AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0252880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0252880 MtrunA17_Chr2g0311701 91.057 369 33 0 326 694 13 381 0.0 701
Msa0252880 MtrunA17_Chr2g0311681 84.824 369 56 0 320 688 1 369 0.0 664
Msa0252880 MtrunA17_Chr2g0311721 96.914 324 10 0 1 324 1 324 0.0 655
Msa0252880 MtrunA17_Chr2g0311691 82.432 370 65 0 320 689 1 370 0.0 649
Msa0252880 MtrunA17_Chr2g0311711 82.920 363 59 1 326 688 11 370 0.0 636
Msa0252880 MtrunA17_Chr2g0311741 71.988 332 87 2 357 688 2 327 1.33e-173 498
Msa0252880 MtrunA17_Chr1g0187821 58.333 372 148 3 320 688 3 370 2.58e-153 448
Msa0252880 MtrunA17_Chr7g0235951 57.500 360 149 3 330 688 17 373 1.33e-151 444
Msa0252880 MtrunA17_Chr1g0187831 56.098 369 154 4 324 687 8 373 2.45e-149 439
Msa0252880 MtrunA17_Chr1g0187811 57.766 367 145 4 330 688 129 493 4.72e-149 442
Msa0252880 MtrunA17_Chr8g0335411 57.337 368 153 3 322 688 9 373 1.25e-145 429
Msa0252880 MtrunA17_Chr7g0236011 57.182 369 152 4 322 688 9 373 7.70e-140 414
Msa0252880 MtrunA17_Chr7g0247991 56.667 360 152 3 330 688 17 373 6.70e-139 412
Msa0252880 MtrunA17_Chr8g0364471 54.167 360 161 3 330 688 17 373 1.05e-138 411
Msa0252880 MtrunA17_Chr8g0336751 55.278 360 155 3 330 688 43 397 7.62e-136 405
Msa0252880 MtrunA17_Chr4g0055591 52.793 358 161 3 332 688 11 361 3.52e-134 399
Msa0252880 MtrunA17_Chr8g0336851 52.661 357 159 4 334 688 16 364 2.67e-133 397
Msa0252880 MtrunA17_Chr8g0336761 53.501 357 156 5 334 688 16 364 5.64e-131 391
Msa0252880 MtrunA17_Chr8g0348081 54.062 357 154 5 334 688 16 364 5.83e-131 391
Msa0252880 MtrunA17_Chr2g0311831 53.760 359 160 3 331 688 18 371 6.03e-131 391
Msa0252880 MtrunA17_Chr8g0336631 53.911 358 154 6 334 688 16 365 8.18e-129 385
Msa0252880 MtrunA17_Chr8g0354261 50.811 370 175 4 322 688 9 374 8.56e-129 386
Msa0252880 MtrunA17_Chr2g0311761 52.778 360 163 4 331 688 18 372 1.27e-128 385
Msa0252880 MtrunA17_Chr4g0066991 53.533 368 147 4 322 688 9 353 1.53e-128 384
Msa0252880 MtrunA17_Chr8g0336781 52.514 358 159 5 334 688 51 400 1.57e-128 386
Msa0252880 MtrunA17_Chr8g0354241 50.811 370 175 4 322 688 9 374 1.65e-128 385
Msa0252880 MtrunA17_Chr2g0311921 51.389 360 168 4 331 688 4 358 8.76e-126 377
Msa0252880 MtrunA17_Chr2g0311861 52.368 359 145 4 331 688 14 347 1.18e-124 374
Msa0252880 MtrunA17_Chr8g0336861 52.089 359 160 7 334 688 16 366 1.45e-124 375
Msa0252880 MtrunA17_Chr1g0167951 51.532 359 165 4 331 688 5 355 1.36e-121 367
Msa0252880 MtrunA17_Chr4g0066121 50.418 359 166 8 334 688 16 366 1.73e-120 364
Msa0252880 MtrunA17_Chr6g0472861 49.333 375 173 8 326 690 8 375 7.23e-119 360
Msa0252880 MtrunA17_Chr1g0167911 51.471 340 158 4 331 670 5 337 8.86e-119 359
Msa0252880 MtrunA17_Chr1g0167961 51.289 349 162 5 321 668 10 351 7.19e-118 357
Msa0252880 MtrunA17_Chr7g0225881 48.626 364 177 5 330 688 12 370 3.63e-113 345
Msa0252880 MtrunA17_Chr7g0235981 49.307 361 147 5 330 689 3 328 3.56e-112 341
Msa0252880 MtrunA17_Chr1g0184241 49.030 361 171 5 330 688 18 367 6.92e-112 342
Msa0252880 MtrunA17_Chr4g0011311 56.569 274 117 1 330 603 17 288 5.76e-111 337
Msa0252880 MtrunA17_Chr8g0362741 56.204 274 103 3 330 603 17 273 9.01e-104 318
Msa0252880 MtrunA17_Chr1g0167931 47.740 354 139 6 331 683 5 313 6.49e-102 314
Msa0252880 MtrunA17_Chr7g0266651 39.266 354 210 3 330 683 8 356 8.76e-89 282
Msa0252880 MtrunA17_Chr1g0161081 40.782 358 202 3 330 686 21 369 2.15e-82 265
Msa0252880 MtrunA17_Chr1g0161111 41.061 358 201 3 330 686 80 428 3.52e-81 264
Msa0252880 MtrunA17_Chr1g0161041 40.223 358 204 3 330 686 44 392 2.11e-80 261
Msa0252880 MtrunA17_Chr8g0336831 47.186 231 116 3 334 562 16 242 4.93e-72 234
Msa0252880 MtrunA17_Chr8g0364161 56.069 173 74 1 324 496 11 181 1.54e-64 211
Msa0252880 MtrunA17_Chr2g0311751 71.014 138 40 0 357 494 2 139 6.46e-64 209
Msa0252880 MtrunA17_Chr8g0336871 58.333 180 64 3 506 684 1 170 5.55e-62 204
Msa0252880 MtrunA17_Chr8g0336801 60.000 160 59 2 530 688 1 156 6.48e-61 201
Msa0252880 MtrunA17_Chr7g0242551 33.819 343 203 8 341 669 10 342 1.21e-54 191
Msa0252880 MtrunA17_Chr4g0006371 31.844 358 215 7 341 677 9 358 9.14e-54 189
Msa0252880 MtrunA17_Chr6g0455481 36.792 318 171 11 371 677 32 330 2.02e-52 184
Msa0252880 MtrunA17_Chr3g0128001 35.099 302 180 5 381 678 37 326 1.13e-51 182
Msa0252880 MtrunA17_Chr5g0426891 31.884 345 216 10 345 682 3 335 1.85e-51 182
Msa0252880 MtrunA17_Chr5g0412651 35.974 303 178 6 381 675 37 331 1.37e-50 179
Msa0252880 MtrunA17_Chr8g0345831 33.444 302 189 4 381 679 41 333 4.12e-50 178
Msa0252880 MtrunA17_Chr1g0179801 33.623 345 206 7 345 676 26 360 1.85e-49 177
Msa0252880 MtrunA17_Chr7g0235991 52.288 153 73 0 371 523 10 162 1.86e-49 171
Msa0252880 MtrunA17_Chr5g0412671 36.275 306 171 7 381 678 37 326 1.09e-48 174
Msa0252880 MtrunA17_Chr5g0412681 33.013 312 185 6 381 684 32 327 2.13e-48 173
Msa0252880 MtrunA17_Chr4g0045441 33.033 333 188 9 382 690 26 347 2.18e-48 174
Msa0252880 MtrunA17_Chr1g0184121 35.548 301 175 5 381 674 36 324 2.55e-48 173
Msa0252880 MtrunA17_Chr7g0265221 32.951 349 203 7 345 672 25 363 1.08e-47 172
Msa0252880 MtrunA17_Chr8g0375571 31.198 359 222 9 345 692 10 354 1.49e-47 171
Msa0252880 MtrunA17_Chr5g0437181 31.768 362 225 11 337 687 5 355 1.50e-46 169
Msa0252880 MtrunA17_Chr7g0220001 33.770 305 178 8 381 677 40 328 1.69e-46 168
Msa0252880 MtrunA17_Chr1g0184111 33.555 301 181 5 381 674 36 324 1.90e-46 168
Msa0252880 MtrunA17_Chr3g0126741 31.897 348 200 11 334 670 21 342 3.13e-46 168
Msa0252880 MtrunA17_Chr7g0220011 34.628 309 170 8 381 677 38 326 3.28e-46 167
Msa0252880 MtrunA17_Chr1g0184161 31.922 307 179 7 381 675 37 325 4.53e-46 167
Msa0252880 MtrunA17_Chr2g0311631 31.988 347 190 11 345 670 21 342 4.98e-46 167
Msa0252880 MtrunA17_Chr3g0093761 33.628 339 205 9 345 677 17 341 9.11e-46 166
Msa0252880 MtrunA17_Chr8g0336791 41.758 182 100 3 334 513 16 193 1.13e-45 161
Msa0252880 MtrunA17_Chr1g0184151 33.667 300 183 6 381 675 37 325 1.32e-45 166
Msa0252880 MtrunA17_Chr3g0113641 30.303 363 229 10 337 687 6 356 3.65e-45 165
Msa0252880 MtrunA17_Chr7g0265351 33.441 311 178 7 377 677 34 325 9.47e-45 163
Msa0252880 MtrunA17_Chr1g0184101 31.250 320 191 7 381 688 37 339 4.76e-44 161
Msa0252880 MtrunA17_Chr2g0319491 32.646 291 181 3 379 669 30 305 6.23e-44 160
Msa0252880 MtrunA17_Chr4g0045431 30.723 332 197 8 382 690 26 347 6.45e-44 161
Msa0252880 MtrunA17_Chr3g0093751 31.953 338 213 7 345 677 17 342 1.02e-43 160
Msa0252880 MtrunA17_Chr3g0093741 30.882 340 214 8 345 677 17 342 1.78e-43 160
Msa0252880 MtrunA17_Chr5g0421041 30.372 349 214 12 345 683 12 341 1.39e-42 157
Msa0252880 MtrunA17_Chr2g0314381 27.954 347 229 8 345 683 41 374 1.41e-42 158
Msa0252880 MtrunA17_Chr8g0375701 30.000 360 226 8 334 682 4 348 1.51e-42 157
Msa0252880 MtrunA17_Chr5g0423221 31.073 354 218 10 345 688 36 373 4.03e-42 157
Msa0252880 MtrunA17_Chr2g0314391 27.684 354 235 8 345 690 35 375 4.70e-42 157
Msa0252880 MtrunA17_Chr1g0168001 44.048 168 89 3 331 494 5 171 6.56e-42 150
Msa0252880 MtrunA17_Chr3g0121141 33.333 306 162 12 381 670 3 282 8.37e-42 154
Msa0252880 MtrunA17_Chr2g0314401 29.412 357 221 11 345 688 16 354 8.63e-42 155
Msa0252880 MtrunA17_Chr2g0289341 30.744 309 176 10 383 674 5 292 1.36e-41 154
Msa0252880 MtrunA17_Chr4g0045471 29.971 347 201 9 375 690 13 348 1.96e-41 154
Msa0252880 MtrunA17_Chr5g0421101 29.429 350 223 8 345 686 12 345 3.53e-41 154
Msa0252880 MtrunA17_Chr8g0375601 29.341 334 216 9 346 670 11 333 5.97e-41 153
Msa0252880 MtrunA17_Chr7g0239111 29.605 304 194 6 382 678 55 345 7.78e-41 153
Msa0252880 MtrunA17_Chr1g0162351 29.874 318 188 8 381 673 68 375 7.93e-41 154
Msa0252880 MtrunA17_Chr5g0439011 31.229 301 181 9 380 670 3 287 1.13e-40 151
Msa0252880 MtrunA17_Chr5g0420941 29.888 358 223 11 345 692 10 349 1.26e-40 152
Msa0252880 MtrunA17_Chr3g0102041 32.549 255 165 3 382 630 39 292 1.47e-40 152
Msa0252880 MtrunA17_Chr8g0371931 33.852 257 159 4 382 630 39 292 1.52e-40 152
Msa0252880 MtrunA17_Chr4g0045411 29.851 335 193 11 381 690 29 346 2.91e-40 151
Msa0252880 MtrunA17_Chr8g0370721 32.399 321 197 8 376 688 46 354 2.97e-40 151
Msa0252880 MtrunA17_Chr5g0424201 29.429 333 213 10 351 675 14 332 3.96e-40 150
Msa0252880 MtrunA17_Chr5g0423191 31.356 354 214 13 346 688 13 348 4.49e-40 150
Msa0252880 MtrunA17_Chr1g0162321 29.874 318 188 8 381 673 68 375 5.81e-40 151
Msa0252880 MtrunA17_Chr5g0423201 30.878 353 220 9 345 688 12 349 6.46e-40 150
Msa0252880 MtrunA17_Chr5g0421091 31.092 357 200 14 345 684 10 337 7.02e-40 150
Msa0252880 MtrunA17_Chr7g0239101 29.762 336 209 8 345 670 19 337 7.92e-40 150
Msa0252880 MtrunA17_Chr8g0371921 34.241 257 158 4 382 630 39 292 1.55e-39 149
Msa0252880 MtrunA17_Chr5g0421011 29.915 351 225 9 345 688 12 348 1.63e-39 149
Msa0252880 MtrunA17_Chr5g0420981 30.029 343 216 11 345 678 17 344 2.23e-39 149
Msa0252880 MtrunA17_Chr8g0375671 26.426 333 225 8 345 669 17 337 2.65e-39 149
Msa0252880 MtrunA17_Chr3g0125201 32.308 260 160 6 380 631 1 252 3.59e-39 147
Msa0252880 MtrunA17_Chr7g0250511 29.499 339 219 7 348 679 16 341 4.19e-39 147
Msa0252880 MtrunA17_Chr5g0420951 27.933 358 231 9 345 691 17 358 9.31e-39 147
Msa0252880 MtrunA17_Chr5g0423251 29.745 353 223 10 345 688 12 348 1.08e-38 147
Msa0252880 MtrunA17_Chr8g0370711 32.765 293 182 6 376 662 46 329 2.11e-38 145
Msa0252880 MtrunA17_Chr1g0162361 30.606 330 191 10 382 690 27 339 2.12e-38 145
Msa0252880 MtrunA17_Chr5g0405411 32.685 257 162 4 382 630 39 292 2.14e-38 146
Msa0252880 MtrunA17_Chr8g0365241 28.655 342 221 8 345 678 22 348 2.19e-38 146
Msa0252880 MtrunA17_Chr8g0364171 56.364 110 48 0 494 603 17 126 2.61e-38 139
Msa0252880 MtrunA17_Chr4g0045451 28.144 334 203 10 382 690 26 347 3.09e-38 145
Msa0252880 MtrunA17_Chr1g0204181 32.797 311 179 6 379 672 56 353 5.06e-38 145
Msa0252880 MtrunA17_Chr4g0050031 28.972 321 198 9 382 688 62 366 5.66e-38 145
Msa0252880 MtrunA17_Chr1g0167921 56.034 116 51 0 496 611 50 165 6.57e-38 139
Msa0252880 MtrunA17_Chr5g0398291 28.280 343 224 8 346 674 8 342 7.89e-38 144
Msa0252880 MtrunA17_Chr3g0109041 28.249 354 225 9 338 677 2 340 9.92e-38 144
Msa0252880 MtrunA17_Chr5g0420901 29.885 348 215 10 345 684 11 337 1.08e-37 144
Msa0252880 MtrunA17_Chr8g0375681 30.466 279 180 5 416 688 15 285 1.95e-37 141
Msa0252880 MtrunA17_Chr3g0145171 30.065 306 197 7 376 675 46 340 3.68e-37 142
Msa0252880 MtrunA17_Chr1g0162191 29.904 311 199 7 373 678 38 334 7.17e-37 141
Msa0252880 MtrunA17_Chr2g0296371 31.338 284 181 4 401 678 70 345 7.44e-37 142
Msa0252880 MtrunA17_Chr7g0239121 29.545 308 190 9 382 678 51 342 2.76e-36 140
Msa0252880 MtrunA17_Chr2g0332191 29.014 355 202 13 352 683 23 350 1.41e-35 138
Msa0252880 MtrunA17_Chr7g0239821 29.577 284 181 7 403 678 82 354 1.90e-35 138
Msa0252880 MtrunA17_Chr3g0114861 30.205 341 208 8 346 675 6 327 1.94e-35 137
Msa0252880 MtrunA17_Chr4g0064781 30.744 309 195 8 371 673 39 334 2.20e-35 137
Msa0252880 MtrunA17_Chr6g0474391 29.966 297 188 5 379 663 61 349 6.91e-35 136
Msa0252880 MtrunA17_Chr5g0423211 28.857 350 219 10 345 682 12 343 7.22e-35 135
Msa0252880 MtrunA17_Chr3g0087031 26.934 349 239 6 345 688 23 360 1.52e-34 135
Msa0252880 MtrunA17_Chr5g0424211 29.022 317 197 11 355 659 16 316 2.28e-34 134
Msa0252880 MtrunA17_Chr2g0311821 68.421 95 24 2 386 478 11 101 8.82e-34 125
Msa0252880 MtrunA17_Chr5g0420721 32.365 241 146 6 462 694 25 256 3.27e-33 128
Msa0252880 MtrunA17_Chr8g0351101 30.492 305 193 6 379 672 51 347 3.60e-33 131
Msa0252880 MtrunA17_Chr7g0232161 31.047 277 179 6 345 615 24 294 1.75e-32 128
Msa0252880 MtrunA17_Chr6g0488511 26.882 279 184 8 380 648 1 269 4.13e-32 126
Msa0252880 MtrunA17_Chr1g0191201 27.215 316 196 7 376 672 47 347 1.46e-31 127
Msa0252880 MtrunA17_Chr3g0125421 27.507 349 210 8 373 691 27 362 5.42e-31 125
Msa0252880 MtrunA17_Chr7g0239091 27.660 282 187 4 399 678 174 440 1.46e-30 125
Msa0252880 MtrunA17_Chr3g0145181 28.228 333 221 9 345 669 12 334 1.74e-30 123
Msa0252880 MtrunA17_Chr4g0045461 27.108 332 208 7 382 690 26 346 2.52e-30 123
Msa0252880 MtrunA17_Chr3g0126761 36.667 180 104 3 493 670 42 213 4.51e-30 119
Msa0252880 MtrunA17_Chr3g0114871 33.197 244 143 7 371 603 31 265 4.67e-30 120
Msa0252880 MtrunA17_Chr3g0092531 28.803 309 186 9 382 676 6 294 5.99e-30 120
Msa0252880 MtrunA17_Chr3g0145201 28.710 310 203 9 368 669 670 969 7.94e-30 126
Msa0252880 MtrunA17_Chr3g0130391 28.242 347 201 11 348 669 37 360 9.38e-30 121
Msa0252880 MtrunA17_Chr7g0239071 28.676 272 181 4 404 670 19 282 1.54e-29 119
Msa0252880 MtrunA17_Chr4g0061581 29.155 343 215 12 10 339 14 341 3.12e-29 123
Msa0252880 MtrunA17_Chr2g0314371 27.124 306 181 10 345 618 16 311 7.75e-28 115
Msa0252880 MtrunA17_Chr8g0384481 26.748 329 213 8 373 686 50 365 9.10e-28 115
Msa0252880 MtrunA17_Chr4g0075471 39.855 138 74 3 519 655 9 138 1.68e-26 106
Msa0252880 MtrunA17_Chr1g0148771 26.048 334 203 10 374 692 55 359 1.18e-25 109
Msa0252880 MtrunA17_Chr7g0247741 28.481 316 202 8 373 679 2 302 3.61e-25 107
Msa0252880 MtrunA17_Chr5g0394071 35.028 177 101 2 493 669 1 163 3.78e-25 103
Msa0252880 MtrunA17_Chr8g0384461 25.000 352 226 10 341 672 6 339 9.68e-25 106
Msa0252880 MtrunA17_Chr6g0486831 26.586 331 204 9 375 676 7 327 1.27e-24 105
Msa0252880 MtrunA17_Chr1g0170631 33.168 202 119 6 493 688 1 192 1.36e-24 102
Msa0252880 MtrunA17_Chr8g0348951 29.283 321 183 11 381 679 4 302 1.44e-24 105
Msa0252880 MtrunA17_Chr5g0420881 36.667 150 86 4 541 688 2 144 3.23e-24 99.4
Msa0252880 MtrunA17_Chr1g0161101 41.143 175 87 3 476 649 342 501 3.56e-24 107
Msa0252880 MtrunA17_Chr2g0285931 26.074 326 199 12 382 687 28 331 4.17e-24 104
Msa0252880 MtrunA17_Chr1g0194321 28.655 342 188 13 382 692 20 336 5.64e-24 103
Msa0252880 MtrunA17_Chr4g0068891 27.302 315 203 8 386 687 18 319 5.84e-24 103
Msa0252880 MtrunA17_Chr3g0105281 26.562 256 167 5 382 628 34 277 1.09e-23 102
Msa0252880 MtrunA17_Chr8g0358941 25.617 324 204 9 382 687 27 331 1.18e-23 102
Msa0252880 MtrunA17_Chr5g0407731 25.962 312 180 12 382 675 33 311 6.42e-23 100
Msa0252880 MtrunA17_Chr2g0313111 28.077 260 157 9 381 626 27 270 9.62e-23 100
Msa0252880 MtrunA17_Chr1g0192821 25.000 368 236 11 8 360 15 357 3.46e-22 101
Msa0252880 MtrunA17_Chr3g0092581 32.558 172 106 3 507 676 3 166 7.55e-22 93.6
Msa0252880 MtrunA17_Chr1g0158011 32.432 222 137 7 473 689 49 262 9.11e-22 95.5
Msa0252880 MtrunA17_Chr4g0037611 40.476 126 72 3 505 628 1 125 1.05e-21 93.2
Msa0252880 MtrunA17_Chr8g0336841 49.425 87 39 2 603 688 9 91 1.11e-21 90.1
Msa0252880 MtrunA17_Chr4g0064771 31.414 191 115 5 475 663 13 189 2.93e-21 92.8
Msa0252880 MtrunA17_Chr4g0052251 26.708 322 201 11 382 687 29 331 3.76e-21 95.5
Msa0252880 MtrunA17_Chr7g0233661 37.008 127 67 1 543 669 24 137 5.02e-21 90.5
Msa0252880 MtrunA17_Chr8g0389941 27.667 300 186 10 398 674 45 336 1.92e-20 93.6
Msa0252880 MtrunA17_Chr4g0074871 29.577 213 147 3 31 240 292 504 1.21e-19 94.4
Msa0252880 MtrunA17_Chr5g0407781 24.051 316 189 11 381 678 4 286 1.20e-18 87.4
Msa0252880 MtrunA17_Chr4g0053251 27.119 295 167 13 381 640 7 288 1.93e-18 87.0
Msa0252880 MtrunA17_Chr2g0319521 36.792 106 67 0 498 603 19 124 5.14e-18 81.3
Msa0252880 MtrunA17_Chr7g0219991 42.593 108 58 3 496 601 249 354 1.01e-17 85.5
Msa0252880 MtrunA17_Chr4g0009541 23.926 326 213 11 379 686 4 312 1.13e-17 84.7
Msa0252880 MtrunA17_Chr4g0004071 30.220 182 118 5 495 675 125 298 1.69e-17 84.0
Msa0252880 MtrunA17_Chr4g0066851 26.860 242 148 9 24 247 158 388 2.21e-17 86.7
Msa0252880 MtrunA17_Chr4g0066851 25.203 246 169 7 7 240 83 325 5.29e-16 82.0
Msa0252880 MtrunA17_Chr4g0066851 25.000 244 156 8 59 289 83 312 1.96e-14 77.0
Msa0252880 MtrunA17_Chr2g0311611 48.571 70 29 1 541 603 2 71 2.65e-17 77.0
Msa0252880 MtrunA17_Chr2g0286241 26.423 246 166 7 7 240 75 317 1.89e-16 83.6
Msa0252880 MtrunA17_Chr2g0286241 27.136 199 124 6 24 211 150 338 1.12e-15 80.9
Msa0252880 MtrunA17_Chr1g0207821 28.788 264 159 9 36 273 87 347 2.52e-16 83.2
Msa0252880 MtrunA17_Chr2g0293931 28.571 203 129 5 495 687 7 203 9.89e-16 76.6
Msa0252880 MtrunA17_Chr1g0158021 26.724 232 159 7 369 595 36 261 1.26e-15 77.4
Msa0252880 MtrunA17_Chr8g0375581 50.820 61 29 1 541 600 26 86 1.75e-15 72.0
Msa0252880 MtrunA17_Chr4g0055911 25.157 318 199 10 378 674 5 304 2.34e-15 77.8
Msa0252880 MtrunA17_Chr7g0272641 28.311 219 143 7 7 215 223 437 3.25e-15 79.3
Msa0252880 MtrunA17_Chr7g0272641 24.364 275 189 5 4 270 170 433 2.36e-14 76.6
Msa0252880 MtrunA17_Chr7g0272641 23.913 276 165 14 52 310 170 417 3.74e-11 66.6
Msa0252880 MtrunA17_Chr1g0198221 27.863 262 158 10 61 307 8 253 3.35e-15 79.0
Msa0252880 MtrunA17_Chr1g0198221 23.102 303 180 10 12 284 11 290 1.09e-12 70.9
Msa0252880 MtrunA17_Chr1g0197401 29.143 175 117 5 20 191 88 258 8.68e-15 77.8
Msa0252880 MtrunA17_Chr1g0197401 24.194 248 172 4 7 240 14 259 3.30e-11 66.2
Msa0252880 MtrunA17_Chr1g0197401 24.797 246 149 11 60 286 15 243 6.23e-11 65.5
Msa0252880 MtrunA17_Chr4g0004061 28.495 186 117 6 495 675 125 299 1.10e-14 75.9
Msa0252880 MtrunA17_Chr4g0055871 23.226 310 203 10 384 674 6 299 3.49e-13 71.2
Msa0252880 MtrunA17_Chr4g0009561 22.517 302 205 10 399 686 29 315 5.01e-13 70.9
Msa0252880 MtrunA17_Chr4g0002171 28.063 253 145 12 20 241 120 366 7.12e-13 71.2
Msa0252880 MtrunA17_Chr3g0138351 23.256 301 203 9 399 686 29 314 1.60e-12 69.3
Msa0252880 MtrunA17_Chr2g0297971 25.128 195 136 6 55 240 278 471 1.58e-11 67.4
Msa0252880 MtrunA17_Chr2g0297971 27.666 347 203 17 7 324 282 609 5.58e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0252880 AT3G07720.1 69.716 317 96 0 4 320 6 322 4.47e-166 480
Msa0252880 AT1G06620.1 55.432 359 154 3 331 688 12 365 6.58e-139 412
Msa0252880 AT5G59540.1 51.351 370 173 4 322 688 1 366 3.70e-130 389
Msa0252880 AT2G30840.1 53.719 363 159 5 330 688 5 362 1.93e-129 387
Msa0252880 AT5G59530.1 52.717 368 164 6 325 688 3 364 1.82e-127 382
Msa0252880 AT2G30830.1 51.923 364 160 6 330 688 5 358 1.83e-126 379
Msa0252880 AT1G06650.2 49.600 375 160 7 329 688 9 369 1.14e-124 375
Msa0252880 AT2G25450.1 52.066 363 168 4 327 688 2 359 2.15e-124 374
Msa0252880 AT1G06640.1 49.471 378 168 6 323 688 3 369 2.54e-124 374
Msa0252880 AT1G04350.1 51.934 362 164 5 330 688 6 360 4.99e-124 373
Msa0252880 AT2G30840.3 52.893 363 156 6 330 688 5 356 5.47e-124 373
Msa0252880 AT1G03410.2 49.861 361 174 4 331 688 5 361 3.96e-123 371
Msa0252880 AT1G03410.1 49.861 361 174 4 331 688 42 398 8.23e-123 372
Msa0252880 AT5G48180.1 53.354 328 151 2 1 328 1 326 1.31e-121 366
Msa0252880 AT3G61400.1 49.861 361 168 6 331 683 10 365 4.06e-119 361
Msa0252880 AT1G03400.1 48.189 359 173 3 331 688 5 351 1.27e-117 357
Msa0252880 AT1G06645.1 47.439 371 175 8 327 688 20 379 7.17e-115 350
Msa0252880 AT5G43450.1 48.276 348 173 4 325 671 3 344 2.21e-112 343
Msa0252880 AT5G43440.1 46.257 374 185 7 322 688 1 365 1.82e-111 341
Msa0252880 AT1G03400.2 44.703 387 173 4 331 688 5 379 6.09e-111 340
Msa0252880 AT1G04380.1 46.196 368 174 5 322 688 1 345 2.04e-110 338
Msa0252880 AT1G06620.2 56.618 272 117 1 331 602 12 282 6.79e-110 334
Msa0252880 AT3G16400.2 50.313 320 157 2 4 322 149 467 5.19e-107 333
Msa0252880 AT3G16400.1 50.313 320 157 2 4 322 149 467 5.19e-107 333
Msa0252880 AT3G16410.1 49.688 320 159 2 4 322 298 616 3.04e-106 336
Msa0252880 AT2G33070.1 50.313 320 157 2 4 322 150 468 1.55e-104 327
Msa0252880 AT2G33070.2 50.313 320 157 2 4 322 150 468 1.55e-104 327
Msa0252880 AT2G30840.2 54.909 275 122 2 330 602 5 279 1.93e-103 318
Msa0252880 AT2G33070.3 50.000 322 157 3 4 322 150 470 1.41e-102 322
Msa0252880 AT3G16390.2 49.688 320 156 4 4 322 149 464 1.20e-101 319
Msa0252880 AT3G16390.1 49.688 320 156 4 4 322 149 464 1.20e-101 319
Msa0252880 AT5G59540.2 51.056 284 137 2 322 603 1 284 5.18e-101 311
Msa0252880 AT1G06650.1 50.175 285 125 3 329 603 9 286 1.42e-97 303
Msa0252880 AT1G06640.2 47.883 307 136 4 323 612 3 302 8.59e-97 301
Msa0252880 AT1G06640.3 49.141 291 131 3 323 603 3 286 4.42e-96 298
Msa0252880 AT3G61400.2 50.000 280 132 4 331 603 10 288 5.61e-94 293
Msa0252880 AT1G54040.2 45.266 338 162 7 4 322 5 338 1.45e-91 288
Msa0252880 AT5G43450.2 47.552 286 147 2 325 609 3 286 1.62e-91 286
Msa0252880 AT5G43440.2 46.367 289 150 4 322 607 1 287 2.01e-89 281
Msa0252880 AT1G54040.3 45.399 326 156 6 15 322 11 332 5.12e-89 282
Msa0252880 AT1G04380.2 45.070 284 137 3 322 605 1 265 6.94e-84 266
Msa0252880 AT1G54040.1 45.038 262 123 5 78 322 1 258 9.15e-70 228
Msa0252880 AT3G13610.1 34.524 336 199 9 345 674 26 346 3.61e-57 198
Msa0252880 AT1G55290.1 33.923 339 198 10 345 674 25 346 5.49e-54 189
Msa0252880 AT4G10500.1 36.218 312 185 6 381 687 43 345 8.52e-54 189
Msa0252880 AT5G24530.1 35.000 300 182 4 383 678 39 329 5.90e-53 186
Msa0252880 AT2G36690.2 35.207 338 198 8 345 672 20 346 6.73e-53 187
Msa0252880 AT2G36690.1 35.207 338 198 8 345 672 20 346 6.73e-53 187
Msa0252880 AT4G10490.1 34.915 295 178 5 381 670 41 326 9.72e-53 186
Msa0252880 AT3G12900.1 32.733 333 209 8 345 674 21 341 3.28e-52 185
Msa0252880 AT5G05600.1 31.579 361 228 9 326 677 7 357 6.82e-52 184
Msa0252880 AT2G38240.1 32.647 340 207 10 339 669 5 331 3.91e-49 176
Msa0252880 AT3G11180.1 29.815 379 237 9 313 677 23 386 2.65e-45 167
Msa0252880 AT3G11180.2 29.815 379 237 9 313 677 23 386 3.22e-45 167
Msa0252880 AT2G44800.1 31.519 349 226 6 332 676 2 341 3.24e-43 160
Msa0252880 AT4G16330.2 33.443 305 177 7 381 677 66 352 1.02e-42 159
Msa0252880 AT3G19000.1 30.120 332 201 7 382 693 32 352 4.16e-42 157
Msa0252880 AT3G51240.1 34.241 257 158 4 382 630 38 291 1.60e-41 155
Msa0252880 AT3G55970.1 30.252 357 223 12 336 677 4 349 2.16e-41 155
Msa0252880 AT1G78550.1 27.647 340 224 9 351 682 24 349 8.66e-41 153
Msa0252880 AT3G21420.1 32.591 359 217 9 346 690 17 364 1.64e-40 152
Msa0252880 AT5G08640.2 31.949 313 177 9 381 678 42 333 3.09e-40 151
Msa0252880 AT5G08640.1 31.949 313 177 9 381 678 42 333 3.09e-40 151
Msa0252880 AT1G17020.1 29.885 348 222 11 345 682 16 351 4.85e-40 151
Msa0252880 AT4G25420.1 29.944 354 220 6 337 672 11 354 1.00e-39 150
Msa0252880 AT1G77330.1 31.955 266 155 8 380 631 1 254 2.93e-39 147
Msa0252880 AT4G22880.1 29.360 344 220 10 346 674 7 342 5.41e-39 148
Msa0252880 AT4G22880.2 29.360 344 220 10 346 674 7 342 5.41e-39 148
Msa0252880 AT4G22880.3 29.360 344 220 10 346 674 7 342 5.41e-39 148
Msa0252880 AT1G62380.1 31.169 308 179 10 380 674 5 292 8.43e-39 146
Msa0252880 AT1G17010.1 28.324 346 230 8 345 682 16 351 1.55e-38 147
Msa0252880 AT5G05600.2 31.010 287 186 7 326 603 7 290 1.60e-38 145
Msa0252880 AT1G05010.1 31.250 304 189 10 381 674 3 296 2.12e-38 145
Msa0252880 AT1G12010.1 29.618 314 178 10 380 675 5 293 4.37e-38 144
Msa0252880 AT3G60290.1 31.737 334 215 6 349 678 19 343 5.06e-38 145
Msa0252880 AT1G60980.1 29.301 372 225 7 320 671 5 358 1.11e-37 145
Msa0252880 AT4G25310.1 30.000 290 182 7 401 682 70 346 1.54e-37 144
Msa0252880 AT5G63590.1 32.573 307 181 9 374 669 6 297 3.44e-37 141
Msa0252880 AT4G25300.1 27.457 346 232 9 345 682 15 349 7.82e-37 142
Msa0252880 AT3G19010.1 29.870 308 180 8 377 662 23 316 1.29e-35 138
Msa0252880 AT3G19010.4 29.870 308 180 8 377 662 23 316 1.29e-35 138
Msa0252880 AT5G07480.1 31.034 319 191 9 375 678 38 342 1.43e-35 138
Msa0252880 AT5G63600.1 31.561 301 179 9 378 670 29 310 5.61e-35 135
Msa0252880 AT5G20400.1 29.450 309 202 6 373 675 36 334 8.40e-35 135
Msa0252880 AT5G07200.1 29.641 334 210 7 334 654 14 335 3.75e-34 135
Msa0252880 AT5G63600.2 31.457 302 179 10 378 670 29 311 9.25e-34 132
Msa0252880 AT4G21200.1 29.721 323 193 8 351 669 21 313 1.20e-33 132
Msa0252880 AT1G49390.1 27.586 348 231 6 333 674 3 335 1.74e-33 132
Msa0252880 AT1G78550.2 27.338 278 183 7 413 682 5 271 3.17e-33 129
Msa0252880 AT5G12270.1 30.820 305 183 8 382 674 56 344 7.59e-33 130
Msa0252880 AT3G19010.3 29.167 288 178 6 377 662 23 286 2.35e-32 128
Msa0252880 AT4G25420.2 30.450 289 180 5 337 607 11 296 2.57e-32 127
Msa0252880 AT1G50960.1 30.451 266 179 5 365 628 25 286 4.87e-32 127
Msa0252880 AT3G19000.2 31.818 242 141 6 382 603 32 269 6.53e-32 125
Msa0252880 AT1G80330.1 30.380 316 173 11 381 674 48 338 8.74e-32 127
Msa0252880 AT5G20550.1 29.236 301 198 6 369 662 32 324 1.46e-31 126
Msa0252880 AT5G51810.1 29.836 305 191 5 379 672 60 352 1.58e-31 127
Msa0252880 AT1G15550.1 28.882 322 179 13 381 679 56 350 2.54e-31 126
Msa0252880 AT1G18610.1 28.869 336 209 8 19 337 23 345 5.28e-31 128
Msa0252880 AT1G18610.1 28.679 265 163 7 66 320 18 266 2.52e-17 86.3
Msa0252880 AT1G18610.2 28.869 336 209 8 19 337 23 345 5.28e-31 128
Msa0252880 AT1G18610.2 28.679 265 163 7 66 320 18 266 2.52e-17 86.3
Msa0252880 AT4G16330.1 33.953 215 127 4 467 677 43 246 5.50e-31 122
Msa0252880 AT3G55970.2 30.035 283 181 9 336 604 4 283 1.83e-30 122
Msa0252880 AT5G54000.2 28.966 290 192 5 379 662 43 324 2.47e-30 123
Msa0252880 AT3G51240.2 35.519 183 112 2 454 630 25 207 1.03e-29 119
Msa0252880 AT2G19590.1 28.315 279 179 10 379 648 8 274 1.23e-29 120
Msa0252880 AT5G63595.1 27.797 295 165 7 374 652 17 279 1.36e-29 119
Msa0252880 AT1G80340.1 29.375 320 179 11 374 673 42 334 1.72e-28 117
Msa0252880 AT1G74150.3 25.849 383 245 9 8 374 3 362 2.49e-28 120
Msa0252880 AT1G74150.3 31.395 172 105 5 7 166 111 281 2.54e-11 67.4
Msa0252880 AT1G74150.2 26.042 384 244 10 8 374 3 363 2.07e-27 117
Msa0252880 AT1G74150.2 31.395 172 105 5 7 166 111 281 2.12e-11 67.4
Msa0252880 AT4G23340.1 28.889 315 202 8 373 679 1 301 2.08e-27 114
Msa0252880 AT1G74150.1 26.042 384 244 10 8 374 3 363 2.21e-27 117
Msa0252880 AT1G74150.1 31.395 172 105 5 7 166 111 281 2.16e-11 67.4
Msa0252880 AT5G51810.2 31.381 239 148 4 379 606 60 293 2.50e-27 113
Msa0252880 AT5G54000.1 29.365 252 164 5 417 662 1 244 4.94e-26 108
Msa0252880 AT1G49390.2 28.409 264 175 5 417 674 1 256 8.27e-26 107
Msa0252880 AT5G43935.1 28.231 294 182 10 382 673 19 285 1.55e-25 107
Msa0252880 AT1G78440.1 27.778 324 195 11 382 687 18 320 1.69e-25 108
Msa0252880 AT3G19010.2 30.556 252 142 10 377 604 23 265 2.06e-25 107
Msa0252880 AT4G21690.1 29.375 320 168 14 382 673 47 336 5.35e-25 107
Msa0252880 AT5G63580.2 31.304 230 144 6 381 603 18 240 1.65e-24 103
Msa0252880 AT1G30040.1 27.385 325 194 12 381 687 30 330 1.65e-24 105
Msa0252880 AT4G25300.2 31.217 189 121 3 496 682 74 255 2.06e-24 103
Msa0252880 AT5G63580.1 32.301 226 139 7 381 599 18 236 2.20e-24 103
Msa0252880 AT2G19590.2 28.689 244 155 9 414 648 26 259 3.56e-24 103
Msa0252880 AT1G44090.1 27.946 297 191 7 373 656 54 340 1.65e-23 103
Msa0252880 AT4G25310.2 24.913 289 170 7 401 682 70 318 4.35e-23 101
Msa0252880 AT5G07480.2 32.663 199 115 6 489 678 45 233 2.12e-22 97.4
Msa0252880 AT1G74150.4 26.061 330 209 8 56 374 42 347 2.83e-22 101
Msa0252880 AT1G74150.4 25.862 232 161 6 8 230 46 275 1.93e-15 80.5
Msa0252880 AT1G74150.4 31.056 161 104 4 7 161 95 254 1.40e-11 68.2
Msa0252880 AT4G23340.2 34.211 190 110 5 498 679 1 183 3.20e-22 95.9
Msa0252880 AT1G47990.1 28.395 324 193 13 382 687 15 317 6.45e-22 97.8
Msa0252880 AT2G34555.1 25.767 326 195 10 382 687 27 325 5.03e-21 95.5
Msa0252880 AT5G51310.1 25.460 326 195 10 380 679 3 306 2.06e-20 93.6
Msa0252880 AT1G14130.1 26.280 293 185 9 382 665 9 279 1.94e-19 90.1
Msa0252880 AT1G14120.2 26.214 309 195 9 382 680 8 293 2.02e-19 90.1
Msa0252880 AT1G14120.1 26.214 309 195 9 382 680 8 293 2.02e-19 90.1
Msa0252880 AT1G14120.3 26.214 309 195 9 382 680 8 293 2.02e-19 90.1
Msa0252880 AT1G02400.1 28.529 340 199 16 371 689 13 329 3.68e-19 89.7
Msa0252880 AT5G58660.1 25.651 269 155 9 380 616 32 287 6.31e-19 89.4
Msa0252880 AT5G18590.2 28.390 236 152 7 24 247 140 370 1.06e-18 91.3
Msa0252880 AT5G18590.2 26.122 245 168 5 7 240 65 307 3.99e-17 86.3
Msa0252880 AT5G18590.2 25.087 287 177 10 16 288 32 294 7.58e-15 79.0
Msa0252880 AT5G18590.1 28.390 236 152 7 24 247 140 370 1.06e-18 91.3
Msa0252880 AT5G18590.1 26.122 245 168 5 7 240 65 307 3.99e-17 86.3
Msa0252880 AT5G18590.1 25.087 287 177 10 16 288 32 294 7.58e-15 79.0
Msa0252880 AT2G06960.1 36.429 140 64 4 539 676 29 145 2.00e-17 80.1
Msa0252880 AT3G05420.2 26.429 280 182 7 4 270 168 436 5.86e-17 85.5
Msa0252880 AT3G05420.1 26.429 280 182 7 4 270 167 435 6.79e-17 85.5
Msa0252880 AT3G50210.4 26.923 286 177 11 381 636 7 290 2.09e-16 81.6
Msa0252880 AT3G50210.1 26.923 286 177 11 381 636 7 290 2.09e-16 81.6
Msa0252880 AT3G50210.3 26.923 286 177 11 381 636 7 290 2.09e-16 81.6
Msa0252880 AT4G04670.1 26.786 224 157 4 20 240 324 543 4.39e-16 83.2
Msa0252880 AT4G04670.1 32.298 161 106 2 1 161 356 513 6.99e-16 82.4
Msa0252880 AT4G04670.1 28.000 175 121 3 69 240 321 493 4.00e-11 67.0
Msa0252880 AT3G46490.1 25.234 321 201 9 378 674 15 320 5.04e-16 80.5
Msa0252880 AT3G47190.1 24.016 254 163 7 380 616 30 270 1.11e-15 79.3
Msa0252880 AT5G50310.1 26.718 262 157 8 30 269 94 342 4.24e-15 79.7
Msa0252880 AT1G52820.1 26.203 187 123 5 495 677 128 303 7.52e-15 76.6
Msa0252880 AT3G46490.2 26.136 264 164 7 378 617 15 271 1.78e-14 75.5
Msa0252880 AT5G04420.2 28.571 231 151 8 20 240 101 327 2.45e-14 76.6
Msa0252880 AT5G04420.1 28.571 231 151 8 20 240 101 327 2.45e-14 76.6
Msa0252880 AT5G04420.3 28.571 231 151 8 20 240 101 327 2.45e-14 76.6
Msa0252880 AT5G58660.2 24.219 256 149 9 380 603 32 274 2.60e-14 74.3
Msa0252880 AT2G36360.2 27.586 261 160 8 61 307 8 253 2.65e-14 76.6
Msa0252880 AT2G36360.1 27.586 261 160 8 61 307 8 253 2.65e-14 76.6
Msa0252880 AT2G36360.3 27.586 261 160 8 61 307 8 253 2.83e-14 76.6
Msa0252880 AT2G36360.4 27.586 261 160 8 61 307 8 253 2.96e-14 76.6
Msa0252880 AT5G27630.2 24.643 280 187 7 4 270 168 436 7.41e-14 75.5
Msa0252880 AT5G27630.3 25.357 280 185 8 4 270 168 436 9.83e-14 75.1
Msa0252880 AT5G27630.1 24.643 280 187 7 4 270 168 436 1.09e-13 75.1
Msa0252880 AT5G27630.4 24.643 280 187 7 4 270 168 436 1.15e-13 75.1
Msa0252880 AT4G16765.6 28.646 192 120 6 492 674 57 240 1.52e-13 71.6
Msa0252880 AT4G16765.1 28.646 192 120 6 492 674 57 240 1.52e-13 71.6
Msa0252880 AT4G16765.2 28.646 192 120 6 492 674 57 240 1.52e-13 71.6
Msa0252880 AT3G46500.7 26.820 261 170 7 375 617 7 264 2.97e-13 71.6
Msa0252880 AT1G35190.1 25.532 329 201 12 375 674 2 315 8.18e-13 70.5
Msa0252880 AT4G16765.3 29.609 179 109 6 492 661 57 227 8.29e-13 68.9
Msa0252880 AT1G51550.1 27.888 251 146 12 21 241 123 368 2.10e-12 70.5
Msa0252880 AT1G68050.1 26.453 344 210 18 7 326 291 615 3.09e-12 70.5
Msa0252880 AT1G68050.1 27.928 222 141 11 55 265 287 500 5.81e-12 69.3
Msa0252880 AT5G57360.1 30.526 285 156 16 7 263 279 549 3.75e-12 70.1
Msa0252880 AT2G36360.5 26.667 270 160 9 61 307 8 262 4.83e-12 69.3
Msa0252880 AT5G57360.2 30.526 285 156 16 7 263 279 549 4.98e-12 69.7
Msa0252880 AT4G16765.5 32.812 128 73 4 552 674 75 194 1.14e-11 65.1
Msa0252880 AT2G18915.1 28.571 343 201 19 7 323 270 594 2.04e-11 67.8
Msa0252880 AT2G18915.2 28.571 343 201 19 7 323 280 604 2.29e-11 67.4
Msa0252880 AT3G50210.2 29.375 160 106 4 484 636 49 208 3.62e-11 64.7
Msa0252880 AT3G46500.3 34.109 129 77 3 498 618 63 191 9.96e-11 62.8

Find 196 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCACCACCCATTTCTTTA+AGG 0.090436 2_2:+44474916 None:intergenic
TGAGAAATGGGGATTCTTTC+AGG 0.171438 2_2:-44475809 Msa0252880:CDS
CAGGAAGGCTCAATGATTTA+TGG 0.247369 2_2:-44476969 Msa0252880:CDS
GTCTTGATAAAGAGTAAAAT+TGG 0.254512 2_2:+44475654 None:intergenic
GATGAACACTGAAGCGAAAT+TGG 0.257119 2_2:+44478494 None:intergenic
CTTTAAGGTGAAAGCGATTA+AGG 0.259578 2_2:+44474931 None:intergenic
GGAGAAACCATCTATGTATT+TGG 0.275442 2_2:-44477159 Msa0252880:CDS
TGGAATTCCAGTTCATGTTT+TGG 0.293851 2_2:-44475776 Msa0252880:CDS
ATGAACTACCACCGGTTTGC+AGG 0.303739 2_2:-44475570 Msa0252880:intron
ATCAATGACGATTATATATT+AGG 0.309240 2_2:-44478548 Msa0252880:five_prime_UTR
TCGCTTTCACCTTAAAGAAA+TGG 0.311659 2_2:-44474925 Msa0252880:CDS
TCCTCACCTTAGCATCTTGC+TGG 0.317725 2_2:+44475722 None:intergenic
CGTGGGTGGTGCGCATTTGC+CGG 0.322365 2_2:-44476550 Msa0252880:CDS
TTGACACTAAAACCAACAAT+TGG 0.329490 2_2:-44477092 Msa0252880:CDS
TTCAAAATGCAAGTGAGAAA+TGG 0.333502 2_2:-44475822 Msa0252880:CDS
AAAGAAGTATCTCTATATAT+TGG 0.335206 2_2:+44474026 None:intergenic
AGGGTTGCAGCTGAAATTCT+TGG 0.338039 2_2:+44474134 None:intergenic
GGTGGTAGTTCATCAGCTTT+AGG 0.343905 2_2:+44475580 None:intergenic
CCATGAAGTATCGCCATTGC+TGG 0.348078 2_2:+44478453 None:intergenic
TTGATTGGTCCAATCACTTT+CGG 0.348600 2_2:+44474074 None:intergenic
ATTGATTTACCTCCCATTCA+TGG 0.351377 2_2:-44474744 Msa0252880:CDS
TCAAAATGCAAGTGAGAAAT+GGG 0.362845 2_2:-44475821 Msa0252880:CDS
CGCTTTCACCTTAAAGAAAT+GGG 0.363801 2_2:-44474924 Msa0252880:CDS
ACGTGTAACTTGTTATCAAC+GGG 0.364996 2_2:+44477270 None:intergenic
GGGAAACACATAATTGTATA+TGG 0.366421 2_2:-44476709 Msa0252880:CDS
GTCCAAGGACTCATAGAAAA+TGG 0.369194 2_2:-44475997 Msa0252880:CDS
TCAGATAAAAGTTCCTTGAT+TGG 0.373452 2_2:+44474059 None:intergenic
GATTGTCATGAAGAATTTGT+AGG 0.378688 2_2:+44474772 None:intergenic
ATCTCATCCAAAACATGAAC+TGG 0.379921 2_2:+44475769 None:intergenic
GTCCCTACAATTGACTTAAC+AGG 0.381724 2_2:-44475889 Msa0252880:CDS
GCGCACCACCCACGTGGCCC+TGG 0.395028 2_2:+44476559 None:intergenic
TGGTCAGTAGCCGATGTATC+CGG 0.396432 2_2:-44477225 Msa0252880:CDS
TCTTCCACCAAATACATAGA+TGG 0.400451 2_2:+44477152 None:intergenic
TACTTCTTTGAAAGAGTACT+TGG 0.401648 2_2:-44474012 Msa0252880:CDS
ATCAAGACCAATCTGCTGAT+TGG 0.402608 2_2:-44475639 Msa0252880:CDS
TGATTTCAAGTGGAGATGTT+GGG 0.404218 2_2:-44477065 Msa0252880:CDS
CCAGCAATGGCGATACTTCA+TGG 0.407514 2_2:-44478453 Msa0252880:exon
TTCTTTCAGGTAATAAATCA+TGG 0.413017 2_2:-44475796 Msa0252880:CDS
ATTCCTGTTAAGTCAATTGT+AGG 0.415919 2_2:+44475886 None:intergenic
CCCTGGGCCACTGTTAGGCC+CGG 0.416654 2_2:+44476874 None:intergenic
AGGAAGGCTCAATGATTTAT+GGG 0.428980 2_2:-44476968 Msa0252880:CDS
TTGTTTCAGCTTGATCAAAC+AGG 0.431334 2_2:-44477381 Msa0252880:intron
TTCTTTGTGTAACAACTTGA+AGG 0.437775 2_2:+44473947 None:intergenic
TTGATTTCAAGTGGAGATGT+TGG 0.441999 2_2:-44477066 Msa0252880:CDS
ACGTGGAGGCGGTGTGCTCC+CGG 0.451297 2_2:+44477206 None:intergenic
GGGTTGCAGCTGAAATTCTT+GGG 0.452145 2_2:+44474135 None:intergenic
CCCATGTGACCTTGGTCACT+AGG 0.452252 2_2:+44476673 None:intergenic
TTGCAAGGGAAGAGGTGGGC+CGG 0.453359 2_2:-44476893 Msa0252880:CDS
ACAACTTCATCTCTCAAAAC+AGG 0.453932 2_2:+44475853 None:intergenic
CTGACCATGTCAAGGTATCT+AGG 0.455547 2_2:+44477241 None:intergenic
TGAAATCAAGGCCCAATTGT+TGG 0.455604 2_2:+44477080 None:intergenic
GCCGGGCCTAACAGTGGCCC+AGG 0.464383 2_2:-44476875 Msa0252880:CDS
ACTTCATGGCAGTTGGTTCA+AGG 0.464765 2_2:-44478439 Msa0252880:intron
TAAGCCCACTTGTTTCCACT+TGG 0.467507 2_2:+44476770 None:intergenic
TGACACTAAAACCAACAATT+GGG 0.468892 2_2:-44477091 Msa0252880:CDS
TTCGGTGGCTGTGGAGTGGC+AGG 0.473551 2_2:-44476988 Msa0252880:CDS
TTCATCAGCTTTAGGAGGAT+CGG 0.473721 2_2:+44475588 None:intergenic
TGCAAGGGAAGAGGTGGGCC+GGG 0.474673 2_2:-44476892 Msa0252880:CDS
GAGGGCATACCGAAAGTGAT+TGG 0.476776 2_2:-44474083 Msa0252880:CDS
TCATCAGCTTTAGGAGGATC+GGG 0.477138 2_2:+44475589 None:intergenic
TTGGACGATAAAGTGGAATC+AGG 0.477256 2_2:-44476589 Msa0252880:CDS
AATCACTTTCGGTATGCCCT+CGG 0.478942 2_2:+44474085 None:intergenic
CAAGAGGGATTATTAGTGTA+TGG 0.478956 2_2:-44476511 Msa0252880:CDS
CTTCCCTTGCAACTTTCACC+AGG 0.479391 2_2:+44476904 None:intergenic
CACTACAAGAGCTCCATGAA+TGG 0.483845 2_2:+44474731 None:intergenic
AACATCTCCACTTGAAATCA+AGG 0.485982 2_2:+44477068 None:intergenic
CCTATGGTTAACTCTGGCTC+AGG 0.486491 2_2:+44474855 None:intergenic
TCACATGCTATTGCCGTAGT+AGG 0.488119 2_2:-44477336 Msa0252880:CDS
AACACATAATTGTATATGGT+GGG 0.491224 2_2:-44476705 Msa0252880:CDS
GGACAGAAGGTCTATGCATT+CGG 0.492484 2_2:-44477315 Msa0252880:CDS
GAATTTGATGAGTCAAAGGT+TGG 0.494931 2_2:-44476021 Msa0252880:CDS
GTTAACTCTGGCTCAGGGCA+TGG 0.496528 2_2:+44474861 None:intergenic
TTTATGGGCCTTTGATGTTG+TGG 0.497159 2_2:-44476953 Msa0252880:CDS
GTGGAATCAGGTGATCATCC+AGG 0.497286 2_2:-44476577 Msa0252880:CDS
CCCTAGTGACCAAGGTCACA+TGG 0.498673 2_2:-44476674 Msa0252880:CDS
TGAGTGCTTGGTAGTGCCTA+TGG 0.499149 2_2:+44474839 None:intergenic
TGTGTATGGTTTCGCTGGAA+TGG 0.500991 2_2:-44476839 Msa0252880:CDS
ATCACTTTCGGTATGCCCTC+GGG 0.502851 2_2:+44474086 None:intergenic
TGGGTGGAATTTCCATCTCC+TGG 0.503407 2_2:-44476922 Msa0252880:CDS
GAAAGTGATTGGACCAATCA+AGG 0.505959 2_2:-44474072 Msa0252880:CDS
ATCATCCAGGGCCACGTGGG+TGG 0.507358 2_2:-44476564 Msa0252880:CDS
TTGCAACTTTCACCAGGAGA+TGG 0.508173 2_2:+44476910 None:intergenic
GAACAATCTAATATCAATCA+TGG 0.512601 2_2:-44475943 Msa0252880:CDS
GACCAAGGTCACATGGGTGC+TGG 0.513231 2_2:-44476667 Msa0252880:CDS
AAAGCTAGCATCTGAGTGCT+TGG 0.513732 2_2:+44474827 None:intergenic
TGAATACACAAAAGAAGTAA+TGG 0.519577 2_2:-44474997 Msa0252880:CDS
AACATACACACGTCGGTCAT+CGG 0.519773 2_2:+44477011 None:intergenic
GGTCAGTAGCCGATGTATCC+GGG 0.521034 2_2:-44477224 Msa0252880:CDS
ACAAAAGAAGTAATGGAACT+TGG 0.521561 2_2:-44474990 Msa0252880:CDS
AAAGGAATTTGATGAGTCAA+AGG 0.522155 2_2:-44476025 Msa0252880:CDS
TGTCCCTCCAATCAGCAGAT+TGG 0.523116 2_2:+44475632 None:intergenic
GAGTTATTGTCAGAAGCTCT+TGG 0.524714 2_2:-44474954 Msa0252880:CDS
ATTAAGACAAACCTGCAAAC+CGG 0.524849 2_2:+44475559 None:intergenic
ACTACAAGAGCTCCATGAAT+GGG 0.524949 2_2:+44474732 None:intergenic
CCATGTGACCTTGGTCACTA+GGG 0.525844 2_2:+44476674 None:intergenic
GTGACTGTGGATTCCAGCAA+TGG 0.528397 2_2:-44478466 Msa0252880:exon
TGGCGATACTTCATGGCAGT+TGG 0.529426 2_2:-44478446 Msa0252880:CDS
AAGCCCACTTGTTTCCACTT+GGG 0.532207 2_2:+44476771 None:intergenic
TGGGTTGTGTATGGTTTCGC+TGG 0.532785 2_2:-44476844 Msa0252880:CDS
ATGGAGTGGTAGCTACGGTT+AGG 0.534804 2_2:+44477039 None:intergenic
ACGTCGGTCATCGGCAGTCA+TGG 0.536504 2_2:+44477020 None:intergenic
GACACTATCATGGACGAGGT+TGG 0.537344 2_2:-44476608 Msa0252880:CDS
GACGAGGTTGGACGATAAAG+TGG 0.538242 2_2:-44476596 Msa0252880:CDS
CACGTGTAACTTGTTATCAA+CGG 0.539910 2_2:+44477269 None:intergenic
AAGACCAATCTGCTGATTGG+AGG 0.540908 2_2:-44475636 Msa0252880:CDS
TTGGCTGCCTCGGCTAGCAC+CGG 0.541808 2_2:+44476531 None:intergenic
GAGTCAAAGGTTGGTGTCCA+AGG 0.541962 2_2:-44476012 Msa0252880:CDS
AAATTCTTCATGACAATCAG+TGG 0.543081 2_2:-44474767 Msa0252880:CDS
CTTGCCATCCACAACATCAA+AGG 0.543652 2_2:+44476945 None:intergenic
ATAATCCCTCTTGGCTGCCT+CGG 0.546368 2_2:+44476521 None:intergenic
TGGGCCTTTGATGTTGTGGA+TGG 0.546782 2_2:-44476949 Msa0252880:CDS
TGACGTGCATTTCTTCGACC+TGG 0.546867 2_2:-44476809 Msa0252880:CDS
CTCTCAAAACAGGATCATCA+TGG 0.547021 2_2:+44475863 None:intergenic
GACCAGCACCCATGTGACCT+TGG 0.549010 2_2:+44476665 None:intergenic
GGTGAAAGTTGCAAGGGAAG+AGG 0.549168 2_2:-44476901 Msa0252880:CDS
GAAGTATCTCTATATATTGG+TGG 0.551662 2_2:+44474029 None:intergenic
TCATCAAGCCTGTCGTTGCT+AGG 0.553094 2_2:+44476478 None:intergenic
GAAAGTTGCAAGGGAAGAGG+TGG 0.555227 2_2:-44476898 Msa0252880:CDS
AATTGGGCCTTGATTTCAAG+TGG 0.556457 2_2:-44477075 Msa0252880:CDS
GAAACCATCTATGTATTTGG+TGG 0.556915 2_2:-44477156 Msa0252880:CDS
GCAAGATGCTAAGGTGAGGA+AGG 0.558342 2_2:-44475719 Msa0252880:CDS
AACAAGTTGAAAACACACTA+CGG 0.558479 2_2:+44476737 None:intergenic
GCTAGCCGAGGCAGCCAAGA+GGG 0.561545 2_2:-44476526 Msa0252880:CDS
AAGTATCTCTATATATTGGT+GGG 0.564452 2_2:+44474030 None:intergenic
TTGATGTTGTGGATGGCAAG+TGG 0.565683 2_2:-44476942 Msa0252880:CDS
TGGTTTCGCTGGAATGGAAG+TGG 0.566273 2_2:-44476833 Msa0252880:CDS
GAACATTGGAGATCTTCTAC+AGG 0.566435 2_2:-44474709 Msa0252880:intron
ATCTCCTGGTGAAAGTTGCA+AGG 0.567843 2_2:-44476908 Msa0252880:CDS
CATACACTAATAATCCCTCT+TGG 0.571128 2_2:+44476512 None:intergenic
TTCCTGTTAAGTCAATTGTA+GGG 0.572686 2_2:+44475887 None:intergenic
GGAGCTCTTGTAGTGAACAT+TGG 0.576553 2_2:-44474723 Msa0252880:CDS
TGATGTTGTGGATGGCAAGT+GGG 0.578551 2_2:-44476941 Msa0252880:CDS
GTAGTGCCTATGGTTAACTC+TGG 0.578696 2_2:+44474849 None:intergenic
ATTTCACCAGCAAGATGCTA+AGG 0.580700 2_2:-44475728 Msa0252880:CDS
GTGGCTGTGGAGTGGCAGGA+AGG 0.583072 2_2:-44476984 Msa0252880:CDS
AGACCAATCTGCTGATTGGA+GGG 0.584002 2_2:-44475635 Msa0252880:CDS
GCAACTCACCTAGCAACGAC+AGG 0.588373 2_2:-44476486 Msa0252880:CDS
CCGGGCCTAACAGTGGCCCA+GGG 0.590476 2_2:-44476874 Msa0252880:CDS
TAAAGCTGATGAACTACCAC+CGG 0.591747 2_2:-44475578 Msa0252880:CDS
AGCACACCGCCTCCACGTGT+TGG 0.592914 2_2:-44477201 Msa0252880:CDS
AGGTGGGCCGGGCCTAACAG+TGG 0.595141 2_2:-44476881 Msa0252880:CDS
GAAAACACACTACGGGCCGT+TGG 0.595615 2_2:+44476745 None:intergenic
ACAAGTTGAAAACACACTAC+GGG 0.597063 2_2:+44476738 None:intergenic
AAACACATAATTGTATATGG+TGG 0.598952 2_2:-44476706 Msa0252880:CDS
ACACATAATTGTATATGGTG+GGG 0.601078 2_2:-44476704 Msa0252880:CDS
CGGTGTGCTCCCGGATACAT+CGG 0.602948 2_2:+44477215 None:intergenic
GATCAAACAGGAATCTTGCA+AGG 0.605041 2_2:-44477369 Msa0252880:CDS
GAGTGGTAGCTACGGTTAGG+AGG 0.607165 2_2:+44477042 None:intergenic
CTATGGTTAACTCTGGCTCA+GGG 0.607343 2_2:+44474856 None:intergenic
ACTAACTTTGAGCAAGAGCA+AGG 0.608068 2_2:+44476446 None:intergenic
GGTAGTTCATCAGCTTTAGG+AGG 0.608431 2_2:+44475583 None:intergenic
AACAAGTGGGCTTAAACCAA+CGG 0.609427 2_2:-44476761 Msa0252880:CDS
TAGACACGGAGACACTATCA+TGG 0.609879 2_2:-44476618 Msa0252880:CDS
GTGACACCAACACGTGGAGG+CGG 0.609943 2_2:+44477195 None:intergenic
GCATTTGCCGGTGCTAGCCG+AGG 0.611791 2_2:-44476538 Msa0252880:CDS
GAAATAGACCCTAGTGACCA+AGG 0.612642 2_2:-44476682 Msa0252880:CDS
CGGAGACACTATCATGGACG+AGG 0.615534 2_2:-44476612 Msa0252880:CDS
GGTGTCACGATGGCTGCAGT+TGG 0.615550 2_2:-44477180 Msa0252880:CDS
TGGAATCAGGTGATCATCCA+GGG 0.616772 2_2:-44476576 Msa0252880:CDS
ATAGACCTTCTGTCCTACTA+CGG 0.620524 2_2:+44477323 None:intergenic
TTGTTATCAACGGGGACACG+TGG 0.620860 2_2:+44477279 None:intergenic
TCTCCTGGTGAAAGTTGCAA+GGG 0.623404 2_2:-44476907 Msa0252880:CDS
CCTGAGCCAGAGTTAACCAT+AGG 0.624567 2_2:-44474855 Msa0252880:CDS
TGTTGTGGATGGCAAGTGGG+TGG 0.625429 2_2:-44476938 Msa0252880:CDS
TGGGCCCAAGTGGAAACAAG+TGG 0.628859 2_2:-44476775 Msa0252880:CDS
GTGATCATCCAGGGCCACGT+GGG 0.629702 2_2:-44476567 Msa0252880:CDS
AACTCTGGCTCAGGGCATGG+TGG 0.629830 2_2:+44474864 None:intergenic
TCTTTGTGTAACAACTTGAA+GGG 0.632223 2_2:+44473948 None:intergenic
GCCATCGTGACACCAACACG+TGG 0.638626 2_2:+44477189 None:intergenic
CAGTCATGGAGTGGTAGCTA+CGG 0.640561 2_2:+44477034 None:intergenic
GAAAATGATCATTCTCCCGA+GGG 0.640773 2_2:-44474101 Msa0252880:CDS
GGTGATCATCCAGGGCCACG+TGG 0.641702 2_2:-44476568 Msa0252880:CDS
TATTGCCGTAGTAGGACAGA+AGG 0.645786 2_2:-44477328 Msa0252880:CDS
ATCGGCTACTGACCATGTCA+AGG 0.646523 2_2:+44477233 None:intergenic
CCTAGTGACCAAGGTCACAT+GGG 0.649054 2_2:-44476673 Msa0252880:CDS
GGTCATCGGCAGTCATGGAG+TGG 0.651183 2_2:+44477025 None:intergenic
AGAAAATGATCATTCTCCCG+AGG 0.651851 2_2:-44474102 Msa0252880:CDS
TGTTCACAATAGAACATGCG+TGG 0.652888 2_2:+44475961 None:intergenic
GAGGGATTATTAGTGTATGG+TGG 0.654652 2_2:-44476508 Msa0252880:CDS
TCCACGTGTTGGTGTCACGA+TGG 0.660694 2_2:-44477190 Msa0252880:CDS
TGCTAGCCGAGGCAGCCAAG+AGG 0.662151 2_2:-44476527 Msa0252880:CDS
ACAAGAGCTCCATGAATGGG+AGG 0.664822 2_2:+44474735 None:intergenic
ACCAGCAAGATGCTAAGGTG+AGG 0.666223 2_2:-44475723 Msa0252880:CDS
GGGCCCAAGTGGAAACAAGT+GGG 0.666793 2_2:-44476774 Msa0252880:CDS
TTTCACCTTAAAGAAATGGG+TGG 0.669012 2_2:-44474921 Msa0252880:CDS
CAAAATGCAAGTGAGAAATG+GGG 0.669107 2_2:-44475820 Msa0252880:CDS
AAAGTTGCAAGGGAAGAGGT+GGG 0.669531 2_2:-44476897 Msa0252880:CDS
TGTTGTATACGATAATGCAT+TGG 0.673791 2_2:+44478525 None:intergenic
ATCGTGACACCAACACGTGG+AGG 0.680472 2_2:+44477192 None:intergenic
CAGAAGGTCTATGCATTCGG+CGG 0.680867 2_2:-44477312 Msa0252880:CDS
GCAAATGCGCACCACCCACG+TGG 0.684596 2_2:+44476553 None:intergenic
TGAGCTTTATGCATTAGACA+CGG 0.693180 2_2:-44476632 Msa0252880:CDS
AAGACAAACCTGCAAACCGG+TGG 0.695495 2_2:+44475562 None:intergenic
CGTGTAACTTGTTATCAACG+GGG 0.719522 2_2:+44477271 None:intergenic
ACGACCTAGATACCTTGACA+TGG 0.737782 2_2:-44477245 Msa0252880:CDS
CACCGAAAACATACACACGT+CGG 0.744843 2_2:+44477004 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAGATTTTTTAAGTAATT+AGG - chr2_2:44474841-44474860 Msa0252880:CDS 10.0%
!! TTAATTTACCTAAATATCTA+AGG + chr2_2:44474819-44474838 None:intergenic 15.0%
!!! ATTTCATTTTAACAACATTA+GGG + chr2_2:44475076-44475095 None:intergenic 15.0%
!!! TATTTCATTTTAACAACATT+AGG + chr2_2:44475077-44475096 None:intergenic 15.0%
!! AATAACATATATTTAAGCTA+AGG + chr2_2:44476361-44476380 None:intergenic 15.0%
!! TAAAATTAAAATTATGTAGC+AGG - chr2_2:44476416-44476435 Msa0252880:intron 15.0%
!! ATCAATGACGATTATATATT+AGG - chr2_2:44473949-44473968 Msa0252880:CDS 20.0%
!! ATGTTTGTGAAATGAAAAAT+TGG - chr2_2:44474209-44474228 Msa0252880:intron 20.0%
!! TGTTTGTGAAATGAAAAATT+GGG - chr2_2:44474210-44474229 Msa0252880:intron 20.0%
!!! ATAGCATAAATATTGATTTC+AGG - chr2_2:44474304-44474323 Msa0252880:intron 20.0%
!!! TTTGGATCAACAATATATTT+TGG - chr2_2:44474405-44474424 Msa0252880:intron 20.0%
!!! ACATTTTCATAAGTTGTTTT+CGG + chr2_2:44474537-44474556 None:intergenic 20.0%
!! ATATTTCTCCTTAGATATTT+AGG - chr2_2:44474808-44474827 Msa0252880:CDS 20.0%
!!! GAACTATAACAATTTTTTCA+TGG + chr2_2:44474870-44474889 None:intergenic 20.0%
!!! TTTCATTTTAACAACATTAG+GGG + chr2_2:44475075-44475094 None:intergenic 20.0%
!!! TGTTTTCAACTTGTTTAATT+GGG - chr2_2:44475768-44475787 Msa0252880:CDS 20.0%
!!! GGAAAGATAAACAAATTTTT+TGG + chr2_2:44476825-44476844 None:intergenic 20.0%
!! CTTGAATAAAACTATGAAAT+TGG + chr2_2:44476984-44477003 None:intergenic 20.0%
!!! CAATTTCATAGTTTTATTCA+AGG - chr2_2:44476982-44477001 Msa0252880:CDS 20.0%
!!! TGTTTTTTTCATTTACATGA+GGG + chr2_2:44477166-44477185 None:intergenic 20.0%
!!! TTGTTTTTTTCATTTACATG+AGG + chr2_2:44477167-44477186 None:intergenic 20.0%
!! ATTATAAGGAACTAAAAAGT+TGG + chr2_2:44477402-44477421 None:intergenic 20.0%
!! AAATAAGAGTTAATCAACTT+AGG + chr2_2:44478160-44478179 None:intergenic 20.0%
!!! ATCATTTTCTGTTCTAAAAA+GGG + chr2_2:44478385-44478404 None:intergenic 20.0%
!!! AAAGAAGTATCTCTATATAT+TGG + chr2_2:44478474-44478493 None:intergenic 20.0%
!!! TACAGTTTTTGTGTTGTTAA+AGG - chr2_2:44474182-44474201 Msa0252880:CDS 25.0%
! GTTTGTGAAATGAAAAATTG+GGG - chr2_2:44474211-44474230 Msa0252880:intron 25.0%
! TTTGTGAAATGAAAAATTGG+GGG - chr2_2:44474212-44474231 Msa0252880:intron 25.0%
!! GTGTTTTTCTCTCTAAATTT+AGG - chr2_2:44474377-44474396 Msa0252880:intron 25.0%
! ATATATTGTTGATCCAAACA+TGG + chr2_2:44474403-44474422 None:intergenic 25.0%
! TAACTTATATGGAAACAGTT+TGG + chr2_2:44474470-44474489 None:intergenic 25.0%
! ACTGTTTCCATATAAGTTAT+AGG - chr2_2:44474471-44474490 Msa0252880:intron 25.0%
! AAAGCAACCTATAACTTATA+TGG + chr2_2:44474481-44474500 None:intergenic 25.0%
! AATTGTTATAGTTCATGTAC+AGG - chr2_2:44474876-44474895 Msa0252880:CDS 25.0%
!!! GTGTTTTCAACTTGTTTAAT+TGG - chr2_2:44475767-44475786 Msa0252880:CDS 25.0%
! AAACACATAATTGTATATGG+TGG - chr2_2:44475791-44475810 Msa0252880:CDS 25.0%
! AACACATAATTGTATATGGT+GGG - chr2_2:44475792-44475811 Msa0252880:CDS 25.0%
! AACATATATTTAAGCTAAGG+CGG + chr2_2:44476358-44476377 None:intergenic 25.0%
!! CTTGTTATGAAATACAAGTA+CGG + chr2_2:44476393-44476412 None:intergenic 25.0%
! GAACAATCTAATATCAATCA+TGG - chr2_2:44476554-44476573 Msa0252880:CDS 25.0%
!! TTCTTTCAGGTAATAAATCA+TGG - chr2_2:44476701-44476720 Msa0252880:CDS 25.0%
! GTCTTGATAAAGAGTAAAAT+TGG + chr2_2:44476846-44476865 None:intergenic 25.0%
! GAATAAAACTATGAAATTGG+TGG + chr2_2:44476981-44477000 None:intergenic 25.0%
! GAAGATGATCTCTAATTATA+AGG + chr2_2:44477416-44477435 None:intergenic 25.0%
! TGAATACACAAAAGAAGTAA+TGG - chr2_2:44477500-44477519 Msa0252880:intron 25.0%
! TCTTGCATATAAATGAAATG+AGG - chr2_2:44478085-44478104 Msa0252880:intron 25.0%
!!! AGAGTTTTAGCAAAAAGTAT+AGG - chr2_2:44478339-44478358 Msa0252880:intron 25.0%
!!! GATCATTTTCTGTTCTAAAA+AGG + chr2_2:44478386-44478405 None:intergenic 25.0%
! AAGTATCTCTATATATTGGT+GGG + chr2_2:44478470-44478489 None:intergenic 25.0%
TGTTGTATACGATAATGCAT+TGG + chr2_2:44473975-44473994 None:intergenic 30.0%
TTGTGAAATGAAAAATTGGG+GGG - chr2_2:44474213-44474232 Msa0252880:intron 30.0%
TATGCTATTGAAAACTAGAG+TGG + chr2_2:44474292-44474311 None:intergenic 30.0%
TGTTAGAGGAAAATTGAAGT+TGG + chr2_2:44474343-44474362 None:intergenic 30.0%
TCTGTTAAGTAAGATGTTAG+AGG + chr2_2:44474357-44474376 None:intergenic 30.0%
!! GTTGCTTTCATACGTTATTT+TGG - chr2_2:44474493-44474512 Msa0252880:intron 30.0%
! GTGACCTTTTACTTAAGTTT+AGG - chr2_2:44474681-44474700 Msa0252880:intron 30.0%
CCTACCTAAACTTAAGTAAA+AGG + chr2_2:44474688-44474707 None:intergenic 30.0%
! CCTTTTACTTAAGTTTAGGT+AGG - chr2_2:44474685-44474704 Msa0252880:intron 30.0%
CAGAAACTATTCAAGAATAC+TGG + chr2_2:44474971-44474990 None:intergenic 30.0%
AATGCTATCTAGTAGAATAC+TGG + chr2_2:44475031-44475050 None:intergenic 30.0%
TTGACACTAAAACCAACAAT+TGG - chr2_2:44475405-44475424 Msa0252880:intron 30.0%
TGACACTAAAACCAACAATT+GGG - chr2_2:44475406-44475425 Msa0252880:intron 30.0%
! AACAAGTTGAAAACACACTA+CGG + chr2_2:44475763-44475782 None:intergenic 30.0%
GGGAAACACATAATTGTATA+TGG - chr2_2:44475788-44475807 Msa0252880:CDS 30.0%
ACACATAATTGTATATGGTG+GGG - chr2_2:44475793-44475812 Msa0252880:CDS 30.0%
TGACAGAAAAAGTGAACTAA+AGG - chr2_2:44476454-44476473 Msa0252880:CDS 30.0%
AAAGGAATTTGATGAGTCAA+AGG - chr2_2:44476472-44476491 Msa0252880:CDS 30.0%
TTCCTGTTAAGTCAATTGTA+GGG + chr2_2:44476613-44476632 None:intergenic 30.0%
ATTCCTGTTAAGTCAATTGT+AGG + chr2_2:44476614-44476633 None:intergenic 30.0%
TTCAAAATGCAAGTGAGAAA+TGG - chr2_2:44476675-44476694 Msa0252880:CDS 30.0%
TCAAAATGCAAGTGAGAAAT+GGG - chr2_2:44476676-44476695 Msa0252880:CDS 30.0%
! TTTTGGATGAGATGATCAAA+GGG - chr2_2:44476738-44476757 Msa0252880:CDS 30.0%
!!! AAATTTTTTGGTGACATCAC+GGG + chr2_2:44476813-44476832 None:intergenic 30.0%
!!! CAAATTTTTTGGTGACATCA+CGG + chr2_2:44476814-44476833 None:intergenic 30.0%
AGTTTGACTAGTGATTATTC+CGG - chr2_2:44477046-44477065 Msa0252880:CDS 30.0%
TCATTTGTAAGTTTCAGTGA+AGG + chr2_2:44477108-44477127 None:intergenic 30.0%
ACAAGTAATCAAAGCCAAAA+AGG - chr2_2:44477217-44477236 Msa0252880:CDS 30.0%
! ACAAAAGAAGTAATGGAACT+TGG - chr2_2:44477507-44477526 Msa0252880:intron 30.0%
! GTACTTTTGCAAGATCATAT+TGG - chr2_2:44477699-44477718 Msa0252880:intron 30.0%
GATTGTCATGAAGAATTTGT+AGG + chr2_2:44477728-44477747 None:intergenic 30.0%
AAATTCTTCATGACAATCAG+TGG - chr2_2:44477730-44477749 Msa0252880:intron 30.0%
CACTGAAAACTATAGTAACA+TGG - chr2_2:44477887-44477906 Msa0252880:intron 30.0%
ATATTCATGCAACATGTTGT+TGG - chr2_2:44478000-44478019 Msa0252880:intron 30.0%
TCAGATAAAAGTTCCTTGAT+TGG + chr2_2:44478441-44478460 None:intergenic 30.0%
! GAAGTATCTCTATATATTGG+TGG + chr2_2:44478471-44478490 None:intergenic 30.0%
!! TACTTCTTTGAAAGAGTACT+TGG - chr2_2:44478485-44478504 Msa0252880:five_prime_UTR 30.0%
!! TTGGCATATCGTTTTTCAAA+CGG - chr2_2:44478504-44478523 Msa0252880:five_prime_UTR 30.0%
TCTTTGTGTAACAACTTGAA+GGG + chr2_2:44478552-44478571 None:intergenic 30.0%
TTCTTTGTGTAACAACTTGA+AGG + chr2_2:44478553-44478572 None:intergenic 30.0%
CTCTAAATTTAGGCCATGTT+TGG - chr2_2:44474387-44474406 Msa0252880:intron 35.0%
!!! ACGTTATTTTGGAGAGCTTA+TGG - chr2_2:44474504-44474523 Msa0252880:intron 35.0%
TAAGTGCTAGTAAGACTGTT+TGG + chr2_2:44474584-44474603 None:intergenic 35.0%
GGAACAATTAAGGATCTGTT+TGG + chr2_2:44474636-44474655 None:intergenic 35.0%
TACATCTGCAGGAACAATTA+AGG + chr2_2:44474646-44474665 None:intergenic 35.0%
TAATTGTTCCTGCAGATGTA+AGG - chr2_2:44474646-44474665 Msa0252880:intron 35.0%
CATGTACAGGCTAATAGTTA+AGG - chr2_2:44474889-44474908 Msa0252880:CDS 35.0%
TTGTTTCAGCTTGATCAAAC+AGG - chr2_2:44475116-44475135 Msa0252880:intron 35.0%
!! ACGTGTAACTTGTTATCAAC+GGG + chr2_2:44475230-44475249 None:intergenic 35.0%
!! CACGTGTAACTTGTTATCAA+CGG + chr2_2:44475231-44475250 None:intergenic 35.0%
GGAGAAACCATCTATGTATT+TGG - chr2_2:44475338-44475357 Msa0252880:intron 35.0%
GAAACCATCTATGTATTTGG+TGG - chr2_2:44475341-44475360 Msa0252880:intron 35.0%
TCTTCCACCAAATACATAGA+TGG + chr2_2:44475348-44475367 None:intergenic 35.0%
AACATCTCCACTTGAAATCA+AGG + chr2_2:44475432-44475451 None:intergenic 35.0%
! TTGATTTCAAGTGGAGATGT+TGG - chr2_2:44475431-44475450 Msa0252880:intron 35.0%
! TGATTTCAAGTGGAGATGTT+GGG - chr2_2:44475432-44475451 Msa0252880:intron 35.0%
AGGAAGGCTCAATGATTTAT+GGG - chr2_2:44475529-44475548 Msa0252880:intron 35.0%
! GGAAAAATATGGGTTGTGTA+TGG - chr2_2:44475644-44475663 Msa0252880:CDS 35.0%
! ACAAGTTGAAAACACACTAC+GGG + chr2_2:44475762-44475781 None:intergenic 35.0%
! TGAGCTTTATGCATTAGACA+CGG - chr2_2:44475865-44475884 Msa0252880:CDS 35.0%
CATACACTAATAATCCCTCT+TGG + chr2_2:44475988-44476007 None:intergenic 35.0%
CAAGAGGGATTATTAGTGTA+TGG - chr2_2:44475986-44476005 Msa0252880:CDS 35.0%
GCATATGTGTGATCAATTCT+AGG - chr2_2:44476101-44476120 Msa0252880:intron 35.0%
ACAGTATGTCATGTGAACTT+AGG - chr2_2:44476144-44476163 Msa0252880:intron 35.0%
AAAGCGTGTTTAATACAACC+TGG - chr2_2:44476294-44476313 Msa0252880:intron 35.0%
! CAGGTTCTATTTGAAATACC+AGG + chr2_2:44476315-44476334 None:intergenic 35.0%
CTGGTATTTCAAATAGAACC+TGG - chr2_2:44476313-44476332 Msa0252880:intron 35.0%
CTCATTGTCAACTAATTTCC+AGG + chr2_2:44476334-44476353 None:intergenic 35.0%
CTGGAAATTAGTTGACAATG+AGG - chr2_2:44476332-44476351 Msa0252880:intron 35.0%
GAATTTGATGAGTCAAAGGT+TGG - chr2_2:44476476-44476495 Msa0252880:CDS 35.0%
ACAACTTCATCTCTCAAAAC+AGG + chr2_2:44476647-44476666 None:intergenic 35.0%
CAAAATGCAAGTGAGAAATG+GGG - chr2_2:44476677-44476696 Msa0252880:CDS 35.0%
! TGGAATTCCAGTTCATGTTT+TGG - chr2_2:44476721-44476740 Msa0252880:CDS 35.0%
ATCTCATCCAAAACATGAAC+TGG + chr2_2:44476731-44476750 None:intergenic 35.0%
!! GTTTTGGATGAGATGATCAA+AGG - chr2_2:44476737-44476756 Msa0252880:CDS 35.0%
ATTAAGACAAACCTGCAAAC+CGG + chr2_2:44476941-44476960 None:intergenic 35.0%
CTGTTGAACTCTAGATTACA+TGG + chr2_2:44477014-44477033 None:intergenic 35.0%
! CATGTAATCTAGAGTTCAAC+AGG - chr2_2:44477012-44477031 Msa0252880:CDS 35.0%
! TAATCTAGAGTTCAACAGGA+GGG - chr2_2:44477016-44477035 Msa0252880:CDS 35.0%
TTCCGGTAAAAGTTCAAACA+CGG - chr2_2:44477063-44477082 Msa0252880:CDS 35.0%
AAAATCCGAGAAAAAATGCG+TGG - chr2_2:44477355-44477374 Msa0252880:CDS 35.0%
GAATTCAATGTCCTTGATGA+TGG - chr2_2:44477444-44477463 Msa0252880:intron 35.0%
GTTATCAATAGCCATCATCA+AGG + chr2_2:44477458-44477477 None:intergenic 35.0%
!! CTTTAAGGTGAAAGCGATTA+AGG + chr2_2:44477569-44477588 None:intergenic 35.0%
TCGCTTTCACCTTAAAGAAA+TGG - chr2_2:44477572-44477591 Msa0252880:intron 35.0%
CGCTTTCACCTTAAAGAAAT+GGG - chr2_2:44477573-44477592 Msa0252880:intron 35.0%
TTTCACCTTAAAGAAATGGG+TGG - chr2_2:44477576-44477595 Msa0252880:intron 35.0%
! CTTTTGCAAGATCATATTGG+TGG - chr2_2:44477702-44477721 Msa0252880:intron 35.0%
! ATTGATTTACCTCCCATTCA+TGG - chr2_2:44477753-44477772 Msa0252880:intron 35.0%
TTAAGCAAGAAGTCTGACTT+AGG - chr2_2:44478049-44478068 Msa0252880:intron 35.0%
TTTCCATCTTAGAGTTGACA+AGG - chr2_2:44478125-44478144 Msa0252880:intron 35.0%
AGTTAATCAACTTAGGACCA+TGG + chr2_2:44478153-44478172 None:intergenic 35.0%
! TTGATTGGTCCAATCACTTT+CGG + chr2_2:44478426-44478445 None:intergenic 35.0%
!! TATCGTTTTTCAAACGGTCT+TGG - chr2_2:44478510-44478529 Msa0252880:five_prime_UTR 35.0%
GATGAACACTGAAGCGAAAT+TGG + chr2_2:44474006-44474025 None:intergenic 40.0%
! TGTTCATCTTTTCGTGACTG+TGG - chr2_2:44474018-44474037 Msa0252880:CDS 40.0%
!! GAGTGAAGAAGTATCTCGTA+CGG + chr2_2:44474764-44474783 None:intergenic 40.0%
GATCAAACAGGAATCTTGCA+AGG - chr2_2:44475128-44475147 Msa0252880:intron 40.0%
ATAGACCTTCTGTCCTACTA+CGG + chr2_2:44475177-44475196 None:intergenic 40.0%
!! CGTGTAACTTGTTATCAACG+GGG + chr2_2:44475229-44475248 None:intergenic 40.0%
TGAAATCAAGGCCCAATTGT+TGG + chr2_2:44475420-44475439 None:intergenic 40.0%
AATTGGGCCTTGATTTCAAG+TGG - chr2_2:44475422-44475441 Msa0252880:intron 40.0%
CAGGAAGGCTCAATGATTTA+TGG - chr2_2:44475528-44475547 Msa0252880:intron 40.0%
TTTATGGGCCTTTGATGTTG+TGG - chr2_2:44475544-44475563 Msa0252880:intron 40.0%
! CACAACCCATATTTTTCCCT+GGG + chr2_2:44475642-44475661 None:intergenic 40.0%
! ACACAACCCATATTTTTCCC+TGG + chr2_2:44475643-44475662 None:intergenic 40.0%
! AACAAGTGGGCTTAAACCAA+CGG - chr2_2:44475736-44475755 Msa0252880:CDS 40.0%
TTGGACGATAAAGTGGAATC+AGG - chr2_2:44475908-44475927 Msa0252880:CDS 40.0%
GAGGGATTATTAGTGTATGG+TGG - chr2_2:44475989-44476008 Msa0252880:CDS 40.0%
ACTAACTTTGAGCAAGAGCA+AGG + chr2_2:44476054-44476073 None:intergenic 40.0%
TGCTCTTGCTCAAAGTTAGT+TGG - chr2_2:44476054-44476073 Msa0252880:CDS 40.0%
GTCCAAGGACTCATAGAAAA+TGG - chr2_2:44476500-44476519 Msa0252880:CDS 40.0%
! CACCATTTTCTATGAGTCCT+TGG + chr2_2:44476505-44476524 None:intergenic 40.0%
TGTTCACAATAGAACATGCG+TGG + chr2_2:44476539-44476558 None:intergenic 40.0%
! GTCCCTACAATTGACTTAAC+AGG - chr2_2:44476608-44476627 Msa0252880:CDS 40.0%
CTCTCAAAACAGGATCATCA+TGG + chr2_2:44476637-44476656 None:intergenic 40.0%
TGAGAAATGGGGATTCTTTC+AGG - chr2_2:44476688-44476707 Msa0252880:CDS 40.0%
ATTTCACCAGCAAGATGCTA+AGG - chr2_2:44476769-44476788 Msa0252880:CDS 40.0%
ATCAAGACCAATCTGCTGAT+TGG - chr2_2:44476858-44476877 Msa0252880:CDS 40.0%
! GGACACACTTGCATTTTTCT+GGG - chr2_2:44476883-44476902 Msa0252880:CDS 40.0%
!! TTCATCAGCTTTAGGAGGAT+CGG + chr2_2:44476912-44476931 None:intergenic 40.0%
TAAAGCTGATGAACTACCAC+CGG - chr2_2:44476919-44476938 Msa0252880:CDS 40.0%
! GTAATCTAGAGTTCAACAGG+AGG - chr2_2:44477015-44477034 Msa0252880:CDS 40.0%
TCCGGTAAAAGTTCAAACAC+GGG - chr2_2:44477064-44477083 Msa0252880:CDS 40.0%
! ACCCGTGTTTGAACTTTTAC+CGG + chr2_2:44477068-44477087 None:intergenic 40.0%
ATTTACATGAGGGACCAACT+AGG + chr2_2:44477156-44477175 None:intergenic 40.0%
! TGTGTATGAGTTTTGCTGCT+TGG - chr2_2:44477259-44477278 Msa0252880:CDS 40.0%
!!! GTACACCACGCATTTTTTCT+CGG + chr2_2:44477363-44477382 None:intergenic 40.0%
GAGTTATTGTCAGAAGCTCT+TGG - chr2_2:44477543-44477562 Msa0252880:intron 40.0%
ACTACAAGAGCTCCATGAAT+GGG + chr2_2:44477768-44477787 None:intergenic 40.0%
GAACATTGGAGATCTTCTAC+AGG - chr2_2:44477788-44477807 Msa0252880:intron 40.0%
AGAAAATGATCATTCTCCCG+AGG - chr2_2:44478395-44478414 Msa0252880:intron 40.0%
GAAAATGATCATTCTCCCGA+GGG - chr2_2:44478396-44478415 Msa0252880:intron 40.0%
GAAAGTGATTGGACCAATCA+AGG - chr2_2:44478425-44478444 Msa0252880:intron 40.0%
! ACTTCATGGCAGTTGGTTCA+AGG - chr2_2:44474058-44474077 Msa0252880:CDS 45.0%
TTCCTGCAGATGTAAGGATG+CGG - chr2_2:44474652-44474671 Msa0252880:intron 45.0%
TCACATGCTATTGCCGTAGT+AGG - chr2_2:44475161-44475180 Msa0252880:intron 45.0%
TATTGCCGTAGTAGGACAGA+AGG - chr2_2:44475169-44475188 Msa0252880:intron 45.0%
GGACAGAAGGTCTATGCATT+CGG - chr2_2:44475182-44475201 Msa0252880:intron 45.0%
ACGACCTAGATACCTTGACA+TGG - chr2_2:44475252-44475271 Msa0252880:intron 45.0%
! CTGACCATGTCAAGGTATCT+AGG + chr2_2:44475259-44475278 None:intergenic 45.0%
AACATACACACGTCGGTCAT+CGG + chr2_2:44475489-44475508 None:intergenic 45.0%
! GACCGACGTGTGTATGTTTT+CGG - chr2_2:44475491-44475510 Msa0252880:intron 45.0%
CACCGAAAACATACACACGT+CGG + chr2_2:44475496-44475515 None:intergenic 45.0%
CTTGCCATCCACAACATCAA+AGG + chr2_2:44475555-44475574 None:intergenic 45.0%
TTGATGTTGTGGATGGCAAG+TGG - chr2_2:44475555-44475574 Msa0252880:intron 45.0%
TGATGTTGTGGATGGCAAGT+GGG - chr2_2:44475556-44475575 Msa0252880:intron 45.0%
TTGCAACTTTCACCAGGAGA+TGG + chr2_2:44475590-44475609 None:intergenic 45.0%
ATCTCCTGGTGAAAGTTGCA+AGG - chr2_2:44475589-44475608 Msa0252880:CDS 45.0%
TCTCCTGGTGAAAGTTGCAA+GGG - chr2_2:44475590-44475609 Msa0252880:CDS 45.0%
AAAGTTGCAAGGGAAGAGGT+GGG - chr2_2:44475600-44475619 Msa0252880:CDS 45.0%
AGTGGCCCAGGGAAAAATAT+GGG - chr2_2:44475634-44475653 Msa0252880:CDS 45.0%
TGTGTATGGTTTCGCTGGAA+TGG - chr2_2:44475658-44475677 Msa0252880:CDS 45.0%
!!! CACTTGGGCCCATGTTTTTT+GGG + chr2_2:44475714-44475733 None:intergenic 45.0%
AAGCCCACTTGTTTCCACTT+GGG + chr2_2:44475729-44475748 None:intergenic 45.0%
TAAGCCCACTTGTTTCCACT+TGG + chr2_2:44475730-44475749 None:intergenic 45.0%
GAAATAGACCCTAGTGACCA+AGG - chr2_2:44475815-44475834 Msa0252880:CDS 45.0%
!!! ATGGGTGCTGGTCAATTTTC+AGG - chr2_2:44475842-44475861 Msa0252880:CDS 45.0%
TAGACACGGAGACACTATCA+TGG - chr2_2:44475879-44475898 Msa0252880:CDS 45.0%
TGGAATCAGGTGATCATCCA+GGG - chr2_2:44475921-44475940 Msa0252880:CDS 45.0%
! AAGACCAATCTGCTGATTGG+AGG - chr2_2:44476861-44476880 Msa0252880:CDS 45.0%
! AGACCAATCTGCTGATTGGA+GGG - chr2_2:44476862-44476881 Msa0252880:CDS 45.0%
! GGGACACACTTGCATTTTTC+TGG - chr2_2:44476882-44476901 Msa0252880:CDS 45.0%
!! TCATCAGCTTTAGGAGGATC+GGG + chr2_2:44476911-44476930 None:intergenic 45.0%
!! GGTAGTTCATCAGCTTTAGG+AGG + chr2_2:44476917-44476936 None:intergenic 45.0%
GGTGGTAGTTCATCAGCTTT+AGG + chr2_2:44476920-44476939 None:intergenic 45.0%
CACTCTCAAGTCATCCTAGT+TGG - chr2_2:44477139-44477158 Msa0252880:CDS 45.0%
ACACACTGAGTGCACAGAAA+GGG + chr2_2:44477244-44477263 None:intergenic 45.0%
TACACACTGAGTGCACAGAA+AGG + chr2_2:44477245-44477264 None:intergenic 45.0%
CAGCACCACCCATTTCTTTA+AGG + chr2_2:44477584-44477603 None:intergenic 45.0%
! CTATGGTTAACTCTGGCTCA+GGG + chr2_2:44477644-44477663 None:intergenic 45.0%
GTAGTGCCTATGGTTAACTC+TGG + chr2_2:44477651-44477670 None:intergenic 45.0%
AAAGCTAGCATCTGAGTGCT+TGG + chr2_2:44477673-44477692 None:intergenic 45.0%
CACTACAAGAGCTCCATGAA+TGG + chr2_2:44477769-44477788 None:intergenic 45.0%
GGAGCTCTTGTAGTGAACAT+TGG - chr2_2:44477774-44477793 Msa0252880:intron 45.0%
!! CAACATGTTGTTGGTTCGAG+TGG - chr2_2:44478009-44478028 Msa0252880:intron 45.0%
! GCTCCTTGTCAACTCTAAGA+TGG + chr2_2:44478131-44478150 None:intergenic 45.0%
TTAGAGTTGACAAGGAGCCA+TGG - chr2_2:44478133-44478152 Msa0252880:intron 45.0%
GGGTTGCAGCTGAAATTCTT+GGG + chr2_2:44478365-44478384 None:intergenic 45.0%
AGGGTTGCAGCTGAAATTCT+TGG + chr2_2:44478366-44478385 None:intergenic 45.0%
AATCACTTTCGGTATGCCCT+CGG + chr2_2:44478415-44478434 None:intergenic 45.0%
GTGACTGTGGATTCCAGCAA+TGG - chr2_2:44474031-44474050 Msa0252880:CDS 50.0%
!! CCATGAAGTATCGCCATTGC+TGG + chr2_2:44474047-44474066 None:intergenic 50.0%
CCAGCAATGGCGATACTTCA+TGG - chr2_2:44474044-44474063 Msa0252880:CDS 50.0%
TGGCGATACTTCATGGCAGT+TGG - chr2_2:44474051-44474070 Msa0252880:CDS 50.0%
TCGTACGGTCTACAGACTCA+CGG + chr2_2:44474749-44474768 None:intergenic 50.0%
CAGAAGGTCTATGCATTCGG+CGG - chr2_2:44475185-44475204 Msa0252880:intron 50.0%
TTGTTATCAACGGGGACACG+TGG + chr2_2:44475221-44475240 None:intergenic 50.0%
ATCGGCTACTGACCATGTCA+AGG + chr2_2:44475267-44475286 None:intergenic 50.0%
TGGTCAGTAGCCGATGTATC+CGG - chr2_2:44475272-44475291 Msa0252880:intron 50.0%
ATGGAGTGGTAGCTACGGTT+AGG + chr2_2:44475461-44475480 None:intergenic 50.0%
CAGTCATGGAGTGGTAGCTA+CGG + chr2_2:44475466-44475485 None:intergenic 50.0%
! CGACGTGTGTATGTTTTCGG+TGG - chr2_2:44475494-44475513 Msa0252880:intron 50.0%
! GTGTATGTTTTCGGTGGCTG+TGG - chr2_2:44475500-44475519 Msa0252880:intron 50.0%
TGGGCCTTTGATGTTGTGGA+TGG - chr2_2:44475548-44475567 Msa0252880:intron 50.0%
TGGGTGGAATTTCCATCTCC+TGG - chr2_2:44475575-44475594 Msa0252880:CDS 50.0%
CTTCCCTTGCAACTTTCACC+AGG + chr2_2:44475596-44475615 None:intergenic 50.0%
GGTGAAAGTTGCAAGGGAAG+AGG - chr2_2:44475596-44475615 Msa0252880:CDS 50.0%
GAAAGTTGCAAGGGAAGAGG+TGG - chr2_2:44475599-44475618 Msa0252880:CDS 50.0%
! TTTTTCCCTGGGCCACTGTT+AGG + chr2_2:44475631-44475650 None:intergenic 50.0%
CAGTGGCCCAGGGAAAAATA+TGG - chr2_2:44475633-44475652 Msa0252880:CDS 50.0%
TGGGTTGTGTATGGTTTCGC+TGG - chr2_2:44475653-44475672 Msa0252880:CDS 50.0%
TGGTTTCGCTGGAATGGAAG+TGG - chr2_2:44475664-44475683 Msa0252880:CDS 50.0%
TGACGTGCATTTCTTCGACC+TGG - chr2_2:44475688-44475707 Msa0252880:CDS 50.0%
TCGACCTGGCCCAAAAAACA+TGG - chr2_2:44475702-44475721 Msa0252880:CDS 50.0%
CGACCTGGCCCAAAAAACAT+GGG - chr2_2:44475703-44475722 Msa0252880:CDS 50.0%
!!! CCACTTGGGCCCATGTTTTT+TGG + chr2_2:44475715-44475734 None:intergenic 50.0%
CCAAAAAACATGGGCCCAAG+TGG - chr2_2:44475712-44475731 Msa0252880:CDS 50.0%
CCATGTGACCTTGGTCACTA+GGG + chr2_2:44475826-44475845 None:intergenic 50.0%
CCTAGTGACCAAGGTCACAT+GGG - chr2_2:44475824-44475843 Msa0252880:CDS 50.0%
GACACTATCATGGACGAGGT+TGG - chr2_2:44475889-44475908 Msa0252880:CDS 50.0%
GACGAGGTTGGACGATAAAG+TGG - chr2_2:44475901-44475920 Msa0252880:CDS 50.0%
GTGGAATCAGGTGATCATCC+AGG - chr2_2:44475920-44475939 Msa0252880:CDS 50.0%
ATAATCCCTCTTGGCTGCCT+CGG + chr2_2:44475979-44475998 None:intergenic 50.0%
TCATCAAGCCTGTCGTTGCT+AGG + chr2_2:44476022-44476041 None:intergenic 50.0%
!! GAGTCAAAGGTTGGTGTCCA+AGG - chr2_2:44476485-44476504 Msa0252880:CDS 50.0%
ACCAGCAAGATGCTAAGGTG+AGG - chr2_2:44476774-44476793 Msa0252880:CDS 50.0%
TCCTCACCTTAGCATCTTGC+TGG + chr2_2:44476778-44476797 None:intergenic 50.0%
GCAAGATGCTAAGGTGAGGA+AGG - chr2_2:44476778-44476797 Msa0252880:CDS 50.0%
TGTCCCTCCAATCAGCAGAT+TGG + chr2_2:44476868-44476887 None:intergenic 50.0%
!! ATGAACTACCACCGGTTTGC+AGG - chr2_2:44476927-44476946 Msa0252880:CDS 50.0%
AAGACAAACCTGCAAACCGG+TGG + chr2_2:44476938-44476957 None:intergenic 50.0%
! TGCACAGAAAGGGGCCTTTT+TGG + chr2_2:44477234-44477253 None:intergenic 50.0%
CACACTGAGTGCACAGAAAG+GGG + chr2_2:44477243-44477262 None:intergenic 50.0%
! CCTATGGTTAACTCTGGCTC+AGG + chr2_2:44477645-44477664 None:intergenic 50.0%
CCTGAGCCAGAGTTAACCAT+AGG - chr2_2:44477642-44477661 Msa0252880:intron 50.0%
!! TGAGTGCTTGGTAGTGCCTA+TGG + chr2_2:44477661-44477680 None:intergenic 50.0%
ACAAGAGCTCCATGAATGGG+AGG + chr2_2:44477765-44477784 None:intergenic 50.0%
ATCACTTTCGGTATGCCCTC+GGG + chr2_2:44478414-44478433 None:intergenic 50.0%
! GAGGGCATACCGAAAGTGAT+TGG - chr2_2:44478414-44478433 Msa0252880:intron 50.0%
CTCCGCATCCTTACATCTGC+AGG + chr2_2:44474657-44474676 None:intergenic 55.0%
CTGCAGATGTAAGGATGCGG+AGG - chr2_2:44474655-44474674 Msa0252880:intron 55.0%
GGTCAGTAGCCGATGTATCC+GGG - chr2_2:44475273-44475292 Msa0252880:intron 55.0%
ATCGTGACACCAACACGTGG+AGG + chr2_2:44475308-44475327 None:intergenic 55.0%
!! TCCACGTGTTGGTGTCACGA+TGG - chr2_2:44475307-44475326 Msa0252880:intron 55.0%
GAGTGGTAGCTACGGTTAGG+AGG + chr2_2:44475458-44475477 None:intergenic 55.0%
! TGTTTTCGGTGGCTGTGGAG+TGG - chr2_2:44475505-44475524 Msa0252880:intron 55.0%
TGTTGTGGATGGCAAGTGGG+TGG - chr2_2:44475559-44475578 Msa0252880:intron 55.0%
TGGGCCCAAGTGGAAACAAG+TGG - chr2_2:44475722-44475741 Msa0252880:CDS 55.0%
GGGCCCAAGTGGAAACAAGT+GGG - chr2_2:44475723-44475742 Msa0252880:CDS 55.0%
GAAAACACACTACGGGCCGT+TGG + chr2_2:44475755-44475774 None:intergenic 55.0%
CCCTAGTGACCAAGGTCACA+TGG - chr2_2:44475823-44475842 Msa0252880:CDS 55.0%
CCCATGTGACCTTGGTCACT+AGG + chr2_2:44475827-44475846 None:intergenic 55.0%
CGGAGACACTATCATGGACG+AGG - chr2_2:44475885-44475904 Msa0252880:CDS 55.0%
GCAACTCACCTAGCAACGAC+AGG - chr2_2:44476011-44476030 Msa0252880:CDS 55.0%
! GTTAACTCTGGCTCAGGGCA+TGG + chr2_2:44477639-44477658 None:intergenic 55.0%
CGGTGTGCTCCCGGATACAT+CGG + chr2_2:44475285-44475304 None:intergenic 60.0%
GTGACACCAACACGTGGAGG+CGG + chr2_2:44475305-44475324 None:intergenic 60.0%
GCCATCGTGACACCAACACG+TGG + chr2_2:44475311-44475330 None:intergenic 60.0%
! GGTGTCACGATGGCTGCAGT+TGG - chr2_2:44475317-44475336 Msa0252880:intron 60.0%
GGTCATCGGCAGTCATGGAG+TGG + chr2_2:44475475-44475494 None:intergenic 60.0%
ACGTCGGTCATCGGCAGTCA+TGG + chr2_2:44475480-44475499 None:intergenic 60.0%
TTGCAAGGGAAGAGGTGGGC+CGG - chr2_2:44475604-44475623 Msa0252880:CDS 60.0%
!!! GGGCCCATGTTTTTTGGGCC+AGG + chr2_2:44475709-44475728 None:intergenic 60.0%
GACCAAGGTCACATGGGTGC+TGG - chr2_2:44475830-44475849 Msa0252880:CDS 60.0%
GACCAGCACCCATGTGACCT+TGG + chr2_2:44475835-44475854 None:intergenic 60.0%
GTGATCATCCAGGGCCACGT+GGG - chr2_2:44475930-44475949 Msa0252880:CDS 60.0%
! AACTCTGGCTCAGGGCATGG+TGG + chr2_2:44477636-44477655 None:intergenic 60.0%
AGCACACCGCCTCCACGTGT+TGG - chr2_2:44475296-44475315 Msa0252880:intron 65.0%
TTCGGTGGCTGTGGAGTGGC+AGG - chr2_2:44475509-44475528 Msa0252880:intron 65.0%
GTGGCTGTGGAGTGGCAGGA+AGG - chr2_2:44475513-44475532 Msa0252880:intron 65.0%
TGCAAGGGAAGAGGTGGGCC+GGG - chr2_2:44475605-44475624 Msa0252880:CDS 65.0%
GGTGATCATCCAGGGCCACG+TGG - chr2_2:44475929-44475948 Msa0252880:CDS 65.0%
ATCATCCAGGGCCACGTGGG+TGG - chr2_2:44475933-44475952 Msa0252880:CDS 65.0%
GCAAATGCGCACCACCCACG+TGG + chr2_2:44475947-44475966 None:intergenic 65.0%
CGTGGGTGGTGCGCATTTGC+CGG - chr2_2:44475947-44475966 Msa0252880:CDS 65.0%
! GCATTTGCCGGTGCTAGCCG+AGG - chr2_2:44475959-44475978 Msa0252880:CDS 65.0%
TTGGCTGCCTCGGCTAGCAC+CGG + chr2_2:44475969-44475988 None:intergenic 65.0%
TGCTAGCCGAGGCAGCCAAG+AGG - chr2_2:44475970-44475989 Msa0252880:CDS 65.0%
GCTAGCCGAGGCAGCCAAGA+GGG - chr2_2:44475971-44475990 Msa0252880:CDS 65.0%
ACGTGGAGGCGGTGTGCTCC+CGG + chr2_2:44475294-44475313 None:intergenic 70.0%
AGGTGGGCCGGGCCTAACAG+TGG - chr2_2:44475616-44475635 Msa0252880:CDS 70.0%
CCCTGGGCCACTGTTAGGCC+CGG + chr2_2:44475626-44475645 None:intergenic 70.0%
CCGGGCCTAACAGTGGCCCA+GGG - chr2_2:44475623-44475642 Msa0252880:CDS 70.0%
GCCGGGCCTAACAGTGGCCC+AGG - chr2_2:44475622-44475641 Msa0252880:CDS 75.0%
! GCGCACCACCCACGTGGCCC+TGG + chr2_2:44475941-44475960 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 44473938 44478581 44473938 ID=Msa0252880;Name=Msa0252880
chr2_2 mRNA 44473938 44478581 44473938 ID=Msa0252880-mRNA-1;Parent=Msa0252880;Name=Msa0252880-mRNA-1;_AED=0.29;_eAED=0.29;_QI=112|0.25|0.2|1|1|1|5|0|694
chr2_2 exon 44473938 44474216 44473938 ID=Msa0252880-mRNA-1:exon:13644;Parent=Msa0252880-mRNA-1
chr2_2 exon 44474710 44475031 44474710 ID=Msa0252880-mRNA-1:exon:13643;Parent=Msa0252880-mRNA-1
chr2_2 exon 44475571 44476081 44475571 ID=Msa0252880-mRNA-1:exon:13642;Parent=Msa0252880-mRNA-1
chr2_2 exon 44476452 44477394 44476452 ID=Msa0252880-mRNA-1:exon:13641;Parent=Msa0252880-mRNA-1
chr2_2 exon 44478440 44478581 44478440 ID=Msa0252880-mRNA-1:exon:13640;Parent=Msa0252880-mRNA-1
chr2_2 five_prime_UTR 44478470 44478581 44478470 ID=Msa0252880-mRNA-1:five_prime_utr;Parent=Msa0252880-mRNA-1
chr2_2 CDS 44478440 44478469 44478440 ID=Msa0252880-mRNA-1:cds;Parent=Msa0252880-mRNA-1
chr2_2 CDS 44476452 44477394 44476452 ID=Msa0252880-mRNA-1:cds;Parent=Msa0252880-mRNA-1
chr2_2 CDS 44475571 44476081 44475571 ID=Msa0252880-mRNA-1:cds;Parent=Msa0252880-mRNA-1
chr2_2 CDS 44474710 44475031 44474710 ID=Msa0252880-mRNA-1:cds;Parent=Msa0252880-mRNA-1
chr2_2 CDS 44473938 44474216 44473938 ID=Msa0252880-mRNA-1:cds;Parent=Msa0252880-mRNA-1
Gene Sequence

>Msa0252880

ATGGCGATACTTCATGGCAGTTGGTTCAAGCTTGATCAAACAGGAATCTTGCAAGGAGCAAGAAGTTCACATGCTATTGCCGTAGTAGGACAGAAGGTCTATGCATTCGGCGGTGAGTTTGAGCCACGTGTCCCCGTTGATAACAAGTTACACGTGTACGACCTAGATACCTTGACATGGTCAGTAGCCGATGTATCCGGGAGCACACCGCCTCCACGTGTTGGTGTCACGATGGCTGCAGTTGGAGAAACCATCTATGTATTTGGTGGAAGAGATGCTGAACACAATGAACTCAATGAGCTCTATTCTTTTGACACTAAAACCAACAATTGGGCCTTGATTTCAAGTGGAGATGTTGGGCCTCCTAACCGTAGCTACCACTCCATGACTGCCGATGACCGACGTGTGTATGTTTTCGGTGGCTGTGGAGTGGCAGGAAGGCTCAATGATTTATGGGCCTTTGATGTTGTGGATGGCAAGTGGGTGGAATTTCCATCTCCTGGTGAAAGTTGCAAGGGAAGAGGTGGGCCGGGCCTAACAGTGGCCCAGGGAAAAATATGGGTTGTGTATGGTTTCGCTGGAATGGAAGTGGATGACGTGCATTTCTTCGACCTGGCCCAAAAAACATGGGCCCAAGTGGAAACAAGTGGGCTTAAACCAACGGCCCGTAGTGTGTTTTCAACTTGTTTAATTGGGAAACACATAATTGTATATGGTGGGGAAATAGACCCTAGTGACCAAGGTCACATGGGTGCTGGTCAATTTTCAGGTGAGCTTTATGCATTAGACACGGAGACACTATCATGGACGAGGTTGGACGATAAAGTGGAATCAGGTGATCATCCAGGGCCACGTGGGTGGTGCGCATTTGCCGGTGCTAGCCGAGGCAGCCAAGAGGGATTATTAGTGTATGGTGGCAACTCACCTAGCAACGACAGGCTTGATGACATTTTCTTCCTTGCTCTTGCTCAAAGAAATGCTCAAATTTATGACAGAAAAAGTGAACTAAAGGAATTTGATGAGTCAAAGGTTGGTGTCCAAGGACTCATAGAAAATGGTGTAACAAAAGTTCCACGCATGTTCTATTGTGAACAATCTAATATCAATCATGGTTCAGTCAATGAATCAAATTCAAAGCTTAGTGTCCCTACAATTGACTTAACAGGAATCCATGATGATCCTGTTTTGAGAGATGAAGTTGTAAGAAAAGTTCAAAATGCAAGTGAGAAATGGGGATTCTTTCAGGTAATAAATCATGGAATTCCAGTTCATGTTTTGGATGAGATGATCAAAGGGACACGTAGATTTCACCAGCAAGATGCTAAGGTGAGGAAGGAGTACTATACCCGTGATGTCACCAAAAAATTTGTTTATCTTTCCAATTTTACTCTTTATCAAGACCAATCTGCTGATTGGAGGGACACACTTGCATTTTTCTGGGCACCCGATCCTCCTAAAGCTGATGAACTACCACCGGTTTGCAGTGATATTGTGAATGAATACACAAAAGAAGTAATGGAACTTGGATCTTCTTTGTATGAGTTATTGTCAGAAGCTCTTGGCCTTAATCGCTTTCACCTTAAAGAAATGGGTGGTGCTGAGAGTTTTTTACATCTATGTCATTATTATCCACCATGCCCTGAGCCAGAGTTAACCATAGGCACTACCAAGCACTCAGATGCTAGCTTTATTACAGTACTTTTGCAAGATCATATTGGTGGCCTACAAATTCTTCATGACAATCAGTGGATTGATTTACCTCCCATTCATGGAGCTCTTGTAGTGAACATTGGAGATCTTCTACAGCTTGTGAGTAATGACAAGTTCACAAGTGTTCAGCACAGAGTTTTAGCAAAAAGTATAGGCCCAAGAATTTCAGCTGCAACCCTTTTTAGAACAGAAAATGATCATTCTCCCGAGGGCATACCGAAAGTGATTGGACCAATCAAGGAACTTTTATCTGAAGAAAACCCACCAATATATAGAGATACTTCTTTGAAAGAGTACTTGGCATATCGTTTTTCAAACGGTCTTGGAGCTTCTGCACTATCACCCTTCAAGTTGTTACACAAAGAAGCAACTTAG
Protein sequence

>Msa0252880

MAILHGSWFKLDQTGILQGARSSHAIAVVGQKVYAFGGEFEPRVPVDNKLHVYDLDTLTWSVADVSGSTPPPRVGVTMAAVGETIYVFGGRDAEHNELNELYSFDTKTNNWALISSGDVGPPNRSYHSMTADDRRVYVFGGCGVAGRLNDLWAFDVVDGKWVEFPSPGESCKGRGGPGLTVAQGKIWVVYGFAGMEVDDVHFFDLAQKTWAQVETSGLKPTARSVFSTCLIGKHIIVYGGEIDPSDQGHMGAGQFSGELYALDTETLSWTRLDDKVESGDHPGPRGWCAFAGASRGSQEGLLVYGGNSPSNDRLDDIFFLALAQRNAQIYDRKSELKEFDESKVGVQGLIENGVTKVPRMFYCEQSNINHGSVNESNSKLSVPTIDLTGIHDDPVLRDEVVRKVQNASEKWGFFQVINHGIPVHVLDEMIKGTRRFHQQDAKVRKEYYTRDVTKKFVYLSNFTLYQDQSADWRDTLAFFWAPDPPKADELPPVCSDIVNEYTKEVMELGSSLYELLSEALGLNRFHLKEMGGAESFLHLCHYYPPCPEPELTIGTTKHSDASFITVLLQDHIGGLQILHDNQWIDLPPIHGALVVNIGDLLQLVSNDKFTSVQHRVLAKSIGPRISAATLFRTENDHSPEGIPKVIGPIKELLSEENPPIYRDTSLKEYLAYRFSNGLGASALSPFKLLHKEAT*