610.1 | 32.000 | 800 | 445 | 21 | 198 | 965 | 25 | 757 | 1.22e-116 | 376 |
Msa0618050 | AT2G32540.1 | 31.877 | 778 | 423 | 18 | 221 | 965 | 50 | 753 | 2.23e-116 | 375 |
Msa0618050 | AT2G32620.1 | 33.597 | 759 | 388 | 22 | 221 | 941 | 50 | 730 | 3.76e-114 | 369 |
Msa0618050 | AT4G15320.3 | 34.653 | 707 | 382 | 19 | 179 | 874 | 6 | 643 | 3.34e-113 | 367 |
Msa0618050 | AT4G15320.5 | 34.653 | 707 | 382 | 19 | 179 | 874 | 6 | 643 | 4.44e-113 | 366 |
Msa0618050 | AT4G15320.4 | 33.934 | 722 | 382 | 20 | 179 | 874 | 6 | 658 | 7.69e-109 | 355 |
Msa0618050 | AT4G15290.1 | 32.705 | 743 | 412 | 18 | 221 | 939 | 50 | 728 | 7.98e-108 | 352 |
Msa0618050 | AT2G32620.3 | 35.458 | 612 | 317 | 15 | 221 | 824 | 50 | 591 | 9.16e-108 | 348 |
Msa0618050 | AT4G15320.2 | 33.688 | 751 | 362 | 22 | 179 | 874 | 6 | 675 | 6.59e-105 | 345 |
Msa0618050 | AT2G32620.4 | 33.475 | 705 | 359 | 21 | 275 | 941 | 2 | 634 | 2.07e-103 | 338 |
Msa0618050 | AT2G32620.2 | 36.553 | 528 | 265 | 12 | 221 | 740 | 50 | 515 | 6.72e-99 | 322 |
Msa0618050 | AT4G15320.1 | 32.030 | 793 | 362 | 24 | 179 | 874 | 6 | 718 | 1.75e-96 | 323 |
Msa0618050 | AT1G55850.1 | 41.253 | 383 | 197 | 9 | 188 | 561 | 28 | 391 | 3.40e-83 | 285 |
Msa0618050 | AT1G55850.1 | 30.154 | 325 | 204 | 5 | 645 | 957 | 406 | 719 | 7.65e-34 | 140 |
Msa0618050 | AT4G24010.1 | 38.609 | 417 | 224 | 10 | 165 | 571 | 1 | 395 | 1.64e-79 | 275 |
Msa0618050 | AT4G24010.1 | 31.164 | 292 | 189 | 4 | 658 | 943 | 419 | 704 | 2.03e-37 | 151 |
Msa0618050 | AT4G23990.1 | 37.379 | 412 | 231 | 9 | 165 | 568 | 20 | 412 | 4.50e-76 | 265 |
Msa0618050 | AT4G23990.1 | 32.646 | 291 | 182 | 5 | 658 | 941 | 438 | 721 | 1.80e-38 | 154 |
Msa0618050 | AT4G24000.1 | 38.677 | 393 | 206 | 11 | 188 | 571 | 19 | 385 | 2.76e-75 | 263 |
Msa0618050 | AT4G24000.1 | 29.747 | 316 | 208 | 6 | 654 | 961 | 405 | 714 | 1.43e-37 | 151 |
Msa0618050 | AT4G24000.2 | 43.781 | 201 | 97 | 6 | 377 | 571 | 3 | 193 | 1.35e-40 | 158 |
Msa0618050 | AT4G24000.2 | 32.090 | 268 | 169 | 4 | 654 | 915 | 213 | 473 | 7.16e-38 | 150 |
Msa0618050 | AT4G23990.2 | 34.470 | 264 | 160 | 4 | 658 | 915 | 224 | 480 | 9.21e-39 | 152 |
Msa0618050 | AT4G23990.2 | 45.732 | 164 | 86 | 3 | 407 | 568 | 36 | 198 | 3.38e-38 | 151 |
Find 259 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCAGATTGGTTGGATTTA+TGG | 0.109971 | 4_2:-68787586 | Msa0618050:intron |
TTTCATTGAATCTGCATTAA+TGG | 0.149187 | 4_2:-68787896 | Msa0618050:CDS |
AAGGTTGCACTTTGTCTTTC+AGG | 0.150719 | 4_2:+68789588 | None:intergenic |
TTCAATCGGCAAGCACTTTA+TGG | 0.171012 | 4_2:-68788225 | Msa0618050:CDS |
CGATTAACTGGAGACCATTT+AGG | 0.191270 | 4_2:+68790121 | None:intergenic |
TAGATTGTTAAGTCACTTAA+AGG | 0.195478 | 4_2:-68786412 | Msa0618050:exon |
GTTGCAAGTATTCTCTTTCT+TGG | 0.205382 | 4_2:-68786980 | Msa0618050:CDS |
CAACAAAAGGTTACCTTCAT+AGG | 0.231318 | 4_2:+68792523 | None:intergenic |
GCACCGGAAGGCATCATATT+TGG | 0.234727 | 4_2:+68792698 | None:intergenic |
CAATGGTAGGAGTGCGGTTT+TGG | 0.244680 | 4_2:+68786546 | None:intergenic |
GTGTTTGTATTGAAGATTTA+TGG | 0.255016 | 4_2:-68786907 | Msa0618050:CDS |
GTTACTGAGGATATCTTAAC+AGG | 0.273691 | 4_2:-68787559 | Msa0618050:CDS |
GGGTTTCTAGAGATGGAAAA+AGG | 0.279513 | 4_2:-68788128 | Msa0618050:CDS |
TGGCTATAGCCCACCTTCTA+TGG | 0.289114 | 4_2:-68788205 | Msa0618050:CDS |
TGCATAGTCCATCCTTCTTC+TGG | 0.289277 | 4_2:+68789345 | None:intergenic |
GGTCAATACCATCAAATCTT+TGG | 0.293893 | 4_2:+68788655 | None:intergenic |
GAAGAAGTAAAAGAAGAATC+TGG | 0.294354 | 4_2:-68791179 | Msa0618050:CDS |
TATGGCGTAATGAGCAGTTT+TGG | 0.294515 | 4_2:-68786889 | Msa0618050:CDS |
TTTCCAATCTTAGTTCAATA+TGG | 0.296677 | 4_2:+68786269 | None:intergenic |
AGAAACCCGTGACACTTCTT+TGG | 0.298881 | 4_2:+68788143 | None:intergenic |
CAAACATCTCTACCAACTTC+TGG | 0.301445 | 4_2:+68788693 | None:intergenic |
GTCAATACCATCAAATCTTT+GGG | 0.311088 | 4_2:+68788656 | None:intergenic |
CATCTATTATATGTGAGATT+TGG | 0.311939 | 4_2:-68790174 | Msa0618050:CDS |
CTGTCAACTTTGTTCACAAA+TGG | 0.316754 | 4_2:+68786464 | None:intergenic |
ACTAGAGGAAGGGATGTAAA+AGG | 0.323968 | 4_2:+68787307 | None:intergenic |
AGTCTTGGGGACCTCTCTTT+GGG | 0.325803 | 4_2:-68786634 | Msa0618050:CDS |
GAGTCTTGGGGACCTCTCTT+TGG | 0.328522 | 4_2:-68786635 | Msa0618050:CDS |
CCCTTTGAATGCAGGCCTTA+AGG | 0.329006 | 4_2:+68787492 | None:intergenic |
CCTTTGAATGCAGGCCTTAA+GGG | 0.330367 | 4_2:+68787493 | None:intergenic |
ATATAAGTGTGTCGATTAAC+TGG | 0.331979 | 4_2:+68790109 | None:intergenic |
AAGAATCTGGGAATTCAAAA+TGG | 0.334423 | 4_2:-68791166 | Msa0618050:CDS |
CTCCCCTCTGCAACATTTGT+GGG | 0.334500 | 4_2:-68792676 | Msa0618050:CDS |
AGTTCTATATGGTGCGAGTT+TGG | 0.336510 | 4_2:+68790285 | None:intergenic |
TTCTTGTGGTGTTGGTATCC+TGG | 0.342322 | 4_2:+68788930 | None:intergenic |
AACATGGTTGGTGTTGTTGC+TGG | 0.349033 | 4_2:-68786686 | Msa0618050:CDS |
CGATCTACTGCATGCCCTTA+AGG | 0.360513 | 4_2:-68787507 | Msa0618050:CDS |
ACAATTATCACAGTTCTATA+TGG | 0.361173 | 4_2:+68790274 | None:intergenic |
TGATCACGTGAGTTATTTCC+AGG | 0.362168 | 4_2:+68789306 | None:intergenic |
TGTTGGATCAGTTCCCTAAA+TGG | 0.367400 | 4_2:-68790135 | Msa0618050:CDS |
TGATCACCCTGGAATGATTC+AGG | 0.367961 | 4_2:-68789289 | Msa0618050:intron |
GATTAACTGGAGACCATTTA+GGG | 0.372794 | 4_2:+68790122 | None:intergenic |
ATGCTGCAATTTATAATCTC+AGG | 0.377395 | 4_2:-68788095 | Msa0618050:CDS |
ATTGATTTCATGTTCAAAAC+AGG | 0.379355 | 4_2:+68792580 | None:intergenic |
CCTGTGAGAAGGCAAATTGC+TGG | 0.381858 | 4_2:+68787268 | None:intergenic |
CAGGATTTGTAACTCGATAA+TGG | 0.386096 | 4_2:+68790224 | None:intergenic |
TCCATTCCTCAAGGGTCTCA+TGG | 0.386149 | 4_2:-68786573 | Msa0618050:CDS |
AATTGTGCGGCTAGTAATCT+TGG | 0.388047 | 4_2:-68790257 | Msa0618050:CDS |
AACTAGTGCTTAGTGAGAAT+GGG | 0.389827 | 4_2:-68792649 | Msa0618050:CDS |
CACCTGCTTTCTTGTGGTGT+TGG | 0.395262 | 4_2:+68788922 | None:intergenic |
GCTGCTGAGGATACCGAGTT+TGG | 0.398636 | 4_2:-68786770 | Msa0618050:CDS |
CATCTGTTTGCTGTGTTCCA+AGG | 0.401270 | 4_2:-68786845 | Msa0618050:CDS |
TAACCATATTGAACTAAGAT+TGG | 0.404025 | 4_2:-68786272 | Msa0618050:three_prime_UTR |
GCTCCCCTCTGCAACATTTG+TGG | 0.406786 | 4_2:-68792677 | Msa0618050:CDS |
CAACTAGTGCTTAGTGAGAA+TGG | 0.407149 | 4_2:-68792650 | Msa0618050:CDS |
CCCCTTTGGTATGCAGTTGG+AGG | 0.409491 | 4_2:-68787382 | Msa0618050:CDS |
CAACCATGTTAATAATGATA+AGG | 0.411803 | 4_2:+68786699 | None:intergenic |
TAATGGAGGATATGAGTCTT+GGG | 0.417584 | 4_2:-68786648 | Msa0618050:CDS |
CAAAACAGGCCTTACACATT+GGG | 0.420161 | 4_2:+68792594 | None:intergenic |
GCCTCCTTGATCAGCATTGA+AGG | 0.422972 | 4_2:+68787841 | None:intergenic |
TCTCAAATGGCTGCAGAGAT+TGG | 0.423335 | 4_2:-68787353 | Msa0618050:CDS |
ATTGGTGAATTGACCATAGA+AGG | 0.424684 | 4_2:+68788192 | None:intergenic |
AGAGGACTTGATGGCATTCA+AGG | 0.425631 | 4_2:-68788276 | Msa0618050:CDS |
GAAAGAGAGGGCGAACCCTC+TGG | 0.427333 | 4_2:-68789878 | Msa0618050:CDS |
ATTGAAGGATCTGCAGATTC+TGG | 0.429155 | 4_2:+68787856 | None:intergenic |
AACCATGTTAATAATGATAA+GGG | 0.430068 | 4_2:+68786700 | None:intergenic |
ACTTCTTCCATCTGCTGCTC+CGG | 0.433153 | 4_2:+68791035 | None:intergenic |
CTCGGTATCCTCAGCAGCCT+TGG | 0.439112 | 4_2:+68786775 | None:intergenic |
GACTCTAGAGAGATATATAT+TGG | 0.440689 | 4_2:-68792725 | Msa0618050:five_prime_UTR |
TAACAAGATACTTTATCTAC+TGG | 0.444449 | 4_2:+68789755 | None:intergenic |
ACAGTGTCCTCACTTGATAT+TGG | 0.444910 | 4_2:-68791287 | Msa0618050:intron |
AGAGGAAAAGCACTTTCAAC+AGG | 0.451203 | 4_2:+68790205 | None:intergenic |
GGACATACCTGAATCATTCC+AGG | 0.451491 | 4_2:+68789282 | None:intergenic |
CTACGTTCCTTCACAAAAGA+AGG | 0.451548 | 4_2:+68789569 | None:intergenic |
TTACCTCAGAGTTGTTGATC+TGG | 0.453554 | 4_2:+68791743 | None:intergenic |
AAGAAGTAAAAGAAGAATCT+GGG | 0.455320 | 4_2:-68791178 | Msa0618050:CDS |
CCAAGGATTTCTTAAGATGT+TGG | 0.457240 | 4_2:-68786828 | Msa0618050:CDS |
CCATTCCTCAAGGGTCTCAT+GGG | 0.459326 | 4_2:-68786572 | Msa0618050:CDS |
TCCTCCAACTGCATACCAAA+GGG | 0.461636 | 4_2:+68787381 | None:intergenic |
GTAAACATGAGAGGACTTGA+TGG | 0.461865 | 4_2:-68788285 | Msa0618050:CDS |
TGAAATCAATGAAGGACATA+AGG | 0.462990 | 4_2:-68792567 | Msa0618050:CDS |
CTTTGGTATGCAGTTGGAGG+AGG | 0.465263 | 4_2:-68787379 | Msa0618050:CDS |
CCCTTAAGGCCTGCATTCAA+AGG | 0.466918 | 4_2:-68787493 | Msa0618050:CDS |
TTAATAATGATAAGGGTTGT+TGG | 0.470001 | 4_2:+68786707 | None:intergenic |
TGTCAACTTTGTTCACAAAT+GGG | 0.473649 | 4_2:+68786465 | None:intergenic |
TTGGGGACCTCTCTTTGGGA+AGG | 0.478690 | 4_2:-68786630 | Msa0618050:CDS |
TTGGAGGAGGCCGTCTCAAA+TGG | 0.478911 | 4_2:-68787366 | Msa0618050:CDS |
GGATTTCTTAAGATGTTGGC+TGG | 0.479449 | 4_2:-68786824 | Msa0618050:CDS |
ATCAATGGTGGTTCTTTCAA+AGG | 0.479467 | 4_2:+68789818 | None:intergenic |
AACCCGTGACACTTCTTTGG+TGG | 0.482334 | 4_2:+68788146 | None:intergenic |
TCGAAGGAAATGAACTTCCT+AGG | 0.482726 | 4_2:-68788980 | Msa0618050:CDS |
ACAATCAAGATTGAGAATGA+AGG | 0.483166 | 4_2:+68788773 | None:intergenic |
TCATCTCTATCCATTCCTCA+AGG | 0.483620 | 4_2:-68786582 | Msa0618050:CDS |
TTTGAACATGAAATCAATGA+AGG | 0.485921 | 4_2:-68792575 | Msa0618050:CDS |
AAGTAATACTCAGGTGCTCT+TGG | 0.487906 | 4_2:+68789629 | None:intergenic |
CCAACATCTTAAGAAATCCT+TGG | 0.488128 | 4_2:+68786828 | None:intergenic |
TGAGAATGGGGAAATGTTTG+TGG | 0.488208 | 4_2:-68792636 | Msa0618050:CDS |
CAAGTCCTTCGATGGGCACT+TGG | 0.493315 | 4_2:-68787436 | Msa0618050:CDS |
CCGTGACACTTCTTTGGTGG+AGG | 0.495706 | 4_2:+68788149 | None:intergenic |
TTAATGGAGGATATGAGTCT+TGG | 0.495754 | 4_2:-68786649 | Msa0618050:CDS |
CTTGGCAGTGACAGTGAAGT+TGG | 0.496366 | 4_2:+68786793 | None:intergenic |
CTTATCATTATTAACATGGT+TGG | 0.497755 | 4_2:-68786698 | Msa0618050:CDS |
GAAGACTGAATGGGGAAAAG+AGG | 0.497940 | 4_2:-68787788 | Msa0618050:intron |
AGATCCTTCAATGCTGATCA+AGG | 0.498517 | 4_2:-68787845 | Msa0618050:CDS |
AGCAGCAGATGGAAGAAGTT+CGG | 0.500141 | 4_2:-68791031 | Msa0618050:intron |
AATAGAATGAAAGGCTGGAA+AGG | 0.501075 | 4_2:-68791140 | Msa0618050:CDS |
CATCTCTATCCATTCCTCAA+GGG | 0.506755 | 4_2:-68786581 | Msa0618050:CDS |
TACCTCAGAGTTGTTGATCT+GGG | 0.507346 | 4_2:+68791744 | None:intergenic |
GCTCACATTTGAATCTCTTG+TGG | 0.509445 | 4_2:-68789708 | Msa0618050:CDS |
CCAGCAATTTGCCTTCTCAC+AGG | 0.510485 | 4_2:-68787268 | Msa0618050:CDS |
TCTTCCATCTGCTGCTCCGG+TGG | 0.510783 | 4_2:+68791038 | None:intergenic |
GTATGAAGAGAAGACTGAAT+GGG | 0.511979 | 4_2:-68787797 | Msa0618050:CDS |
TACAATAAGCAACTAGAGGA+AGG | 0.512008 | 4_2:+68787296 | None:intergenic |
ATAGAATGAAAGGCTGGAAA+GGG | 0.512044 | 4_2:-68791139 | Msa0618050:CDS |
GAACCAAATATGATGCCTTC+CGG | 0.513538 | 4_2:-68792701 | Msa0618050:exon |
CTAGAAACATAAACTAGCCT+AGG | 0.516473 | 4_2:+68788963 | None:intergenic |
CAAGTGTGCTTGAGCTGCGT+TGG | 0.518971 | 4_2:-68786934 | Msa0618050:CDS |
CAAGATGGAACACCTTGGCC+TGG | 0.519011 | 4_2:-68789324 | Msa0618050:CDS |
ATTGTGCGGCTAGTAATCTT+GGG | 0.520101 | 4_2:-68790256 | Msa0618050:CDS |
GTGTAGTTACCCAATGTGTA+AGG | 0.522831 | 4_2:-68792603 | Msa0618050:CDS |
AAAGGGAAAGGGAAAGTGAA+GGG | 0.523087 | 4_2:-68791122 | Msa0618050:CDS |
CCCATGAGACCCTTGAGGAA+TGG | 0.524531 | 4_2:+68786572 | None:intergenic |
CCCACAGCTAATTACATGAA+TGG | 0.524985 | 4_2:+68787819 | None:intergenic |
AAGTGTGGCACTCCCTATGA+AGG | 0.526983 | 4_2:-68792536 | Msa0618050:intron |
CAAGTGCCCATCGAAGGACT+TGG | 0.527403 | 4_2:+68787437 | None:intergenic |
TGAAAGGCTGGAAAGGGAAA+GGG | 0.529591 | 4_2:-68791133 | Msa0618050:CDS |
GAATCTGCATTAATGGAGAA+TGG | 0.529951 | 4_2:-68787889 | Msa0618050:CDS |
TTTCAGCACCTGCTTTCTTG+TGG | 0.530437 | 4_2:+68788916 | None:intergenic |
TCAAGATGCAGTGCCGAGGA+TGG | 0.530653 | 4_2:-68787534 | Msa0618050:CDS |
TCTTGTTATGTGTCAGATGA+TGG | 0.530704 | 4_2:-68789740 | Msa0618050:CDS |
TGCACCTACGGCTGAAAATG+AGG | 0.530832 | 4_2:-68791069 | Msa0618050:CDS |
ATGAAAGGCTGGAAAGGGAA+AGG | 0.532370 | 4_2:-68791134 | Msa0618050:CDS |
CATTCAAGGACCAATGTATG+TGG | 0.535770 | 4_2:-68788262 | Msa0618050:CDS |
GGTGCTGACCCTTTGAATGC+AGG | 0.536470 | 4_2:+68787484 | None:intergenic |
GAAGGAACGTAGAGCAATGA+AGG | 0.539415 | 4_2:-68789558 | Msa0618050:intron |
ATCTGGGAAGCCACTGTGGA+TGG | 0.540167 | 4_2:+68791760 | None:intergenic |
CACCTATCAACTTGTCTGAT+CGG | 0.540320 | 4_2:-68787465 | Msa0618050:CDS |
CTCCTCCAACTGCATACCAA+AGG | 0.542293 | 4_2:+68787380 | None:intergenic |
AACAAAAGGTTACCTTCATA+GGG | 0.544089 | 4_2:+68792524 | None:intergenic |
GTGTCACGGGTTTCTAGAGA+TGG | 0.544263 | 4_2:-68788135 | Msa0618050:CDS |
AATATAAAGTTCACCAAACT+CGG | 0.545632 | 4_2:+68786757 | None:intergenic |
GCATTAATGGAGAATGGAGG+AGG | 0.546724 | 4_2:-68787883 | Msa0618050:CDS |
GCCATTCATGTAATTAGCTG+TGG | 0.547211 | 4_2:-68787820 | Msa0618050:CDS |
CAGCTGAATTTGCAAAGAAG+TGG | 0.548104 | 4_2:-68789682 | Msa0618050:CDS |
AAAGAAAACTGTATTGCGGT+TGG | 0.548349 | 4_2:+68788617 | None:intergenic |
TCAAAACAGGCCTTACACAT+TGG | 0.548986 | 4_2:+68792593 | None:intergenic |
GGTTGCACCAAGTCCTTCGA+TGG | 0.550785 | 4_2:-68787444 | Msa0618050:CDS |
ACTGTATTAGCTGTAATCAA+TGG | 0.551245 | 4_2:+68789803 | None:intergenic |
TACAGTGCTTTCTATCCTTG+CGG | 0.551652 | 4_2:-68789786 | Msa0618050:CDS |
CAATCAAGATTGAGAATGAA+GGG | 0.553115 | 4_2:+68788774 | None:intergenic |
AAATGAGGCTGCAGTTCCAC+CGG | 0.555089 | 4_2:-68791054 | Msa0618050:CDS |
TGCTGCAATTTATAATCTCA+GGG | 0.555560 | 4_2:-68788094 | Msa0618050:CDS |
AGCTGAATTTGCAAAGAAGT+GGG | 0.555678 | 4_2:-68789681 | Msa0618050:CDS |
AGTTAATGCTATGGTAGCTA+AGG | 0.557655 | 4_2:-68789379 | Msa0618050:CDS |
TTTCTCATGGATCCAGAAGT+TGG | 0.558472 | 4_2:-68788705 | Msa0618050:CDS |
CGTGAGTTATTTCCAGGCCA+AGG | 0.560065 | 4_2:+68789312 | None:intergenic |
GACGACGACGATGACATTGT+GGG | 0.560320 | 4_2:-68791793 | Msa0618050:CDS |
CCTTAAGGCCTGCATTCAAA+GGG | 0.561090 | 4_2:-68787492 | Msa0618050:CDS |
CTAGAGGAAGGGATGTAAAA+GGG | 0.561370 | 4_2:+68787308 | None:intergenic |
TACCAACACCACAAGAAAGC+AGG | 0.561373 | 4_2:-68788924 | Msa0618050:CDS |
AATGTTGCAGAGGGGAGCAC+CGG | 0.561788 | 4_2:+68792682 | None:intergenic |
CCATGACAGGTTTGAAAGAG+AGG | 0.562200 | 4_2:-68789891 | Msa0618050:intron |
TTCCCCACAAATGTTGCAGA+GGG | 0.563779 | 4_2:+68792673 | None:intergenic |
AACCCTTATCATTATTAACA+TGG | 0.564229 | 4_2:-68786702 | Msa0618050:CDS |
CTCCTACCATTGTTATTCTG+TGG | 0.564955 | 4_2:-68786535 | Msa0618050:CDS |
AAAGAGAATACTTGCAACGT+TGG | 0.565010 | 4_2:+68786985 | None:intergenic |
GCTCAGAAAACACCAGAAGA+AGG | 0.565164 | 4_2:-68789357 | Msa0618050:CDS |
ATAATGATAAGGGTTGTTGG+TGG | 0.566000 | 4_2:+68786710 | None:intergenic |
GGTATGAAGAGAAGACTGAA+TGG | 0.571053 | 4_2:-68787798 | Msa0618050:CDS |
CGTGACACTTCTTTGGTGGA+GGG | 0.572817 | 4_2:+68788150 | None:intergenic |
ATATCCTCCATTAAGTGCAT+CGG | 0.573078 | 4_2:+68786658 | None:intergenic |
TGGCAGAGCAGCAGCCTCTG+TGG | 0.573569 | 4_2:+68790336 | None:intergenic |
GTGAACTTTATATTATCAAG+TGG | 0.573958 | 4_2:-68786748 | Msa0618050:CDS |
TGTCACTGCCAAGGCTGCTG+AGG | 0.574457 | 4_2:-68786783 | Msa0618050:CDS |
GTTTCTAGAGAGAAAAGACC+AGG | 0.576317 | 4_2:-68788948 | Msa0618050:CDS |
CAACCAGTCCCCACATACAT+TGG | 0.577774 | 4_2:+68788252 | None:intergenic |
CTCCACCAAAGAAGTGTCAC+GGG | 0.580069 | 4_2:-68788148 | Msa0618050:CDS |
AAGGGAAAGGGAAAGTGAAG+GGG | 0.580318 | 4_2:-68791121 | Msa0618050:CDS |
ATCAACAGAAGCAAGTCCAG+AGG | 0.582053 | 4_2:+68789862 | None:intergenic |
AGAAAACACCAGAAGAAGGA+TGG | 0.582354 | 4_2:-68789353 | Msa0618050:CDS |
AGCAGGTGCTGAAAACGCAC+TGG | 0.582622 | 4_2:-68788907 | Msa0618050:intron |
CAGCAACAGCATGAAGACAT+TGG | 0.585064 | 4_2:+68788174 | None:intergenic |
CTGATCCAAGTGCCCATCGA+AGG | 0.585278 | 4_2:+68787431 | None:intergenic |
AACCGATCAGACAAGTTGAT+AGG | 0.587506 | 4_2:+68787463 | None:intergenic |
TCCCCTCTGCAACATTTGTG+GGG | 0.589578 | 4_2:-68792675 | Msa0618050:CDS |
TTGCAGAGGGGAGCACCGGA+AGG | 0.590831 | 4_2:+68792686 | None:intergenic |
GAAGGATGGACTATGCAAGA+TGG | 0.593920 | 4_2:-68789339 | Msa0618050:CDS |
CGACGACGACGATGACATTG+TGG | 0.596876 | 4_2:-68791794 | Msa0618050:CDS |
CCTCCACCAAAGAAGTGTCA+CGG | 0.597661 | 4_2:-68788149 | Msa0618050:CDS |
CACGAGCACCACTGTGTCCG+AGG | 0.598658 | 4_2:+68789006 | None:intergenic |
ATTGGCATAAGTACTGAAAG+TGG | 0.599258 | 4_2:+68790316 | None:intergenic |
AGTAGATCGACCTCCATCCT+CGG | 0.599543 | 4_2:+68787521 | None:intergenic |
CAACTTCACTGTCACTGCCA+AGG | 0.599896 | 4_2:-68786792 | Msa0618050:CDS |
AGTTCCACCGGAGCAGCAGA+TGG | 0.600455 | 4_2:-68791042 | Msa0618050:CDS |
ATTCAAGGACCAATGTATGT+GGG | 0.601446 | 4_2:-68788261 | Msa0618050:CDS |
CAGATTATGATGAGAATGAG+AGG | 0.602852 | 4_2:-68787972 | Msa0618050:CDS |
GATTTATGGTTCAGTTACTG+AGG | 0.604398 | 4_2:-68787572 | Msa0618050:CDS |
TAAAGTACGAGTTAATGCTA+TGG | 0.607511 | 4_2:-68789388 | Msa0618050:CDS |
ACAATAAGCAACTAGAGGAA+GGG | 0.607693 | 4_2:+68787297 | None:intergenic |
GCTATGACTCACACAAGCAA+TGG | 0.608359 | 4_2:+68786325 | None:intergenic |
GTGCTTGAGCTGCGTTGGAG+TGG | 0.608668 | 4_2:-68786929 | Msa0618050:CDS |
AGGAAAATTTATCATACCAA+CGG | 0.611786 | 4_2:-68787248 | Msa0618050:intron |
CTCCAACTGCATACCAAAGG+GGG | 0.614445 | 4_2:+68787383 | None:intergenic |
ACTAGTGCTTAGTGAGAATG+GGG | 0.616638 | 4_2:-68792648 | Msa0618050:CDS |
CATTAATGGAGAATGGAGGA+GGG | 0.618802 | 4_2:-68787882 | Msa0618050:CDS |
CATGACAGGTTTGAAAGAGA+GGG | 0.620048 | 4_2:-68789890 | Msa0618050:intron |
AAGAAAACCTTCCCAAAGAG+AGG | 0.621369 | 4_2:+68786623 | None:intergenic |
CCATTCATGTAATTAGCTGT+GGG | 0.621369 | 4_2:-68787819 | Msa0618050:CDS |
GTATTAGCTGTAATCAATGG+TGG | 0.622762 | 4_2:+68789806 | None:intergenic |
CATCAAAGAAAACTGTATTG+CGG | 0.622876 | 4_2:+68788613 | None:intergenic |
CATAAGGTTTGTCTTAAGTG+TGG | 0.623713 | 4_2:-68792551 | Msa0618050:CDS |
GGACCAATGTATGTGGGGAC+TGG | 0.623835 | 4_2:-68788255 | Msa0618050:CDS |
ATCTCTGCAGCCATTTGAGA+CGG | 0.626492 | 4_2:+68787356 | None:intergenic |
GTGACACTTCTTTGGTGGAG+GGG | 0.626766 | 4_2:+68788151 | None:intergenic |
TCAACAGAAGCAAGTCCAGA+GGG | 0.627318 | 4_2:+68789863 | None:intergenic |
AGATGCAGTGCCGAGGATGG+AGG | 0.627594 | 4_2:-68787531 | Msa0618050:CDS |
GGTGAATTGACCATAGAAGG+TGG | 0.629763 | 4_2:+68788195 | None:intergenic |
GTTCCCCACAAATGTTGCAG+AGG | 0.632384 | 4_2:+68792672 | None:intergenic |
AAAGTACAATAAGCAACTAG+AGG | 0.635136 | 4_2:+68787292 | None:intergenic |
GAAAGGGAAAGGGAAAGTGA+AGG | 0.635811 | 4_2:-68791123 | Msa0618050:CDS |
GTGAATTGACCATAGAAGGT+GGG | 0.638011 | 4_2:+68788196 | None:intergenic |
GACATACCTGAATCATTCCA+GGG | 0.638032 | 4_2:+68789283 | None:intergenic |
TATGAAGAGAAGACTGAATG+GGG | 0.639341 | 4_2:-68787796 | Msa0618050:CDS |
CACTGACCACAGAATAACAA+TGG | 0.639829 | 4_2:+68786529 | None:intergenic |
GACCACAGAATAACAATGGT+AGG | 0.639862 | 4_2:+68786533 | None:intergenic |
AATAACTCACGTGATCACCC+TGG | 0.640021 | 4_2:-68789300 | Msa0618050:CDS |
GTTGCACCAAGTCCTTCGAT+GGG | 0.642599 | 4_2:-68787443 | Msa0618050:CDS |
GGGTTCAAGATGCAGTGCCG+AGG | 0.643550 | 4_2:-68787538 | Msa0618050:CDS |
TTCAAGGACCAATGTATGTG+GGG | 0.644219 | 4_2:-68788260 | Msa0618050:CDS |
TGTGTGTTTACCTTGCAGAG+AGG | 0.644684 | 4_2:+68790080 | None:intergenic |
GGCGCCCCATGAGACCCTTG+AGG | 0.652355 | 4_2:+68786567 | None:intergenic |
ATATTGAGAACCTCTCTGCA+AGG | 0.653052 | 4_2:-68790090 | Msa0618050:intron |
GGATGTAAAAGGGTAAACAA+TGG | 0.653330 | 4_2:+68787318 | None:intergenic |
ACATTTCAGGTAAACATGAG+AGG | 0.655980 | 4_2:-68788294 | Msa0618050:intron |
TCAATACCATCAAATCTTTG+GGG | 0.660171 | 4_2:+68788657 | None:intergenic |
ATTAATGGAGAATGGAGGAG+GGG | 0.661803 | 4_2:-68787881 | Msa0618050:CDS |
CTATGCAAGATGGAACACCT+TGG | 0.664296 | 4_2:-68789329 | Msa0618050:CDS |
AATGGAGGATATGAGTCTTG+GGG | 0.665353 | 4_2:-68786647 | Msa0618050:CDS |
TCATTTACCAATATCAAGTG+AGG | 0.666673 | 4_2:+68791280 | None:intergenic |
AGTGGTGCTCGTGATATCGA+AGG | 0.668614 | 4_2:-68788996 | Msa0618050:CDS |
CCAAATAATAGAAAAGACAG+AGG | 0.671610 | 4_2:+68786499 | None:intergenic |
CATTCCTCAAGGGTCTCATG+GGG | 0.676509 | 4_2:-68786571 | Msa0618050:CDS |
ATAGAACTGTGATAATTGTG+CGG | 0.677411 | 4_2:-68790270 | Msa0618050:CDS |
CTACTGGATAGTCAACCGCA+AGG | 0.684409 | 4_2:+68789771 | None:intergenic |
TCATTATGTTAACAACAGCA+AGG | 0.685243 | 4_2:-68788748 | Msa0618050:CDS |
TCCTTCAATGCTGATCAAGG+AGG | 0.688602 | 4_2:-68787842 | Msa0618050:CDS |
TCTGCATTAATGGAGAATGG+AGG | 0.692900 | 4_2:-68787886 | Msa0618050:CDS |
CAATACCATCAAATCTTTGG+GGG | 0.694121 | 4_2:+68788658 | None:intergenic |
CCTCCAACTGCATACCAAAG+GGG | 0.695185 | 4_2:+68787382 | None:intergenic |
TTCCCAGATCAACAACTCTG+AGG | 0.695519 | 4_2:-68791746 | Msa0618050:intron |
TGTGTGAGTCATAGCTCATG+AGG | 0.697449 | 4_2:-68786317 | Msa0618050:three_prime_UTR |
GAATAACAATGGTAGGAGTG+CGG | 0.700382 | 4_2:+68786540 | None:intergenic |
TTACTGAGGATATCTTAACA+GGG | 0.703675 | 4_2:-68787558 | Msa0618050:CDS |
GTTGATCTGGGAAGCCACTG+TGG | 0.708480 | 4_2:+68791756 | None:intergenic |
GGTTGGCATATCGATCACTA+CGG | 0.714474 | 4_2:+68788634 | None:intergenic |
AGGGAACTGATCCAACACCC+AGG | 0.730070 | 4_2:+68790141 | None:intergenic |
TCCCCACAAATGTTGCAGAG+GGG | 0.730305 | 4_2:+68792674 | None:intergenic |
TCTGCTTTGCAGGTCCACAG+AGG | 0.736793 | 4_2:-68790350 | Msa0618050:intron |
TCATGAAAATCCATCCACAG+TGG | 0.765231 | 4_2:-68791770 | Msa0618050:CDS |
ATAATAGATGTCAACCACAG+AGG | 0.765443 | 4_2:+68790187 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTTAATGAATATAAGA+TGG | + | chr4_2:68786705-68786724 | None:intergenic | 10.0% |
!!! | TTTTTAATTATTTCTATGAT+CGG | + | chr4_2:68786844-68786863 | None:intergenic | 10.0% |
!! | TCATTTATAATTTAACTAAT+TGG | - | chr4_2:68789471-68789490 | Msa0618050:intron | 10.0% |
!! | TAATTAAAAGACTATAAAAT+GGG | + | chr4_2:68790666-68790685 | None:intergenic | 10.0% |
!! | ATAATTAAAAGACTATAAAA+TGG | + | chr4_2:68790667-68790686 | None:intergenic | 10.0% |
!! | TTTGTGTTTATTTATATATG+TGG | - | chr4_2:68786515-68786534 | Msa0618050:CDS | 15.0% |
!! | TTGTGTTTATTTATATATGT+GGG | - | chr4_2:68786516-68786535 | Msa0618050:CDS | 15.0% |
!!! | TTTTTGACAAATTTTCATAT+TGG | + | chr4_2:68786664-68786683 | None:intergenic | 15.0% |
!!! | TAAACATGCATTTTTTTTTT+AGG | - | chr4_2:68786752-68786771 | Msa0618050:CDS | 15.0% |
!!! | AAACATGCATTTTTTTTTTA+GGG | - | chr4_2:68786753-68786772 | Msa0618050:CDS | 15.0% |
!!! | TTTTAATTATTTCTATGATC+GGG | + | chr4_2:68786843-68786862 | None:intergenic | 15.0% |
!!! | TATTATTATTGTTAACTTGT+TGG | - | chr4_2:68787605-68787624 | Msa0618050:intron | 15.0% |
!!! | AAATAGTAAAAGTTCATTTT+TGG | + | chr4_2:68788384-68788403 | None:intergenic | 15.0% |
!!! | ACACAAAGTTTTAAAATATT+TGG | - | chr4_2:68788921-68788940 | Msa0618050:CDS | 15.0% |
!! | AATTAAAAGACTATAAAATG+GGG | + | chr4_2:68790665-68790684 | None:intergenic | 15.0% |
!!! | CAAACTAAATTATATTTTAC+AGG | + | chr4_2:68791857-68791876 | None:intergenic | 15.0% |
!! | AATATAATGTACACAACAAA+AGG | + | chr4_2:68786476-68786495 | None:intergenic | 20.0% |
!! | ATAACATGTAGATTGAAATT+AGG | + | chr4_2:68786562-68786581 | None:intergenic | 20.0% |
!! | TAATTTCAATCTACATGTTA+TGG | - | chr4_2:68786561-68786580 | Msa0618050:CDS | 20.0% |
!! | AAAAAAATGCATGTTTAACA+AGG | + | chr4_2:68786749-68786768 | None:intergenic | 20.0% |
!!! | AACATGCATTTTTTTTTTAG+GGG | - | chr4_2:68786754-68786773 | Msa0618050:CDS | 20.0% |
!! | CTCAAAATTCCTATAATTTA+CGG | + | chr4_2:68787273-68787292 | None:intergenic | 20.0% |
!! | AAATGGAAAAATAGAATGAA+AGG | - | chr4_2:68787834-68787853 | Msa0618050:CDS | 20.0% |
!! | TAAAAAGAACAAGACTAAAA+AGG | - | chr4_2:68787890-68787909 | Msa0618050:CDS | 20.0% |
!!! | ATTGAAAACTTTTTGCAAAA+CGG | + | chr4_2:68789330-68789349 | None:intergenic | 20.0% |
!! | AATGTATAAATTACTTTGAG+TGG | - | chr4_2:68789783-68789802 | Msa0618050:CDS | 20.0% |
!! | TATCAAAGATTAAAATCAGA+TGG | - | chr4_2:68789811-68789830 | Msa0618050:CDS | 20.0% |
!! | TTTCAAAAAAAATATCTTCC+AGG | - | chr4_2:68789950-68789969 | Msa0618050:intron | 20.0% |
!!! | TTTTCTTTGATGTAAGTTTA+TGG | - | chr4_2:68790381-68790400 | Msa0618050:intron | 20.0% |
!! | CATACAAAATGTAATAGAAT+TGG | + | chr4_2:68790522-68790541 | None:intergenic | 20.0% |
!!! | CTTTTAATTATACACATTTC+AGG | - | chr4_2:68790676-68790695 | Msa0618050:intron | 20.0% |
!! | ATATCATTACAAAAGAGAAA+AGG | + | chr4_2:68791274-68791293 | None:intergenic | 20.0% |
!!! | TCTCCTAATCTTTATTTTTT+TGG | - | chr4_2:68791761-68791780 | Msa0618050:CDS | 20.0% |
!! | AGACCAAAAAAATAAAGATT+AGG | + | chr4_2:68791767-68791786 | None:intergenic | 20.0% |
!! | ACAATTATTAGATAATCCAT+GGG | + | chr4_2:68791834-68791853 | None:intergenic | 20.0% |
!! | AACCATGTTAATAATGATAA+GGG | + | chr4_2:68792286-68792305 | None:intergenic | 20.0% |
!! | TATATATTTCCAAAAACTCT+TGG | + | chr4_2:68792604-68792623 | None:intergenic | 20.0% |
!! | ATTGATTTCATGTTCAAAAC+AGG | + | chr4_2:68786406-68786425 | None:intergenic | 25.0% |
! | TTTGAACATGAAATCAATGA+AGG | - | chr4_2:68786408-68786427 | Msa0618050:exon | 25.0% |
!!! | CAAGGAATTTTTCTTATTTG+TGG | + | chr4_2:68786731-68786750 | None:intergenic | 25.0% |
!! | ACATGTTGATTATCACAATT+GGG | + | chr4_2:68786953-68786972 | None:intergenic | 25.0% |
!! | AACATGTTGATTATCACAAT+TGG | + | chr4_2:68786954-68786973 | None:intergenic | 25.0% |
! | AAAGAACTGTATATTTGTGT+AGG | - | chr4_2:68787133-68787152 | Msa0618050:intron | 25.0% |
! | AAGAACTGTATATTTGTGTA+GGG | - | chr4_2:68787134-68787153 | Msa0618050:intron | 25.0% |
! | AATGTGTTACCGTAAATTAT+AGG | - | chr4_2:68787261-68787280 | Msa0618050:CDS | 25.0% |
!! | GAAATGAGAAATCTGAAATT+AGG | - | chr4_2:68787294-68787313 | Msa0618050:CDS | 25.0% |
!! | ATTGTTTTCATAAGCTATCT+TGG | - | chr4_2:68787443-68787462 | Msa0618050:CDS | 25.0% |
!! | AGAGTCTAGATCATATATTT+TGG | - | chr4_2:68787729-68787748 | Msa0618050:intron | 25.0% |
! | AATCTTTGATCGTAACAATA+TGG | - | chr4_2:68787770-68787789 | Msa0618050:intron | 25.0% |
! | AAGAAGTAAAAGAAGAATCT+GGG | - | chr4_2:68787805-68787824 | Msa0618050:CDS | 25.0% |
! | AGCTTATAAGTATGTAAGAA+TGG | + | chr4_2:68788226-68788245 | None:intergenic | 25.0% |
! | ATTCTTACATACTTATAAGC+TGG | - | chr4_2:68788225-68788244 | Msa0618050:CDS | 25.0% |
! | TTTGTGAAAAAGAAAATCTC+TGG | + | chr4_2:68788300-68788319 | None:intergenic | 25.0% |
!!! | TGAAATTGTTTTAAACCATC+AGG | - | chr4_2:68788503-68788522 | Msa0618050:intron | 25.0% |
! | ACAATTATCACAGTTCTATA+TGG | + | chr4_2:68788712-68788731 | None:intergenic | 25.0% |
! | CATCTATTATATGTGAGATT+TGG | - | chr4_2:68788809-68788828 | Msa0618050:intron | 25.0% |
! | ATATATTGTAGAATGAGTGA+AGG | - | chr4_2:68788982-68789001 | Msa0618050:CDS | 25.0% |
! | TAACAAGATACTTTATCTAC+TGG | + | chr4_2:68789231-68789250 | None:intergenic | 25.0% |
! | AACTAATAACTACTTCAGTT+TGG | + | chr4_2:68789501-68789520 | None:intergenic | 25.0% |
! | TTGATTGCATACAGAAATAA+TGG | + | chr4_2:68789725-68789744 | None:intergenic | 25.0% |
! | CCTTATATGAAACATTATTG+AGG | + | chr4_2:68790114-68790133 | None:intergenic | 25.0% |
! | CCTCAATAATGTTTCATATA+AGG | - | chr4_2:68790111-68790130 | Msa0618050:CDS | 25.0% |
! | TATAATGCTTGATGTTTGTA+TGG | - | chr4_2:68790146-68790165 | Msa0618050:CDS | 25.0% |
!!! | ATGAGCTTTGAAAAAACTTT+TGG | - | chr4_2:68791052-68791071 | Msa0618050:CDS | 25.0% |
! | TTTCATTGAATCTGCATTAA+TGG | - | chr4_2:68791087-68791106 | Msa0618050:CDS | 25.0% |
! | AGGAAACGATAATTTAAAGA+TGG | + | chr4_2:68791254-68791273 | None:intergenic | 25.0% |
!!! | AGTGGAATTTTAACTGTTAT+AGG | + | chr4_2:68791310-68791329 | None:intergenic | 25.0% |
! | ATCTGAAAAGACAAGAAAAT+AGG | + | chr4_2:68791385-68791404 | None:intergenic | 25.0% |
!! | ATTTTCTTGTCTTTTCAGAT+TGG | - | chr4_2:68791385-68791404 | Msa0618050:intron | 25.0% |
! | AGGAAAATTTATCATACCAA+CGG | - | chr4_2:68791735-68791754 | Msa0618050:intron | 25.0% |
! | CAATTATTAGATAATCCATG+GGG | + | chr4_2:68791833-68791852 | None:intergenic | 25.0% |
! | GACAATTATTAGATAATCCA+TGG | + | chr4_2:68791835-68791854 | None:intergenic | 25.0% |
! | CAACCAAGAAAATCATTTAT+AGG | - | chr4_2:68791891-68791910 | Msa0618050:intron | 25.0% |
!! | AAGCCTATAAATGATTTTCT+TGG | + | chr4_2:68791897-68791916 | None:intergenic | 25.0% |
! | GTGTTTGTATTGAAGATTTA+TGG | - | chr4_2:68792076-68792095 | Msa0618050:intron | 25.0% |
! | AATATAAAGTTCACCAAACT+CGG | + | chr4_2:68792229-68792248 | None:intergenic | 25.0% |
! | GTGAACTTTATATTATCAAG+TGG | - | chr4_2:68792235-68792254 | Msa0618050:intron | 25.0% |
! | TTAATAATGATAAGGGTTGT+TGG | + | chr4_2:68792279-68792298 | None:intergenic | 25.0% |
! | AACCCTTATCATTATTAACA+TGG | - | chr4_2:68792281-68792300 | Msa0618050:intron | 25.0% |
! | CAACCATGTTAATAATGATA+AGG | + | chr4_2:68792287-68792306 | None:intergenic | 25.0% |
! | CTTATCATTATTAACATGGT+TGG | - | chr4_2:68792285-68792304 | Msa0618050:intron | 25.0% |
!! | CTCTGTCTTTTCTATTATTT+GGG | - | chr4_2:68792485-68792504 | Msa0618050:intron | 25.0% |
! | TAGATTGTTAAGTCACTTAA+AGG | - | chr4_2:68792571-68792590 | Msa0618050:CDS | 25.0% |
! | TATGTAAAAAGATGCATACA+TGG | - | chr4_2:68792622-68792641 | Msa0618050:CDS | 25.0% |
! | TAACCATATTGAACTAAGAT+TGG | - | chr4_2:68792711-68792730 | Msa0618050:exon | 25.0% |
! | TTTCCAATCTTAGTTCAATA+TGG | + | chr4_2:68792717-68792736 | None:intergenic | 25.0% |
! | GACTCTAGAGAGATATATAT+TGG | - | chr4_2:68786258-68786277 | Msa0618050:three_prime_UTR | 30.0% |
TGAAATCAATGAAGGACATA+AGG | - | chr4_2:68786416-68786435 | Msa0618050:exon | 30.0% | |
AACAAAAGGTTACCTTCATA+GGG | + | chr4_2:68786462-68786481 | None:intergenic | 30.0% | |
!! | AATTATTTCTATGATCGGGT+GGG | + | chr4_2:68786839-68786858 | None:intergenic | 30.0% |
!! | TAATTATTTCTATGATCGGG+TGG | + | chr4_2:68786840-68786859 | None:intergenic | 30.0% |
! | TTTGGATTTTGGATTTCAAC+AGG | + | chr4_2:68787057-68787076 | None:intergenic | 30.0% |
! | ATCTGAAATTAGGCAATGTT+TGG | - | chr4_2:68787304-68787323 | Msa0618050:CDS | 30.0% |
! | AAACATACTAAGAGCATGTT+TGG | + | chr4_2:68787586-68787605 | None:intergenic | 30.0% |
! | AACCACATCTTGAATTTTGT+AGG | - | chr4_2:68787641-68787660 | Msa0618050:intron | 30.0% |
ATCCTACAAAATTCAAGATG+TGG | + | chr4_2:68787646-68787665 | None:intergenic | 30.0% | |
! | TCTTGAATTTTGTAGGATGT+TGG | - | chr4_2:68787648-68787667 | Msa0618050:intron | 30.0% |
TCATTTACCAATATCAAGTG+AGG | + | chr4_2:68787706-68787725 | None:intergenic | 30.0% | |
GAAGAAGTAAAAGAAGAATC+TGG | - | chr4_2:68787804-68787823 | Msa0618050:CDS | 30.0% | |
AAGAATCTGGGAATTCAAAA+TGG | - | chr4_2:68787817-68787836 | Msa0618050:CDS | 30.0% | |
ATGAAATAGAGTTCCTCAAA+TGG | - | chr4_2:68787990-68788009 | Msa0618050:intron | 30.0% | |
AAAAGTTTCAGACCTTAATC+AGG | - | chr4_2:68788056-68788075 | Msa0618050:intron | 30.0% | |
TCTTAATGCTAACCTGATTA+AGG | + | chr4_2:68788071-68788090 | None:intergenic | 30.0% | |
ACAAATGTAATTGTCTGAAG+CGG | - | chr4_2:68788315-68788334 | Msa0618050:intron | 30.0% | |
CATATTCCGAATAAAATCGA+CGG | + | chr4_2:68788543-68788562 | None:intergenic | 30.0% | |
ATAGAACTGTGATAATTGTG+CGG | - | chr4_2:68788713-68788732 | Msa0618050:CDS | 30.0% | |
!! | ATATAAGTGTGTCGATTAAC+TGG | + | chr4_2:68788877-68788896 | None:intergenic | 30.0% |
TTCTATATTTATGCCATGAC+AGG | - | chr4_2:68789079-68789098 | Msa0618050:intron | 30.0% | |
ACTGTATTAGCTGTAATCAA+TGG | + | chr4_2:68789183-68789202 | None:intergenic | 30.0% | |
!! | TTTTGAGAGAAGTAATACTC+AGG | + | chr4_2:68789366-68789385 | None:intergenic | 30.0% |
TAAAGTACGAGTTAATGCTA+TGG | - | chr4_2:68789595-68789614 | Msa0618050:CDS | 30.0% | |
TGTTCACAAGATTGATTGAT+TGG | - | chr4_2:68789844-68789863 | Msa0618050:CDS | 30.0% | |
ATGTGACAATAGTTGAGTAA+TGG | + | chr4_2:68789872-68789891 | None:intergenic | 30.0% | |
ATGTTTGTATGGATTTATCC+AGG | - | chr4_2:68790157-68790176 | Msa0618050:CDS | 30.0% | |
CAATCAAGATTGAGAATGAA+GGG | + | chr4_2:68790212-68790231 | None:intergenic | 30.0% | |
ACAATCAAGATTGAGAATGA+AGG | + | chr4_2:68790213-68790232 | None:intergenic | 30.0% | |
TCAATACCATCAAATCTTTG+GGG | + | chr4_2:68790329-68790348 | None:intergenic | 30.0% | |
GTCAATACCATCAAATCTTT+GGG | + | chr4_2:68790330-68790349 | None:intergenic | 30.0% | |
CATCAAAGAAAACTGTATTG+CGG | + | chr4_2:68790373-68790392 | None:intergenic | 30.0% | |
!! | CAAAGCATCATTTTCTTATG+TGG | - | chr4_2:68790404-68790423 | Msa0618050:intron | 30.0% |
AAGAAATGCTCTTAGTTTCA+AGG | - | chr4_2:68790457-68790476 | Msa0618050:intron | 30.0% | |
TTGCTTACGATGAGATAATA+TGG | + | chr4_2:68790553-68790572 | None:intergenic | 30.0% | |
ATGCTGCAATTTATAATCTC+AGG | - | chr4_2:68790888-68790907 | Msa0618050:intron | 30.0% | |
TGCTGCAATTTATAATCTCA+GGG | - | chr4_2:68790889-68790908 | Msa0618050:intron | 30.0% | |
AACAGTTAAAATTCCACTTG+AGG | - | chr4_2:68791312-68791331 | Msa0618050:CDS | 30.0% | |
! | TTTCAGATTGGTTGGATTTA+TGG | - | chr4_2:68791397-68791416 | Msa0618050:intron | 30.0% |
TTACTGAGGATATCTTAACA+GGG | - | chr4_2:68791425-68791444 | Msa0618050:intron | 30.0% | |
AAAGTACAATAAGCAACTAG+AGG | + | chr4_2:68791694-68791713 | None:intergenic | 30.0% | |
! | TGATAAATTTTCCTGTGAGA+AGG | + | chr4_2:68791729-68791748 | None:intergenic | 30.0% |
CCAAATAATAGAAAAGACAG+AGG | + | chr4_2:68792487-68792506 | None:intergenic | 30.0% | |
! | CCTCTGTCTTTTCTATTATT+TGG | - | chr4_2:68792484-68792503 | Msa0618050:intron | 30.0% |
TGTCAACTTTGTTCACAAAT+GGG | + | chr4_2:68792521-68792540 | None:intergenic | 30.0% | |
AACTAGTGCTTAGTGAGAAT+GGG | - | chr4_2:68786334-68786353 | Msa0618050:three_prime_UTR | 35.0% | |
CATAAGGTTTGTCTTAAGTG+TGG | - | chr4_2:68786432-68786451 | Msa0618050:CDS | 35.0% | |
CAACAAAAGGTTACCTTCAT+AGG | + | chr4_2:68786463-68786482 | None:intergenic | 35.0% | |
TGTTCTCAACATACTTCGAA+TGG | - | chr4_2:68786789-68786808 | Msa0618050:CDS | 35.0% | |
GTTCTCAACATACTTCGAAT+GGG | - | chr4_2:68786790-68786809 | Msa0618050:CDS | 35.0% | |
AAAAAAAAAAACGCCGTTGC+CGG | - | chr4_2:68786868-68786887 | Msa0618050:CDS | 35.0% | |
! | TGAATTTTGTAGGATGTTGG+AGG | - | chr4_2:68787651-68787670 | Msa0618050:intron | 35.0% |
GGAAAAATAGAATGAAAGGC+TGG | - | chr4_2:68787838-68787857 | Msa0618050:CDS | 35.0% | |
AATAGAATGAAAGGCTGGAA+AGG | - | chr4_2:68787843-68787862 | Msa0618050:CDS | 35.0% | |
ATAGAATGAAAGGCTGGAAA+GGG | - | chr4_2:68787844-68787863 | Msa0618050:CDS | 35.0% | |
!! | GTTTGGTTTGATACATTGAG+TGG | - | chr4_2:68788154-68788173 | Msa0618050:CDS | 35.0% |
!!! | CTGCTTTTTCATCTCTTAGT+AGG | + | chr4_2:68788276-68788295 | None:intergenic | 35.0% |
TTGGCACACATAAAGACTAA+AGG | + | chr4_2:68788365-68788384 | None:intergenic | 35.0% | |
ATTCTCTATACTGTGGAAGA+TGG | + | chr4_2:68788416-68788435 | None:intergenic | 35.0% | |
GTTTGCAATTCTCTATACTG+TGG | + | chr4_2:68788423-68788442 | None:intergenic | 35.0% | |
!!! | GAAAGACCGTCGATTTTATT+CGG | - | chr4_2:68788534-68788553 | Msa0618050:intron | 35.0% |
!! | ATTGGCATAAGTACTGAAAG+TGG | + | chr4_2:68788670-68788689 | None:intergenic | 35.0% |
! | GCGAGTTTGGATTTTACTAT+TGG | + | chr4_2:68788688-68788707 | None:intergenic | 35.0% |
CAGGATTTGTAACTCGATAA+TGG | + | chr4_2:68788762-68788781 | None:intergenic | 35.0% | |
ATAATAGATGTCAACCACAG+AGG | + | chr4_2:68788799-68788818 | None:intergenic | 35.0% | |
!!! | AGATTTGGTTTGCATTTTCC+TGG | - | chr4_2:68788824-68788843 | Msa0618050:intron | 35.0% |
!!! | GATTTGGTTTGCATTTTCCT+GGG | - | chr4_2:68788825-68788844 | Msa0618050:intron | 35.0% |
GATTAACTGGAGACCATTTA+GGG | + | chr4_2:68788864-68788883 | None:intergenic | 35.0% | |
TGCTTAAAGAACAACGCATA+AGG | + | chr4_2:68788949-68788968 | None:intergenic | 35.0% | |
GTTGTTCTTTAAGCATGACT+TGG | - | chr4_2:68788954-68788973 | Msa0618050:CDS | 35.0% | |
AGAATGAGTGAAGGTTAACA+TGG | - | chr4_2:68788991-68789010 | Msa0618050:CDS | 35.0% | |
ATCAATGGTGGTTCTTTCAA+AGG | + | chr4_2:68789168-68789187 | None:intergenic | 35.0% | |
GTATTAGCTGTAATCAATGG+TGG | + | chr4_2:68789180-68789199 | None:intergenic | 35.0% | |
! | TCTTGTTATGTGTCAGATGA+TGG | - | chr4_2:68789243-68789262 | Msa0618050:intron | 35.0% |
AGCTGAATTTGCAAAGAAGT+GGG | - | chr4_2:68789302-68789321 | Msa0618050:CDS | 35.0% | |
TTCTCTCTGACAGAATTGAA+AGG | + | chr4_2:68789564-68789583 | None:intergenic | 35.0% | |
AGTTAATGCTATGGTAGCTA+AGG | - | chr4_2:68789604-68789623 | Msa0618050:CDS | 35.0% | |
GCATAATTGCTGATCATGAT+AGG | - | chr4_2:68789753-68789772 | Msa0618050:CDS | 35.0% | |
CTCAGACTTTGCAAAGAATA+AGG | + | chr4_2:68789929-68789948 | None:intergenic | 35.0% | |
! | AATATCTTCCAGGTTTTCCT+CGG | - | chr4_2:68789960-68789979 | Msa0618050:intron | 35.0% |
! | CTAGAAACATAAACTAGCCT+AGG | + | chr4_2:68790023-68790042 | None:intergenic | 35.0% |
! | AGAAGCAATGTGTTTTCTCA+TGG | - | chr4_2:68790265-68790284 | Msa0618050:CDS | 35.0% |
CAATACCATCAAATCTTTGG+GGG | + | chr4_2:68790328-68790347 | None:intergenic | 35.0% | |
GGTCAATACCATCAAATCTT+TGG | + | chr4_2:68790331-68790350 | None:intergenic | 35.0% | |
AAAGAAAACTGTATTGCGGT+TGG | + | chr4_2:68790369-68790388 | None:intergenic | 35.0% | |
GACTATAAAATGGGGAAGAT+TGG | + | chr4_2:68790657-68790676 | None:intergenic | 35.0% | |
! | ACATTTCAGGTAAACATGAG+AGG | - | chr4_2:68790689-68790708 | Msa0618050:intron | 35.0% |
ATTCAAGGACCAATGTATGT+GGG | - | chr4_2:68790722-68790741 | Msa0618050:intron | 35.0% | |
ATTGGTGAATTGACCATAGA+AGG | + | chr4_2:68790794-68790813 | None:intergenic | 35.0% | |
! | GGTTTCTAGAGATGGAAAAA+GGG | - | chr4_2:68790856-68790875 | Msa0618050:intron | 35.0% |
CACGCTTATCTGAAAATGAT+AGG | + | chr4_2:68790943-68790962 | None:intergenic | 35.0% | |
TTCAAACTGTAACATTCTCC+TGG | - | chr4_2:68790973-68790992 | Msa0618050:intron | 35.0% | |
TCATTCTCATCATAATCTGC+AGG | + | chr4_2:68791010-68791029 | None:intergenic | 35.0% | |
CAGATTATGATGAGAATGAG+AGG | - | chr4_2:68791011-68791030 | Msa0618050:intron | 35.0% | |
GAATCTGCATTAATGGAGAA+TGG | - | chr4_2:68791094-68791113 | Msa0618050:CDS | 35.0% | |
CCATTCATGTAATTAGCTGT+GGG | - | chr4_2:68791164-68791183 | Msa0618050:CDS | 35.0% | |
GTATGAAGAGAAGACTGAAT+GGG | - | chr4_2:68791186-68791205 | Msa0618050:intron | 35.0% | |
TATGAAGAGAAGACTGAATG+GGG | - | chr4_2:68791187-68791206 | Msa0618050:intron | 35.0% | |
AAAAGTGAAACTACCTCAAG+TGG | + | chr4_2:68791328-68791347 | None:intergenic | 35.0% | |
! | TCTTGTCTTTTCAGATTGGT+TGG | - | chr4_2:68791389-68791408 | Msa0618050:intron | 35.0% |
GATTTATGGTTCAGTTACTG+AGG | - | chr4_2:68791411-68791430 | Msa0618050:intron | 35.0% | |
GTTACTGAGGATATCTTAAC+AGG | - | chr4_2:68791424-68791443 | Msa0618050:intron | 35.0% | |
GGATGTAAAAGGGTAAACAA+TGG | + | chr4_2:68791668-68791687 | None:intergenic | 35.0% | |
ACAATAAGCAACTAGAGGAA+GGG | + | chr4_2:68791689-68791708 | None:intergenic | 35.0% | |
TACAATAAGCAACTAGAGGA+AGG | + | chr4_2:68791690-68791709 | None:intergenic | 35.0% | |
AAAGATTAGGAGATTACCGT+TGG | + | chr4_2:68791754-68791773 | None:intergenic | 35.0% | |
AAAGAGAATACTTGCAACGT+TGG | + | chr4_2:68792001-68792020 | None:intergenic | 35.0% | |
GTTGCAAGTATTCTCTTTCT+TGG | - | chr4_2:68792003-68792022 | Msa0618050:intron | 35.0% | |
CCAACATCTTAAGAAATCCT+TGG | + | chr4_2:68792158-68792177 | None:intergenic | 35.0% | |
CCAAGGATTTCTTAAGATGT+TGG | - | chr4_2:68792155-68792174 | Msa0618050:intron | 35.0% | |
ATAATGATAAGGGTTGTTGG+TGG | + | chr4_2:68792276-68792295 | None:intergenic | 35.0% | |
ATATCCTCCATTAAGTGCAT+CGG | + | chr4_2:68792328-68792347 | None:intergenic | 35.0% | |
TTAATGGAGGATATGAGTCT+TGG | - | chr4_2:68792334-68792353 | Msa0618050:intron | 35.0% | |
TAATGGAGGATATGAGTCTT+GGG | - | chr4_2:68792335-68792354 | Msa0618050:intron | 35.0% | |
CTGTCAACTTTGTTCACAAA+TGG | + | chr4_2:68792522-68792541 | None:intergenic | 35.0% | |
GAACCAAATATGATGCCTTC+CGG | - | chr4_2:68786282-68786301 | Msa0618050:three_prime_UTR | 40.0% | |
CAACTAGTGCTTAGTGAGAA+TGG | - | chr4_2:68786333-68786352 | Msa0618050:three_prime_UTR | 40.0% | |
ACTAGTGCTTAGTGAGAATG+GGG | - | chr4_2:68786335-68786354 | Msa0618050:three_prime_UTR | 40.0% | |
TGAGAATGGGGAAATGTTTG+TGG | - | chr4_2:68786347-68786366 | Msa0618050:three_prime_UTR | 40.0% | |
GTGTAGTTACCCAATGTGTA+AGG | - | chr4_2:68786380-68786399 | Msa0618050:three_prime_UTR | 40.0% | |
CAAAACAGGCCTTACACATT+GGG | + | chr4_2:68786392-68786411 | None:intergenic | 40.0% | |
TCAAAACAGGCCTTACACAT+TGG | + | chr4_2:68786393-68786412 | None:intergenic | 40.0% | |
GTCCCAACAGAAACAAGAAA+CGG | - | chr4_2:68786812-68786831 | Msa0618050:CDS | 40.0% | |
TCCCAACAGAAACAAGAAAC+GGG | - | chr4_2:68786813-68786832 | Msa0618050:CDS | 40.0% | |
AAAAAAAAAACGCCGTTGCC+GGG | - | chr4_2:68786869-68786888 | Msa0618050:CDS | 40.0% | |
ATTGGGTCGTTGTAGTATAG+TGG | + | chr4_2:68786936-68786955 | None:intergenic | 40.0% | |
AAATGTGAGAGAACAGTCTC+AGG | + | chr4_2:68786990-68787009 | None:intergenic | 40.0% | |
! | TCTTCGCAGAGTTTGGATTT+TGG | + | chr4_2:68787068-68787087 | None:intergenic | 40.0% |
AATCCAAACTCTGCGAAGAA+TGG | - | chr4_2:68787069-68787088 | Msa0618050:intron | 40.0% | |
TCATGAAAATCCATCCACAG+TGG | - | chr4_2:68787213-68787232 | Msa0618050:intron | 40.0% | |
TACCTCAGAGTTGTTGATCT+GGG | + | chr4_2:68787242-68787261 | None:intergenic | 40.0% | |
TTACCTCAGAGTTGTTGATC+TGG | + | chr4_2:68787243-68787262 | None:intergenic | 40.0% | |
ACAGTGTCCTCACTTGATAT+TGG | - | chr4_2:68787696-68787715 | Msa0618050:intron | 40.0% | |
AAAGGGAAAGGGAAAGTGAA+GGG | - | chr4_2:68787861-68787880 | Msa0618050:CDS | 40.0% | |
GACTAAAAAGGATGCACCTA+CGG | - | chr4_2:68787902-68787921 | Msa0618050:CDS | 40.0% | |
CACAATATGCTGTCCATTTG+AGG | + | chr4_2:68788006-68788025 | None:intergenic | 40.0% | |
! | ATGTAATTGTCTGAAGCGGA+TGG | - | chr4_2:68788319-68788338 | Msa0618050:intron | 40.0% |
ATTTGCATGATCTGCTTTGC+AGG | - | chr4_2:68788623-68788642 | Msa0618050:CDS | 40.0% | |
AGTTCTATATGGTGCGAGTT+TGG | + | chr4_2:68788701-68788720 | None:intergenic | 40.0% | |
AATTGTGCGGCTAGTAATCT+TGG | - | chr4_2:68788726-68788745 | Msa0618050:CDS | 40.0% | |
ATTGTGCGGCTAGTAATCTT+GGG | - | chr4_2:68788727-68788746 | Msa0618050:CDS | 40.0% | |
!! | AGAGGAAAAGCACTTTCAAC+AGG | + | chr4_2:68788781-68788800 | None:intergenic | 40.0% |
!!! | TTGAAAGTGCTTTTCCTCTG+TGG | - | chr4_2:68788782-68788801 | Msa0618050:CDS | 40.0% |
TGTTGGATCAGTTCCCTAAA+TGG | - | chr4_2:68788848-68788867 | Msa0618050:intron | 40.0% | |
CGATTAACTGGAGACCATTT+AGG | + | chr4_2:68788865-68788884 | None:intergenic | 40.0% | |
ATATTGAGAACCTCTCTGCA+AGG | - | chr4_2:68788893-68788912 | Msa0618050:intron | 40.0% | |
TTGATACTGAGCATGCACTT+CGG | - | chr4_2:68789042-68789061 | Msa0618050:intron | 40.0% | |
CATGACAGGTTTGAAAGAGA+GGG | - | chr4_2:68789093-68789112 | Msa0618050:intron | 40.0% | |
TACAGTGCTTTCTATCCTTG+CGG | - | chr4_2:68789197-68789216 | Msa0618050:intron | 40.0% | |
GCTCACATTTGAATCTCTTG+TGG | - | chr4_2:68789275-68789294 | Msa0618050:intron | 40.0% | |
CAGCTGAATTTGCAAAGAAG+TGG | - | chr4_2:68789301-68789320 | Msa0618050:CDS | 40.0% | |
AAGTAATACTCAGGTGCTCT+TGG | + | chr4_2:68789357-68789376 | None:intergenic | 40.0% | |
AAGGTTGCACTTTGTCTTTC+AGG | + | chr4_2:68789398-68789417 | None:intergenic | 40.0% | |
! | AGTGCAACCTTCTTTTGTGA+AGG | - | chr4_2:68789407-68789426 | Msa0618050:CDS | 40.0% |
CTACGTTCCTTCACAAAAGA+AGG | + | chr4_2:68789417-68789436 | None:intergenic | 40.0% | |
AGAAAACACCAGAAGAAGGA+TGG | - | chr4_2:68789630-68789649 | Msa0618050:CDS | 40.0% | |
! | TGATCACGTGAGTTATTTCC+AGG | + | chr4_2:68789680-68789699 | None:intergenic | 40.0% |
GACATACCTGAATCATTCCA+GGG | + | chr4_2:68789703-68789722 | None:intergenic | 40.0% | |
TCGAAGGAAATGAACTTCCT+AGG | - | chr4_2:68790003-68790022 | Msa0618050:intron | 40.0% | |
! | GTTTCTAGAGAGAAAAGACC+AGG | - | chr4_2:68790035-68790054 | Msa0618050:intron | 40.0% |
TGTATGGATTTATCCAGGTG+AGG | - | chr4_2:68790162-68790181 | Msa0618050:CDS | 40.0% | |
GTATGGATTTATCCAGGTGA+GGG | - | chr4_2:68790163-68790182 | Msa0618050:CDS | 40.0% | |
TTTCTCATGGATCCAGAAGT+TGG | - | chr4_2:68790278-68790297 | Msa0618050:CDS | 40.0% | |
CAAACATCTCTACCAACTTC+TGG | + | chr4_2:68790293-68790312 | None:intergenic | 40.0% | |
CAATTCCCCCAAAGATTTGA+TGG | - | chr4_2:68790320-68790339 | Msa0618050:CDS | 40.0% | |
GTAAACATGAGAGGACTTGA+TGG | - | chr4_2:68790698-68790717 | Msa0618050:intron | 40.0% | |
CATTCAAGGACCAATGTATG+TGG | - | chr4_2:68790721-68790740 | Msa0618050:intron | 40.0% | |
TTCAAGGACCAATGTATGTG+GGG | - | chr4_2:68790723-68790742 | Msa0618050:intron | 40.0% | |
!!! | GGACTGGTTGTGTTTTCAAT+CGG | - | chr4_2:68790744-68790763 | Msa0618050:intron | 40.0% |
TTCAATCGGCAAGCACTTTA+TGG | - | chr4_2:68790758-68790777 | Msa0618050:intron | 40.0% | |
GTGAATTGACCATAGAAGGT+GGG | + | chr4_2:68790790-68790809 | None:intergenic | 40.0% | |
! | GGGTTTCTAGAGATGGAAAA+AGG | - | chr4_2:68790855-68790874 | Msa0618050:intron | 40.0% |
TCTGCATTAATGGAGAATGG+AGG | - | chr4_2:68791097-68791116 | Msa0618050:CDS | 40.0% | |
CATTAATGGAGAATGGAGGA+GGG | - | chr4_2:68791101-68791120 | Msa0618050:CDS | 40.0% | |
ATTAATGGAGAATGGAGGAG+GGG | - | chr4_2:68791102-68791121 | Msa0618050:CDS | 40.0% | |
ATTGAAGGATCTGCAGATTC+TGG | + | chr4_2:68791130-68791149 | None:intergenic | 40.0% | |
AGATCCTTCAATGCTGATCA+AGG | - | chr4_2:68791138-68791157 | Msa0618050:CDS | 40.0% | |
GCCATTCATGTAATTAGCTG+TGG | - | chr4_2:68791163-68791182 | Msa0618050:CDS | 40.0% | |
CCCACAGCTAATTACATGAA+TGG | + | chr4_2:68791167-68791186 | None:intergenic | 40.0% | |
GGTATGAAGAGAAGACTGAA+TGG | - | chr4_2:68791185-68791204 | Msa0618050:intron | 40.0% | |
CACCTATCAACTTGTCTGAT+CGG | - | chr4_2:68791518-68791537 | Msa0618050:intron | 40.0% | |
!! | AACCGATCAGACAAGTTGAT+AGG | + | chr4_2:68791523-68791542 | None:intergenic | 40.0% |
CTAGAGGAAGGGATGTAAAA+GGG | + | chr4_2:68791678-68791697 | None:intergenic | 40.0% | |
ACTAGAGGAAGGGATGTAAA+AGG | + | chr4_2:68791679-68791698 | None:intergenic | 40.0% | |
AAATTTCAGTTCAGTCCCCA+TGG | - | chr4_2:68791815-68791834 | Msa0618050:CDS | 40.0% | |
! | TATGGCGTAATGAGCAGTTT+TGG | - | chr4_2:68792094-68792113 | Msa0618050:intron | 40.0% |
! | ATGGCGTAATGAGCAGTTTT+GGG | - | chr4_2:68792095-68792114 | Msa0618050:intron | 40.0% |
!!! | AATGAGCAGTTTTGGGTGAT+TGG | - | chr4_2:68792102-68792121 | Msa0618050:intron | 40.0% |
GGATTTCTTAAGATGTTGGC+TGG | - | chr4_2:68792159-68792178 | Msa0618050:intron | 40.0% | |
! | GGATTTTCCGATGCACTTAA+TGG | - | chr4_2:68792318-68792337 | Msa0618050:intron | 40.0% |
! | TTTTCCGATGCACTTAATGG+AGG | - | chr4_2:68792321-68792340 | Msa0618050:intron | 40.0% |
AATGGAGGATATGAGTCTTG+GGG | - | chr4_2:68792336-68792355 | Msa0618050:intron | 40.0% | |
AAGAAAACCTTCCCAAAGAG+AGG | + | chr4_2:68792363-68792382 | None:intergenic | 40.0% | |
! | GAAGGTTTTCTTTGCCTTCT+GGG | - | chr4_2:68792371-68792390 | Msa0618050:intron | 40.0% |
GAGATGAAAAATCACCCAGA+AGG | + | chr4_2:68792388-68792407 | None:intergenic | 40.0% | |
TCATCTCTATCCATTCCTCA+AGG | - | chr4_2:68792401-68792420 | Msa0618050:intron | 40.0% | |
CATCTCTATCCATTCCTCAA+GGG | - | chr4_2:68792402-68792421 | Msa0618050:intron | 40.0% | |
GAATAACAATGGTAGGAGTG+CGG | + | chr4_2:68792446-68792465 | None:intergenic | 40.0% | |
! | CTCCTACCATTGTTATTCTG+TGG | - | chr4_2:68792448-68792467 | Msa0618050:intron | 40.0% |
GACCACAGAATAACAATGGT+AGG | + | chr4_2:68792453-68792472 | None:intergenic | 40.0% | |
CACTGACCACAGAATAACAA+TGG | + | chr4_2:68792457-68792476 | None:intergenic | 40.0% | |
! | GGATGCTTACCAAGAGTTTT+TGG | - | chr4_2:68792592-68792611 | Msa0618050:CDS | 40.0% |
TTCCCCACAAATGTTGCAGA+GGG | + | chr4_2:68786313-68786332 | None:intergenic | 45.0% | |
!! | GCCCGTTTCTTGTTTCTGTT+GGG | + | chr4_2:68786817-68786836 | None:intergenic | 45.0% |
AAAAAAAAACGCCGTTGCCG+GGG | - | chr4_2:68786870-68786889 | Msa0618050:CDS | 45.0% | |
TTCCCAGATCAACAACTCTG+AGG | - | chr4_2:68787237-68787256 | Msa0618050:intron | 45.0% | |
ATGAAAGGCTGGAAAGGGAA+AGG | - | chr4_2:68787849-68787868 | Msa0618050:CDS | 45.0% | |
TGAAAGGCTGGAAAGGGAAA+GGG | - | chr4_2:68787850-68787869 | Msa0618050:CDS | 45.0% | |
GAAAGGGAAAGGGAAAGTGA+AGG | - | chr4_2:68787860-68787879 | Msa0618050:CDS | 45.0% | |
AAGGGAAAGGGAAAGTGAAG+GGG | - | chr4_2:68787862-68787881 | Msa0618050:CDS | 45.0% | |
AGCAGCAGATGGAAGAAGTT+CGG | - | chr4_2:68787952-68787971 | Msa0618050:CDS | 45.0% | |
ACTACTTGAGCTGCACACAA+GGG | + | chr4_2:68788115-68788134 | None:intergenic | 45.0% | |
TACTACTTGAGCTGCACACA+AGG | + | chr4_2:68788116-68788135 | None:intergenic | 45.0% | |
GCAGCTCAAGTAGTAAATCG+AGG | - | chr4_2:68788121-68788140 | Msa0618050:CDS | 45.0% | |
AGTAAATCGAGGCACGATTG+TGG | - | chr4_2:68788132-68788151 | Msa0618050:CDS | 45.0% | |
! | GTCTTTCAAGTGCAACCTGA+TGG | + | chr4_2:68788521-68788540 | None:intergenic | 45.0% |
! | GTTTGCATTTTCCTGGGTGT+TGG | - | chr4_2:68788831-68788850 | Msa0618050:intron | 45.0% |
TGTGTGTTTACCTTGCAGAG+AGG | + | chr4_2:68788906-68788925 | None:intergenic | 45.0% | |
CCTCTCTTTCAAACCTGTCA+TGG | + | chr4_2:68789095-68789114 | None:intergenic | 45.0% | |
CCATGACAGGTTTGAAAGAG+AGG | - | chr4_2:68789092-68789111 | Msa0618050:intron | 45.0% | |
TCAACAGAAGCAAGTCCAGA+GGG | + | chr4_2:68789123-68789142 | None:intergenic | 45.0% | |
ATCAACAGAAGCAAGTCCAG+AGG | + | chr4_2:68789124-68789143 | None:intergenic | 45.0% | |
GAAGGAACGTAGAGCAATGA+AGG | - | chr4_2:68789425-68789444 | Msa0618050:intron | 45.0% | |
GCTCAGAAAACACCAGAAGA+AGG | - | chr4_2:68789626-68789645 | Msa0618050:CDS | 45.0% | |
TGCATAGTCCATCCTTCTTC+TGG | + | chr4_2:68789641-68789660 | None:intergenic | 45.0% | |
!! | GAAGGATGGACTATGCAAGA+TGG | - | chr4_2:68789644-68789663 | Msa0618050:CDS | 45.0% |
CTATGCAAGATGGAACACCT+TGG | - | chr4_2:68789654-68789673 | Msa0618050:CDS | 45.0% | |
AATAACTCACGTGATCACCC+TGG | - | chr4_2:68789683-68789702 | Msa0618050:CDS | 45.0% | |
TGATCACCCTGGAATGATTC+AGG | - | chr4_2:68789694-68789713 | Msa0618050:CDS | 45.0% | |
GGACATACCTGAATCATTCC+AGG | + | chr4_2:68789704-68789723 | None:intergenic | 45.0% | |
!! | TTCTTGTGGTGTTGGTATCC+TGG | + | chr4_2:68790056-68790075 | None:intergenic | 45.0% |
TACCAACACCACAAGAAAGC+AGG | - | chr4_2:68790059-68790078 | Msa0618050:intron | 45.0% | |
TTTCAGCACCTGCTTTCTTG+TGG | + | chr4_2:68790070-68790089 | None:intergenic | 45.0% | |
GGTTGGCATATCGATCACTA+CGG | + | chr4_2:68790352-68790371 | None:intergenic | 45.0% | |
! | AGAGGACTTGATGGCATTCA+AGG | - | chr4_2:68790707-68790726 | Msa0618050:intron | 45.0% |
GGTGAATTGACCATAGAAGG+TGG | + | chr4_2:68790791-68790810 | None:intergenic | 45.0% | |
CAGCAACAGCATGAAGACAT+TGG | + | chr4_2:68790812-68790831 | None:intergenic | 45.0% | |
AGAAACCCGTGACACTTCTT+TGG | + | chr4_2:68790843-68790862 | None:intergenic | 45.0% | |
CTGCAGGAAGAAAAGAAACC+AGG | + | chr4_2:68790994-68791013 | None:intergenic | 45.0% | |
GCATTAATGGAGAATGGAGG+AGG | - | chr4_2:68791100-68791119 | Msa0618050:CDS | 45.0% | |
TCCTTCAATGCTGATCAAGG+AGG | - | chr4_2:68791141-68791160 | Msa0618050:CDS | 45.0% | |
GAAGACTGAATGGGGAAAAG+AGG | - | chr4_2:68791195-68791214 | Msa0618050:intron | 45.0% | |
CTGAATGGGGAAAAGAGGTT+TGG | - | chr4_2:68791200-68791219 | Msa0618050:intron | 45.0% | |
CCTTTGAATGCAGGCCTTAA+GGG | + | chr4_2:68791493-68791512 | None:intergenic | 45.0% | |
CCTTAAGGCCTGCATTCAAA+GGG | - | chr4_2:68791491-68791510 | Msa0618050:intron | 45.0% | |
TAAGTAGACATTGCCCCCTT+TGG | - | chr4_2:68791587-68791606 | Msa0618050:intron | 45.0% | |
TCCTCCAACTGCATACCAAA+GGG | + | chr4_2:68791605-68791624 | None:intergenic | 45.0% | |
ATCTCTGCAGCCATTTGAGA+CGG | + | chr4_2:68791630-68791649 | None:intergenic | 45.0% | |
TCTCAAATGGCTGCAGAGAT+TGG | - | chr4_2:68791630-68791649 | Msa0618050:intron | 45.0% | |
!! | CATCTGTTTGCTGTGTTCCA+AGG | - | chr4_2:68792138-68792157 | Msa0618050:intron | 45.0% |
!! | AACATGGTTGGTGTTGTTGC+TGG | - | chr4_2:68792297-68792316 | Msa0618050:intron | 45.0% |
! | GGAAGGTTTTCTTTGCCTTC+TGG | - | chr4_2:68792370-68792389 | Msa0618050:intron | 45.0% |
GCTATGACTCACACAAGCAA+TGG | + | chr4_2:68792661-68792680 | None:intergenic | 45.0% | |
TGTGTGAGTCATAGCTCATG+AGG | - | chr4_2:68792666-68792685 | Msa0618050:CDS | 45.0% | |
!! | GCACCGGAAGGCATCATATT+TGG | + | chr4_2:68786288-68786307 | None:intergenic | 50.0% |
CTCCCCTCTGCAACATTTGT+GGG | - | chr4_2:68786307-68786326 | Msa0618050:three_prime_UTR | 50.0% | |
TCCCCTCTGCAACATTTGTG+GGG | - | chr4_2:68786308-68786327 | Msa0618050:three_prime_UTR | 50.0% | |
TCCCCACAAATGTTGCAGAG+GGG | + | chr4_2:68786312-68786331 | None:intergenic | 50.0% | |
GTTCCCCACAAATGTTGCAG+AGG | + | chr4_2:68786314-68786333 | None:intergenic | 50.0% | |
AAGTGTGGCACTCCCTATGA+AGG | - | chr4_2:68786447-68786466 | Msa0618050:CDS | 50.0% | |
!! | GGCCCGTTTCTTGTTTCTGT+TGG | + | chr4_2:68786818-68786837 | None:intergenic | 50.0% |
CCACCATTCTTCGCAGAGTT+TGG | + | chr4_2:68787075-68787094 | None:intergenic | 50.0% | |
CCAAACTCTGCGAAGAATGG+TGG | - | chr4_2:68787072-68787091 | Msa0618050:intron | 50.0% | |
GACGACGACGATGACATTGT+GGG | - | chr4_2:68787190-68787209 | Msa0618050:intron | 50.0% | |
TGCACCTACGGCTGAAAATG+AGG | - | chr4_2:68787914-68787933 | Msa0618050:CDS | 50.0% | |
AAATGAGGCTGCAGTTCCAC+CGG | - | chr4_2:68787929-68787948 | Msa0618050:CDS | 50.0% | |
ACTTCTTCCATCTGCTGCTC+CGG | + | chr4_2:68787951-68787970 | None:intergenic | 50.0% | |
ATCGAGGCACGATTGTGGTT+TGG | - | chr4_2:68788137-68788156 | Msa0618050:CDS | 50.0% | |
CTACTGGATAGTCAACCGCA+AGG | + | chr4_2:68789215-68789234 | None:intergenic | 50.0% | |
! | CGTGAGTTATTTCCAGGCCA+AGG | + | chr4_2:68789674-68789693 | None:intergenic | 50.0% |
AGTGGTGCTCGTGATATCGA+AGG | - | chr4_2:68789987-68790006 | Msa0618050:intron | 50.0% | |
CACCTGCTTTCTTGTGGTGT+TGG | + | chr4_2:68790064-68790083 | None:intergenic | 50.0% | |
GATTGGAAGCTAGAGGGTTG+TGG | + | chr4_2:68790640-68790659 | None:intergenic | 50.0% | |
GGGGAAGATTGGAAGCTAGA+GGG | + | chr4_2:68790646-68790665 | None:intergenic | 50.0% | |
TGGGGAAGATTGGAAGCTAG+AGG | + | chr4_2:68790647-68790666 | None:intergenic | 50.0% | |
CAACCAGTCCCCACATACAT+TGG | + | chr4_2:68790734-68790753 | None:intergenic | 50.0% | |
TGGCTATAGCCCACCTTCTA+TGG | - | chr4_2:68790778-68790797 | Msa0618050:intron | 50.0% | |
GTGACACTTCTTTGGTGGAG+GGG | + | chr4_2:68790835-68790854 | None:intergenic | 50.0% | |
CGTGACACTTCTTTGGTGGA+GGG | + | chr4_2:68790836-68790855 | None:intergenic | 50.0% | |
!! | CCTCCACCAAAGAAGTGTCA+CGG | - | chr4_2:68790834-68790853 | Msa0618050:intron | 50.0% |
!! | CTCCACCAAAGAAGTGTCAC+GGG | - | chr4_2:68790835-68790854 | Msa0618050:intron | 50.0% |
AACCCGTGACACTTCTTTGG+TGG | + | chr4_2:68790840-68790859 | None:intergenic | 50.0% | |
! | GTGTCACGGGTTTCTAGAGA+TGG | - | chr4_2:68790848-68790867 | Msa0618050:intron | 50.0% |
! | GCCTCCTTGATCAGCATTGA+AGG | + | chr4_2:68791145-68791164 | None:intergenic | 50.0% |
AGTAGATCGACCTCCATCCT+CGG | + | chr4_2:68791465-68791484 | None:intergenic | 50.0% | |
CGATCTACTGCATGCCCTTA+AGG | - | chr4_2:68791476-68791495 | Msa0618050:intron | 50.0% | |
CCCTTAAGGCCTGCATTCAA+AGG | - | chr4_2:68791490-68791509 | Msa0618050:intron | 50.0% | |
CCCTTTGAATGCAGGCCTTA+AGG | + | chr4_2:68791494-68791513 | None:intergenic | 50.0% | |
GTTGCACCAAGTCCTTCGAT+GGG | - | chr4_2:68791540-68791559 | Msa0618050:intron | 50.0% | |
CTCCAACTGCATACCAAAGG+GGG | + | chr4_2:68791603-68791622 | None:intergenic | 50.0% | |
CCTCCAACTGCATACCAAAG+GGG | + | chr4_2:68791604-68791623 | None:intergenic | 50.0% | |
CTCCTCCAACTGCATACCAA+AGG | + | chr4_2:68791606-68791625 | None:intergenic | 50.0% | |
CTTTGGTATGCAGTTGGAGG+AGG | - | chr4_2:68791604-68791623 | Msa0618050:intron | 50.0% | |
CCTGTGAGAAGGCAAATTGC+TGG | + | chr4_2:68791718-68791737 | None:intergenic | 50.0% | |
CCAGCAATTTGCCTTCTCAC+AGG | - | chr4_2:68791715-68791734 | Msa0618050:intron | 50.0% | |
!!! | GAGCAGTTTTGGGTGATTGG+AGG | - | chr4_2:68792105-68792124 | Msa0618050:intron | 50.0% |
CTTGGCAGTGACAGTGAAGT+TGG | + | chr4_2:68792193-68792212 | None:intergenic | 50.0% | |
CAACTTCACTGTCACTGCCA+AGG | - | chr4_2:68792191-68792210 | Msa0618050:intron | 50.0% | |
AGTCTTGGGGACCTCTCTTT+GGG | - | chr4_2:68792349-68792368 | Msa0618050:intron | 50.0% | |
TCCATTCCTCAAGGGTCTCA+TGG | - | chr4_2:68792410-68792429 | Msa0618050:intron | 50.0% | |
CCATTCCTCAAGGGTCTCAT+GGG | - | chr4_2:68792411-68792430 | Msa0618050:intron | 50.0% | |
CATTCCTCAAGGGTCTCATG+GGG | - | chr4_2:68792412-68792431 | Msa0618050:intron | 50.0% | |
!! | CAATGGTAGGAGTGCGGTTT+TGG | + | chr4_2:68792440-68792459 | None:intergenic | 50.0% |
! | AATGTTGCAGAGGGGAGCAC+CGG | + | chr4_2:68786304-68786323 | None:intergenic | 55.0% |
GCTCCCCTCTGCAACATTTG+TGG | - | chr4_2:68786306-68786325 | Msa0618050:three_prime_UTR | 55.0% | |
AAGTATTCCCGCCTGTCACG+CGG | + | chr4_2:68786912-68786931 | None:intergenic | 55.0% | |
CGACGACGACGATGACATTG+TGG | - | chr4_2:68787189-68787208 | Msa0618050:intron | 55.0% | |
ATCTGGGAAGCCACTGTGGA+TGG | + | chr4_2:68787226-68787245 | None:intergenic | 55.0% | |
GTTGATCTGGGAAGCCACTG+TGG | + | chr4_2:68787230-68787249 | None:intergenic | 55.0% | |
! | GCAGCCTCATTTTCAGCCGT+AGG | + | chr4_2:68787921-68787940 | None:intergenic | 55.0% |
TCTGCTTTGCAGGTCCACAG+AGG | - | chr4_2:68788633-68788652 | Msa0618050:CDS | 55.0% | |
AGGGAACTGATCCAACACCC+AGG | + | chr4_2:68788845-68788864 | None:intergenic | 55.0% | |
CAAGATGGAACACCTTGGCC+TGG | - | chr4_2:68789659-68789678 | Msa0618050:CDS | 55.0% | |
CACTGTGTCCGAGGAAAACC+TGG | + | chr4_2:68789971-68789990 | None:intergenic | 55.0% | |
! | CAGGTTTTCCTCGGACACAG+TGG | - | chr4_2:68789969-68789988 | Msa0618050:intron | 55.0% |
!! | AGCAGGTGCTGAAAACGCAC+TGG | - | chr4_2:68790076-68790095 | Msa0618050:intron | 55.0% |
GGACCAATGTATGTGGGGAC+TGG | - | chr4_2:68790728-68790747 | Msa0618050:intron | 55.0% | |
CCGTGACACTTCTTTGGTGG+AGG | + | chr4_2:68790837-68790856 | None:intergenic | 55.0% | |
! | TCAAGATGCAGTGCCGAGGA+TGG | - | chr4_2:68791449-68791468 | Msa0618050:intron | 55.0% |
!! | GGTGCTGACCCTTTGAATGC+AGG | + | chr4_2:68791502-68791521 | None:intergenic | 55.0% |
GGTTGCACCAAGTCCTTCGA+TGG | - | chr4_2:68791539-68791558 | Msa0618050:intron | 55.0% | |
CAAGTGCCCATCGAAGGACT+TGG | + | chr4_2:68791549-68791568 | None:intergenic | 55.0% | |
CAAGTCCTTCGATGGGCACT+TGG | - | chr4_2:68791547-68791566 | Msa0618050:intron | 55.0% | |
CTGATCCAAGTGCCCATCGA+AGG | + | chr4_2:68791555-68791574 | None:intergenic | 55.0% | |
TGCCCCCTTTGGTATGCAGT+TGG | - | chr4_2:68791598-68791617 | Msa0618050:intron | 55.0% | |
CCCCTTTGGTATGCAGTTGG+AGG | - | chr4_2:68791601-68791620 | Msa0618050:intron | 55.0% | |
TTGGAGGAGGCCGTCTCAAA+TGG | - | chr4_2:68791617-68791636 | Msa0618050:intron | 55.0% | |
CAAGTGTGCTTGAGCTGCGT+TGG | - | chr4_2:68792049-68792068 | Msa0618050:intron | 55.0% | |
GCTGCTGAGGATACCGAGTT+TGG | - | chr4_2:68792213-68792232 | Msa0618050:intron | 55.0% | |
GAGTCTTGGGGACCTCTCTT+TGG | - | chr4_2:68792348-68792367 | Msa0618050:intron | 55.0% | |
! | TTGGGGACCTCTCTTTGGGA+AGG | - | chr4_2:68792353-68792372 | Msa0618050:intron | 55.0% |
CCCATGAGACCCTTGAGGAA+TGG | + | chr4_2:68792414-68792433 | None:intergenic | 55.0% | |
AGTATTCCCGCCTGTCACGC+GGG | + | chr4_2:68786911-68786930 | None:intergenic | 60.0% | |
AGTTCCACCGGAGCAGCAGA+TGG | - | chr4_2:68787941-68787960 | Msa0618050:CDS | 60.0% | |
TCTTCCATCTGCTGCTCCGG+TGG | + | chr4_2:68787948-68787967 | None:intergenic | 60.0% | |
GAAAGAGAGGGCGAACCCTC+TGG | - | chr4_2:68789105-68789124 | Msa0618050:intron | 60.0% | |
GAACTGCAGACACCCTCACC+TGG | + | chr4_2:68790178-68790197 | None:intergenic | 60.0% | |
GGGTTCAAGATGCAGTGCCG+AGG | - | chr4_2:68791445-68791464 | Msa0618050:intron | 60.0% | |
! | AGATGCAGTGCCGAGGATGG+AGG | - | chr4_2:68791452-68791471 | Msa0618050:intron | 60.0% |
GTGCTTGAGCTGCGTTGGAG+TGG | - | chr4_2:68792054-68792073 | Msa0618050:intron | 60.0% | |
TGTCACTGCCAAGGCTGCTG+AGG | - | chr4_2:68792200-68792219 | Msa0618050:intron | 60.0% | |
CTCGGTATCCTCAGCAGCCT+TGG | + | chr4_2:68792211-68792230 | None:intergenic | 60.0% | |
!! | TTGCAGAGGGGAGCACCGGA+AGG | + | chr4_2:68786300-68786319 | None:intergenic | 65.0% |
TGGCAGAGCAGCAGCCTCTG+TGG | + | chr4_2:68788650-68788669 | None:intergenic | 65.0% | |
CACGAGCACCACTGTGTCCG+AGG | + | chr4_2:68789980-68789999 | None:intergenic | 65.0% | |
CCGGGTTCGATCCCCGGCAA+CGG | + | chr4_2:68786884-68786903 | None:intergenic | 70.0% | |
CCGTTGCCGGGGATCGAACC+CGG | - | chr4_2:68786881-68786900 | Msa0618050:CDS | 70.0% | |
CGTTGCCGGGGATCGAACCC+GGG | - | chr4_2:68786882-68786901 | Msa0618050:CDS | 70.0% | |
GGTGACCCGGGTTCGATCCC+CGG | + | chr4_2:68786890-68786909 | None:intergenic | 70.0% | |
GGCGCCCCATGAGACCCTTG+AGG | + | chr4_2:68792419-68792438 | None:intergenic | 70.0% | |
ACCCGGGTCACCCGCGTGAC+AGG | - | chr4_2:68786898-68786917 | Msa0618050:CDS | 75.0% | |
GCCTGTCACGCGGGTGACCC+GGG | + | chr4_2:68786902-68786921 | None:intergenic | 75.0% | |
CGCCTGTCACGCGGGTGACC+CGG | + | chr4_2:68786903-68786922 | None:intergenic | 75.0% | |
CGGGTCACCCGCGTGACAGG+CGG | - | chr4_2:68786901-68786920 | Msa0618050:CDS | 75.0% | |
GGGTCACCCGCGTGACAGGC+GGG | - | chr4_2:68786902-68786921 | Msa0618050:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 68786249 | 68792756 | 68786249 | ID=Msa0618050;Name=Msa0618050 |
chr4_2 | mRNA | 68786249 | 68792756 | 68786249 | ID=Msa0618050-mRNA-1;Parent=Msa0618050;Name=Msa0618050-mRNA-1;_AED=0.12;_eAED=0.12;_QI=42|1|1|1|1|1|13|175|988 |
chr4_2 | exon | 68786249 | 68787011 | 68786249 | ID=Msa0618050-mRNA-1:exon:19829;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68787249 | 68787602 | 68787249 | ID=Msa0618050-mRNA-1:exon:19828;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68787789 | 68787991 | 68787789 | ID=Msa0618050-mRNA-1:exon:19827;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68788085 | 68788307 | 68788085 | ID=Msa0618050-mRNA-1:exon:19826;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68788614 | 68788826 | 68788614 | ID=Msa0618050-mRNA-1:exon:19825;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68788908 | 68789033 | 68788908 | ID=Msa0618050-mRNA-1:exon:19824;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68789290 | 68789427 | 68789290 | ID=Msa0618050-mRNA-1:exon:19823;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68789559 | 68789904 | 68789559 | ID=Msa0618050-mRNA-1:exon:19822;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68790091 | 68790360 | 68790091 | ID=Msa0618050-mRNA-1:exon:19821;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68791032 | 68791200 | 68791032 | ID=Msa0618050-mRNA-1:exon:19820;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68791288 | 68791342 | 68791288 | ID=Msa0618050-mRNA-1:exon:19819;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68791747 | 68791850 | 68791747 | ID=Msa0618050-mRNA-1:exon:19818;Parent=Msa0618050-mRNA-1 |
chr4_2 | exon | 68792537 | 68792756 | 68792537 | ID=Msa0618050-mRNA-1:exon:19817;Parent=Msa0618050-mRNA-1 |
chr4_2 | five_prime_UTR | 68792715 | 68792756 | 68792715 | ID=Msa0618050-mRNA-1:five_prime_utr;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68792537 | 68792714 | 68792537 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68791747 | 68791850 | 68791747 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68791288 | 68791342 | 68791288 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68791032 | 68791200 | 68791032 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68790091 | 68790360 | 68790091 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68789559 | 68789904 | 68789559 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68789290 | 68789427 | 68789290 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68788908 | 68789033 | 68788908 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68788614 | 68788826 | 68788614 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68788085 | 68788307 | 68788085 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68787789 | 68787991 | 68787789 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68787249 | 68787602 | 68787249 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | CDS | 68786424 | 68787011 | 68786424 | ID=Msa0618050-mRNA-1:cds;Parent=Msa0618050-mRNA-1 |
chr4_2 | three_prime_UTR | 68786249 | 68786423 | 68786249 | ID=Msa0618050-mRNA-1:three_prime_utr;Parent=Msa0618050-mRNA-1 |
Gene Sequence |
Protein sequence |