AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291090 MtrunA17_Chr2g0311701 91.328 369 32 0 326 694 13 381 0.0 704
Msa0291090 MtrunA17_Chr2g0311681 85.095 369 55 0 320 688 1 369 0.0 666
Msa0291090 MtrunA17_Chr2g0311691 82.703 370 64 0 320 689 1 370 0.0 651
Msa0291090 MtrunA17_Chr2g0311721 97.771 314 7 0 11 324 11 324 0.0 640
Msa0291090 MtrunA17_Chr2g0311711 83.196 363 58 1 326 688 11 370 0.0 639
Msa0291090 MtrunA17_Chr2g0311741 71.988 332 87 2 357 688 2 327 5.95e-174 499
Msa0291090 MtrunA17_Chr1g0187821 58.333 372 148 3 320 688 3 370 7.51e-154 450
Msa0291090 MtrunA17_Chr7g0235951 57.778 360 148 3 330 688 17 373 1.21e-152 447
Msa0291090 MtrunA17_Chr1g0187831 56.098 369 154 4 324 687 8 373 1.63e-149 439
Msa0291090 MtrunA17_Chr1g0187811 57.766 367 145 4 330 688 129 493 1.84e-149 443
Msa0291090 MtrunA17_Chr8g0335411 57.609 368 152 3 322 688 9 373 8.83e-147 432
Msa0291090 MtrunA17_Chr7g0236011 57.453 369 151 4 322 688 9 373 6.98e-141 417
Msa0291090 MtrunA17_Chr7g0247991 56.944 360 151 3 330 688 17 373 6.07e-140 414
Msa0291090 MtrunA17_Chr8g0364471 53.889 360 162 3 330 688 17 373 8.22e-139 411
Msa0291090 MtrunA17_Chr8g0336751 55.000 360 156 3 330 688 43 397 8.30e-136 405
Msa0291090 MtrunA17_Chr4g0055591 52.793 358 161 3 332 688 11 361 1.02e-134 400
Msa0291090 MtrunA17_Chr8g0336851 52.101 357 161 4 334 688 16 364 2.05e-132 395
Msa0291090 MtrunA17_Chr2g0311831 53.482 359 161 3 331 688 18 371 9.59e-131 390
Msa0291090 MtrunA17_Chr8g0336761 53.221 357 157 5 334 688 16 364 3.90e-130 389
Msa0291090 MtrunA17_Chr8g0348081 53.501 357 156 5 334 688 16 364 8.66e-130 388
Msa0291090 MtrunA17_Chr8g0354261 50.811 370 175 4 322 688 9 374 3.04e-129 387
Msa0291090 MtrunA17_Chr2g0311761 52.500 360 164 4 331 688 18 372 1.72e-128 385
Msa0291090 MtrunA17_Chr4g0066991 53.261 368 148 4 322 688 9 353 1.84e-128 384
Msa0291090 MtrunA17_Chr8g0354241 50.541 370 176 4 322 688 9 374 1.90e-128 385
Msa0291090 MtrunA17_Chr8g0336631 53.352 358 156 6 334 688 16 365 1.41e-127 382
Msa0291090 MtrunA17_Chr8g0336781 51.955 358 161 5 334 688 51 400 4.68e-127 382
Msa0291090 MtrunA17_Chr2g0311861 52.089 359 146 4 331 688 14 347 1.86e-124 374
Msa0291090 MtrunA17_Chr2g0311921 50.833 360 170 4 331 688 4 358 2.25e-124 374
Msa0291090 MtrunA17_Chr8g0336861 51.532 359 162 7 334 688 16 366 1.63e-123 372
Msa0291090 MtrunA17_Chr1g0167951 50.975 359 167 4 331 688 5 355 3.86e-120 363
Msa0291090 MtrunA17_Chr6g0472861 49.333 375 173 8 326 690 8 375 2.14e-119 362
Msa0291090 MtrunA17_Chr4g0066121 49.861 359 168 8 334 688 16 366 3.88e-119 360
Msa0291090 MtrunA17_Chr1g0167911 50.882 340 160 4 331 670 5 337 1.28e-117 356
Msa0291090 MtrunA17_Chr1g0167961 50.716 349 164 5 321 668 10 351 8.62e-117 355
Msa0291090 MtrunA17_Chr7g0225881 48.626 364 177 5 330 688 12 370 1.43e-113 347
Msa0291090 MtrunA17_Chr1g0184241 49.030 361 171 5 330 688 18 367 1.54e-112 343
Msa0291090 MtrunA17_Chr4g0011311 56.569 274 117 1 330 603 17 288 1.15e-111 339
Msa0291090 MtrunA17_Chr7g0235981 48.753 361 149 5 330 689 3 328 4.59e-111 338
Msa0291090 MtrunA17_Chr8g0362741 56.569 274 102 3 330 603 17 273 1.03e-104 320
Msa0291090 MtrunA17_Chr1g0167931 47.458 354 140 6 331 683 5 313 1.65e-101 313
Msa0291090 MtrunA17_Chr7g0266651 39.266 354 210 3 330 683 8 356 3.20e-89 283
Msa0291090 MtrunA17_Chr1g0161081 40.782 358 202 3 330 686 21 369 3.18e-83 268
Msa0291090 MtrunA17_Chr1g0161111 41.061 358 201 3 330 686 80 428 9.75e-82 266
Msa0291090 MtrunA17_Chr1g0161041 40.223 358 204 3 330 686 44 392 4.03e-81 263
Msa0291090 MtrunA17_Chr8g0336831 46.753 231 117 3 334 562 16 242 3.74e-71 231
Msa0291090 MtrunA17_Chr8g0364161 56.069 173 74 1 324 496 11 181 7.27e-65 213
Msa0291090 MtrunA17_Chr2g0311751 71.739 138 39 0 357 494 2 139 1.52e-64 211
Msa0291090 MtrunA17_Chr8g0336871 57.778 180 65 3 506 684 1 170 9.43e-62 204
Msa0291090 MtrunA17_Chr8g0336801 59.375 160 60 2 530 688 1 156 8.84e-61 200
Msa0291090 MtrunA17_Chr7g0242551 33.528 343 204 8 341 669 10 342 2.27e-54 190
Msa0291090 MtrunA17_Chr4g0006371 31.564 358 216 7 341 677 9 358 2.30e-53 188
Msa0291090 MtrunA17_Chr6g0455481 36.278 317 174 10 371 677 32 330 2.97e-52 184
Msa0291090 MtrunA17_Chr5g0426891 31.884 345 216 10 345 682 3 335 3.93e-52 184
Msa0291090 MtrunA17_Chr3g0128001 35.099 302 180 5 381 678 37 326 1.30e-51 182
Msa0291090 MtrunA17_Chr7g0235991 52.941 153 72 0 371 523 10 162 2.29e-50 174
Msa0291090 MtrunA17_Chr5g0412651 35.974 303 178 6 381 675 37 331 2.93e-50 179
Msa0291090 MtrunA17_Chr1g0179801 33.623 345 206 7 345 676 26 360 3.55e-50 179
Msa0291090 MtrunA17_Chr8g0345831 33.444 302 189 4 381 679 41 333 3.61e-50 178
Msa0291090 MtrunA17_Chr5g0412671 36.275 306 171 7 381 678 37 326 2.12e-48 174
Msa0291090 MtrunA17_Chr1g0184121 35.216 301 176 5 381 674 36 324 2.21e-48 173
Msa0291090 MtrunA17_Chr7g0265221 32.951 349 203 7 345 672 25 363 2.30e-48 174
Msa0291090 MtrunA17_Chr5g0412681 33.013 312 185 6 381 684 32 327 2.66e-48 173
Msa0291090 MtrunA17_Chr4g0045441 32.203 354 202 10 361 690 8 347 6.85e-48 172
Msa0291090 MtrunA17_Chr8g0375571 31.198 359 222 9 345 692 10 354 2.57e-47 171
Msa0291090 MtrunA17_Chr7g0220001 33.443 305 179 8 381 677 40 328 1.91e-46 168
Msa0291090 MtrunA17_Chr5g0437181 31.492 362 226 11 337 687 5 355 2.21e-46 168
Msa0291090 MtrunA17_Chr3g0126741 31.503 346 204 10 334 670 21 342 2.67e-46 168
Msa0291090 MtrunA17_Chr1g0184111 33.555 301 181 5 381 674 36 324 2.67e-46 167
Msa0291090 MtrunA17_Chr3g0093761 33.628 339 205 9 345 677 17 341 3.53e-46 167
Msa0291090 MtrunA17_Chr7g0220011 34.304 309 171 8 381 677 38 326 3.96e-46 167
Msa0291090 MtrunA17_Chr1g0184161 31.922 307 179 7 381 675 37 325 4.23e-46 167
Msa0291090 MtrunA17_Chr1g0184151 33.333 300 184 6 381 675 37 325 1.06e-45 166
Msa0291090 MtrunA17_Chr2g0311631 31.412 347 192 11 345 670 21 342 1.95e-45 166
Msa0291090 MtrunA17_Chr8g0336791 41.209 182 101 3 334 513 16 193 7.53e-45 159
Msa0291090 MtrunA17_Chr3g0113641 30.028 363 230 10 337 687 6 356 7.94e-45 164
Msa0291090 MtrunA17_Chr7g0265351 32.468 308 185 5 377 677 34 325 1.13e-44 163
Msa0291090 MtrunA17_Chr2g0319491 32.646 291 181 3 379 669 30 305 1.38e-44 162
Msa0291090 MtrunA17_Chr4g0045431 30.723 332 197 9 382 690 26 347 3.09e-44 162
Msa0291090 MtrunA17_Chr3g0093751 31.953 338 213 7 345 677 17 342 4.09e-44 162
Msa0291090 MtrunA17_Chr1g0184101 31.250 320 191 7 381 688 37 339 4.10e-44 161
Msa0291090 MtrunA17_Chr3g0093741 30.882 340 214 8 345 677 17 342 6.72e-44 161
Msa0291090 MtrunA17_Chr2g0314381 27.826 345 232 7 345 683 41 374 2.49e-42 157
Msa0291090 MtrunA17_Chr8g0375701 29.508 366 220 9 334 682 4 348 8.91e-42 155
Msa0291090 MtrunA17_Chr2g0314391 27.557 352 238 7 345 690 35 375 1.00e-41 156
Msa0291090 MtrunA17_Chr2g0289341 30.392 306 181 9 383 674 5 292 1.59e-41 154
Msa0291090 MtrunA17_Chr2g0314401 29.296 355 224 10 345 688 16 354 1.81e-41 154
Msa0291090 MtrunA17_Chr5g0421041 30.086 349 215 12 345 683 12 341 2.58e-41 154
Msa0291090 MtrunA17_Chr3g0121141 32.343 303 169 11 381 670 3 282 2.80e-41 153
Msa0291090 MtrunA17_Chr5g0439011 31.353 303 178 9 380 670 3 287 4.93e-41 152
Msa0291090 MtrunA17_Chr5g0423221 30.423 355 219 10 345 688 36 373 4.98e-41 154
Msa0291090 MtrunA17_Chr1g0168001 43.452 168 90 3 331 494 5 171 7.12e-41 147
Msa0291090 MtrunA17_Chr4g0045411 29.851 335 193 11 381 690 29 346 7.65e-41 152
Msa0291090 MtrunA17_Chr1g0162351 30.818 318 185 9 381 673 68 375 8.58e-41 154
Msa0291090 MtrunA17_Chr7g0239111 29.703 303 197 5 381 678 54 345 1.14e-40 152
Msa0291090 MtrunA17_Chr8g0375601 28.614 332 221 8 346 670 11 333 1.54e-40 152
Msa0291090 MtrunA17_Chr5g0420941 29.888 358 223 11 345 692 10 349 1.61e-40 152
Msa0291090 MtrunA17_Chr8g0371931 33.463 257 160 4 382 630 39 292 1.84e-40 152
Msa0291090 MtrunA17_Chr4g0045471 29.683 347 202 9 375 690 13 348 1.92e-40 151
Msa0291090 MtrunA17_Chr3g0102041 32.549 255 165 3 382 630 39 292 2.42e-40 151
Msa0291090 MtrunA17_Chr8g0370721 32.399 321 197 8 376 688 46 354 3.65e-40 150
Msa0291090 MtrunA17_Chr1g0162321 30.818 318 185 9 381 673 68 375 4.83e-40 151
Msa0291090 MtrunA17_Chr5g0421101 29.143 350 224 8 345 686 12 345 5.20e-40 150
Msa0291090 MtrunA17_Chr5g0424201 29.429 333 213 10 351 675 14 332 6.47e-40 149
Msa0291090 MtrunA17_Chr8g0371921 34.241 257 158 4 382 630 39 292 9.79e-40 150
Msa0291090 MtrunA17_Chr7g0239101 29.674 337 208 9 345 670 19 337 1.84e-39 149
Msa0291090 MtrunA17_Chr5g0423201 29.915 351 226 7 345 688 12 349 2.31e-39 149
Msa0291090 MtrunA17_Chr5g0420981 29.532 342 219 10 345 678 17 344 3.40e-39 148
Msa0291090 MtrunA17_Chr7g0250511 29.499 339 219 7 348 679 16 341 3.69e-39 148
Msa0291090 MtrunA17_Chr3g0125201 31.923 260 161 6 380 631 1 252 5.21e-39 146
Msa0291090 MtrunA17_Chr5g0423191 30.791 354 216 13 346 688 13 348 5.44e-39 147
Msa0291090 MtrunA17_Chr5g0421091 30.532 357 202 13 345 684 10 337 5.53e-39 147
Msa0291090 MtrunA17_Chr5g0421011 29.545 352 225 9 345 688 12 348 6.10e-39 147
Msa0291090 MtrunA17_Chr8g0375671 25.982 331 229 7 345 669 17 337 6.64e-39 147
Msa0291090 MtrunA17_Chr5g0420951 27.933 358 231 9 345 691 17 358 7.74e-39 147
Msa0291090 MtrunA17_Chr5g0405411 32.685 257 162 4 382 630 39 292 1.91e-38 146
Msa0291090 MtrunA17_Chr4g0045451 27.928 333 205 9 382 690 26 347 2.05e-38 145
Msa0291090 MtrunA17_Chr8g0370711 32.423 293 183 6 376 662 46 329 2.35e-38 145
Msa0291090 MtrunA17_Chr8g0364171 56.364 110 48 0 494 603 17 126 2.48e-38 139
Msa0291090 MtrunA17_Chr8g0365241 28.655 342 221 8 345 678 22 348 2.68e-38 145
Msa0291090 MtrunA17_Chr1g0162361 30.303 330 192 10 382 690 27 339 2.81e-38 145
Msa0291090 MtrunA17_Chr1g0204181 32.797 311 179 6 379 672 56 353 4.64e-38 145
Msa0291090 MtrunA17_Chr5g0398291 28.280 343 224 8 346 674 8 342 5.95e-38 144
Msa0291090 MtrunA17_Chr5g0423251 29.745 353 223 10 345 688 12 348 5.98e-38 144
Msa0291090 MtrunA17_Chr1g0167921 56.034 116 51 0 496 611 50 165 6.64e-38 139
Msa0291090 MtrunA17_Chr3g0109041 28.249 354 225 9 338 677 2 340 1.52e-37 143
Msa0291090 MtrunA17_Chr4g0050031 28.660 321 199 9 382 688 62 366 1.63e-37 144
Msa0291090 MtrunA17_Chr8g0375681 30.466 279 180 5 416 688 15 285 3.62e-37 140
Msa0291090 MtrunA17_Chr3g0145171 29.739 306 198 7 376 675 46 340 5.59e-37 142
Msa0291090 MtrunA17_Chr5g0420901 28.986 345 222 8 345 684 11 337 7.46e-37 141
Msa0291090 MtrunA17_Chr1g0162191 30.032 313 196 8 373 678 38 334 7.90e-37 141
Msa0291090 MtrunA17_Chr2g0296371 31.338 284 181 4 401 678 70 345 1.34e-36 141
Msa0291090 MtrunA17_Chr7g0239121 29.545 308 190 9 382 678 51 342 4.23e-36 139
Msa0291090 MtrunA17_Chr2g0332191 28.451 355 204 12 352 683 23 350 2.18e-35 137
Msa0291090 MtrunA17_Chr7g0239821 29.682 283 182 6 403 678 82 354 3.66e-35 137
Msa0291090 MtrunA17_Chr6g0474391 29.966 297 188 5 379 663 61 349 5.54e-35 137
Msa0291090 MtrunA17_Chr4g0064781 30.097 309 197 8 371 673 39 334 6.86e-35 135
Msa0291090 MtrunA17_Chr3g0114861 30.409 342 206 9 346 675 6 327 1.13e-34 134
Msa0291090 MtrunA17_Chr2g0311821 69.474 95 23 2 386 478 11 101 2.15e-34 127
Msa0291090 MtrunA17_Chr3g0087031 26.934 349 239 6 345 688 23 360 2.51e-34 134
Msa0291090 MtrunA17_Chr5g0424211 28.707 317 198 11 355 659 16 316 5.58e-34 132
Msa0291090 MtrunA17_Chr5g0423211 27.954 347 226 8 345 682 12 343 6.59e-34 133
Msa0291090 MtrunA17_Chr5g0420721 32.365 241 146 6 462 694 25 256 6.14e-33 127
Msa0291090 MtrunA17_Chr8g0351101 30.164 305 194 6 379 672 51 347 7.17e-33 130
Msa0291090 MtrunA17_Chr7g0232161 31.047 277 179 6 345 615 24 294 1.74e-32 128
Msa0291090 MtrunA17_Chr6g0488511 26.523 279 185 8 380 648 1 269 7.28e-32 125
Msa0291090 MtrunA17_Chr1g0191201 27.215 316 196 7 376 672 47 347 9.33e-32 127
Msa0291090 MtrunA17_Chr3g0145181 28.529 333 220 9 345 669 12 334 4.54e-31 125
Msa0291090 MtrunA17_Chr3g0125421 26.934 349 212 8 373 691 27 362 1.19e-30 124
Msa0291090 MtrunA17_Chr7g0239091 27.660 282 187 4 399 678 174 440 1.84e-30 125
Msa0291090 MtrunA17_Chr4g0045461 28.012 332 205 9 382 690 26 346 2.47e-30 123
Msa0291090 MtrunA17_Chr3g0114871 32.510 243 146 6 371 603 31 265 2.68e-30 120
Msa0291090 MtrunA17_Chr3g0145201 29.032 310 202 9 368 669 670 969 3.07e-30 127
Msa0291090 MtrunA17_Chr3g0130391 28.530 347 200 11 348 669 37 360 5.80e-30 122
Msa0291090 MtrunA17_Chr3g0126761 36.667 180 104 3 493 670 42 213 6.83e-30 118
Msa0291090 MtrunA17_Chr3g0092531 28.479 309 187 9 382 676 6 294 7.46e-30 120
Msa0291090 MtrunA17_Chr7g0239071 28.676 272 181 4 404 670 19 282 2.80e-29 119
Msa0291090 MtrunA17_Chr4g0061581 29.032 341 214 12 12 339 16 341 8.45e-29 122
Msa0291090 MtrunA17_Chr8g0384481 25.915 328 217 6 373 686 50 365 4.38e-28 116
Msa0291090 MtrunA17_Chr2g0314371 26.230 305 185 9 345 618 16 311 1.16e-27 114
Msa0291090 MtrunA17_Chr4g0075471 39.130 138 75 3 519 655 9 138 2.76e-26 105
Msa0291090 MtrunA17_Chr5g0394071 34.463 177 102 2 493 669 1 163 5.30e-25 102
Msa0291090 MtrunA17_Chr8g0384461 25.000 352 226 10 341 672 6 339 1.04e-24 106
Msa0291090 MtrunA17_Chr1g0148771 25.449 334 205 10 374 692 55 359 1.10e-24 106
Msa0291090 MtrunA17_Chr7g0247741 27.707 314 207 7 373 679 2 302 1.39e-24 105
Msa0291090 MtrunA17_Chr1g0170631 33.168 202 119 6 493 688 1 192 2.25e-24 101
Msa0291090 MtrunA17_Chr6g0486831 26.888 331 203 10 375 676 7 327 2.56e-24 104
Msa0291090 MtrunA17_Chr2g0285931 24.419 344 182 12 382 687 28 331 3.18e-24 104
Msa0291090 MtrunA17_Chr8g0348951 28.660 321 185 11 381 679 4 302 3.24e-24 104
Msa0291090 MtrunA17_Chr4g0068891 27.302 315 203 8 386 687 18 319 3.82e-24 103
Msa0291090 MtrunA17_Chr5g0420881 36.667 150 86 4 541 688 2 144 5.04e-24 98.6
Msa0291090 MtrunA17_Chr1g0161101 40.571 175 88 3 476 649 342 501 6.80e-24 105
Msa0291090 MtrunA17_Chr1g0194321 27.457 346 187 13 382 692 20 336 2.17e-23 102
Msa0291090 MtrunA17_Chr8g0358941 24.691 324 207 8 382 687 27 331 6.69e-23 100
Msa0291090 MtrunA17_Chr5g0407731 25.641 312 181 12 382 675 33 311 1.08e-22 99.8
Msa0291090 MtrunA17_Chr2g0313111 27.007 274 142 10 381 626 27 270 1.42e-22 99.4
Msa0291090 MtrunA17_Chr3g0105281 26.154 260 163 7 382 628 34 277 1.66e-22 99.4
Msa0291090 MtrunA17_Chr1g0192821 25.352 355 225 11 21 360 28 357 6.73e-22 100
Msa0291090 MtrunA17_Chr1g0192821 28.139 231 148 6 60 285 15 232 6.21e-17 85.1
Msa0291090 MtrunA17_Chr1g0192821 31.319 182 121 4 15 194 122 301 9.76e-17 84.3
Msa0291090 MtrunA17_Chr1g0192821 27.273 154 104 4 14 166 175 321 2.09e-11 67.4
Msa0291090 MtrunA17_Chr3g0092581 31.977 172 107 3 507 676 3 166 9.98e-22 93.2
Msa0291090 MtrunA17_Chr8g0336841 48.276 87 40 2 603 688 9 91 1.34e-21 89.7
Msa0291090 MtrunA17_Chr1g0158011 31.982 222 138 7 473 689 49 262 1.44e-21 95.1
Msa0291090 MtrunA17_Chr4g0037611 39.683 126 73 3 505 628 1 125 1.98e-21 92.4
Msa0291090 MtrunA17_Chr4g0064771 30.890 191 116 5 475 663 13 189 4.42e-21 92.0
Msa0291090 MtrunA17_Chr7g0233661 36.220 127 68 1 543 669 24 137 7.83e-21 90.1
Msa0291090 MtrunA17_Chr4g0052251 24.412 340 186 11 382 687 29 331 1.24e-20 94.0
Msa0291090 MtrunA17_Chr8g0389941 26.688 311 175 9 398 674 45 336 3.67e-20 92.8
Msa0291090 MtrunA17_Chr4g0074871 29.577 213 147 3 31 240 292 504 1.99e-19 93.6
Msa0291090 MtrunA17_Chr4g0053251 26.780 295 168 13 381 640 7 288 1.89e-18 87.0
Msa0291090 MtrunA17_Chr5g0407781 23.418 316 191 11 381 678 4 286 3.08e-18 85.9
Msa0291090 MtrunA17_Chr2g0319521 36.792 106 67 0 498 603 19 124 6.42e-18 80.9
Msa0291090 MtrunA17_Chr4g0066851 26.860 242 148 9 24 247 158 388 9.59e-18 87.8
Msa0291090 MtrunA17_Chr4g0066851 25.203 246 167 8 9 240 83 325 6.38e-15 78.6
Msa0291090 MtrunA17_Chr4g0066851 25.103 243 155 8 60 289 84 312 9.83e-15 78.2
Msa0291090 MtrunA17_Chr7g0219991 42.593 108 58 3 496 601 249 354 1.15e-17 85.1
Msa0291090 MtrunA17_Chr4g0009541 24.233 326 212 12 379 686 4 312 1.57e-17 84.3
Msa0291090 MtrunA17_Chr4g0004071 29.670 182 119 5 495 675 125 298 2.00e-17 84.0
Msa0291090 MtrunA17_Chr2g0311611 48.571 70 29 1 541 603 2 71 2.54e-17 77.0
Msa0291090 MtrunA17_Chr1g0207821 28.409 264 160 9 36 273 87 347 2.20e-16 83.2
Msa0291090 MtrunA17_Chr2g0286241 27.136 199 124 6 24 211 150 338 6.14e-16 82.0
Msa0291090 MtrunA17_Chr2g0286241 26.293 232 156 7 21 240 89 317 1.91e-15 80.1
Msa0291090 MtrunA17_Chr1g0158021 26.724 232 159 7 369 595 36 261 7.52e-16 78.2
Msa0291090 MtrunA17_Chr2g0293931 28.571 203 129 5 495 687 7 203 1.04e-15 76.6
Msa0291090 MtrunA17_Chr8g0375581 50.820 61 29 1 541 600 26 86 2.17e-15 72.0
Msa0291090 MtrunA17_Chr4g0055911 24.765 319 201 10 377 674 4 304 2.76e-15 77.8
Msa0291090 MtrunA17_Chr7g0272641 29.442 197 130 6 24 215 245 437 3.74e-15 79.3
Msa0291090 MtrunA17_Chr7g0272641 25.097 259 175 5 20 270 186 433 4.00e-14 75.9
Msa0291090 MtrunA17_Chr7g0272641 23.913 276 165 14 52 310 170 417 2.74e-11 67.0
Msa0291090 MtrunA17_Chr1g0198221 27.863 262 158 10 61 307 8 253 4.37e-15 78.6
Msa0291090 MtrunA17_Chr4g0004061 27.957 186 118 6 495 675 125 299 1.56e-14 75.1
Msa0291090 MtrunA17_Chr1g0197401 28.571 175 118 5 20 191 88 258 2.74e-14 76.3
Msa0291090 MtrunA17_Chr1g0197401 24.681 235 161 4 20 240 27 259 4.75e-11 65.9
Msa0291090 MtrunA17_Chr4g0002171 28.063 253 145 12 20 241 120 366 8.79e-13 71.2
Msa0291090 MtrunA17_Chr4g0009561 23.026 304 201 12 399 686 29 315 1.01e-12 69.7
Msa0291090 MtrunA17_Chr4g0055871 22.581 310 205 9 384 674 6 299 1.10e-12 69.7
Msa0291090 MtrunA17_Chr3g0138351 23.179 302 202 10 399 686 29 314 1.36e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291090 AT3G07720.1 70.645 310 91 0 11 320 13 322 7.54e-164 474
Msa0291090 AT1G06620.1 55.153 359 155 3 331 688 12 365 6.79e-139 412
Msa0291090 AT2G30840.1 53.444 363 160 5 330 688 5 362 1.96e-129 387
Msa0291090 AT5G59540.1 50.811 370 175 4 322 688 1 366 9.21e-129 386
Msa0291090 AT2G30830.1 51.923 364 160 6 330 688 5 358 6.30e-127 380
Msa0291090 AT5G59530.1 52.174 368 166 6 325 688 3 364 1.63e-126 380
Msa0291090 AT2G25450.1 52.342 363 167 4 327 688 2 359 1.35e-124 375
Msa0291090 AT2G30840.3 52.617 363 157 6 330 688 5 356 4.22e-124 373
Msa0291090 AT1G03410.2 49.861 361 174 4 331 688 5 361 7.70e-124 373
Msa0291090 AT1G06650.2 49.067 375 162 7 329 688 9 369 1.42e-123 372
Msa0291090 AT1G03410.1 49.861 361 174 4 331 688 42 398 1.53e-123 374
Msa0291090 AT1G06640.1 48.942 378 170 6 323 688 3 369 2.60e-123 372
Msa0291090 AT1G04350.1 51.381 362 166 5 330 688 6 360 1.33e-122 370
Msa0291090 AT5G48180.1 54.375 320 142 3 9 326 7 324 3.73e-119 359
Msa0291090 AT3G61400.1 49.584 361 169 6 331 683 10 365 4.62e-119 361
Msa0291090 AT1G03400.1 48.189 359 173 3 331 688 5 351 5.08e-118 357
Msa0291090 AT1G06645.1 47.170 371 176 8 327 688 20 379 4.65e-114 348
Msa0291090 AT1G03400.2 44.703 387 173 4 331 688 5 379 1.79e-111 342
Msa0291090 AT5G43450.1 47.701 348 175 4 325 671 3 344 7.31e-111 339
Msa0291090 AT5G43440.1 45.722 374 187 7 322 688 1 365 1.64e-110 338
Msa0291090 AT1G06620.2 56.618 272 117 1 331 602 12 282 5.84e-110 334
Msa0291090 AT1G04380.1 45.924 368 175 5 322 688 1 345 1.04e-109 336
Msa0291090 AT3G16400.2 50.160 313 154 2 11 322 156 467 9.09e-105 327
Msa0291090 AT3G16400.1 50.160 313 154 2 11 322 156 467 9.09e-105 327
Msa0291090 AT2G30840.2 54.909 275 122 2 330 602 5 279 1.13e-103 319
Msa0291090 AT3G16410.1 49.201 313 157 2 11 322 305 616 3.86e-102 325
Msa0291090 AT2G33070.3 50.160 313 154 2 11 322 159 470 9.52e-102 320
Msa0291090 AT2G33070.1 50.160 313 154 2 11 322 157 468 1.33e-101 319
Msa0291090 AT2G33070.2 50.160 313 154 2 11 322 157 468 1.33e-101 319
Msa0291090 AT5G59540.2 50.704 284 138 2 322 603 1 284 1.01e-99 308
Msa0291090 AT3G16390.2 49.527 317 153 5 9 322 152 464 2.41e-99 313
Msa0291090 AT3G16390.1 49.527 317 153 5 9 322 152 464 2.41e-99 313
Msa0291090 AT1G06650.1 49.825 285 126 3 329 603 9 286 1.10e-96 301
Msa0291090 AT1G06640.2 47.557 307 137 4 323 612 3 302 5.50e-96 300
Msa0291090 AT1G06640.3 48.797 291 132 3 323 603 3 286 2.27e-95 296
Msa0291090 AT3G61400.2 50.000 280 132 4 331 603 10 288 4.39e-94 293
Msa0291090 AT5G43450.2 47.203 286 148 2 325 609 3 286 2.55e-90 283
Msa0291090 AT1G54040.3 45.399 326 156 6 15 322 11 332 2.05e-89 283
Msa0291090 AT1G54040.2 45.399 326 156 6 15 322 17 338 4.65e-89 282
Msa0291090 AT5G43440.2 46.021 289 151 4 322 607 1 287 1.22e-88 279
Msa0291090 AT1G04380.2 45.070 284 137 3 322 605 1 265 2.70e-83 265
Msa0291090 AT1G54040.1 45.038 262 123 5 78 322 1 258 8.68e-70 229
Msa0291090 AT3G13610.1 34.524 336 199 9 345 674 26 346 3.45e-58 201
Msa0291090 AT1G55290.1 34.218 339 197 10 345 674 25 346 6.15e-55 192
Msa0291090 AT4G10500.1 36.218 312 185 6 381 687 43 345 5.50e-54 189
Msa0291090 AT2G36690.2 35.207 338 198 8 345 672 20 346 1.15e-53 189
Msa0291090 AT2G36690.1 35.207 338 198 8 345 672 20 346 1.15e-53 189
Msa0291090 AT5G24530.1 35.000 300 182 4 383 678 39 329 4.35e-53 186
Msa0291090 AT4G10490.1 34.915 295 178 5 381 670 41 326 1.15e-52 186
Msa0291090 AT3G12900.1 32.432 333 210 8 345 674 21 341 3.45e-52 184
Msa0291090 AT5G05600.1 31.302 361 229 9 326 677 7 357 7.10e-52 184
Msa0291090 AT2G38240.1 32.353 340 208 10 339 669 5 331 8.22e-49 175
Msa0291090 AT3G11180.2 29.551 379 238 9 313 677 23 386 3.85e-45 166
Msa0291090 AT3G11180.1 29.551 379 238 9 313 677 23 386 5.21e-45 166
Msa0291090 AT2G44800.1 31.232 349 227 6 332 676 2 341 2.76e-43 160
Msa0291090 AT4G16330.2 33.443 305 177 7 381 677 66 352 1.39e-42 158
Msa0291090 AT3G19000.1 31.366 322 170 9 382 673 32 332 3.22e-42 157
Msa0291090 AT3G51240.1 33.852 257 159 4 382 630 38 291 1.93e-41 155
Msa0291090 AT3G55970.1 29.972 357 224 12 336 677 4 349 3.68e-41 154
Msa0291090 AT3G21420.1 32.591 359 217 9 346 690 17 364 2.31e-40 152
Msa0291090 AT1G78550.1 27.729 339 225 8 351 682 24 349 2.63e-40 152
Msa0291090 AT5G08640.2 31.090 312 181 8 381 678 42 333 2.64e-40 151
Msa0291090 AT5G08640.1 31.090 312 181 8 381 678 42 333 2.64e-40 151
Msa0291090 AT4G25420.1 30.226 354 219 6 337 672 11 354 3.88e-40 152
Msa0291090 AT1G17020.1 29.395 347 225 10 345 682 16 351 1.42e-39 149
Msa0291090 AT1G77330.1 31.579 266 156 8 380 631 1 254 3.04e-39 147
Msa0291090 AT4G22880.1 29.360 344 220 10 346 674 7 342 4.07e-39 148
Msa0291090 AT4G22880.2 29.360 344 220 10 346 674 7 342 4.07e-39 148
Msa0291090 AT4G22880.3 29.360 344 220 10 346 674 7 342 4.07e-39 148
Msa0291090 AT1G62380.1 30.844 308 180 9 380 674 5 292 7.95e-39 146
Msa0291090 AT3G60290.1 31.138 334 217 5 349 678 19 343 8.33e-39 147
Msa0291090 AT5G05600.2 31.010 287 186 7 326 603 7 290 1.37e-38 145
Msa0291090 AT1G17010.1 27.954 347 230 8 345 682 16 351 2.73e-38 146
Msa0291090 AT1G05010.1 30.921 304 190 10 381 674 3 296 4.12e-38 144
Msa0291090 AT1G60980.1 29.032 372 226 7 320 671 5 358 1.74e-37 144
Msa0291090 AT1G12010.1 28.479 309 188 9 380 675 5 293 2.17e-37 142
Msa0291090 AT4G25310.1 30.000 290 182 7 401 682 70 346 2.43e-37 143
Msa0291090 AT5G63590.1 32.573 307 181 9 374 669 6 297 4.75e-37 141
Msa0291090 AT3G19010.1 29.870 308 180 8 377 662 23 316 3.50e-36 140
Msa0291090 AT3G19010.4 29.870 308 180 8 377 662 23 316 3.50e-36 140
Msa0291090 AT4G25300.1 26.957 345 235 8 345 682 15 349 6.09e-36 139
Msa0291090 AT5G07480.1 30.721 319 192 9 375 678 38 342 1.36e-35 138
Msa0291090 AT5G63600.1 32.013 303 175 9 378 670 29 310 7.49e-35 135
Msa0291090 AT5G20400.1 29.126 309 203 6 373 675 36 334 1.26e-34 135
Msa0291090 AT5G07200.1 29.641 334 210 7 334 654 14 335 1.98e-34 135
Msa0291090 AT4G21200.1 29.321 324 193 6 351 669 21 313 1.03e-33 132
Msa0291090 AT5G63600.2 31.908 304 175 10 378 670 29 311 1.35e-33 132
Msa0291090 AT1G49390.1 27.299 348 232 6 333 674 3 335 3.75e-33 131
Msa0291090 AT4G25420.2 30.796 289 179 5 337 607 11 296 6.59e-33 129
Msa0291090 AT5G12270.1 30.492 305 184 8 382 674 56 344 7.96e-33 130
Msa0291090 AT1G78550.2 27.437 277 184 6 413 682 5 271 8.42e-33 128
Msa0291090 AT3G19010.3 28.859 298 166 8 377 662 23 286 1.20e-32 129
Msa0291090 AT1G50960.1 30.451 266 179 5 365 628 25 286 1.89e-32 129
Msa0291090 AT3G19000.2 32.143 252 127 8 382 603 32 269 3.17e-32 126
Msa0291090 AT1G80330.1 30.380 316 173 11 381 674 48 338 8.33e-32 127
Msa0291090 AT5G51810.1 29.836 305 191 5 379 672 60 352 1.31e-31 127
Msa0291090 AT1G15550.1 28.882 322 179 13 381 679 56 350 1.89e-31 126
Msa0291090 AT5G20550.1 28.904 301 199 6 369 662 32 324 2.90e-31 125
Msa0291090 AT4G16330.1 34.123 211 124 4 471 677 47 246 7.13e-31 122
Msa0291090 AT1G18610.1 28.869 336 209 8 19 337 23 345 1.01e-30 127
Msa0291090 AT1G18610.1 28.302 265 164 7 66 320 18 266 7.23e-17 84.7
Msa0291090 AT1G18610.2 28.869 336 209 8 19 337 23 345 1.01e-30 127
Msa0291090 AT1G18610.2 28.302 265 164 7 66 320 18 266 7.23e-17 84.7
Msa0291090 AT3G55970.2 30.035 283 181 9 336 604 4 283 1.96e-30 122
Msa0291090 AT5G54000.2 28.621 290 193 5 379 662 43 324 4.12e-30 122
Msa0291090 AT2G19590.1 27.957 279 180 10 379 648 8 274 1.03e-29 120
Msa0291090 AT3G51240.2 35.519 183 112 2 454 630 25 207 1.48e-29 119
Msa0291090 AT5G63595.1 27.458 295 166 7 374 652 17 279 4.11e-29 117
Msa0291090 AT1G80340.1 29.063 320 180 10 374 673 42 334 2.23e-28 117
Msa0291090 AT1G74150.3 26.230 366 237 8 19 374 20 362 7.10e-28 119
Msa0291090 AT1G74150.3 27.306 271 171 7 62 322 11 265 1.40e-15 80.9
Msa0291090 AT1G74150.3 26.222 225 155 6 15 230 69 291 5.70e-14 75.9
Msa0291090 AT5G51810.2 31.381 239 148 4 379 606 60 293 1.61e-27 113
Msa0291090 AT1G74150.1 26.431 367 236 9 19 374 20 363 7.05e-27 116
Msa0291090 AT1G74150.1 27.306 271 171 7 62 322 11 265 1.22e-15 80.9
Msa0291090 AT1G74150.1 26.222 225 155 6 15 230 69 291 5.40e-14 75.9
Msa0291090 AT1G74150.1 32.164 171 101 6 10 166 112 281 9.68e-11 65.5
Msa0291090 AT1G74150.2 26.431 367 236 9 19 374 20 363 8.26e-27 115
Msa0291090 AT1G74150.2 27.306 271 171 7 62 322 11 265 1.38e-15 80.9
Msa0291090 AT1G74150.2 26.222 225 155 6 15 230 69 291 6.07e-14 75.5
Msa0291090 AT4G23340.1 28.571 315 203 8 373 679 1 301 1.21e-26 111
Msa0291090 AT3G19010.2 30.952 252 141 10 377 604 23 265 3.82e-26 109
Msa0291090 AT5G54000.1 28.968 252 165 5 417 662 1 244 7.59e-26 108
Msa0291090 AT1G49390.2 28.030 264 176 5 417 674 1 256 1.34e-25 107
Msa0291090 AT5G43935.1 28.231 294 182 10 382 673 19 285 2.47e-25 107
Msa0291090 AT4G21690.1 28.049 328 168 11 382 676 47 339 9.83e-25 106
Msa0291090 AT1G30040.1 27.077 325 195 12 381 687 30 330 1.81e-24 105
Msa0291090 AT4G25300.2 31.217 189 121 3 496 682 74 255 2.54e-24 103
Msa0291090 AT1G78440.1 27.160 324 197 11 382 687 18 320 2.71e-24 105
Msa0291090 AT2G19590.2 28.279 244 156 9 414 648 26 259 3.37e-24 103
Msa0291090 AT5G63580.2 30.870 230 145 6 381 603 18 240 1.81e-23 100
Msa0291090 AT5G63580.1 31.858 226 140 7 381 599 18 236 2.65e-23 100
Msa0291090 AT1G44090.1 26.627 338 218 9 332 656 20 340 2.67e-23 103
Msa0291090 AT4G25310.2 24.913 289 170 7 401 682 70 318 6.75e-23 100
Msa0291090 AT5G07480.2 32.161 199 116 6 489 678 45 233 3.25e-22 97.1
Msa0291090 AT1G74150.4 26.061 330 209 8 56 374 42 347 4.38e-22 101
Msa0291090 AT1G74150.4 26.222 225 155 6 15 230 53 275 2.33e-14 77.0
Msa0291090 AT1G74150.4 32.051 156 99 4 12 161 100 254 5.94e-11 66.2
Msa0291090 AT4G23340.2 33.684 190 111 5 498 679 1 183 5.64e-22 95.1
Msa0291090 AT1G47990.1 26.706 337 182 12 382 687 15 317 4.04e-21 95.5
Msa0291090 AT2G34555.1 25.767 326 195 10 382 687 27 325 9.30e-21 94.7
Msa0291090 AT1G14120.2 26.537 309 194 9 382 680 8 293 1.56e-19 90.5
Msa0291090 AT1G14120.1 26.537 309 194 9 382 680 8 293 1.56e-19 90.5
Msa0291090 AT1G14120.3 26.537 309 194 9 382 680 8 293 1.56e-19 90.5
Msa0291090 AT5G51310.1 25.538 325 196 10 380 679 3 306 1.78e-19 90.5
Msa0291090 AT5G18590.2 28.390 236 152 7 24 247 140 370 4.98e-19 92.0
Msa0291090 AT5G18590.2 25.806 248 169 5 6 240 62 307 1.74e-16 84.0
Msa0291090 AT5G18590.2 25.087 287 177 10 16 288 32 294 6.54e-15 79.0
Msa0291090 AT5G18590.1 28.390 236 152 7 24 247 140 370 4.98e-19 92.0
Msa0291090 AT5G18590.1 25.806 248 169 5 6 240 62 307 1.74e-16 84.0
Msa0291090 AT5G18590.1 25.087 287 177 10 16 288 32 294 6.54e-15 79.0
Msa0291090 AT1G14130.1 25.597 293 187 9 382 665 9 279 6.78e-19 88.6
Msa0291090 AT1G02400.1 28.235 340 200 16 371 689 13 329 6.99e-19 89.0
Msa0291090 AT5G58660.1 25.279 269 156 9 380 616 32 287 1.46e-18 88.2
Msa0291090 AT2G06960.1 35.714 140 65 4 539 676 29 145 2.95e-17 79.7
Msa0291090 AT3G46500.5 27.491 291 184 8 404 676 34 315 3.69e-17 83.6
Msa0291090 AT3G05420.1 27.652 264 167 7 20 270 183 435 2.29e-16 83.6
Msa0291090 AT3G05420.1 25.448 279 170 13 48 310 163 419 3.83e-12 70.1
Msa0291090 AT3G05420.2 27.652 264 167 7 20 270 184 436 2.33e-16 83.6
Msa0291090 AT3G05420.2 25.448 279 170 13 48 310 164 420 3.77e-12 70.1
Msa0291090 AT3G46490.1 27.103 321 195 10 378 674 15 320 3.07e-16 80.9
Msa0291090 AT4G04670.1 32.099 162 105 3 2 161 355 513 3.83e-16 83.2
Msa0291090 AT4G04670.1 26.339 224 158 4 20 240 324 543 8.97e-16 82.0
Msa0291090 AT4G04670.1 28.000 175 121 3 69 240 321 493 3.40e-11 67.4
Msa0291090 AT3G47190.1 23.622 254 164 7 380 616 30 270 3.26e-15 77.8
Msa0291090 AT5G50310.1 26.336 262 158 8 30 269 94 342 4.42e-15 79.3
Msa0291090 AT5G04420.2 29.004 231 150 8 20 240 101 327 4.98e-15 79.0
Msa0291090 AT5G04420.1 29.004 231 150 8 20 240 101 327 4.98e-15 79.0
Msa0291090 AT5G04420.3 29.004 231 150 8 20 240 101 327 4.98e-15 79.0
Msa0291090 AT3G46490.2 28.302 265 159 8 378 618 15 272 1.09e-14 76.3
Msa0291090 AT1G52820.1 25.668 187 124 5 495 677 128 303 1.11e-14 76.3
Msa0291090 AT2G36360.4 27.586 261 160 8 61 307 8 253 3.23e-14 76.3
Msa0291090 AT2G36360.3 27.586 261 160 8 61 307 8 253 3.75e-14 76.3
Msa0291090 AT2G36360.2 27.586 261 160 8 61 307 8 253 3.80e-14 75.9
Msa0291090 AT2G36360.1 27.586 261 160 8 61 307 8 253 3.80e-14 75.9
Msa0291090 AT4G16765.6 28.125 192 121 6 492 674 57 240 2.34e-13 70.9
Msa0291090 AT4G16765.1 28.125 192 121 6 492 674 57 240 2.34e-13 70.9
Msa0291090 AT4G16765.2 28.125 192 121 6 492 674 57 240 2.34e-13 70.9
Msa0291090 AT5G27630.2 25.379 264 173 6 20 270 184 436 3.51e-13 73.2
Msa0291090 AT5G27630.2 25.263 285 173 14 47 310 155 420 2.46e-11 67.4
Msa0291090 AT3G46500.7 26.437 261 171 7 375 617 7 264 3.54e-13 71.2
Msa0291090 AT5G27630.4 25.379 264 173 6 20 270 184 436 4.39e-13 73.2
Msa0291090 AT5G27630.4 25.263 285 173 14 47 310 155 420 1.93e-11 67.8
Msa0291090 AT5G27630.3 25.758 264 172 8 20 270 184 436 4.74e-13 73.2
Msa0291090 AT5G27630.3 25.614 285 172 15 47 310 155 420 1.86e-11 67.8
Msa0291090 AT5G27630.1 25.379 264 173 6 20 270 184 436 4.79e-13 72.8
Msa0291090 AT5G27630.1 25.614 285 172 15 47 310 155 420 2.02e-11 67.8
Msa0291090 AT1G35190.1 25.228 329 202 12 375 674 2 315 9.81e-13 70.5
Msa0291090 AT4G16765.3 29.050 179 110 6 492 661 57 227 1.40e-12 68.6
Msa0291090 AT1G51550.1 27.888 251 146 12 21 241 123 368 2.12e-12 70.5
Msa0291090 AT2G36360.5 26.667 270 160 9 61 307 8 262 5.18e-12 69.3
Msa0291090 AT1G68050.1 27.928 222 141 11 55 265 287 500 7.03e-12 69.3
Msa0291090 AT1G68050.1 26.190 336 205 18 15 326 299 615 8.33e-11 65.9
Msa0291090 AT4G16765.5 32.031 128 74 4 552 674 75 194 1.56e-11 64.7
Msa0291090 AT3G50210.2 28.750 160 107 4 484 636 49 208 5.35e-11 63.9

Find 190 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCACCACCCATTTCTTTA+AGG 0.090436 2_3:-39249016 None:intergenic
CAGGAAGGCTCAATGATTTA+TGG 0.247369 2_3:+39246958 Msa0291090:CDS
GTCTTGATAAAGAGTAAAAT+TGG 0.254512 2_3:-39248276 None:intergenic
CTTTAAGGTGAAAGCGATTA+AGG 0.259578 2_3:-39249001 None:intergenic
TCCTCACCTTGGCATCTTGC+TGG 0.259911 2_3:-39248208 None:intergenic
GGAGAAACCATCTATGTATT+TGG 0.275442 2_3:+39246768 Msa0291090:CDS
TGGAATTCCAGTTCATGTTT+TGG 0.293851 2_3:+39248154 Msa0291090:CDS
ATGAACTACCACCGGTTTGC+AGG 0.303739 2_3:+39248360 Msa0291090:CDS
TCGCTTTCACCTTAAAGAAA+TGG 0.311659 2_3:+39249007 Msa0291090:CDS
GGACAGAAGGTTTATGCATT+TGG 0.314362 2_3:+39246612 Msa0291090:CDS
CGTGGGTGGTGCGCATTTGC+CGG 0.322365 2_3:+39247377 Msa0291090:CDS
ACGTGGCGGCGGTGTGTTCC+CGG 0.327871 2_3:-39246721 None:intergenic
TTGACACTAAAACCAACAAT+TGG 0.329490 2_3:+39246835 Msa0291090:CDS
TTCAAAATGCAAGTGAGAAA+TGG 0.333502 2_3:+39248108 Msa0291090:CDS
AAAGAAGTATCTCTATATAT+TGG 0.335206 2_3:-39249906 None:intergenic
AGGGTTGCAGCTGAAATTCT+TGG 0.338039 2_3:-39249798 None:intergenic
GGTGGTAGTTCATCAGCTTT+AGG 0.343905 2_3:-39248350 None:intergenic
TTGATTGGTCCAATCACTTT+CGG 0.348600 2_3:-39249858 None:intergenic
ATTGATTTACCTCCCATTCA+TGG 0.351377 2_3:+39249188 Msa0291090:CDS
ACATGTAACTTGTTATCAAC+GGG 0.356661 2_3:-39246657 None:intergenic
TCAAAATGCAAGTGAGAAAT+GGG 0.362845 2_3:+39248109 Msa0291090:CDS
CGCTTTCACCTTAAAGAAAT+GGG 0.363801 2_3:+39249008 Msa0291090:CDS
GGGAAACACATAATTGTATA+TGG 0.366421 2_3:+39247218 Msa0291090:CDS
GTCCAAGGACTCATAGAAAA+TGG 0.369194 2_3:+39247933 Msa0291090:CDS
TCAGATAAAAGTTCCTTGAT+TGG 0.373452 2_3:-39249873 None:intergenic
GATTGTCATGAAGAATTTGT+AGG 0.378688 2_3:-39249160 None:intergenic
ATCTCATCCAAAACATGAAC+TGG 0.379921 2_3:-39248161 None:intergenic
GTCCCTACAATTGACTTAAC+AGG 0.381724 2_3:+39248041 Msa0291090:CDS
GCGCACCACCCACGTGGCCC+TGG 0.395028 2_3:-39247368 None:intergenic
TGGTCAGTAGCCGATGTATC+CGG 0.396432 2_3:+39246702 Msa0291090:CDS
TCTTCCACCAAATACATAGA+TGG 0.400451 2_3:-39246775 None:intergenic
TGGTTGTAAATGTGGTGAAT+TGG 0.400598 2_3:+39245550 Msa0291090:CDS
TACTTCTTTGAAAGAGTACT+TGG 0.401648 2_3:+39249920 Msa0291090:CDS
ATCAAGACCAATCTGCTGAT+TGG 0.402608 2_3:+39248291 Msa0291090:CDS
TGATTTCAAGTGGAGATGTT+GGG 0.404218 2_3:+39246862 Msa0291090:CDS
ATTCCTGTTAAGTCAATTGT+AGG 0.415919 2_3:-39248044 None:intergenic
CCCTGGGCCACTGTTAGGCC+CGG 0.416654 2_3:-39247053 None:intergenic
GGTTGTAAATGTGGTGAATT+GGG 0.420530 2_3:+39245551 Msa0291090:CDS
TTCTTTCAAGTAATAAATCA+TGG 0.422804 2_3:+39248134 Msa0291090:CDS
TGACGTGCATTTCTTCGATC+TGG 0.423289 2_3:+39247118 Msa0291090:CDS
AGGAAGGCTCAATGATTTAT+GGG 0.428980 2_3:+39246959 Msa0291090:CDS
TTCTTTGTGTAACAACTTGA+AGG 0.437775 2_3:-39249985 None:intergenic
TTGATTTCAAGTGGAGATGT+TGG 0.441999 2_3:+39246861 Msa0291090:CDS
GGGTTGCAGCTGAAATTCTT+GGG 0.452145 2_3:-39249797 None:intergenic
CCCATGTGACCTTGGTCACT+AGG 0.452252 2_3:-39247254 None:intergenic
TTGCAAGGGAAGAGGTGGGC+CGG 0.453359 2_3:+39247034 Msa0291090:CDS
ACAACTTCATCTCTCAAAAC+AGG 0.453932 2_3:-39248077 None:intergenic
CTGACCATGTCAAGGTATCT+AGG 0.455547 2_3:-39246686 None:intergenic
TGAAATCAAGGCCCAATTGT+TGG 0.455604 2_3:-39246847 None:intergenic
TCACATGCTATTGCTGTAGT+AGG 0.455781 2_3:+39246591 Msa0291090:CDS
GCCGGGCCTAACAGTGGCCC+AGG 0.464383 2_3:+39247052 Msa0291090:CDS
TTGGACGATAAGGTGGAATC+AGG 0.467150 2_3:+39247338 Msa0291090:CDS
TAAGCCCACTTGTTTCCACT+TGG 0.467507 2_3:-39247157 None:intergenic
GAGGGCATACCGAAAGTGAT+TGG 0.468761 2_3:+39249849 Msa0291090:CDS
TGACACTAAAACCAACAATT+GGG 0.468892 2_3:+39246836 Msa0291090:CDS
TCATCAGCTTTAGGAGGATC+GGG 0.470689 2_3:-39248341 None:intergenic
TGCAAGGGAAGAGGTGGGCC+GGG 0.474673 2_3:+39247035 Msa0291090:CDS
TTCATCAGCTTTAGGAGGAT+CGG 0.475741 2_3:-39248342 None:intergenic
TTTGGTGGCTGTGGAGTGGC+AGG 0.477833 2_3:+39246939 Msa0291090:CDS
ATGGACGAGGTTGGACGATA+AGG 0.477851 2_3:+39247328 Msa0291090:CDS
CAAGAGGGATTATTAGTGTA+TGG 0.478956 2_3:+39247416 Msa0291090:CDS
CTTCCCTTGCAACTTTCACC+AGG 0.479391 2_3:-39247023 None:intergenic
CACTACAAGAGCTCCATGAA+TGG 0.483845 2_3:-39249201 None:intergenic
AACATCTCCACTTGAAATCA+AGG 0.485982 2_3:-39246859 None:intergenic
CCTATGGTTAACTCTGGCTC+AGG 0.486491 2_3:-39249077 None:intergenic
AACACATAATTGTATATGGT+GGG 0.491224 2_3:+39247222 Msa0291090:CDS
GAATTTGATGAGTCAAAGGT+TGG 0.494931 2_3:+39247909 Msa0291090:CDS
GTTAACTCTGGCTCAGGGCA+TGG 0.496528 2_3:-39249071 None:intergenic
TTTATGGGCCTTTGATGTTG+TGG 0.497159 2_3:+39246974 Msa0291090:CDS
ATCACTTTCGGTATGCCCTC+AGG 0.497336 2_3:-39249846 None:intergenic
CCCTAGTGACCAAGGTCACA+TGG 0.498673 2_3:+39247253 Msa0291090:CDS
TGAGTGCTTGGTAGTGCCTA+TGG 0.499149 2_3:-39249093 None:intergenic
TGTGTATGGTTTCGCTGGAA+TGG 0.500991 2_3:+39247088 Msa0291090:CDS
GTGGAATCAGGTGATCATCC+AGG 0.503333 2_3:+39247350 Msa0291090:CDS
TGGGTGGAATTTCCATCTCC+TGG 0.503407 2_3:+39247005 Msa0291090:CDS
GAAAGTGATTGGACCAATCA+AGG 0.505959 2_3:+39249860 Msa0291090:CDS
ATCATCCAGGGCCACGTGGG+TGG 0.507358 2_3:+39247363 Msa0291090:CDS
TTGCAACTTTCACCAGGAGA+TGG 0.508173 2_3:-39247017 None:intergenic
CAGAAGGTTTATGCATTTGG+CGG 0.511271 2_3:+39246615 Msa0291090:CDS
GAACAATCTAATATCAATCA+TGG 0.512601 2_3:+39247987 Msa0291090:CDS
GACCAAGGTCACATGGGTGC+TGG 0.513231 2_3:+39247260 Msa0291090:CDS
AAAGCTAGCATCTGAGTGCT+TGG 0.513732 2_3:-39249105 None:intergenic
CACATGTAACTTGTTATCAA+CGG 0.514174 2_3:-39246658 None:intergenic
AACACACCGCCGCCACGTGT+TGG 0.515632 2_3:+39246726 Msa0291090:CDS
TGAATACACAAAAGAAGTAA+TGG 0.519577 2_3:+39248935 Msa0291090:CDS
ACAAAAGAAGTAATGGAACT+TGG 0.521561 2_3:+39248942 Msa0291090:CDS
AAAGGAATTTGATGAGTCAA+AGG 0.522155 2_3:+39247905 Msa0291090:CDS
GGTCAGTAGCCGATGTATCC+GGG 0.522496 2_3:+39246703 Msa0291090:CDS
TGTCCCTCCAATCAGCAGAT+TGG 0.523116 2_3:-39248298 None:intergenic
GAGTTATTGTCAGAAGCTCT+TGG 0.524714 2_3:+39248978 Msa0291090:CDS
ATTAAGACAAACCTGCAAAC+CGG 0.524849 2_3:-39248371 None:intergenic
ACTACAAGAGCTCCATGAAT+GGG 0.524949 2_3:-39249200 None:intergenic
CCATGTGACCTTGGTCACTA+GGG 0.525844 2_3:-39247253 None:intergenic
GTGGCTGTGGAGTGGCAGGA+AGG 0.527333 2_3:+39246943 Msa0291090:CDS
AAGCCCACTTGTTTCCACTT+GGG 0.532207 2_3:-39247156 None:intergenic
TGGGTTGTGTATGGTTTCGC+TGG 0.532785 2_3:+39247083 Msa0291090:CDS
GCAAGATGCCAAGGTGAGGA+AGG 0.534102 2_3:+39248211 Msa0291090:CDS
ATGGAGTGGTAGCTACGGTT+AGG 0.534804 2_3:-39246888 None:intergenic
ACGTCGGTCATCGGCAGTCA+TGG 0.536504 2_3:-39246907 None:intergenic
GACACTATCATGGACGAGGT+TGG 0.537344 2_3:+39247319 Msa0291090:CDS
AAGACCAATCTGCTGATTGG+AGG 0.540908 2_3:+39248294 Msa0291090:CDS
TTGGCTGCCTCGGCTAGCAC+CGG 0.541808 2_3:-39247396 None:intergenic
GAGTCAAAGGTTGGTGTCCA+AGG 0.541962 2_3:+39247918 Msa0291090:CDS
AAATTCTTCATGACAATCAG+TGG 0.543081 2_3:+39249165 Msa0291090:CDS
CTTGCCATCCACAACATCAA+AGG 0.543652 2_3:-39246982 None:intergenic
ATAATCCCTCTTGGCTGCCT+CGG 0.546368 2_3:-39247406 None:intergenic
TGGGCCTTTGATGTTGTGGA+TGG 0.546782 2_3:+39246978 Msa0291090:CDS
CTCTCAAAACAGGATCATCA+TGG 0.547021 2_3:-39248067 None:intergenic
GACCAGCACCCATGTGACCT+TGG 0.549010 2_3:-39247262 None:intergenic
GGTGAAAGTTGCAAGGGAAG+AGG 0.549168 2_3:+39247026 Msa0291090:CDS
GAAGTATCTCTATATATTGG+TGG 0.551662 2_3:-39249903 None:intergenic
TCATCAAGCCTGTCGTTGCT+AGG 0.553094 2_3:-39247449 None:intergenic
GAAAGTTGCAAGGGAAGAGG+TGG 0.555227 2_3:+39247029 Msa0291090:CDS
AATTGGGCCTTGATTTCAAG+TGG 0.556457 2_3:+39246852 Msa0291090:CDS
TTGTTTCAGCTTGATCAAAG+AGG 0.556708 2_3:+39246546 Msa0291090:intron
GAAACCATCTATGTATTTGG+TGG 0.556915 2_3:+39246771 Msa0291090:CDS
AACATACACACGTCGGTCAT+CGG 0.557266 2_3:-39246916 None:intergenic
AACAAGTTGAAAACACACTA+CGG 0.558479 2_3:-39247190 None:intergenic
GCTAGCCGAGGCAGCCAAGA+GGG 0.561545 2_3:+39247401 Msa0291090:CDS
AAGTATCTCTATATATTGGT+GGG 0.564452 2_3:-39249902 None:intergenic
TTGATGTTGTGGATGGCAAG+TGG 0.565683 2_3:+39246985 Msa0291090:CDS
TGGTTTCGCTGGAATGGAAG+TGG 0.566273 2_3:+39247094 Msa0291090:CDS
GAACATTGGAGATCTTCTAC+AGG 0.566435 2_3:+39249223 Msa0291090:CDS
ATCTCCTGGTGAAAGTTGCA+AGG 0.567843 2_3:+39247019 Msa0291090:CDS
CATACACTAATAATCCCTCT+TGG 0.571128 2_3:-39247415 None:intergenic
TTCCTGTTAAGTCAATTGTA+GGG 0.572686 2_3:-39248043 None:intergenic
GGAGCTCTTGTAGTGAACAT+TGG 0.576553 2_3:+39249209 Msa0291090:CDS
GAAAATGATCATTCTCCTGA+GGG 0.577604 2_3:+39249831 Msa0291090:CDS
TGATGTTGTGGATGGCAAGT+GGG 0.578551 2_3:+39246986 Msa0291090:CDS
GTAGTGCCTATGGTTAACTC+TGG 0.578696 2_3:-39249083 None:intergenic
AATGAGAGTGGTTGTAAATG+TGG 0.582514 2_3:+39245542 None:intergenic
AGACCAATCTGCTGATTGGA+GGG 0.584002 2_3:+39248295 Msa0291090:CDS
ATAGTACTCCTTCCTCACCT+TGG 0.587132 2_3:-39248219 None:intergenic
GCAACTCACCTAGCAACGAC+AGG 0.588373 2_3:+39247441 Msa0291090:CDS
GTGACACCAACACGTGGCGG+CGG 0.589766 2_3:-39246732 None:intergenic
CGGTGTGTTCCCGGATACAT+CGG 0.590304 2_3:-39246712 None:intergenic
CCGGGCCTAACAGTGGCCCA+GGG 0.590476 2_3:+39247053 Msa0291090:CDS
TATTGCTGTAGTAGGACAGA+AGG 0.590763 2_3:+39246599 Msa0291090:CDS
TAAAGCTGATGAACTACCAC+CGG 0.591747 2_3:+39248352 Msa0291090:CDS
AGGTGGGCCGGGCCTAACAG+TGG 0.595141 2_3:+39247046 Msa0291090:CDS
GAAAACACACTACGGGCCGT+TGG 0.595615 2_3:-39247182 None:intergenic
ACAAGTTGAAAACACACTAC+GGG 0.597063 2_3:-39247189 None:intergenic
AAACACATAATTGTATATGG+TGG 0.598952 2_3:+39247221 Msa0291090:CDS
GACGAGGTTGGACGATAAGG+TGG 0.598960 2_3:+39247331 Msa0291090:CDS
ACACATAATTGTATATGGTG+GGG 0.601078 2_3:+39247223 Msa0291090:CDS
GATCAAAGAGGAATCTTGCA+AGG 0.605041 2_3:+39246558 Msa0291090:CDS
GAGTGGTAGCTACGGTTAGG+AGG 0.607165 2_3:-39246885 None:intergenic
CTATGGTTAACTCTGGCTCA+GGG 0.607343 2_3:-39249076 None:intergenic
ACTAACTTTGAGCAAGAGCA+AGG 0.608068 2_3:-39247481 None:intergenic
GGTAGTTCATCAGCTTTAGG+AGG 0.608431 2_3:-39248347 None:intergenic
AACAAGTGGGCTTAAACCAA+CGG 0.609427 2_3:+39247166 Msa0291090:CDS
TAGACACGGAGACACTATCA+TGG 0.609879 2_3:+39247309 Msa0291090:CDS
GCATTTGCCGGTGCTAGCCG+AGG 0.611791 2_3:+39247389 Msa0291090:CDS
GAAATAGACCCTAGTGACCA+AGG 0.612642 2_3:+39247245 Msa0291090:CDS
CGGAGACACTATCATGGACG+AGG 0.615534 2_3:+39247315 Msa0291090:CDS
GGTGTCACGATGGCTGCAGT+TGG 0.615550 2_3:+39246747 Msa0291090:CDS
TGGAATCAGGTGATCATCCA+GGG 0.616772 2_3:+39247351 Msa0291090:CDS
TTGTTATCAACGGGGACACG+TGG 0.620860 2_3:-39246648 None:intergenic
ACCAGCAAGATGCCAAGGTG+AGG 0.623160 2_3:+39248207 Msa0291090:CDS
ATTTCACCAGCAAGATGCCA+AGG 0.623273 2_3:+39248202 Msa0291090:CDS
TCTCCTGGTGAAAGTTGCAA+GGG 0.623404 2_3:+39247020 Msa0291090:CDS
CCTGAGCCAGAGTTAACCAT+AGG 0.624567 2_3:+39249077 Msa0291090:CDS
TGTTGTGGATGGCAAGTGGG+TGG 0.625429 2_3:+39246989 Msa0291090:CDS
ATACTAAACAATAATGAGAG+TGG 0.626837 2_3:+39245530 None:intergenic
TGGGCCCAAGTGGAAACAAG+TGG 0.628859 2_3:+39247152 Msa0291090:CDS
GTGATCATCCAGGGCCACGT+GGG 0.629702 2_3:+39247360 Msa0291090:CDS
AACTCTGGCTCAGGGCATGG+TGG 0.629830 2_3:-39249068 None:intergenic
TCTTTGTGTAACAACTTGAA+GGG 0.632223 2_3:-39249984 None:intergenic
CAGTCATGGAGTGGTAGCTA+CGG 0.640561 2_3:-39246893 None:intergenic
GGTGATCATCCAGGGCCACG+TGG 0.641702 2_3:+39247359 Msa0291090:CDS
AGAAAATGATCATTCTCCTG+AGG 0.644730 2_3:+39249830 Msa0291090:CDS
ATCGGCTACTGACCATGTCA+AGG 0.646523 2_3:-39246694 None:intergenic
CCTAGTGACCAAGGTCACAT+GGG 0.649054 2_3:+39247254 Msa0291090:CDS
GGTCATCGGCAGTCATGGAG+TGG 0.651183 2_3:-39246902 None:intergenic
TGTTCACAATAGAACATGCG+TGG 0.652888 2_3:-39247969 None:intergenic
GAGGGATTATTAGTGTATGG+TGG 0.654652 2_3:+39247419 Msa0291090:CDS
TGCTAGCCGAGGCAGCCAAG+AGG 0.662151 2_3:+39247400 Msa0291090:CDS
ACAAGAGCTCCATGAATGGG+AGG 0.664822 2_3:-39249197 None:intergenic
GGGCCCAAGTGGAAACAAGT+GGG 0.666793 2_3:+39247153 Msa0291090:CDS
TTTCACCTTAAAGAAATGGG+TGG 0.669012 2_3:+39249011 Msa0291090:CDS
CAAAATGCAAGTGAGAAATG+GGG 0.669107 2_3:+39248110 Msa0291090:CDS
AAAGTTGCAAGGGAAGAGGT+GGG 0.669531 2_3:+39247030 Msa0291090:CDS
GCCATCGTGACACCAACACG+TGG 0.675349 2_3:-39246738 None:intergenic
GCCACGTGTTGGTGTCACGA+TGG 0.676673 2_3:+39246737 Msa0291090:CDS
ATCGTGACACCAACACGTGG+CGG 0.680472 2_3:-39246735 None:intergenic
GCAAATGCGCACCACCCACG+TGG 0.684596 2_3:-39247374 None:intergenic
TGAGCTTTATGCATTAGACA+CGG 0.693180 2_3:+39247295 Msa0291090:CDS
AAGACAAACCTGCAAACCGG+TGG 0.695495 2_3:-39248368 None:intergenic
CATGTAACTTGTTATCAACG+GGG 0.715551 2_3:-39246656 None:intergenic
ACGACCTAGATACCTTGACA+TGG 0.737782 2_3:+39246682 Msa0291090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTTAATAAATAATTGT+TGG + chr2_3:39245886-39245905 Msa0291090:intron 10.0%
!! CTATTATGATAAAAATAAAA+AGG - chr2_3:39245978-39245997 None:intergenic 10.0%
!!! TAATTTTTCAATATAATCAA+AGG - chr2_3:39246341-39246360 None:intergenic 10.0%
!!! GTCAAATTTTTCTTATAAAT+AGG - chr2_3:39245616-39245635 None:intergenic 15.0%
!! AGAAATAATGTATTTGTATT+TGG + chr2_3:39245652-39245671 Msa0291090:intron 15.0%
!!! TGTATACTCTATTTTTATTT+GGG + chr2_3:39245775-39245794 Msa0291090:intron 15.0%
!! AATATTCTTAAAATTCTCTT+AGG + chr2_3:39246417-39246436 Msa0291090:intron 15.0%
!! AATAACATATATTTAAGCTA+AGG - chr2_3:39247794-39247813 None:intergenic 15.0%
!! TAAAATTAAAATTATGTAGC+AGG + chr2_3:39247849-39247868 Msa0291090:intron 15.0%
!!! ATTTTTCTTATAAATAGGAC+CGG - chr2_3:39245611-39245630 None:intergenic 20.0%
!!! GTCAACTTTTTCTTATAAAT+AGG + chr2_3:39245721-39245740 Msa0291090:intron 20.0%
!!! GTGTATACTCTATTTTTATT+TGG + chr2_3:39245774-39245793 Msa0291090:intron 20.0%
!! AGCTTATAATAGCTTATTTA+TGG - chr2_3:39246161-39246180 None:intergenic 20.0%
!!! GTTGAGATTTCAATTTTTTA+GGG - chr2_3:39246305-39246324 None:intergenic 20.0%
!!! AGTTGAGATTTCAATTTTTT+AGG - chr2_3:39246306-39246325 None:intergenic 20.0%
!! AGTCATAAATAGTATTTGTA+GGG - chr2_3:39246443-39246462 None:intergenic 20.0%
!!! TTCATTTTAAAAAATGTACC+AGG - chr2_3:39246505-39246524 None:intergenic 20.0%
!!! TGTTTTCAACTTGTTTAATT+GGG + chr2_3:39247198-39247217 Msa0291090:CDS 20.0%
!!! TTCTTTCAAGTAATAAATCA+TGG + chr2_3:39248134-39248153 Msa0291090:CDS 20.0%
!! CTTGAATAAAACTATGAAAT+TGG - chr2_3:39248417-39248436 None:intergenic 20.0%
!!! CAATTTCATAGTTTTATTCA+AGG + chr2_3:39248415-39248434 Msa0291090:intron 20.0%
!!! TGTTTTTTTCATTTACATGA+GGG - chr2_3:39248601-39248620 None:intergenic 20.0%
!!! TTGTTTTTTTCATTTACATG+AGG - chr2_3:39248602-39248621 None:intergenic 20.0%
!! ATTATAAGGAACTAAAAAGT+TGG - chr2_3:39248837-39248856 None:intergenic 20.0%
!! AAATAAGAGTTAATCAACTT+AGG - chr2_3:39249595-39249614 None:intergenic 20.0%
!!! AGAATTTTAGCAAAAAGTAT+AGG + chr2_3:39249774-39249793 Msa0291090:CDS 20.0%
!!! ATCATTTTCTGTTCTAAAAA+GGG - chr2_3:39249820-39249839 None:intergenic 20.0%
!!! AAAGAAGTATCTCTATATAT+TGG - chr2_3:39249909-39249928 None:intergenic 20.0%
!! CTTTTTCTTATAAATAGGAC+CGG + chr2_3:39245726-39245745 Msa0291090:intron 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr2_3:39245836-39245855 Msa0291090:intron 25.0%
! GACAATCAAAAGTTTATGTT+TGG - chr2_3:39246187-39246206 None:intergenic 25.0%
! AAATTCTCAGAAACTATTCA+AGG - chr2_3:39246384-39246403 None:intergenic 25.0%
! GAGTCATAAATAGTATTTGT+AGG - chr2_3:39246444-39246463 None:intergenic 25.0%
!!! GTGTTTTCAACTTGTTTAAT+TGG + chr2_3:39247197-39247216 Msa0291090:CDS 25.0%
! AAACACATAATTGTATATGG+TGG + chr2_3:39247221-39247240 Msa0291090:CDS 25.0%
! AACACATAATTGTATATGGT+GGG + chr2_3:39247222-39247241 Msa0291090:CDS 25.0%
! AACATATATTTAAGCTAAGG+CGG - chr2_3:39247791-39247810 None:intergenic 25.0%
!! CTTGTTATGAAATACAAGTA+CGG - chr2_3:39247826-39247845 None:intergenic 25.0%
! GAACAATCTAATATCAATCA+TGG + chr2_3:39247987-39248006 Msa0291090:CDS 25.0%
!!! GGAAAGATAAACAACTTTTT+TGG - chr2_3:39248258-39248277 None:intergenic 25.0%
! GTCTTGATAAAGAGTAAAAT+TGG - chr2_3:39248279-39248298 None:intergenic 25.0%
! GAATAAAACTATGAAATTGG+TGG - chr2_3:39248414-39248433 None:intergenic 25.0%
!!! TCATTTGTAAGTTTTAGTGA+AGG - chr2_3:39248543-39248562 None:intergenic 25.0%
! GAAGATGATCTCTAATTATA+AGG - chr2_3:39248851-39248870 None:intergenic 25.0%
! TGAATACACAAAAGAAGTAA+TGG + chr2_3:39248935-39248954 Msa0291090:CDS 25.0%
! ATATTCATACAACATGTTGT+TGG + chr2_3:39249435-39249454 Msa0291090:intron 25.0%
! TCTTGCATATAAATGAAATG+AGG + chr2_3:39249520-39249539 Msa0291090:intron 25.0%
! AAAGTCTAACAATGTATCAA+AGG + chr2_3:39249651-39249670 Msa0291090:intron 25.0%
!!! GATCATTTTCTGTTCTAAAA+AGG - chr2_3:39249821-39249840 None:intergenic 25.0%
! AAGTATCTCTATATATTGGT+GGG - chr2_3:39249905-39249924 None:intergenic 25.0%
AAGTACTTGTGAGACTATTT+GGG - chr2_3:39246134-39246153 None:intergenic 30.0%
TAAGTACTTGTGAGACTATT+TGG - chr2_3:39246135-39246154 None:intergenic 30.0%
!! ACATGTAACTTGTTATCAAC+GGG - chr2_3:39246660-39246679 None:intergenic 30.0%
!! CACATGTAACTTGTTATCAA+CGG - chr2_3:39246661-39246680 None:intergenic 30.0%
TTGACACTAAAACCAACAAT+TGG + chr2_3:39246835-39246854 Msa0291090:CDS 30.0%
TGACACTAAAACCAACAATT+GGG + chr2_3:39246836-39246855 Msa0291090:CDS 30.0%
! AACAAGTTGAAAACACACTA+CGG - chr2_3:39247193-39247212 None:intergenic 30.0%
GGGAAACACATAATTGTATA+TGG + chr2_3:39247218-39247237 Msa0291090:CDS 30.0%
ACACATAATTGTATATGGTG+GGG + chr2_3:39247223-39247242 Msa0291090:CDS 30.0%
! CAAGTTCTATTTGAAATACC+AGG - chr2_3:39247748-39247767 None:intergenic 30.0%
CTGGTATTTCAAATAGAACT+TGG + chr2_3:39247746-39247765 Msa0291090:intron 30.0%
TTGGAAATTAGTTGACAATG+AGG + chr2_3:39247765-39247784 Msa0291090:intron 30.0%
TGACAGAAAAAGTGAACTAA+AGG + chr2_3:39247887-39247906 Msa0291090:CDS 30.0%
AAAGGAATTTGATGAGTCAA+AGG + chr2_3:39247905-39247924 Msa0291090:CDS 30.0%
TTCCTGTTAAGTCAATTGTA+GGG - chr2_3:39248046-39248065 None:intergenic 30.0%
ATTCCTGTTAAGTCAATTGT+AGG - chr2_3:39248047-39248066 None:intergenic 30.0%
TTCAAAATGCAAGTGAGAAA+TGG + chr2_3:39248108-39248127 Msa0291090:CDS 30.0%
TCAAAATGCAAGTGAGAAAT+GGG + chr2_3:39248109-39248128 Msa0291090:CDS 30.0%
! TTTTGGATGAGATGATCAAA+GGG + chr2_3:39248171-39248190 Msa0291090:CDS 30.0%
AGTTTGACTAGTGATTATTC+CGG + chr2_3:39248479-39248498 Msa0291090:intron 30.0%
ACAAGTAATCAAAGCCAAAA+AGG + chr2_3:39248652-39248671 Msa0291090:intron 30.0%
AAAATCCGAGAAAAAATACG+TGG + chr2_3:39248790-39248809 Msa0291090:intron 30.0%
! ACAAAAGAAGTAATGGAACT+TGG + chr2_3:39248942-39248961 Msa0291090:CDS 30.0%
! GTACTTTTGCAAGATCATAT+TGG + chr2_3:39249134-39249153 Msa0291090:CDS 30.0%
GATTGTCATGAAGAATTTGT+AGG - chr2_3:39249163-39249182 None:intergenic 30.0%
AAATTCTTCATGACAATCAG+TGG + chr2_3:39249165-39249184 Msa0291090:CDS 30.0%
CACTGAAAACTATAGTAACA+TGG + chr2_3:39249322-39249341 Msa0291090:intron 30.0%
TCAGATAAAAGTTCCTTGAT+TGG - chr2_3:39249876-39249895 None:intergenic 30.0%
! GAAGTATCTCTATATATTGG+TGG - chr2_3:39249906-39249925 None:intergenic 30.0%
!! TACTTCTTTGAAAGAGTACT+TGG + chr2_3:39249920-39249939 Msa0291090:CDS 30.0%
!! TTGGCATATCGTTTTTCAAA+CGG + chr2_3:39249939-39249958 Msa0291090:CDS 30.0%
TCTTTGTGTAACAACTTGAA+GGG - chr2_3:39249987-39250006 None:intergenic 30.0%
TTCTTTGTGTAACAACTTGA+AGG - chr2_3:39249988-39250007 None:intergenic 30.0%
TGGTTGTAAATGTGGTGAAT+TGG + chr2_3:39245550-39245569 Msa0291090:CDS 35.0%
GGTTGTAAATGTGGTGAATT+GGG + chr2_3:39245551-39245570 Msa0291090:CDS 35.0%
TGTGGTGAATTGGGTATAAA+TGG + chr2_3:39245560-39245579 Msa0291090:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr2_3:39245730-39245749 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr2_3:39245729-39245748 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+TGG + chr2_3:39245730-39245749 Msa0291090:intron 35.0%
ATGTTATAAGCTACTCCATC+CGG - chr2_3:39245748-39245767 None:intergenic 35.0%
GTGCAATATTGCACATGTTA+AGG - chr2_3:39245948-39245967 None:intergenic 35.0%
ACTATATCCTGATGAGCTTA+TGG + chr2_3:39246055-39246074 Msa0291090:intron 35.0%
CTTATTTCCATAAGCTCATC+AGG - chr2_3:39246065-39246084 None:intergenic 35.0%
! CTATAGTGAAGTATCTTGTG+TGG - chr2_3:39246250-39246269 None:intergenic 35.0%
TTCTCAGAAACTATTCAAGG+TGG - chr2_3:39246381-39246400 None:intergenic 35.0%
ATTGTGCTAAAAGTGATTCC+TGG + chr2_3:39246484-39246503 Msa0291090:intron 35.0%
TTGTTTCAGCTTGATCAAAG+AGG + chr2_3:39246546-39246565 Msa0291090:intron 35.0%
!! CATGTAACTTGTTATCAACG+GGG - chr2_3:39246659-39246678 None:intergenic 35.0%
GGAGAAACCATCTATGTATT+TGG + chr2_3:39246768-39246787 Msa0291090:CDS 35.0%
GAAACCATCTATGTATTTGG+TGG + chr2_3:39246771-39246790 Msa0291090:CDS 35.0%
TCTTCCACCAAATACATAGA+TGG - chr2_3:39246778-39246797 None:intergenic 35.0%
AACATCTCCACTTGAAATCA+AGG - chr2_3:39246862-39246881 None:intergenic 35.0%
! TTGATTTCAAGTGGAGATGT+TGG + chr2_3:39246861-39246880 Msa0291090:CDS 35.0%
! TGATTTCAAGTGGAGATGTT+GGG + chr2_3:39246862-39246881 Msa0291090:CDS 35.0%
AGGAAGGCTCAATGATTTAT+GGG + chr2_3:39246959-39246978 Msa0291090:CDS 35.0%
! GGAAAAATATGGGTTGTGTA+TGG + chr2_3:39247074-39247093 Msa0291090:CDS 35.0%
! ACAAGTTGAAAACACACTAC+GGG - chr2_3:39247192-39247211 None:intergenic 35.0%
! TGAGCTTTATGCATTAGACA+CGG + chr2_3:39247295-39247314 Msa0291090:CDS 35.0%
CATACACTAATAATCCCTCT+TGG - chr2_3:39247418-39247437 None:intergenic 35.0%
CAAGAGGGATTATTAGTGTA+TGG + chr2_3:39247416-39247435 Msa0291090:CDS 35.0%
GCATATGTGTGATCAATTCT+AGG + chr2_3:39247531-39247550 Msa0291090:intron 35.0%
TCAGTATGTCATGTGAACTT+AGG + chr2_3:39247574-39247593 Msa0291090:intron 35.0%
AAAGCGTGTTTAATACAACC+TGG + chr2_3:39247727-39247746 Msa0291090:intron 35.0%
GAATTTGATGAGTCAAAGGT+TGG + chr2_3:39247909-39247928 Msa0291090:CDS 35.0%
ACAACTTCATCTCTCAAAAC+AGG - chr2_3:39248080-39248099 None:intergenic 35.0%
CAAAATGCAAGTGAGAAATG+GGG + chr2_3:39248110-39248129 Msa0291090:CDS 35.0%
! TGGAATTCCAGTTCATGTTT+TGG + chr2_3:39248154-39248173 Msa0291090:CDS 35.0%
ATCTCATCCAAAACATGAAC+TGG - chr2_3:39248164-39248183 None:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+AGG + chr2_3:39248170-39248189 Msa0291090:CDS 35.0%
!!! AACTTTTTTGGTGAGATCAC+GGG - chr2_3:39248246-39248265 None:intergenic 35.0%
!!! CAACTTTTTTGGTGAGATCA+CGG - chr2_3:39248247-39248266 None:intergenic 35.0%
ATTAAGACAAACCTGCAAAC+CGG - chr2_3:39248374-39248393 None:intergenic 35.0%
ATTTACATGAGGGACTAACT+AGG - chr2_3:39248591-39248610 None:intergenic 35.0%
!!! GTACACCACGTATTTTTTCT+CGG - chr2_3:39248798-39248817 None:intergenic 35.0%
GAATTCAATGTCCTTGATGA+TGG + chr2_3:39248879-39248898 Msa0291090:intron 35.0%
GTTATCAATAGCCATCATCA+AGG - chr2_3:39248893-39248912 None:intergenic 35.0%
!! CTTTAAGGTGAAAGCGATTA+AGG - chr2_3:39249004-39249023 None:intergenic 35.0%
TCGCTTTCACCTTAAAGAAA+TGG + chr2_3:39249007-39249026 Msa0291090:CDS 35.0%
CGCTTTCACCTTAAAGAAAT+GGG + chr2_3:39249008-39249027 Msa0291090:CDS 35.0%
TTTCACCTTAAAGAAATGGG+TGG + chr2_3:39249011-39249030 Msa0291090:CDS 35.0%
! CTTTTGCAAGATCATATTGG+TGG + chr2_3:39249137-39249156 Msa0291090:CDS 35.0%
! ATTGATTTACCTCCCATTCA+TGG + chr2_3:39249188-39249207 Msa0291090:CDS 35.0%
TTAAGCAAGAAGTCTGACTT+AGG + chr2_3:39249484-39249503 Msa0291090:intron 35.0%
TTTCCATCTTAGAGATGACA+AGG + chr2_3:39249560-39249579 Msa0291090:intron 35.0%
AGTTAATCAACTTAGGACCA+TGG - chr2_3:39249588-39249607 None:intergenic 35.0%
AGAAAATGATCATTCTCCTG+AGG + chr2_3:39249830-39249849 Msa0291090:CDS 35.0%
GAAAATGATCATTCTCCTGA+GGG + chr2_3:39249831-39249850 Msa0291090:CDS 35.0%
! TTGATTGGTCCAATCACTTT+CGG - chr2_3:39249861-39249880 None:intergenic 35.0%
!! TATCGTTTTTCAAACGGTCT+TGG + chr2_3:39249945-39249964 Msa0291090:CDS 35.0%
! ACTCAACATTTTACTCCCTC+CGG + chr2_3:39245589-39245608 Msa0291090:intron 40.0%
TCAGAAACTATTCAAGGTGG+TGG - chr2_3:39246378-39246397 None:intergenic 40.0%
GATCAAAGAGGAATCTTGCA+AGG + chr2_3:39246558-39246577 Msa0291090:CDS 40.0%
TCACATGCTATTGCTGTAGT+AGG + chr2_3:39246591-39246610 Msa0291090:CDS 40.0%
TATTGCTGTAGTAGGACAGA+AGG + chr2_3:39246599-39246618 Msa0291090:CDS 40.0%
GGACAGAAGGTTTATGCATT+TGG + chr2_3:39246612-39246631 Msa0291090:CDS 40.0%
CAGAAGGTTTATGCATTTGG+CGG + chr2_3:39246615-39246634 Msa0291090:CDS 40.0%
TGAAATCAAGGCCCAATTGT+TGG - chr2_3:39246850-39246869 None:intergenic 40.0%
AATTGGGCCTTGATTTCAAG+TGG + chr2_3:39246852-39246871 Msa0291090:CDS 40.0%
CACCAAAAACATACACACGT+CGG - chr2_3:39246926-39246945 None:intergenic 40.0%
CAGGAAGGCTCAATGATTTA+TGG + chr2_3:39246958-39246977 Msa0291090:CDS 40.0%
TTTATGGGCCTTTGATGTTG+TGG + chr2_3:39246974-39246993 Msa0291090:CDS 40.0%
! CACAACCCATATTTTTCCCT+GGG - chr2_3:39247072-39247091 None:intergenic 40.0%
! ACACAACCCATATTTTTCCC+TGG - chr2_3:39247073-39247092 None:intergenic 40.0%
! AACAAGTGGGCTTAAACCAA+CGG + chr2_3:39247166-39247185 Msa0291090:CDS 40.0%
GAGGGATTATTAGTGTATGG+TGG + chr2_3:39247419-39247438 Msa0291090:CDS 40.0%
ACTAACTTTGAGCAAGAGCA+AGG - chr2_3:39247484-39247503 None:intergenic 40.0%
TGCTCTTGCTCAAAGTTAGT+TGG + chr2_3:39247484-39247503 Msa0291090:intron 40.0%
GTCCAAGGACTCATAGAAAA+TGG + chr2_3:39247933-39247952 Msa0291090:CDS 40.0%
! CACCATTTTCTATGAGTCCT+TGG - chr2_3:39247938-39247957 None:intergenic 40.0%
TGTTCACAATAGAACATGCG+TGG - chr2_3:39247972-39247991 None:intergenic 40.0%
! GTCCCTACAATTGACTTAAC+AGG + chr2_3:39248041-39248060 Msa0291090:CDS 40.0%
CTCTCAAAACAGGATCATCA+TGG - chr2_3:39248070-39248089 None:intergenic 40.0%
ATCAAGACCAATCTGCTGAT+TGG + chr2_3:39248291-39248310 Msa0291090:CDS 40.0%
! GGACACACTTGCATTTTTCT+GGG + chr2_3:39248316-39248335 Msa0291090:CDS 40.0%
!! TTCATCAGCTTTAGGAGGAT+CGG - chr2_3:39248345-39248364 None:intergenic 40.0%
TAAAGCTGATGAACTACCAC+CGG + chr2_3:39248352-39248371 Msa0291090:CDS 40.0%
CTGCTGAACTCTAGATTACA+TGG - chr2_3:39248447-39248466 None:intergenic 40.0%
! CATGTAATCTAGAGTTCAGC+AGG + chr2_3:39248445-39248464 Msa0291090:intron 40.0%
! TAATCTAGAGTTCAGCAGGA+GGG + chr2_3:39248449-39248468 Msa0291090:intron 40.0%
TTCCGGTAAAAGTTCAAACG+CGG + chr2_3:39248496-39248515 Msa0291090:intron 40.0%
! TGTGTATGAGTTTTGCTGCT+TGG + chr2_3:39248694-39248713 Msa0291090:intron 40.0%
GAGTTATTGTCAGAAGCTCT+TGG + chr2_3:39248978-39248997 Msa0291090:CDS 40.0%
ACTACAAGAGCTCCATGAAT+GGG - chr2_3:39249203-39249222 None:intergenic 40.0%
GAACATTGGAGATCTTCTAC+AGG + chr2_3:39249223-39249242 Msa0291090:CDS 40.0%
GAAAGTGATTGGACCAATCA+AGG + chr2_3:39249860-39249879 Msa0291090:CDS 40.0%
ACGACCTAGATACCTTGACA+TGG + chr2_3:39246682-39246701 Msa0291090:CDS 45.0%
! CTGACCATGTCAAGGTATCT+AGG - chr2_3:39246689-39246708 None:intergenic 45.0%
AACATACACACGTCGGTCAT+CGG - chr2_3:39246919-39246938 None:intergenic 45.0%
! GACCGACGTGTGTATGTTTT+TGG + chr2_3:39246921-39246940 Msa0291090:CDS 45.0%
!!! CGACGTGTGTATGTTTTTGG+TGG + chr2_3:39246924-39246943 Msa0291090:CDS 45.0%
!!! GTGTATGTTTTTGGTGGCTG+TGG + chr2_3:39246930-39246949 Msa0291090:CDS 45.0%
CTTGCCATCCACAACATCAA+AGG - chr2_3:39246985-39247004 None:intergenic 45.0%
TTGATGTTGTGGATGGCAAG+TGG + chr2_3:39246985-39247004 Msa0291090:CDS 45.0%
TGATGTTGTGGATGGCAAGT+GGG + chr2_3:39246986-39247005 Msa0291090:CDS 45.0%
TTGCAACTTTCACCAGGAGA+TGG - chr2_3:39247020-39247039 None:intergenic 45.0%
ATCTCCTGGTGAAAGTTGCA+AGG + chr2_3:39247019-39247038 Msa0291090:CDS 45.0%
TCTCCTGGTGAAAGTTGCAA+GGG + chr2_3:39247020-39247039 Msa0291090:CDS 45.0%
AAAGTTGCAAGGGAAGAGGT+GGG + chr2_3:39247030-39247049 Msa0291090:CDS 45.0%
AGTGGCCCAGGGAAAAATAT+GGG + chr2_3:39247064-39247083 Msa0291090:CDS 45.0%
TGTGTATGGTTTCGCTGGAA+TGG + chr2_3:39247088-39247107 Msa0291090:CDS 45.0%
TGACGTGCATTTCTTCGATC+TGG + chr2_3:39247118-39247137 Msa0291090:CDS 45.0%
TCGATCTGGCCCAAAAAACA+TGG + chr2_3:39247132-39247151 Msa0291090:CDS 45.0%
CGATCTGGCCCAAAAAACAT+GGG + chr2_3:39247133-39247152 Msa0291090:CDS 45.0%
!!! CACTTGGGCCCATGTTTTTT+GGG - chr2_3:39247144-39247163 None:intergenic 45.0%
AAGCCCACTTGTTTCCACTT+GGG - chr2_3:39247159-39247178 None:intergenic 45.0%
TAAGCCCACTTGTTTCCACT+TGG - chr2_3:39247160-39247179 None:intergenic 45.0%
GAAATAGACCCTAGTGACCA+AGG + chr2_3:39247245-39247264 Msa0291090:CDS 45.0%
!!! ATGGGTGCTGGTCAATTTTC+AGG + chr2_3:39247272-39247291 Msa0291090:CDS 45.0%
TAGACACGGAGACACTATCA+TGG + chr2_3:39247309-39247328 Msa0291090:CDS 45.0%
TTGGACGATAAGGTGGAATC+AGG + chr2_3:39247338-39247357 Msa0291090:CDS 45.0%
TGGAATCAGGTGATCATCCA+GGG + chr2_3:39247351-39247370 Msa0291090:CDS 45.0%
ATTTCACCAGCAAGATGCCA+AGG + chr2_3:39248202-39248221 Msa0291090:CDS 45.0%
ATAGTACTCCTTCCTCACCT+TGG - chr2_3:39248222-39248241 None:intergenic 45.0%
! AAGACCAATCTGCTGATTGG+AGG + chr2_3:39248294-39248313 Msa0291090:CDS 45.0%
! AGACCAATCTGCTGATTGGA+GGG + chr2_3:39248295-39248314 Msa0291090:CDS 45.0%
! GGGACACACTTGCATTTTTC+TGG + chr2_3:39248315-39248334 Msa0291090:CDS 45.0%
!! TCATCAGCTTTAGGAGGATC+GGG - chr2_3:39248344-39248363 None:intergenic 45.0%
!! GGTAGTTCATCAGCTTTAGG+AGG - chr2_3:39248350-39248369 None:intergenic 45.0%
GGTGGTAGTTCATCAGCTTT+AGG - chr2_3:39248353-39248372 None:intergenic 45.0%
! GTAATCTAGAGTTCAGCAGG+AGG + chr2_3:39248448-39248467 Msa0291090:intron 45.0%
TCCGGTAAAAGTTCAAACGC+GGG + chr2_3:39248497-39248516 Msa0291090:intron 45.0%
! ACCCGCGTTTGAACTTTTAC+CGG - chr2_3:39248501-39248520 None:intergenic 45.0%
ACACACTGAGTGCACAGAAA+GGG - chr2_3:39248679-39248698 None:intergenic 45.0%
TACACACTGAGTGCACAGAA+AGG - chr2_3:39248680-39248699 None:intergenic 45.0%
CAGCACCACCCATTTCTTTA+AGG - chr2_3:39249019-39249038 None:intergenic 45.0%
! CTATGGTTAACTCTGGCTCA+GGG - chr2_3:39249079-39249098 None:intergenic 45.0%
GTAGTGCCTATGGTTAACTC+TGG - chr2_3:39249086-39249105 None:intergenic 45.0%
AAAGCTAGCATCTGAGTGCT+TGG - chr2_3:39249108-39249127 None:intergenic 45.0%
CACTACAAGAGCTCCATGAA+TGG - chr2_3:39249204-39249223 None:intergenic 45.0%
GGAGCTCTTGTAGTGAACAT+TGG + chr2_3:39249209-39249228 Msa0291090:CDS 45.0%
!! CAACATGTTGTTGGTTCGAG+TGG + chr2_3:39249444-39249463 Msa0291090:intron 45.0%
! GCTCCTTGTCATCTCTAAGA+TGG - chr2_3:39249566-39249585 None:intergenic 45.0%
TTAGAGATGACAAGGAGCCA+TGG + chr2_3:39249568-39249587 Msa0291090:intron 45.0%
GGGTTGCAGCTGAAATTCTT+GGG - chr2_3:39249800-39249819 None:intergenic 45.0%
AGGGTTGCAGCTGAAATTCT+TGG - chr2_3:39249801-39249820 None:intergenic 45.0%
!! TATTATGATAAAAATAAAAA+GGG - chr2_3:39245977-39245996 None:intergenic 5.0%
TTGTTATCAACGGGGACACG+TGG - chr2_3:39246651-39246670 None:intergenic 50.0%
ATCGGCTACTGACCATGTCA+AGG - chr2_3:39246697-39246716 None:intergenic 50.0%
TGGTCAGTAGCCGATGTATC+CGG + chr2_3:39246702-39246721 Msa0291090:CDS 50.0%
ATGGAGTGGTAGCTACGGTT+AGG - chr2_3:39246891-39246910 None:intergenic 50.0%
CAGTCATGGAGTGGTAGCTA+CGG - chr2_3:39246896-39246915 None:intergenic 50.0%
!!! TGTTTTTGGTGGCTGTGGAG+TGG + chr2_3:39246935-39246954 Msa0291090:CDS 50.0%
TGGGCCTTTGATGTTGTGGA+TGG + chr2_3:39246978-39246997 Msa0291090:CDS 50.0%
TGGGTGGAATTTCCATCTCC+TGG + chr2_3:39247005-39247024 Msa0291090:CDS 50.0%
CTTCCCTTGCAACTTTCACC+AGG - chr2_3:39247026-39247045 None:intergenic 50.0%
GGTGAAAGTTGCAAGGGAAG+AGG + chr2_3:39247026-39247045 Msa0291090:CDS 50.0%
GAAAGTTGCAAGGGAAGAGG+TGG + chr2_3:39247029-39247048 Msa0291090:CDS 50.0%
! TTTTTCCCTGGGCCACTGTT+AGG - chr2_3:39247061-39247080 None:intergenic 50.0%
CAGTGGCCCAGGGAAAAATA+TGG + chr2_3:39247063-39247082 Msa0291090:CDS 50.0%
TGGGTTGTGTATGGTTTCGC+TGG + chr2_3:39247083-39247102 Msa0291090:CDS 50.0%
TGGTTTCGCTGGAATGGAAG+TGG + chr2_3:39247094-39247113 Msa0291090:CDS 50.0%
!!! CCACTTGGGCCCATGTTTTT+TGG - chr2_3:39247145-39247164 None:intergenic 50.0%
CCAAAAAACATGGGCCCAAG+TGG + chr2_3:39247142-39247161 Msa0291090:CDS 50.0%
CCATGTGACCTTGGTCACTA+GGG - chr2_3:39247256-39247275 None:intergenic 50.0%
CCTAGTGACCAAGGTCACAT+GGG + chr2_3:39247254-39247273 Msa0291090:CDS 50.0%
GACACTATCATGGACGAGGT+TGG + chr2_3:39247319-39247338 Msa0291090:CDS 50.0%
ATGGACGAGGTTGGACGATA+AGG + chr2_3:39247328-39247347 Msa0291090:CDS 50.0%
GTGGAATCAGGTGATCATCC+AGG + chr2_3:39247350-39247369 Msa0291090:CDS 50.0%
ATAATCCCTCTTGGCTGCCT+CGG - chr2_3:39247409-39247428 None:intergenic 50.0%
TCATCAAGCCTGTCGTTGCT+AGG - chr2_3:39247452-39247471 None:intergenic 50.0%
!! GAGTCAAAGGTTGGTGTCCA+AGG + chr2_3:39247918-39247937 Msa0291090:CDS 50.0%
TGTCCCTCCAATCAGCAGAT+TGG - chr2_3:39248301-39248320 None:intergenic 50.0%
!! ATGAACTACCACCGGTTTGC+AGG + chr2_3:39248360-39248379 Msa0291090:CDS 50.0%
AAGACAAACCTGCAAACCGG+TGG - chr2_3:39248371-39248390 None:intergenic 50.0%
! TGCACAGAAAGGGGCCTTTT+TGG - chr2_3:39248669-39248688 None:intergenic 50.0%
CACACTGAGTGCACAGAAAG+GGG - chr2_3:39248678-39248697 None:intergenic 50.0%
! CCTATGGTTAACTCTGGCTC+AGG - chr2_3:39249080-39249099 None:intergenic 50.0%
CCTGAGCCAGAGTTAACCAT+AGG + chr2_3:39249077-39249096 Msa0291090:CDS 50.0%
!! TGAGTGCTTGGTAGTGCCTA+TGG - chr2_3:39249096-39249115 None:intergenic 50.0%
ACAAGAGCTCCATGAATGGG+AGG - chr2_3:39249200-39249219 None:intergenic 50.0%
ATCACTTTCGGTATGCCCTC+AGG - chr2_3:39249849-39249868 None:intergenic 50.0%
! GAGGGCATACCGAAAGTGAT+TGG + chr2_3:39249849-39249868 Msa0291090:CDS 50.0%
GGTCAGTAGCCGATGTATCC+GGG + chr2_3:39246703-39246722 Msa0291090:CDS 55.0%
CGGTGTGTTCCCGGATACAT+CGG - chr2_3:39246715-39246734 None:intergenic 55.0%
ATCGTGACACCAACACGTGG+CGG - chr2_3:39246738-39246757 None:intergenic 55.0%
GAGTGGTAGCTACGGTTAGG+AGG - chr2_3:39246888-39246907 None:intergenic 55.0%
TGTTGTGGATGGCAAGTGGG+TGG + chr2_3:39246989-39247008 Msa0291090:CDS 55.0%
TGGGCCCAAGTGGAAACAAG+TGG + chr2_3:39247152-39247171 Msa0291090:CDS 55.0%
GGGCCCAAGTGGAAACAAGT+GGG + chr2_3:39247153-39247172 Msa0291090:CDS 55.0%
GAAAACACACTACGGGCCGT+TGG - chr2_3:39247185-39247204 None:intergenic 55.0%
CCCTAGTGACCAAGGTCACA+TGG + chr2_3:39247253-39247272 Msa0291090:CDS 55.0%
CCCATGTGACCTTGGTCACT+AGG - chr2_3:39247257-39247276 None:intergenic 55.0%
CGGAGACACTATCATGGACG+AGG + chr2_3:39247315-39247334 Msa0291090:CDS 55.0%
GACGAGGTTGGACGATAAGG+TGG + chr2_3:39247331-39247350 Msa0291090:CDS 55.0%
GCAACTCACCTAGCAACGAC+AGG + chr2_3:39247441-39247460 Msa0291090:CDS 55.0%
ACCAGCAAGATGCCAAGGTG+AGG + chr2_3:39248207-39248226 Msa0291090:CDS 55.0%
TCCTCACCTTGGCATCTTGC+TGG - chr2_3:39248211-39248230 None:intergenic 55.0%
GCAAGATGCCAAGGTGAGGA+AGG + chr2_3:39248211-39248230 Msa0291090:CDS 55.0%
! GTTAACTCTGGCTCAGGGCA+TGG - chr2_3:39249074-39249093 None:intergenic 55.0%
!! GCCACGTGTTGGTGTCACGA+TGG + chr2_3:39246737-39246756 Msa0291090:CDS 60.0%
GCCATCGTGACACCAACACG+TGG - chr2_3:39246741-39246760 None:intergenic 60.0%
! GGTGTCACGATGGCTGCAGT+TGG + chr2_3:39246747-39246766 Msa0291090:CDS 60.0%
GGTCATCGGCAGTCATGGAG+TGG - chr2_3:39246905-39246924 None:intergenic 60.0%
ACGTCGGTCATCGGCAGTCA+TGG - chr2_3:39246910-39246929 None:intergenic 60.0%
! TTTGGTGGCTGTGGAGTGGC+AGG + chr2_3:39246939-39246958 Msa0291090:CDS 60.0%
TTGCAAGGGAAGAGGTGGGC+CGG + chr2_3:39247034-39247053 Msa0291090:CDS 60.0%
GACCAAGGTCACATGGGTGC+TGG + chr2_3:39247260-39247279 Msa0291090:CDS 60.0%
GACCAGCACCCATGTGACCT+TGG - chr2_3:39247265-39247284 None:intergenic 60.0%
GTGATCATCCAGGGCCACGT+GGG + chr2_3:39247360-39247379 Msa0291090:CDS 60.0%
! AACTCTGGCTCAGGGCATGG+TGG - chr2_3:39249071-39249090 None:intergenic 60.0%
AACACACCGCCGCCACGTGT+TGG + chr2_3:39246726-39246745 Msa0291090:CDS 65.0%
GTGACACCAACACGTGGCGG+CGG - chr2_3:39246735-39246754 None:intergenic 65.0%
GTGGCTGTGGAGTGGCAGGA+AGG + chr2_3:39246943-39246962 Msa0291090:CDS 65.0%
TGCAAGGGAAGAGGTGGGCC+GGG + chr2_3:39247035-39247054 Msa0291090:CDS 65.0%
GGTGATCATCCAGGGCCACG+TGG + chr2_3:39247359-39247378 Msa0291090:CDS 65.0%
ATCATCCAGGGCCACGTGGG+TGG + chr2_3:39247363-39247382 Msa0291090:CDS 65.0%
GCAAATGCGCACCACCCACG+TGG - chr2_3:39247377-39247396 None:intergenic 65.0%
CGTGGGTGGTGCGCATTTGC+CGG + chr2_3:39247377-39247396 Msa0291090:CDS 65.0%
! GCATTTGCCGGTGCTAGCCG+AGG + chr2_3:39247389-39247408 Msa0291090:CDS 65.0%
TTGGCTGCCTCGGCTAGCAC+CGG - chr2_3:39247399-39247418 None:intergenic 65.0%
TGCTAGCCGAGGCAGCCAAG+AGG + chr2_3:39247400-39247419 Msa0291090:CDS 65.0%
GCTAGCCGAGGCAGCCAAGA+GGG + chr2_3:39247401-39247420 Msa0291090:CDS 65.0%
ACGTGGCGGCGGTGTGTTCC+CGG - chr2_3:39246724-39246743 None:intergenic 70.0%
AGGTGGGCCGGGCCTAACAG+TGG + chr2_3:39247046-39247065 Msa0291090:CDS 70.0%
CCCTGGGCCACTGTTAGGCC+CGG - chr2_3:39247056-39247075 None:intergenic 70.0%
CCGGGCCTAACAGTGGCCCA+GGG + chr2_3:39247053-39247072 Msa0291090:CDS 70.0%
GCCGGGCCTAACAGTGGCCC+AGG + chr2_3:39247052-39247071 Msa0291090:CDS 75.0%
! GCGCACCACCCACGTGGCCC+TGG - chr2_3:39247371-39247390 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 39245543 39250016 39245543 ID=Msa0291090;Name=Msa0291090
chr2_3 mRNA 39245543 39250016 39245543 ID=Msa0291090-mRNA-1;Parent=Msa0291090;Name=Msa0291090-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|0.8|1|1|5|0|694
chr2_3 exon 39245543 39245572 39245543 ID=Msa0291090-mRNA-1:exon:12719;Parent=Msa0291090-mRNA-1
chr2_3 exon 39246555 39247497 39246555 ID=Msa0291090-mRNA-1:exon:12720;Parent=Msa0291090-mRNA-1
chr2_3 exon 39247871 39248381 39247871 ID=Msa0291090-mRNA-1:exon:12721;Parent=Msa0291090-mRNA-1
chr2_3 exon 39248923 39249244 39248923 ID=Msa0291090-mRNA-1:exon:12722;Parent=Msa0291090-mRNA-1
chr2_3 exon 39249738 39250016 39249738 ID=Msa0291090-mRNA-1:exon:12723;Parent=Msa0291090-mRNA-1
chr2_3 CDS 39245543 39245572 39245543 ID=Msa0291090-mRNA-1:cds;Parent=Msa0291090-mRNA-1
chr2_3 CDS 39246555 39247497 39246555 ID=Msa0291090-mRNA-1:cds;Parent=Msa0291090-mRNA-1
chr2_3 CDS 39247871 39248381 39247871 ID=Msa0291090-mRNA-1:cds;Parent=Msa0291090-mRNA-1
chr2_3 CDS 39248923 39249244 39248923 ID=Msa0291090-mRNA-1:cds;Parent=Msa0291090-mRNA-1
chr2_3 CDS 39249738 39250016 39249738 ID=Msa0291090-mRNA-1:cds;Parent=Msa0291090-mRNA-1
Gene Sequence

>Msa0291090

ATGAGAGTGGTTGTAAATGTGGTGAATTGGCTTGATCAAAGAGGAATCTTGCAAGGAGCAAGAAGTTCACATGCTATTGCTGTAGTAGGACAGAAGGTTTATGCATTTGGCGGTGAGTTTGAGCCACGTGTCCCCGTTGATAACAAGTTACATGTGTACGACCTAGATACCTTGACATGGTCAGTAGCCGATGTATCCGGGAACACACCGCCGCCACGTGTTGGTGTCACGATGGCTGCAGTTGGAGAAACCATCTATGTATTTGGTGGAAGAGATGCTGAACACAATGAACTCAATGAGCTCTATTCTTTTGACACTAAAACCAACAATTGGGCCTTGATTTCAAGTGGAGATGTTGGGCCTCCTAACCGTAGCTACCACTCCATGACTGCCGATGACCGACGTGTGTATGTTTTTGGTGGCTGTGGAGTGGCAGGAAGGCTCAATGATTTATGGGCCTTTGATGTTGTGGATGGCAAGTGGGTGGAATTTCCATCTCCTGGTGAAAGTTGCAAGGGAAGAGGTGGGCCGGGCCTAACAGTGGCCCAGGGAAAAATATGGGTTGTGTATGGTTTCGCTGGAATGGAAGTGGATGACGTGCATTTCTTCGATCTGGCCCAAAAAACATGGGCCCAAGTGGAAACAAGTGGGCTTAAACCAACGGCCCGTAGTGTGTTTTCAACTTGTTTAATTGGGAAACACATAATTGTATATGGTGGGGAAATAGACCCTAGTGACCAAGGTCACATGGGTGCTGGTCAATTTTCAGGTGAGCTTTATGCATTAGACACGGAGACACTATCATGGACGAGGTTGGACGATAAGGTGGAATCAGGTGATCATCCAGGGCCACGTGGGTGGTGCGCATTTGCCGGTGCTAGCCGAGGCAGCCAAGAGGGATTATTAGTGTATGGTGGCAACTCACCTAGCAACGACAGGCTTGATGACATTTTCTTCCTTGCTCTTGCTCAAAGAAATGCTCAAATTTATGACAGAAAAAGTGAACTAAAGGAATTTGATGAGTCAAAGGTTGGTGTCCAAGGACTCATAGAAAATGGTGTAACAAAAGTTCCACGCATGTTCTATTGTGAACAATCTAATATCAATCATGGTTCAGTCAATGAATCAAATTCAAAGCTTAGTGTCCCTACAATTGACTTAACAGGAATCCATGATGATCCTGTTTTGAGAGATGAAGTTGTAAGAAAAGTTCAAAATGCAAGTGAGAAATGGGGATTCTTTCAAGTAATAAATCATGGAATTCCAGTTCATGTTTTGGATGAGATGATCAAAGGGACACGTAGATTTCACCAGCAAGATGCCAAGGTGAGGAAGGAGTACTATACCCGTGATCTCACCAAAAAAGTTGTTTATCTTTCCAATTTTACTCTTTATCAAGACCAATCTGCTGATTGGAGGGACACACTTGCATTTTTCTGGGCTCCCGATCCTCCTAAAGCTGATGAACTACCACCGGTTTGCAGTGATATTGTGAATGAATACACAAAAGAAGTAATGGAACTTGGATCTTCTTTGTATGAGTTATTGTCAGAAGCTCTTGGCCTTAATCGCTTTCACCTTAAAGAAATGGGTGGTGCTGAGAGTTTTTTACATCTATGTCATTATTATCCACCATGCCCTGAGCCAGAGTTAACCATAGGCACTACCAAGCACTCAGATGCTAGCTTTATTACAGTACTTTTGCAAGATCATATTGGTGGCCTACAAATTCTTCATGACAATCAGTGGATTGATTTACCTCCCATTCATGGAGCTCTTGTAGTGAACATTGGAGATCTTCTACAGCTTGTGAGTAATGACAAGTTCACAAGTGTTCAGCACAGAATTTTAGCAAAAAGTATAGGCCCAAGAATTTCAGCTGCAACCCTTTTTAGAACAGAAAATGATCATTCTCCTGAGGGCATACCGAAAGTGATTGGACCAATCAAGGAACTTTTATCTGAAGAAAACCCACCAATATATAGAGATACTTCTTTGAAAGAGTACTTGGCATATCGTTTTTCAAACGGTCTTGGAGCTTCTGCACTATCACCCTTCAAGTTGTTACACAAAGAAGCAACTTAG
Protein sequence

>Msa0291090

MRVVVNVVNWLDQRGILQGARSSHAIAVVGQKVYAFGGEFEPRVPVDNKLHVYDLDTLTWSVADVSGNTPPPRVGVTMAAVGETIYVFGGRDAEHNELNELYSFDTKTNNWALISSGDVGPPNRSYHSMTADDRRVYVFGGCGVAGRLNDLWAFDVVDGKWVEFPSPGESCKGRGGPGLTVAQGKIWVVYGFAGMEVDDVHFFDLAQKTWAQVETSGLKPTARSVFSTCLIGKHIIVYGGEIDPSDQGHMGAGQFSGELYALDTETLSWTRLDDKVESGDHPGPRGWCAFAGASRGSQEGLLVYGGNSPSNDRLDDIFFLALAQRNAQIYDRKSELKEFDESKVGVQGLIENGVTKVPRMFYCEQSNINHGSVNESNSKLSVPTIDLTGIHDDPVLRDEVVRKVQNASEKWGFFQVINHGIPVHVLDEMIKGTRRFHQQDAKVRKEYYTRDLTKKVVYLSNFTLYQDQSADWRDTLAFFWAPDPPKADELPPVCSDIVNEYTKEVMELGSSLYELLSEALGLNRFHLKEMGGAESFLHLCHYYPPCPEPELTIGTTKHSDASFITVLLQDHIGGLQILHDNQWIDLPPIHGALVVNIGDLLQLVSNDKFTSVQHRILAKSIGPRISAATLFRTENDHSPEGIPKVIGPIKELLSEENPPIYRDTSLKEYLAYRFSNGLGASALSPFKLLHKEAT*