Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756250 | sp|Q54II8|QSPP_DICDI | 41.824 | 318 | 166 | 6 | 4 | 305 | 7 | 321 | 6.75e-78 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756250 | G7K3V0 | 98.033 | 305 | 6 | 0 | 1 | 305 | 1 | 305 | 0.0 | 616 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074030 | Msa0756250 | 0.802782 | 4.764164e-49 | -8.615850e-47 |
| Msa0116670 | Msa0756250 | 0.821941 | 3.088132e-53 | -8.615850e-47 |
| Msa0709780 | Msa0756250 | 0.805178 | 1.513122e-49 | -8.615850e-47 |
| Msa0756250 | Msa0797870 | 0.916167 | 2.465391e-85 | -8.615850e-47 |
| Msa0756250 | Msa0835410 | 0.837998 | 3.733691e-57 | -8.615850e-47 |
| Msa0173530 | Msa0756250 | 0.819858 | 9.313886e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756250 | MtrunA17_Chr5g0401381 | 98.033 | 305 | 6 | 0 | 1 | 305 | 1 | 305 | 0.0 | 616 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTGAATTATGATAATT+TGG | 0.163853 | 5_2:+10328866 | Msa0756250:CDS |
| AGATATTTGCAGCAGATTTA+TGG | 0.178599 | 5_2:+10329978 | Msa0756250:CDS |
| CAGATTTATGGGGTGCATTT+CGG | 0.186692 | 5_2:+10329990 | Msa0756250:CDS |
| AGATTTATGGGGTGCATTTC+GGG | 0.205280 | 5_2:+10329991 | Msa0756250:CDS |
| GTAGATACGTTTGCGTGTTT+TGG | 0.238706 | 5_2:-10326674 | None:intergenic |
| CATGTCGTTGTTGACCCTTC+AGG | 0.247834 | 5_2:+10326884 | Msa0756250:CDS |
| TGTTCAGTACTTGTTTGTTT+TGG | 0.290429 | 5_2:+10327083 | Msa0756250:CDS |
| GATCTTTGGCTTTGGGCAAC+TGG | 0.297869 | 5_2:+10330715 | Msa0756250:CDS |
| AATTATGATAATTTGGCATC+TGG | 0.302437 | 5_2:+10328873 | Msa0756250:CDS |
| TCAGTGTGGAGCTGGATCTT+TGG | 0.305183 | 5_2:+10330701 | Msa0756250:CDS |
| TGGAGCTGGATCTTTGGCTT+TGG | 0.309645 | 5_2:+10330707 | Msa0756250:CDS |
| GGAGCTGGATCTTTGGCTTT+GGG | 0.318143 | 5_2:+10330708 | Msa0756250:CDS |
| AAAGGTGATACCTTAGCTTT+TGG | 0.318612 | 5_2:+10330991 | Msa0756250:three_prime_UTR |
| GATATTTGCAGCAGATTTAT+GGG | 0.335872 | 5_2:+10329979 | Msa0756250:CDS |
| AACAATGTAGTCTGCCATTA+TGG | 0.338975 | 5_2:-10330053 | None:intergenic |
| ATTATTAAGCATATGATATA+TGG | 0.344993 | 5_2:+10330782 | Msa0756250:exon |
| CCAAGCTGCTGAAGCACAGC+TGG | 0.390431 | 5_2:-10330076 | None:intergenic |
| TTGCTAGGTTGGAATTGAAC+TGG | 0.395328 | 5_2:+10329708 | Msa0756250:intron |
| CCAGCTGTGCTTCAGCAGCT+TGG | 0.419904 | 5_2:+10330076 | Msa0756250:CDS |
| GACCGTCTGCAAAAGTATAC+TGG | 0.421036 | 5_2:+10328939 | Msa0756250:CDS |
| TGGGGTGCATTTCGGGGCCA+TGG | 0.425075 | 5_2:+10329998 | Msa0756250:CDS |
| ATTCTATTCCGAAGGTTGAA+TGG | 0.431021 | 5_2:+10327019 | Msa0756250:CDS |
| TTGGCCTAGACCCCTTCCTT+TGG | 0.431477 | 5_2:+10329523 | Msa0756250:CDS |
| TCAGGTGCTCAGTGTGGAGC+TGG | 0.433731 | 5_2:+10330693 | Msa0756250:intron |
| TCAAAATCCCATTCAACCTT+CGG | 0.437178 | 5_2:-10327027 | None:intergenic |
| TCTTCCAAAGGAAGGGGTCT+AGG | 0.445497 | 5_2:-10329527 | None:intergenic |
| AATAATATATTGAAAGTGTT+CGG | 0.447093 | 5_2:-10330765 | None:intergenic |
| GCATTTCGGGGCCATGGATA+CGG | 0.449371 | 5_2:+10330004 | Msa0756250:CDS |
| GCCAGTGGAGAAATATGTCC+AGG | 0.449860 | 5_2:+10330139 | Msa0756250:CDS |
| CATCAGCTCTCTGACCATAA+TGG | 0.451433 | 5_2:+10330039 | Msa0756250:CDS |
| CTTTGGAAGATGAACGCGTT+AGG | 0.454985 | 5_2:+10329540 | Msa0756250:CDS |
| AAGGTGAATGACTGTACCTT+TGG | 0.455818 | 5_2:+10330877 | Msa0756250:three_prime_UTR |
| TTCTATTCCGAAGGTTGAAT+GGG | 0.459281 | 5_2:+10327020 | Msa0756250:CDS |
| ATTATGATAATTTGGCATCT+GGG | 0.462458 | 5_2:+10328874 | Msa0756250:CDS |
| GACGGCCTTTGTACACTGAA+TGG | 0.473528 | 5_2:-10329931 | None:intergenic |
| TAAGGTAACTATCTAAGAAA+AGG | 0.484127 | 5_2:+10330858 | Msa0756250:three_prime_UTR |
| CGCGTTCATCTTCCAAAGGA+AGG | 0.485272 | 5_2:-10329535 | None:intergenic |
| CCCTGGACATATTTCTCCAC+TGG | 0.492184 | 5_2:-10330140 | None:intergenic |
| ACGTTCGAGCTACCTCTGCT+TGG | 0.492230 | 5_2:+10326843 | Msa0756250:CDS |
| TCAACTTCCTCCTCAGTCCC+TGG | 0.495373 | 5_2:-10330157 | None:intergenic |
| CACCATTGATTCTATTCCGA+AGG | 0.499858 | 5_2:+10327011 | Msa0756250:CDS |
| AACCTTCGGAATAGAATCAA+TGG | 0.502139 | 5_2:-10327013 | None:intergenic |
| GAGCTGATAAGCGTAAAATC+AGG | 0.504065 | 5_2:+10330220 | Msa0756250:CDS |
| TCCACTGGCCTCAATAGTAC+TGG | 0.513718 | 5_2:-10330125 | None:intergenic |
| TAATTTGGCATCTGGGCTAA+AGG | 0.516976 | 5_2:+10328881 | Msa0756250:CDS |
| TACATGCTGTGGAGAAAATG+AGG | 0.519155 | 5_2:+10330197 | Msa0756250:CDS |
| TTCAAAAGCTCACGAAGTTG+TGG | 0.524231 | 5_2:-10329500 | None:intergenic |
| CGTTCGAGCTACCTCTGCTT+GGG | 0.529517 | 5_2:+10326844 | Msa0756250:CDS |
| CTTTAAACTCGCCGTATCCA+TGG | 0.531080 | 5_2:-10330015 | None:intergenic |
| GTTCATTCATCACATTGAAA+CGG | 0.531381 | 5_2:+10326790 | Msa0756250:five_prime_UTR |
| GCGTTCATCTTCCAAAGGAA+GGG | 0.542409 | 5_2:-10329534 | None:intergenic |
| AGGAAAATGACGTGCAACAA+GGG | 0.556066 | 5_2:-10329800 | None:intergenic |
| TCAATAGTACTGGCAAGTGT+TGG | 0.562581 | 5_2:-10330115 | None:intergenic |
| GTCATTTCAGGTGCTCAGTG+TGG | 0.563843 | 5_2:+10330687 | Msa0756250:intron |
| GCAGCATTGTGAAAACTCAA+TGG | 0.565465 | 5_2:+10326817 | Msa0756250:exon |
| TTGAACTGAACCAAAAGCTA+AGG | 0.575521 | 5_2:-10331001 | None:intergenic |
| CGTTCATCTTCCAAAGGAAG+GGG | 0.577505 | 5_2:-10329533 | None:intergenic |
| AGGTTGGAATTGAACTGGAA+AGG | 0.582837 | 5_2:+10329713 | Msa0756250:intron |
| AACACTTGCCAGTACTATTG+AGG | 0.585591 | 5_2:+10330117 | Msa0756250:CDS |
| ACGCGTTAGGTTACTTCATG+AGG | 0.590346 | 5_2:+10329553 | Msa0756250:CDS |
| CAGGAAAATGACGTGCAACA+AGG | 0.591199 | 5_2:-10329801 | None:intergenic |
| AACAAGTACTGAACAGTGAG+TGG | 0.598592 | 5_2:-10327075 | None:intergenic |
| AGAAATATGTCCAGGGACTG+AGG | 0.600199 | 5_2:+10330147 | Msa0756250:CDS |
| TCTAATCTTGTTGAGCAATG+TGG | 0.610404 | 5_2:+10329754 | Msa0756250:CDS |
| GATTTATGGGGTGCATTTCG+GGG | 0.613900 | 5_2:+10329992 | Msa0756250:CDS |
| TGCTTGCTCTATACATGCTG+TGG | 0.616690 | 5_2:+10330186 | Msa0756250:CDS |
| GACACAAGTTTGCATCTGCA+CGG | 0.627606 | 5_2:+10330927 | Msa0756250:three_prime_UTR |
| GCCAGTACTATTGAGGCCAG+TGG | 0.629085 | 5_2:+10330124 | Msa0756250:CDS |
| GAATGAAGAATGAACCTGAA+GGG | 0.630480 | 5_2:-10326898 | None:intergenic |
| GTGACTAGCGACCCAAGCAG+AGG | 0.631762 | 5_2:-10326855 | None:intergenic |
| ATATTTGCAGCAGATTTATG+GGG | 0.637528 | 5_2:+10329980 | Msa0756250:CDS |
| ATTACAAAAGCTAATACCAA+AGG | 0.638722 | 5_2:-10330893 | None:intergenic |
| AATATATTGAAAGTGTTCGG+TGG | 0.644057 | 5_2:-10330762 | None:intergenic |
| AGGGTCAACAACGACATGAG+AGG | 0.647077 | 5_2:-10326879 | None:intergenic |
| AAGCGTAAAATCAGGAACAC+CGG | 0.650815 | 5_2:+10330228 | Msa0756250:CDS |
| AGAGACCATTCAGTGTACAA+AGG | 0.651647 | 5_2:+10329926 | Msa0756250:CDS |
| ACATGCTGTGGAGAAAATGA+GGG | 0.657262 | 5_2:+10330198 | Msa0756250:CDS |
| TTTGGCATCTGGGCTAAAGG+CGG | 0.659504 | 5_2:+10328884 | Msa0756250:CDS |
| CTAACGCGTTCATCTTCCAA+AGG | 0.660325 | 5_2:-10329539 | None:intergenic |
| CCAGTGGAGAAATATGTCCA+GGG | 0.676368 | 5_2:+10330140 | Msa0756250:CDS |
| AATATGTCCAGGGACTGAGG+AGG | 0.705255 | 5_2:+10330150 | Msa0756250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATAAAAATACTTGA+CGG | - | chr5_2:10329952-10329971 | None:intergenic | 10.0% |
| !!! | ATTATTTTCATATAAGCTAA+AGG | + | chr5_2:10327668-10327687 | Msa0756250:intron | 15.0% |
| !! | ACATAATATGAATATGAAAA+TGG | + | chr5_2:10327905-10327924 | Msa0756250:intron | 15.0% |
| !!! | TTTTTCAAAAGTAATTGATT+TGG | + | chr5_2:10327980-10327999 | Msa0756250:intron | 15.0% |
| !! | AGAAATAATCATATATCATA+TGG | + | chr5_2:10328522-10328541 | Msa0756250:intron | 15.0% |
| !!! | AATAATATATTGAAAGTGTT+CGG | - | chr5_2:10330768-10330787 | None:intergenic | 15.0% |
| !! | ATTATTAAGCATATGATATA+TGG | + | chr5_2:10330782-10330801 | Msa0756250:exon | 15.0% |
| !!! | TTCAATTTATCTGCATATTT+TGG | + | chr5_2:10327416-10327435 | Msa0756250:intron | 20.0% |
| !! | ATATTAATAAAGCAATACAC+AGG | - | chr5_2:10328031-10328050 | None:intergenic | 20.0% |
| !! | CAACTCTTTGTATTAAATTA+AGG | + | chr5_2:10328200-10328219 | Msa0756250:intron | 20.0% |
| !! | TTTGTATTAAATTAAGGCAT+CGG | + | chr5_2:10328206-10328225 | Msa0756250:intron | 20.0% |
| !! | TCAACAAATGAAAGAAAATA+AGG | - | chr5_2:10328500-10328519 | None:intergenic | 20.0% |
| !!! | TTGTTGGTTTTTATTCTTTT+TGG | + | chr5_2:10328550-10328569 | Msa0756250:intron | 20.0% |
| !! | AGTTGACAAATATATGAAAT+AGG | + | chr5_2:10328722-10328741 | Msa0756250:intron | 20.0% |
| !! | ACAAATATATGAAATAGGAT+TGG | + | chr5_2:10328727-10328746 | Msa0756250:intron | 20.0% |
| !! | GGATTTGAATTATGATAATT+TGG | + | chr5_2:10328866-10328885 | Msa0756250:CDS | 20.0% |
| !!! | GTATTTTCAAAAAGATGTAT+TGG | + | chr5_2:10329377-10329396 | Msa0756250:intron | 20.0% |
| !! | CAAATTCAATTCATAATGTT+AGG | + | chr5_2:10329476-10329495 | Msa0756250:intron | 20.0% |
| !!! | AGCTTTTGTAATTTTGAAAA+TGG | + | chr5_2:10330904-10330923 | Msa0756250:three_prime_UTR | 20.0% |
| !!! | GCTTTTGTAATTTTGAAAAT+GGG | + | chr5_2:10330905-10330924 | Msa0756250:three_prime_UTR | 20.0% |
| !! | TTCGAAAAAATTTCTACAAA+AGG | + | chr5_2:10330973-10330992 | Msa0756250:three_prime_UTR | 20.0% |
| !!! | TGATTATGCGATTTTTTTCA+GGG | + | chr5_2:10326971-10326990 | Msa0756250:intron | 25.0% |
| !!! | GGGATTCATTATTTTGATAA+TGG | + | chr5_2:10327051-10327070 | Msa0756250:CDS | 25.0% |
| !! | TTTCTTTCAAGTGTAATGTA+TGG | + | chr5_2:10327334-10327353 | Msa0756250:intron | 25.0% |
| ! | GATAAATATGCAAAAAACAG+GGG | - | chr5_2:10327370-10327389 | None:intergenic | 25.0% |
| ! | CGATAAATATGCAAAAAACA+GGG | - | chr5_2:10327371-10327390 | None:intergenic | 25.0% |
| ! | ACGATAAATATGCAAAAAAC+AGG | - | chr5_2:10327372-10327391 | None:intergenic | 25.0% |
| ! | GAATTCATTGCATAATAACA+AGG | - | chr5_2:10327451-10327470 | None:intergenic | 25.0% |
| ! | TGTGATTAAGTTAATATACC+TGG | + | chr5_2:10327866-10327885 | Msa0756250:intron | 25.0% |
| ! | GAAAAATAACATCACAGATA+TGG | - | chr5_2:10327966-10327985 | None:intergenic | 25.0% |
| !! | ACATTTTGTCAACTACATTT+TGG | + | chr5_2:10328003-10328022 | Msa0756250:intron | 25.0% |
| ! | AAGATGAATATGTTTGAAAG+CGG | - | chr5_2:10328099-10328118 | None:intergenic | 25.0% |
| ! | ATATCATATGGAACTATTGT+TGG | + | chr5_2:10328534-10328553 | Msa0756250:intron | 25.0% |
| !! | AATCTTTTCTCGTTATGTAA+AGG | - | chr5_2:10328625-10328644 | None:intergenic | 25.0% |
| ! | AAGATTATGATAGTTGTTGT+TGG | + | chr5_2:10328639-10328658 | Msa0756250:intron | 25.0% |
| !! | AGATTATGATAGTTGTTGTT+GGG | + | chr5_2:10328640-10328659 | Msa0756250:intron | 25.0% |
| ! | AATTATGATAATTTGGCATC+TGG | + | chr5_2:10328873-10328892 | Msa0756250:CDS | 25.0% |
| ! | ATTATGATAATTTGGCATCT+GGG | + | chr5_2:10328874-10328893 | Msa0756250:CDS | 25.0% |
| ! | AAAACATGAACTGTATTGAA+GGG | - | chr5_2:10329057-10329076 | None:intergenic | 25.0% |
| ! | AAAAACATGAACTGTATTGA+AGG | - | chr5_2:10329058-10329077 | None:intergenic | 25.0% |
| !! | ATCTAATCTTTTTCTTCAAG+TGG | + | chr5_2:10329352-10329371 | Msa0756250:intron | 25.0% |
| ! | AAGACAAGAAAAGAAGAAAA+TGG | - | chr5_2:10329832-10329851 | None:intergenic | 25.0% |
| ! | TTCCTTGTATGACAATTAAA+GGG | - | chr5_2:10330375-10330394 | None:intergenic | 25.0% |
| ! | ATTCCTTGTATGACAATTAA+AGG | - | chr5_2:10330376-10330395 | None:intergenic | 25.0% |
| ! | CATGTAAAAATTGTATGAAG+TGG | + | chr5_2:10330479-10330498 | Msa0756250:intron | 25.0% |
| !! | ATATGGTATTATGTCATTTC+AGG | + | chr5_2:10330675-10330694 | Msa0756250:intron | 25.0% |
| !! | TAGAACAAGAAAATTTTGTC+TGG | + | chr5_2:10330833-10330852 | Msa0756250:three_prime_UTR | 25.0% |
| !!! | AGAAAATTTTGTCTGGTTTA+AGG | + | chr5_2:10330840-10330859 | Msa0756250:three_prime_UTR | 25.0% |
| ! | TAAGGTAACTATCTAAGAAA+AGG | + | chr5_2:10330858-10330877 | Msa0756250:three_prime_UTR | 25.0% |
| ! | ATTACAAAAGCTAATACCAA+AGG | - | chr5_2:10330896-10330915 | None:intergenic | 25.0% |
| ! | CAAAGCTTTATGGAAAAAAC+TGG | - | chr5_2:10326761-10326780 | None:intergenic | 30.0% |
| !!! | CAGTTTTTTCCATAAAGCTT+TGG | + | chr5_2:10326759-10326778 | Msa0756250:five_prime_UTR | 30.0% |
| !!! | TCCATAAAGCTTTGGTTTTT+AGG | + | chr5_2:10326767-10326786 | Msa0756250:five_prime_UTR | 30.0% |
| !!! | CCATAAAGCTTTGGTTTTTA+GGG | + | chr5_2:10326768-10326787 | Msa0756250:five_prime_UTR | 30.0% |
| GTTCATTCATCACATTGAAA+CGG | + | chr5_2:10326790-10326809 | Msa0756250:five_prime_UTR | 30.0% | |
| !!! | GTGATTATGCGATTTTTTTC+AGG | + | chr5_2:10326970-10326989 | Msa0756250:intron | 30.0% |
| ! | TGTTCAGTACTTGTTTGTTT+TGG | + | chr5_2:10327083-10327102 | Msa0756250:CDS | 30.0% |
| AAAATTACTACATACGTACC+AGG | - | chr5_2:10327132-10327151 | None:intergenic | 30.0% | |
| TGCAATGAATTCATGTTGAT+TGG | + | chr5_2:10327459-10327478 | Msa0756250:intron | 30.0% | |
| ! | TGAATTCATGTTGATTGGTT+TGG | + | chr5_2:10327464-10327483 | Msa0756250:intron | 30.0% |
| GTGTACCTATAACTAGAAAA+AGG | + | chr5_2:10327488-10327507 | Msa0756250:intron | 30.0% | |
| AATTCTAGTATAGACATGCT+TGG | + | chr5_2:10327546-10327565 | Msa0756250:intron | 30.0% | |
| !! | CTTATTTTCACAAGCTTTTC+AGG | - | chr5_2:10327711-10327730 | None:intergenic | 30.0% |
| ! | AATAAGTTGAAAGTTGTTCG+TGG | + | chr5_2:10327725-10327744 | Msa0756250:intron | 30.0% |
| AAACACTTGTGAGATTATGT+CGG | - | chr5_2:10327780-10327799 | None:intergenic | 30.0% | |
| TACCAAAAAAGTTCTTGCAA+GGG | - | chr5_2:10327842-10327861 | None:intergenic | 30.0% | |
| ATACCAAAAAAGTTCTTGCA+AGG | - | chr5_2:10327843-10327862 | None:intergenic | 30.0% | |
| TATTCAAGAGGTTGCAAATT+TGG | + | chr5_2:10327936-10327955 | Msa0756250:intron | 30.0% | |
| AATATTGTGTGACTAATTGC+TGG | + | chr5_2:10328046-10328065 | Msa0756250:intron | 30.0% | |
| TAGCATTTGTCAATAAAGGA+AGG | - | chr5_2:10328076-10328095 | None:intergenic | 30.0% | |
| TTCAAACATATTCATCTTCC+TGG | + | chr5_2:10328101-10328120 | Msa0756250:intron | 30.0% | |
| AACTGTCAAAAACTACCAAA+AGG | - | chr5_2:10328361-10328380 | None:intergenic | 30.0% | |
| !!! | TATTCTTTTTGGTGTTGAGT+TGG | + | chr5_2:10328561-10328580 | Msa0756250:intron | 30.0% |
| GTAAAATATCTCCTAGTCAT+AGG | + | chr5_2:10328749-10328768 | Msa0756250:intron | 30.0% | |
| TATGCTAAAATCCTATGACT+AGG | - | chr5_2:10328763-10328782 | None:intergenic | 30.0% | |
| ! | TTCTTGTTTCACAACAGATA+AGG | + | chr5_2:10328845-10328864 | Msa0756250:intron | 30.0% |
| AAACATGAACTGTATTGAAG+GGG | - | chr5_2:10329056-10329075 | None:intergenic | 30.0% | |
| ! | TGATATTTGAGACTACAGTT+TGG | + | chr5_2:10329087-10329106 | Msa0756250:intron | 30.0% |
| AGTTTGGTAGGAATATTCAA+GGG | + | chr5_2:10329103-10329122 | Msa0756250:intron | 30.0% | |
| TACAGTTACATATCACTTAG+TGG | + | chr5_2:10329169-10329188 | Msa0756250:intron | 30.0% | |
| AAAACTATTGCGTTCAAACT+GGG | - | chr5_2:10329253-10329272 | None:intergenic | 30.0% | |
| TTGCATATAACTGTGACTAA+AGG | - | chr5_2:10329606-10329625 | None:intergenic | 30.0% | |
| AGATATTTGCAGCAGATTTA+TGG | + | chr5_2:10329978-10329997 | Msa0756250:CDS | 30.0% | |
| GATATTTGCAGCAGATTTAT+GGG | + | chr5_2:10329979-10329998 | Msa0756250:CDS | 30.0% | |
| ATATTTGCAGCAGATTTATG+GGG | + | chr5_2:10329980-10329999 | Msa0756250:CDS | 30.0% | |
| AACTCTATACATTGAACATG+GGG | - | chr5_2:10330292-10330311 | None:intergenic | 30.0% | |
| GAACTCTATACATTGAACAT+GGG | - | chr5_2:10330293-10330312 | None:intergenic | 30.0% | |
| AGAACTCTATACATTGAACA+TGG | - | chr5_2:10330294-10330313 | None:intergenic | 30.0% | |
| AAAAGTAAACGACAATTGAC+TGG | + | chr5_2:10330344-10330363 | Msa0756250:intron | 30.0% | |
| TTCCCTTTAATTGTCATACA+AGG | + | chr5_2:10330370-10330389 | Msa0756250:intron | 30.0% | |
| CGTGTAAAAATTGTATGAAG+TGG | + | chr5_2:10330453-10330472 | Msa0756250:intron | 30.0% | |
| !!! | TGGTGACATATTTTAGAGTT+TGG | + | chr5_2:10330499-10330518 | Msa0756250:intron | 30.0% |
| CCATATTTAAGTCAGAAAGA+TGG | - | chr5_2:10330661-10330680 | None:intergenic | 30.0% | |
| CCATCTTTCTGACTTAAATA+TGG | + | chr5_2:10330658-10330677 | Msa0756250:intron | 30.0% | |
| !! | AATATATTGAAAGTGTTCGG+TGG | - | chr5_2:10330765-10330784 | None:intergenic | 30.0% |
| ! | TAGATACGTTTGCGTGTTTT+GGG | - | chr5_2:10326676-10326695 | None:intergenic | 35.0% |
| CCCTAAAAACCAAAGCTTTA+TGG | - | chr5_2:10326771-10326790 | None:intergenic | 35.0% | |
| GAATGAAGAATGAACCTGAA+GGG | - | chr5_2:10326901-10326920 | None:intergenic | 35.0% | |
| TGAAAAAGATACAGCGTTAG+TGG | - | chr5_2:10326923-10326942 | None:intergenic | 35.0% | |
| AACCTTCGGAATAGAATCAA+TGG | - | chr5_2:10327016-10327035 | None:intergenic | 35.0% | |
| ATTCTATTCCGAAGGTTGAA+TGG | + | chr5_2:10327019-10327038 | Msa0756250:CDS | 35.0% | |
| TTCTATTCCGAAGGTTGAAT+GGG | + | chr5_2:10327020-10327039 | Msa0756250:CDS | 35.0% | |
| TCAAAATCCCATTCAACCTT+CGG | - | chr5_2:10327030-10327049 | None:intergenic | 35.0% | |
| ! | AAGGTTGAATGGGATTTTGA+AGG | + | chr5_2:10327030-10327049 | Msa0756250:CDS | 35.0% |
| ! | AGGTTGAATGGGATTTTGAA+GGG | + | chr5_2:10327031-10327050 | Msa0756250:CDS | 35.0% |
| !! | ATGCTTTGAACTTTTGCTTC+TGG | + | chr5_2:10327106-10327125 | Msa0756250:CDS | 35.0% |
| TCATATGTTCATGCCATTGT+TGG | + | chr5_2:10327249-10327268 | Msa0756250:intron | 35.0% | |
| ! | AGTGTAATGTATGGTGTTGA+TGG | + | chr5_2:10327343-10327362 | Msa0756250:intron | 35.0% |
| !!! | CGTCTCCTTTTTCTAGTTAT+AGG | - | chr5_2:10327496-10327515 | None:intergenic | 35.0% |
| ! | CTTTTCTCGTTACAAGAGTT+TGG | + | chr5_2:10327517-10327536 | Msa0756250:intron | 35.0% |
| ATGGTCTGTGAATATTCAAG+AGG | + | chr5_2:10327924-10327943 | Msa0756250:intron | 35.0% | |
| ! | GATCGTTGATTAAAAATGCC+AGG | - | chr5_2:10328122-10328141 | None:intergenic | 35.0% |
| TAGTACAGAACAGAATCAAC+TGG | + | chr5_2:10328390-10328409 | Msa0756250:intron | 35.0% | |
| ! | CTTCTCTCTGTTCGATTTTA+AGG | + | chr5_2:10328453-10328472 | Msa0756250:intron | 35.0% |
| !! | TGTTCGATTTTAAGGAGACT+AGG | + | chr5_2:10328461-10328480 | Msa0756250:intron | 35.0% |
| GTTATGTAAAGGCTACTATG+TGG | - | chr5_2:10328614-10328633 | None:intergenic | 35.0% | |
| ! | GTGTTATTAGGATGATTAGC+CGG | + | chr5_2:10328677-10328696 | Msa0756250:intron | 35.0% |
| ATGTCAACTAAACAACTGAC+CGG | - | chr5_2:10328699-10328718 | None:intergenic | 35.0% | |
| ! | TTAGCATATCTTTTTCCCTC+TGG | + | chr5_2:10328775-10328794 | Msa0756250:intron | 35.0% |
| AAAGAACAGAAATAATGCCG+AGG | - | chr5_2:10328808-10328827 | None:intergenic | 35.0% | |
| ! | TACCAGTATACTTTTGCAGA+CGG | - | chr5_2:10328944-10328963 | None:intergenic | 35.0% |
| AGTATACTGGTAATTCTGCT+AGG | + | chr5_2:10328952-10328971 | Msa0756250:intron | 35.0% | |
| TTACATCGTCATGCATAGAT+TGG | + | chr5_2:10328999-10329018 | Msa0756250:intron | 35.0% | |
| ! | ATTTGAGACTACAGTTTGGT+AGG | + | chr5_2:10329091-10329110 | Msa0756250:intron | 35.0% |
| CAGTTTGGTAGGAATATTCA+AGG | + | chr5_2:10329102-10329121 | Msa0756250:intron | 35.0% | |
| TCACTTAGTGGTTCTTAATC+AGG | + | chr5_2:10329181-10329200 | Msa0756250:intron | 35.0% | |
| CAAAACTATTGCGTTCAAAC+TGG | - | chr5_2:10329254-10329273 | None:intergenic | 35.0% | |
| ! | AACTTCGTGAGCTTTTGAAT+TGG | + | chr5_2:10329504-10329523 | Msa0756250:CDS | 35.0% |
| TACCATTCACTTCTATTGCT+AGG | + | chr5_2:10329693-10329712 | Msa0756250:intron | 35.0% | |
| AACCTAGCAATAGAAGTGAA+TGG | - | chr5_2:10329698-10329717 | None:intergenic | 35.0% | |
| ATTCACTTCTATTGCTAGGT+TGG | + | chr5_2:10329697-10329716 | Msa0756250:intron | 35.0% | |
| ! | GAACTGGAAAGGAATTTTGA+CGG | + | chr5_2:10329724-10329743 | Msa0756250:CDS | 35.0% |
| TCTAATCTTGTTGAGCAATG+TGG | + | chr5_2:10329754-10329773 | Msa0756250:CDS | 35.0% | |
| AAAGAAGAAAATGGTCTACC+AGG | - | chr5_2:10329823-10329842 | None:intergenic | 35.0% | |
| CCTAGAACATTTCATAGCAA+GGG | - | chr5_2:10329902-10329921 | None:intergenic | 35.0% | |
| AACAATGTAGTCTGCCATTA+TGG | - | chr5_2:10330056-10330075 | None:intergenic | 35.0% | |
| AATCAGAGAAAAGAACTCAC+CGG | - | chr5_2:10330250-10330269 | None:intergenic | 35.0% | |
| CATACAAGGAATCATTTCCT+CGG | + | chr5_2:10330384-10330403 | Msa0756250:intron | 35.0% | |
| !! | GAGTTTGGTAATGTATCAGT+AGG | + | chr5_2:10330514-10330533 | Msa0756250:intron | 35.0% |
| !! | TTTTTCAGTTTCAGGCAAGA+GGG | - | chr5_2:10330585-10330604 | None:intergenic | 35.0% |
| !! | ATTTTTCAGTTTCAGGCAAG+AGG | - | chr5_2:10330586-10330605 | None:intergenic | 35.0% |
| ATAAGTGAAGTGAAGAGTGA+TGG | - | chr5_2:10330614-10330633 | None:intergenic | 35.0% | |
| !! | AAAGGTGATACCTTAGCTTT+TGG | + | chr5_2:10330991-10331010 | Msa0756250:three_prime_UTR | 35.0% |
| ! | GTAGATACGTTTGCGTGTTT+TGG | - | chr5_2:10326677-10326696 | None:intergenic | 40.0% |
| !! | CGTTTTGTTCTTAGTTTCGC+GGG | - | chr5_2:10326721-10326740 | None:intergenic | 40.0% |
| !! | GCGTTTTGTTCTTAGTTTCG+CGG | - | chr5_2:10326722-10326741 | None:intergenic | 40.0% |
| GCAGCATTGTGAAAACTCAA+TGG | + | chr5_2:10326817-10326836 | Msa0756250:exon | 40.0% | |
| GGAATGAAGAATGAACCTGA+AGG | - | chr5_2:10326902-10326921 | None:intergenic | 40.0% | |
| !! | CACCATTGATTCTATTCCGA+AGG | + | chr5_2:10327011-10327030 | Msa0756250:CDS | 40.0% |
| !! | AACAAGTACTGAACAGTGAG+TGG | - | chr5_2:10327078-10327097 | None:intergenic | 40.0% |
| AGAAGACGTGTTTCACATGT+CGG | - | chr5_2:10327287-10327306 | None:intergenic | 40.0% | |
| AGATTATGTCGGAGAGCTTA+TGG | - | chr5_2:10327769-10327788 | None:intergenic | 40.0% | |
| !! | TTGCAAGGGCTAGTTTGAAT+TGG | - | chr5_2:10327828-10327847 | None:intergenic | 40.0% |
| !!! | AGCCCTTGCAAGAACTTTTT+TGG | + | chr5_2:10327837-10327856 | Msa0756250:intron | 40.0% |
| GCGGTAGCATTTGTCAATAA+AGG | - | chr5_2:10328080-10328099 | None:intergenic | 40.0% | |
| GCAGTGTATACGCAATTGTA+TGG | - | chr5_2:10328262-10328281 | None:intergenic | 40.0% | |
| TTGTGTGTCTAGCACAGTAA+GGG | - | chr5_2:10328284-10328303 | None:intergenic | 40.0% | |
| TTTGTGTGTCTAGCACAGTA+AGG | - | chr5_2:10328285-10328304 | None:intergenic | 40.0% | |
| ! | GTTCTTGACAACACACCTTT+TGG | + | chr5_2:10328343-10328362 | Msa0756250:intron | 40.0% |
| TACAGAACAGAATCAACTGG+AGG | + | chr5_2:10328393-10328412 | Msa0756250:intron | 40.0% | |
| GGAGGTAAGAAATTGTGCTT+AGG | + | chr5_2:10328411-10328430 | Msa0756250:intron | 40.0% | |
| !! | TCGATTTTAAGGAGACTAGG+TGG | + | chr5_2:10328464-10328483 | Msa0756250:intron | 40.0% |
| GAGTTGGAGTTTGAACACAA+TGG | + | chr5_2:10328577-10328596 | Msa0756250:intron | 40.0% | |
| ! | ATGATAGTTGTTGTTGGGTG+TGG | + | chr5_2:10328645-10328664 | Msa0756250:intron | 40.0% |
| TAATTTGGCATCTGGGCTAA+AGG | + | chr5_2:10328881-10328900 | Msa0756250:CDS | 40.0% | |
| GTTTGCATACAGGAAATGCA+AGG | - | chr5_2:10328979-10328998 | None:intergenic | 40.0% | |
| GACGATGTAAGTTTGCATAC+AGG | - | chr5_2:10328989-10329008 | None:intergenic | 40.0% | |
| ! | TCGTCATGCATAGATTGGTT+TGG | + | chr5_2:10329004-10329023 | Msa0756250:intron | 40.0% |
| TGGTAGGAATATTCAAGGGT+AGG | + | chr5_2:10329107-10329126 | Msa0756250:intron | 40.0% | |
| ACACTGTAAACCTGCATTCA+TGG | + | chr5_2:10329223-10329242 | Msa0756250:intron | 40.0% | |
| GAGCAATTACAAATCGACTG+TGG | - | chr5_2:10329317-10329336 | None:intergenic | 40.0% | |
| TTGGCATCTCTGTTTACATC+AGG | + | chr5_2:10329396-10329415 | Msa0756250:intron | 40.0% | |
| TTCAAAAGCTCACGAAGTTG+TGG | - | chr5_2:10329503-10329522 | None:intergenic | 40.0% | |
| ! | TTGCTAGGTTGGAATTGAAC+TGG | + | chr5_2:10329708-10329727 | Msa0756250:intron | 40.0% |
| AGGTTGGAATTGAACTGGAA+AGG | + | chr5_2:10329713-10329732 | Msa0756250:intron | 40.0% | |
| AGGAAAATGACGTGCAACAA+GGG | - | chr5_2:10329803-10329822 | None:intergenic | 40.0% | |
| CAAGGGTCAGTGAAACAAAT+TGG | - | chr5_2:10329885-10329904 | None:intergenic | 40.0% | |
| ! | CCCTTGCTATGAAATGTTCT+AGG | + | chr5_2:10329899-10329918 | Msa0756250:intron | 40.0% |
| GCCTAGAACATTTCATAGCA+AGG | - | chr5_2:10329903-10329922 | None:intergenic | 40.0% | |
| AGAGACCATTCAGTGTACAA+AGG | + | chr5_2:10329926-10329945 | Msa0756250:CDS | 40.0% | |
| CAGATTTATGGGGTGCATTT+CGG | + | chr5_2:10329990-10330009 | Msa0756250:CDS | 40.0% | |
| AGATTTATGGGGTGCATTTC+GGG | + | chr5_2:10329991-10330010 | Msa0756250:CDS | 40.0% | |
| !! | TCAATAGTACTGGCAAGTGT+TGG | - | chr5_2:10330118-10330137 | None:intergenic | 40.0% |
| AACACTTGCCAGTACTATTG+AGG | + | chr5_2:10330117-10330136 | Msa0756250:CDS | 40.0% | |
| TACATGCTGTGGAGAAAATG+AGG | + | chr5_2:10330197-10330216 | Msa0756250:CDS | 40.0% | |
| ACATGCTGTGGAGAAAATGA+GGG | + | chr5_2:10330198-10330217 | Msa0756250:CDS | 40.0% | |
| GAGCTGATAAGCGTAAAATC+AGG | + | chr5_2:10330220-10330239 | Msa0756250:CDS | 40.0% | |
| AAGCGTAAAATCAGGAACAC+CGG | + | chr5_2:10330228-10330247 | Msa0756250:CDS | 40.0% | |
| ATTGAACATGGGGAACAATG+AGG | - | chr5_2:10330282-10330301 | None:intergenic | 40.0% | |
| TTTCCTCGGACATTCATTTC+TGG | + | chr5_2:10330398-10330417 | Msa0756250:intron | 40.0% | |
| ! | TTTTCAGTTTCAGGCAAGAG+GGG | - | chr5_2:10330584-10330603 | None:intergenic | 40.0% |
| !! | GGCAACGATTTTTCAGTTTC+AGG | - | chr5_2:10330593-10330612 | None:intergenic | 40.0% |
| AAGGTGAATGACTGTACCTT+TGG | + | chr5_2:10330877-10330896 | Msa0756250:three_prime_UTR | 40.0% | |
| ! | GTTTTCATGCTGAACGTGAG+GGG | - | chr5_2:10326699-10326718 | None:intergenic | 45.0% |
| ! | GGTTTTCATGCTGAACGTGA+GGG | - | chr5_2:10326700-10326719 | None:intergenic | 45.0% |
| ! | TTGAACTTTTGCTTCTGGCC+TGG | + | chr5_2:10327111-10327130 | Msa0756250:CDS | 45.0% |
| AAGCAGTCACATACGAACAC+CGG | + | chr5_2:10327178-10327197 | Msa0756250:intron | 45.0% | |
| ! | ACTTTTACCAGTGTCGTGTC+CGG | - | chr5_2:10327200-10327219 | None:intergenic | 45.0% |
| !! | GTTTCACATGTCGGTGTTGT+TGG | - | chr5_2:10327278-10327297 | None:intergenic | 45.0% |
| ATACCTGGAGAACGTGTTGT+TGG | + | chr5_2:10327881-10327900 | Msa0756250:intron | 45.0% | |
| !! | TGGTGCTCTAGGGTGTTATT+AGG | + | chr5_2:10328665-10328684 | Msa0756250:intron | 45.0% |
| TTCCCTCTGGCTATTAACCT+CGG | + | chr5_2:10328788-10328807 | Msa0756250:intron | 45.0% | |
| ! | GACCGTCTGCAAAAGTATAC+TGG | + | chr5_2:10328939-10328958 | Msa0756250:CDS | 45.0% |
| GTGGTTCTTAATCAGGTCTC+AGG | + | chr5_2:10329188-10329207 | Msa0756250:intron | 45.0% | |
| TCTGTTTACATCAGGCCTTG+TGG | + | chr5_2:10329404-10329423 | Msa0756250:intron | 45.0% | |
| AAGCAAGCAAATCCACCACA+AGG | - | chr5_2:10329422-10329441 | None:intergenic | 45.0% | |
| CGTTCATCTTCCAAAGGAAG+GGG | - | chr5_2:10329536-10329555 | None:intergenic | 45.0% | |
| GCGTTCATCTTCCAAAGGAA+GGG | - | chr5_2:10329537-10329556 | None:intergenic | 45.0% | |
| CTAACGCGTTCATCTTCCAA+AGG | - | chr5_2:10329542-10329561 | None:intergenic | 45.0% | |
| ! | CTTTGGAAGATGAACGCGTT+AGG | + | chr5_2:10329540-10329559 | Msa0756250:CDS | 45.0% |
| ACGCGTTAGGTTACTTCATG+AGG | + | chr5_2:10329553-10329572 | Msa0756250:CDS | 45.0% | |
| CAGGAAAATGACGTGCAACA+AGG | - | chr5_2:10329804-10329823 | None:intergenic | 45.0% | |
| !! | CTTGTTGCACGTCATTTTCC+TGG | + | chr5_2:10329802-10329821 | Msa0756250:CDS | 45.0% |
| GATTTATGGGGTGCATTTCG+GGG | + | chr5_2:10329992-10330011 | Msa0756250:CDS | 45.0% | |
| CTTTAAACTCGCCGTATCCA+TGG | - | chr5_2:10330018-10330037 | None:intergenic | 45.0% | |
| CATCAGCTCTCTGACCATAA+TGG | + | chr5_2:10330039-10330058 | Msa0756250:CDS | 45.0% | |
| CCAGTGGAGAAATATGTCCA+GGG | + | chr5_2:10330140-10330159 | Msa0756250:CDS | 45.0% | |
| AGAAATATGTCCAGGGACTG+AGG | + | chr5_2:10330147-10330166 | Msa0756250:CDS | 45.0% | |
| TGCTTGCTCTATACATGCTG+TGG | + | chr5_2:10330186-10330205 | Msa0756250:CDS | 45.0% | |
| CAACCAGAAATGAATGTCCG+AGG | - | chr5_2:10330404-10330423 | None:intergenic | 45.0% | |
| GACACAAGTTTGCATCTGCA+CGG | + | chr5_2:10330927-10330946 | Msa0756250:three_prime_UTR | 45.0% | |
| !!! | ACGTTTGCGTGTTTTGGGAC+AGG | - | chr5_2:10326671-10326690 | None:intergenic | 50.0% |
| ! | GGGTTTTCATGCTGAACGTG+AGG | - | chr5_2:10326701-10326720 | None:intergenic | 50.0% |
| AGGGTCAACAACGACATGAG+AGG | - | chr5_2:10326882-10326901 | None:intergenic | 50.0% | |
| CATGTCGTTGTTGACCCTTC+AGG | + | chr5_2:10326884-10326903 | Msa0756250:CDS | 50.0% | |
| ! | GTGTTGTTGGCGTCCAACAA+TGG | - | chr5_2:10327265-10327284 | None:intergenic | 50.0% |
| GTTCCAACAACACGTTCTCC+AGG | - | chr5_2:10327887-10327906 | None:intergenic | 50.0% | |
| TTGTTGGGTGTGGTGCTCTA+GGG | + | chr5_2:10328655-10328674 | Msa0756250:intron | 50.0% | |
| TGCCGAGGTTAATAGCCAGA+GGG | - | chr5_2:10328793-10328812 | None:intergenic | 50.0% | |
| ATGCCGAGGTTAATAGCCAG+AGG | - | chr5_2:10328794-10328813 | None:intergenic | 50.0% | |
| TTTGGCATCTGGGCTAAAGG+CGG | + | chr5_2:10328884-10328903 | Msa0756250:CDS | 50.0% | |
| GGGTAGGTAGTTAGATGCAG+AGG | + | chr5_2:10329123-10329142 | Msa0756250:intron | 50.0% | |
| ACTGGGCATACCATGAATGC+AGG | - | chr5_2:10329236-10329255 | None:intergenic | 50.0% | |
| ATTGCCTCAAGTGCTTGAGC+AGG | + | chr5_2:10329289-10329308 | Msa0756250:intron | 50.0% | |
| ! | GTTTACATCAGGCCTTGTGG+TGG | + | chr5_2:10329407-10329426 | Msa0756250:intron | 50.0% |
| TCTTCCAAAGGAAGGGGTCT+AGG | - | chr5_2:10329530-10329549 | None:intergenic | 50.0% | |
| CGCGTTCATCTTCCAAAGGA+AGG | - | chr5_2:10329538-10329557 | None:intergenic | 50.0% | |
| GACGGCCTTTGTACACTGAA+TGG | - | chr5_2:10329934-10329953 | None:intergenic | 50.0% | |
| ! | TCCACTGGCCTCAATAGTAC+TGG | - | chr5_2:10330128-10330147 | None:intergenic | 50.0% |
| GCCAGTGGAGAAATATGTCC+AGG | + | chr5_2:10330139-10330158 | Msa0756250:CDS | 50.0% | |
| CCCTGGACATATTTCTCCAC+TGG | - | chr5_2:10330143-10330162 | None:intergenic | 50.0% | |
| AATATGTCCAGGGACTGAGG+AGG | + | chr5_2:10330150-10330169 | Msa0756250:CDS | 50.0% | |
| GAACATGGGGAACAATGAGG+AGG | - | chr5_2:10330279-10330298 | None:intergenic | 50.0% | |
| ! | GTCATTTCAGGTGCTCAGTG+TGG | + | chr5_2:10330687-10330706 | Msa0756250:intron | 50.0% |
| TCAGTGTGGAGCTGGATCTT+TGG | + | chr5_2:10330701-10330720 | Msa0756250:CDS | 50.0% | |
| ! | TGGAGCTGGATCTTTGGCTT+TGG | + | chr5_2:10330707-10330726 | Msa0756250:CDS | 50.0% |
| !! | GGAGCTGGATCTTTGGCTTT+GGG | + | chr5_2:10330708-10330727 | Msa0756250:CDS | 50.0% |
| !! | GATCTTTGGCTTTGGGCAAC+TGG | + | chr5_2:10330715-10330734 | Msa0756250:CDS | 50.0% |
| !!! | GCGTGTTTTGGGACAGGAGT+AGG | - | chr5_2:10326665-10326684 | None:intergenic | 55.0% |
| ACGTTCGAGCTACCTCTGCT+TGG | + | chr5_2:10326843-10326862 | Msa0756250:CDS | 55.0% | |
| CGTTCGAGCTACCTCTGCTT+GGG | + | chr5_2:10326844-10326863 | Msa0756250:CDS | 55.0% | |
| GTTGTTGGGTGTGGTGCTCT+AGG | + | chr5_2:10328654-10328673 | Msa0756250:intron | 55.0% | |
| GGTTCCTGCTCAAGCACTTG+AGG | - | chr5_2:10329296-10329315 | None:intergenic | 55.0% | |
| TTGGCCTAGACCCCTTCCTT+TGG | + | chr5_2:10329523-10329542 | Msa0756250:CDS | 55.0% | |
| GCATTTCGGGGCCATGGATA+CGG | + | chr5_2:10330004-10330023 | Msa0756250:CDS | 55.0% | |
| GCCAGTACTATTGAGGCCAG+TGG | + | chr5_2:10330124-10330143 | Msa0756250:CDS | 55.0% | |
| TCAACTTCCTCCTCAGTCCC+TGG | - | chr5_2:10330160-10330179 | None:intergenic | 55.0% | |
| GTGACTAGCGACCCAAGCAG+AGG | - | chr5_2:10326858-10326877 | None:intergenic | 60.0% | |
| ACGAACACCGGACACGACAC+TGG | + | chr5_2:10327190-10327209 | Msa0756250:intron | 60.0% | |
| CCAAGCTGCTGAAGCACAGC+TGG | - | chr5_2:10330079-10330098 | None:intergenic | 60.0% | |
| CCAGCTGTGCTTCAGCAGCT+TGG | + | chr5_2:10330076-10330095 | Msa0756250:CDS | 60.0% | |
| TCAGGTGCTCAGTGTGGAGC+TGG | + | chr5_2:10330693-10330712 | Msa0756250:intron | 60.0% | |
| TGGGGTGCATTTCGGGGCCA+TGG | + | chr5_2:10329998-10330017 | Msa0756250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 10326653 | 10331022 | 10326653 | ID=Msa0756250;Name=Msa0756250 |
| chr5_2 | mRNA | 10326653 | 10331022 | 10326653 | ID=Msa0756250-mRNA-1;Parent=Msa0756250;Name=Msa0756250-mRNA-1;_AED=0.07;_eAED=0.07;_QI=183|1|1|1|1|1|7|233|305 |
| chr5_2 | exon | 10326653 | 10326905 | 10326653 | ID=Msa0756250-mRNA-1:exon:4727;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10326992 | 10327132 | 10326992 | ID=Msa0756250-mRNA-1:exon:4728;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10328862 | 10328960 | 10328862 | ID=Msa0756250-mRNA-1:exon:4729;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10329498 | 10329574 | 10329498 | ID=Msa0756250-mRNA-1:exon:4730;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10329715 | 10329823 | 10329715 | ID=Msa0756250-mRNA-1:exon:4731;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10329921 | 10330249 | 10329921 | ID=Msa0756250-mRNA-1:exon:4732;Parent=Msa0756250-mRNA-1 |
| chr5_2 | exon | 10330697 | 10331022 | 10330697 | ID=Msa0756250-mRNA-1:exon:4733;Parent=Msa0756250-mRNA-1 |
| chr5_2 | five_prime_UTR | 10326653 | 10326835 | 10326653 | ID=Msa0756250-mRNA-1:five_prime_utr;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10326836 | 10326905 | 10326836 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10326992 | 10327132 | 10326992 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10328862 | 10328960 | 10328862 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10329498 | 10329574 | 10329498 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10329715 | 10329823 | 10329715 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10329921 | 10330249 | 10329921 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | CDS | 10330697 | 10330789 | 10330697 | ID=Msa0756250-mRNA-1:cds;Parent=Msa0756250-mRNA-1 |
| chr5_2 | three_prime_UTR | 10330790 | 10331022 | 10330790 | ID=Msa0756250-mRNA-1:three_prime_utr;Parent=Msa0756250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
