AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0709780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709780 MtrunA17_Chr3g0141721 99.265 272 2 0 1 272 1 272 0.0 550
Msa0709780 MtrunA17_Chr1g0155361 83.955 268 42 1 1 267 1 268 6.73e-171 473
Msa0709780 MtrunA17_Chr5g0404561 71.852 270 74 2 1 269 1 269 1.98e-142 400
Msa0709780 MtrunA17_Chr8g0386291 40.415 193 111 2 42 230 57 249 3.94e-41 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709780 AT1G19580.1 80.297 269 52 1 1 268 1 269 1.71e-164 457
Msa0709780 AT1G47260.1 80.303 264 51 1 1 263 1 264 2.15e-163 454
Msa0709780 AT5G66510.1 67.176 262 77 3 1 261 1 254 3.75e-130 369
Msa0709780 AT5G66510.2 64.469 273 77 4 1 261 1 265 1.15e-126 361
Msa0709780 AT1G19580.2 80.447 179 34 1 1 178 1 179 9.34e-105 303
Msa0709780 AT5G63510.1 39.691 194 113 2 41 230 55 248 5.55e-42 144
Msa0709780 AT3G48680.1 38.660 194 115 2 41 230 59 252 6.14e-41 142
Msa0709780 AT5G63510.2 36.199 221 110 5 41 230 55 275 2.94e-36 130
Msa0709780 AT1G47420.1 55.814 86 24 2 1 85 1 73 4.83e-18 81.6

Find 101 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGAAGAGGGGTTTATTT+TGG 0.222500 5_1:-902229 Msa0709780:three_prime_UTR
TGTGTTCTCCACTTTGGGTT+AGG 0.238845 5_1:-902122 Msa0709780:three_prime_UTR
AAGTGTTGGCATTAGCAATT+AGG 0.272123 5_1:-908571 Msa0709780:five_prime_UTR
TTGGAAAAGGGTCATCAATT+TGG 0.284605 5_1:-908317 Msa0709780:CDS
AAGGTGTTGCCTACTATTAT+TGG 0.284723 5_1:-907404 Msa0709780:CDS
TATGTACCCCGGTGGCATTT+AGG 0.296682 5_1:-901920 None:intergenic
TTATCAGGTAAGACATTATC+AGG 0.301201 5_1:+902346 None:intergenic
AGGTGTTGCCTACTATTATT+GGG 0.302756 5_1:-907403 Msa0709780:CDS
CAAACTGTGTTCTCCACTTT+GGG 0.310111 5_1:-902127 Msa0709780:three_prime_UTR
GGAATTGATTGAAGAAGAAA+TGG 0.311067 5_1:-908550 Msa0709780:exon
GTGTTCTCCACTTTGGGTTA+GGG 0.313928 5_1:-902121 Msa0709780:three_prime_UTR
CTGTGCAAGGTTAGTATAAT+TGG 0.336529 5_1:+902507 None:intergenic
CTCAAACTCAATTTCTTCAT+AGG 0.337084 5_1:+902459 None:intergenic
CTCTATGTTGGGTGTTGTTC+GGG 0.337414 5_1:-902392 Msa0709780:CDS
TATGGCTCCTTTCAAGTTCC+AGG 0.340667 5_1:-902171 Msa0709780:three_prime_UTR
TTAAAATATGAGTTCTTAAG+AGG 0.347679 5_1:-902309 Msa0709780:exon
TATTATGAGCAATCGCTTCC+TGG 0.360470 5_1:+902153 None:intergenic
ATGTACCCCGGTGGCATTTA+GGG 0.367703 5_1:-901919 None:intergenic
GATGTTAACAGCATTAGAAT+TGG 0.385870 5_1:-907488 Msa0709780:CDS
GGACAGTTGATTCGGAAAAC+TGG 0.385950 5_1:-908498 Msa0709780:CDS
AAGACATCCTTATCAATAAC+AGG 0.391261 5_1:+908378 None:intergenic
TAGTATAATTGGTGGCTGAC+TGG 0.391398 5_1:+902518 None:intergenic
ACTCTATGTTGGGTGTTGTT+CGG 0.401232 5_1:-902393 Msa0709780:CDS
TGATGAGATTATTATTAAAA+CGG 0.403560 5_1:-901976 Msa0709780:three_prime_UTR
TCAAACTGTGTTCTCCACTT+TGG 0.403827 5_1:-902128 Msa0709780:three_prime_UTR
GGTGATGTTCAGATTGGAAA+AGG 0.410207 5_1:-908330 Msa0709780:CDS
CAAGGCTCCTGTTATTGATA+AGG 0.420602 5_1:-908385 Msa0709780:CDS
GATGAGATTATTATTAAAAC+GGG 0.438359 5_1:-901975 Msa0709780:three_prime_UTR
ATGGGTGCAATTCTGCTTGA+TGG 0.449196 5_1:-907218 Msa0709780:CDS
ACAGCGTTGGACAGTTGATT+CGG 0.455958 5_1:-908506 Msa0709780:CDS
ACATTATCCCCAATAATAGT+AGG 0.462118 5_1:+907395 None:intergenic
TTCTTTCAAATTCATGGAAG+AGG 0.464818 5_1:-902241 Msa0709780:three_prime_UTR
ACTCTAGCCTAGAAAACGTT+TGG 0.471680 5_1:+902194 None:intergenic
GTTGCAAAGTCAAATTTAAG+TGG 0.474043 5_1:-907428 Msa0709780:CDS
TTCCAATCTTGAAAACATCA+AGG 0.477826 5_1:-902274 Msa0709780:three_prime_UTR
CGCTGTATATTGCTCTTCCG+AGG 0.481527 5_1:+908523 None:intergenic
TGTTCTCCACTTTGGGTTAG+GGG 0.488974 5_1:-902120 Msa0709780:three_prime_UTR
AGTATAATTGGTGGCTGACT+GGG 0.491691 5_1:+902519 None:intergenic
GTCATTGGTGATGTTCAGAT+TGG 0.496337 5_1:-908336 Msa0709780:CDS
GCACCAAGTGCAGCTGTCAT+TGG 0.497004 5_1:-908351 Msa0709780:CDS
TCTTTCAAATTCATGGAAGA+GGG 0.500630 5_1:-902240 Msa0709780:three_prime_UTR
TTGACTTTGCAACATGCACC+AGG 0.501255 5_1:+907438 None:intergenic
CAGAATACAAAGATTCCATC+TGG 0.505231 5_1:-907146 Msa0709780:CDS
ACATCGAAGAACAGCTCTCT+AGG 0.510020 5_1:-908434 Msa0709780:CDS
CACCCACCCTAAATGCCACC+GGG 0.511292 5_1:+901913 None:intergenic
AGCTTTCTTAGAAACTTCGC+TGG 0.514816 5_1:+902568 None:intergenic
GAATTGATTGAAGAAGAAAT+GGG 0.516070 5_1:-908549 Msa0709780:exon
AAAGGGTCATCAATTTGGTA+TGG 0.518770 5_1:-908312 Msa0709780:CDS
AACAGCATTAGAATTGGAAG+TGG 0.524202 5_1:-907482 Msa0709780:CDS
GTTCTCCACTTTGGGTTAGG+GGG 0.528626 5_1:-902119 Msa0709780:three_prime_UTR
TCTTTGTATTCTGCCTCACA+AGG 0.530496 5_1:+907156 None:intergenic
CATCAGAGACTGAGAGGTCG+AGG 0.534656 5_1:+908618 None:intergenic
TCACCCACCCTAAATGCCAC+CGG 0.539298 5_1:+901912 None:intergenic
GATAAAAGCTATCTCTTCAT+CGG 0.540749 5_1:+902543 None:intergenic
AAAGTCAAATTTAAGTGGGA+AGG 0.542666 5_1:-907423 Msa0709780:CDS
TTTACATGGTTGCACTGTTG+AGG 0.545648 5_1:-907258 Msa0709780:CDS
CAGCTGCATGGACCTGTGCA+AGG 0.546560 5_1:+902494 None:intergenic
TGAGGAGTATGACTCTATGT+TGG 0.550229 5_1:-902404 Msa0709780:CDS
TCCAATCTTGAAAACATCAA+GGG 0.550631 5_1:-902273 Msa0709780:three_prime_UTR
TGGTTGCACTGTTGAGGATG+AGG 0.551311 5_1:-907252 Msa0709780:CDS
TTGCAAAGTCAAATTTAAGT+GGG 0.554283 5_1:-907427 Msa0709780:CDS
GTGATGTTCAGATTGGAAAA+GGG 0.560739 5_1:-908329 Msa0709780:CDS
GAAGAAGAAATGGGAACCCT+CGG 0.561046 5_1:-908540 Msa0709780:exon
ATCGCTTCCTGGAACTTGAA+AGG 0.562878 5_1:+902164 None:intergenic
TTGCTGCTGGAGCCCTTGTG+AGG 0.564784 5_1:-907169 Msa0709780:CDS
TCAGGAAGAATAAGCTCTGG+TGG 0.566098 5_1:+902364 None:intergenic
TCACCAATGACAGCTGCACT+TGG 0.572379 5_1:+908348 None:intergenic
TGGAAGTGGAACTAACCTAC+AGG 0.572989 5_1:-907468 Msa0709780:CDS
TGAAGAAATTGAGTTTGAGA+AGG 0.573566 5_1:-902455 Msa0709780:CDS
CGCCTCGGTTCTCATCTCCA+AGG 0.576532 5_1:-908462 Msa0709780:CDS
GTTCTTCGATGTAGCCACCT+TGG 0.576656 5_1:+908445 None:intergenic
CTGAGAGGTCGAGGTAGACG+TGG 0.577266 5_1:+908627 None:intergenic
CTTTCAAATTCATGGAAGAG+GGG 0.577553 5_1:-902239 Msa0709780:three_prime_UTR
ATTAGACATACCTCGCCAGA+TGG 0.581701 5_1:+907131 None:intergenic
GAGGAGTATGACTCTATGTT+GGG 0.583365 5_1:-902403 Msa0709780:CDS
GGTCAAGCCGTTGATCGCCT+CGG 0.584423 5_1:-908477 Msa0709780:CDS
GCTGTATATTGCTCTTCCGA+GGG 0.586697 5_1:+908524 None:intergenic
TTATCAGGAAGAATAAGCTC+TGG 0.587187 5_1:+902361 None:intergenic
ATTGGGGATAATGTTACCGT+AGG 0.589866 5_1:-907386 Msa0709780:intron
ATGAGAACCGAGGCGATCAA+CGG 0.590186 5_1:+908470 None:intergenic
TTGAGTGTGGATATGTACCC+CGG 0.592255 5_1:-901931 Msa0709780:three_prime_UTR
TGGTATGGATCTGTATTGAG+AGG 0.599692 5_1:-908297 Msa0709780:intron
GAAGTATGCAACTAAAGATG+AGG 0.603345 5_1:-902422 Msa0709780:CDS
CAATTATACTAACCTTGCAC+AGG 0.606999 5_1:-902506 Msa0709780:CDS
GGAAGAGCAATATACAGCGT+TGG 0.610305 5_1:-908519 Msa0709780:CDS
TAACCTACAGGATAACTCCC+TGG 0.618045 5_1:-907456 Msa0709780:CDS
TACCCTCCTCTGAATGAAAG+GGG 0.626071 5_1:-908660 None:intergenic
TGCAAGGTTAGTATAATTGG+TGG 0.628820 5_1:+902510 None:intergenic
CCAATCTTGAAAACATCAAG+GGG 0.630148 5_1:-902272 Msa0709780:three_prime_UTR
TACAAAGATTCCATCTGGCG+AGG 0.640116 5_1:-907141 Msa0709780:intron
GGTGTTGCCTACTATTATTG+GGG 0.645236 5_1:-907402 Msa0709780:CDS
CTTGAGCATCAGAGACTGAG+AGG 0.647116 5_1:+908612 None:intergenic
CTCGGTTCTCATCTCCAAGG+TGG 0.666923 5_1:-908459 Msa0709780:CDS
CTTTGTATTCTGCCTCACAA+GGG 0.673013 5_1:+907157 None:intergenic
TATCTTGAACATATTTGACA+AGG 0.679511 5_1:-908403 Msa0709780:CDS
TGACTTTGCAACATGCACCA+GGG 0.689090 5_1:+907439 None:intergenic
CACCTTGGAGATGAGAACCG+AGG 0.703858 5_1:+908460 None:intergenic
GCACCAGGGAGTTATCCTGT+AGG 0.704606 5_1:+907453 None:intergenic
ATGAGATTATTATTAAAACG+GGG 0.719211 5_1:-901974 Msa0709780:three_prime_UTR
ACCCACCCTAAATGCCACCG+GGG 0.752695 5_1:+901914 None:intergenic
AGTGTGGATATGTACCCCGG+TGG 0.809671 5_1:-901928 Msa0709780:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACCAAATTTAAAAAAAA+GGG + chr5_1:902574-902593 None:intergenic 10.0%
!! TATTACCAAATTTAAAAAAA+AGG + chr5_1:902575-902594 None:intergenic 10.0%
!!! AATTTTAAGAAAAAAAACAA+CGG + chr5_1:904198-904217 None:intergenic 10.0%
!! TATAAAAATTCAAATGATAA+AGG - chr5_1:905736-905755 Msa0709780:intron 10.0%
!! TTTAACAAAATTAAAAATAG+GGG - chr5_1:906829-906848 Msa0709780:intron 10.0%
!! GATATGAATTTCTAAATATT+TGG - chr5_1:902316-902335 Msa0709780:exon 15.0%
!!! ATTACCCTTTTTTTTAAATT+TGG - chr5_1:902567-902586 Msa0709780:CDS 15.0%
!! TATATGAAAATATGTGTTAT+AGG - chr5_1:902690-902709 Msa0709780:intron 15.0%
!!! TTTATTCTATCTTTTGTTAT+AGG - chr5_1:902762-902781 Msa0709780:intron 15.0%
!!! TAGTTACTTAAGATAATTTT+AGG - chr5_1:904047-904066 Msa0709780:intron 15.0%
!!! AAATCTCTCATTTTAAAATT+GGG + chr5_1:904491-904510 None:intergenic 15.0%
!!! AAAATCTCTCATTTTAAAAT+TGG + chr5_1:904492-904511 None:intergenic 15.0%
!! AAGCCTAAATTTATTATTAT+AGG - chr5_1:905547-905566 Msa0709780:intron 15.0%
!! TGTCCTATAATAATAAATTT+AGG + chr5_1:905553-905572 None:intergenic 15.0%
!! TATATATTATATTAAAGCCA+TGG + chr5_1:905578-905597 None:intergenic 15.0%
!!! TATTATTTTATAATGGTTGT+TGG - chr5_1:905693-905712 Msa0709780:intron 15.0%
!!! ATTATTTTATAATGGTTGTT+GGG - chr5_1:905694-905713 Msa0709780:intron 15.0%
!! AAATAAAAAGAAAGATACAA+AGG + chr5_1:906210-906229 None:intergenic 15.0%
!! AGTTAACAAAATTGAAAATA+GGG + chr5_1:906357-906376 None:intergenic 15.0%
!! AAGTTAACAAAATTGAAAAT+AGG + chr5_1:906358-906377 None:intergenic 15.0%
!!! AAAAGTCAAAGAAATTTTTT+TGG - chr5_1:906423-906442 Msa0709780:intron 15.0%
!!! ATATTTTTAAATTAATGGCA+TGG + chr5_1:906542-906561 None:intergenic 15.0%
!! TTAACAAAATTAAAAATAGG+GGG - chr5_1:906830-906849 Msa0709780:intron 15.0%
!!! TTTTTTTTCTTTCAAATTCA+TGG - chr5_1:908319-908338 Msa0709780:CDS 15.0%
!! TGATGAGATTATTATTAAAA+CGG - chr5_1:908590-908609 Msa0709780:five_prime_UTR 15.0%
!! AATCAAATAATTGGTATGTT+TGG - chr5_1:902362-902381 Msa0709780:CDS 20.0%
!!! AGTATAAGTGTATTTTCATA+AGG + chr5_1:902501-902520 None:intergenic 20.0%
!! TAAACACATGATAATTTGAA+AGG + chr5_1:902548-902567 None:intergenic 20.0%
!! TGTTATAGGATCTTATAATT+AGG - chr5_1:902704-902723 Msa0709780:intron 20.0%
!! GTTATAGGATCTTATAATTA+GGG - chr5_1:902705-902724 Msa0709780:intron 20.0%
!!! ATTTTGAAACAATGTTTTCA+TGG - chr5_1:902928-902947 Msa0709780:intron 20.0%
!!! TTTTGAAACAATGTTTTCAT+GGG - chr5_1:902929-902948 Msa0709780:intron 20.0%
!! CTATACTTAATAATTACATG+CGG - chr5_1:903014-903033 Msa0709780:intron 20.0%
!!! ATTCTGTTTTGTATAGTTTA+TGG - chr5_1:903943-903962 Msa0709780:intron 20.0%
!!! TTAGTTACTTAGATAGTTTT+AGG - chr5_1:903998-904017 Msa0709780:intron 20.0%
!! AAAAATATAAGAAGATTGTC+GGG + chr5_1:904139-904158 None:intergenic 20.0%
!! CAAAAATATAAGAAGATTGT+CGG + chr5_1:904140-904159 None:intergenic 20.0%
!! AATTTATCATATCTCTAAGT+TGG + chr5_1:904415-904434 None:intergenic 20.0%
!!! AATCTCTCATTTTAAAATTG+GGG + chr5_1:904490-904509 None:intergenic 20.0%
!!! TAGAAACTTTGAAAATAAGT+GGG + chr5_1:904998-905017 None:intergenic 20.0%
!! TAGCATAAAAAGAAAAATTG+AGG + chr5_1:905134-905153 None:intergenic 20.0%
!!! TTAAATGTTAATTTTCACGT+TGG - chr5_1:905320-905339 Msa0709780:intron 20.0%
!!! GAAGTGCTATTATTTTATAA+TGG - chr5_1:905686-905705 Msa0709780:intron 20.0%
!!! TTATTTTATAATGGTTGTTG+GGG - chr5_1:905695-905714 Msa0709780:intron 20.0%
!! CAAATGATAAAGGTAAAATA+TGG - chr5_1:905746-905765 Msa0709780:intron 20.0%
!! TGGAAAAGATCTAATAAATA+TGG - chr5_1:905989-906008 Msa0709780:intron 20.0%
!! TTAACAAAATTGAAAATAGG+GGG + chr5_1:906355-906374 None:intergenic 20.0%
!! GTTAACAAAATTGAAAATAG+GGG + chr5_1:906356-906375 None:intergenic 20.0%
!!! AAAGTTGGTTTTAGAAATAT+GGG + chr5_1:906387-906406 None:intergenic 20.0%
!!! AAAAGTTGGTTTTAGAAATA+TGG + chr5_1:906388-906407 None:intergenic 20.0%
!!! TATTTCTAAAACCAACTTTT+TGG - chr5_1:906388-906407 Msa0709780:intron 20.0%
!!! TCTTTGACTTTTTAAATAGA+GGG + chr5_1:906415-906434 None:intergenic 20.0%
!!! TTCTTTGACTTTTTAAATAG+AGG + chr5_1:906416-906435 None:intergenic 20.0%
!!! GACTTTTTGTTTTAAACATA+AGG + chr5_1:906874-906893 None:intergenic 20.0%
!! AAAGCTATATTATGTACTAT+TGG - chr5_1:907795-907814 Msa0709780:intron 20.0%
!!! TTTTTTTTTTTTGTTGGTCT+AGG - chr5_1:907860-907879 Msa0709780:intron 20.0%
!! TTAAAATATGAGTTCTTAAG+AGG - chr5_1:908257-908276 Msa0709780:intron 20.0%
!! GATGAGATTATTATTAAAAC+GGG - chr5_1:908591-908610 Msa0709780:five_prime_UTR 20.0%
!! ATGAGATTATTATTAAAACG+GGG - chr5_1:908592-908611 Msa0709780:five_prime_UTR 20.0%
! GAATTGATTGAAGAAGAAAT+GGG - chr5_1:902017-902036 Msa0709780:three_prime_UTR 25.0%
! TATCTTGAACATATTTGACA+AGG - chr5_1:902163-902182 Msa0709780:three_prime_UTR 25.0%
!! TGCTTTTGCAATCAAATAAT+TGG - chr5_1:902353-902372 Msa0709780:CDS 25.0%
!! TGAAAGGAGTCTTATAATTA+GGG + chr5_1:902532-902551 None:intergenic 25.0%
!! TTGAAAGGAGTCTTATAATT+AGG + chr5_1:902533-902552 None:intergenic 25.0%
! CATATTTGAACTTGACATTA+TGG - chr5_1:903049-903068 Msa0709780:intron 25.0%
! TTGCAAAGTCAAATTTAAGT+GGG - chr5_1:903139-903158 Msa0709780:intron 25.0%
! TAAGAATAAGCTTGCAAAAT+AGG - chr5_1:903796-903815 Msa0709780:intron 25.0%
! TTTATGTTGCAGAAAATTCT+TGG + chr5_1:904166-904185 None:intergenic 25.0%
!!! ACAGTAAACAAAATTTGTTG+TGG + chr5_1:904321-904340 None:intergenic 25.0%
!! TGTCATATCTGTATTTTCTA+GGG + chr5_1:904373-904392 None:intergenic 25.0%
!! TTTAGACTTAATTGCACTTT+TGG - chr5_1:904434-904453 Msa0709780:intron 25.0%
!! TTAGACTTAATTGCACTTTT+GGG - chr5_1:904435-904454 Msa0709780:intron 25.0%
! TTAAATGTTAATTCCCATGT+TGG + chr5_1:904622-904641 None:intergenic 25.0%
! TAAAATTAGAAGGGTAAGAA+GGG + chr5_1:904710-904729 None:intergenic 25.0%
! GAAAAATAACACTAGAATGT+GGG + chr5_1:904802-904821 None:intergenic 25.0%
! AGAAAAATAACACTAGAATG+TGG + chr5_1:904803-904822 None:intergenic 25.0%
!! CTAGAAACTTTGAAAATAAG+TGG + chr5_1:904999-905018 None:intergenic 25.0%
!! TTCTAGTAGTATTTTGTTAG+AGG - chr5_1:905013-905032 Msa0709780:intron 25.0%
! CAATTCATTTGAATTTGCAT+CGG - chr5_1:905101-905120 Msa0709780:intron 25.0%
! GAAGCATAGAAAATTCAAAA+CGG + chr5_1:905844-905863 None:intergenic 25.0%
! GATTTGGATCTATTTAAGAA+AGG + chr5_1:905882-905901 None:intergenic 25.0%
!!! GATTTCTATGTTTTTTCTGT+TGG - chr5_1:905969-905988 Msa0709780:intron 25.0%
! AAAGGGATAAAATCTTTCAA+GGG + chr5_1:906098-906117 None:intergenic 25.0%
!! TTGAAAGATTTTATCCCTTT+GGG - chr5_1:906098-906117 Msa0709780:intron 25.0%
! AGTTTATAGATGACAACTAA+GGG - chr5_1:906253-906272 Msa0709780:intron 25.0%
!!! TATTTCTAGAACCAACATTT+TGG + chr5_1:906797-906816 None:intergenic 25.0%
!!! AAAATGTTGGTTCTAGAAAT+AGG - chr5_1:906796-906815 Msa0709780:intron 25.0%
!!! AAATGTTGGTTCTAGAAATA+GGG - chr5_1:906797-906816 Msa0709780:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr5_1:907152-907171 Msa0709780:CDS 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr5_1:907192-907211 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr5_1:907199-907218 Msa0709780:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr5_1:907334-907353 None:intergenic 25.0%
! TTAACCTTCTATAACAGTAT+TGG - chr5_1:907669-907688 Msa0709780:intron 25.0%
! AAATCCAATACTGTTATAGA+AGG + chr5_1:907676-907695 None:intergenic 25.0%
!! CGATTTTATTGTCAATTATG+AGG - chr5_1:907716-907735 Msa0709780:intron 25.0%
! AACATTAGAACTTTACTATC+TGG + chr5_1:907893-907912 None:intergenic 25.0%
!! GTAAAGTTCTAATGTTTGTT+TGG - chr5_1:907897-907916 Msa0709780:intron 25.0%
! AAACAAACCTGAAAAAGTGT+TGG - chr5_1:901981-902000 Msa0709780:three_prime_UTR 30.0%
GGAATTGATTGAAGAAGAAA+TGG - chr5_1:902016-902035 Msa0709780:three_prime_UTR 30.0%
AAGACATCCTTATCAATAAC+AGG + chr5_1:902191-902210 None:intergenic 30.0%
! CTAGAGAGCATATAGAAATA+AGG + chr5_1:902474-902493 None:intergenic 30.0%
!! CTTATTTCTATATGCTCTCT+AGG - chr5_1:902472-902491 Msa0709780:CDS 30.0%
TAGGATCTTATAATTAGGGA+CGG - chr5_1:902709-902728 Msa0709780:intron 30.0%
TCAAGTTCAAATATGATTGC+CGG + chr5_1:903044-903063 None:intergenic 30.0%
TTGAACTTGACATTATGGAT+AGG - chr5_1:903054-903073 Msa0709780:intron 30.0%
GATGTTAACAGCATTAGAAT+TGG - chr5_1:903078-903097 Msa0709780:intron 30.0%
GTTGCAAAGTCAAATTTAAG+TGG - chr5_1:903138-903157 Msa0709780:intron 30.0%
AAAGTCAAATTTAAGTGGGA+AGG - chr5_1:903143-903162 Msa0709780:intron 30.0%
ACATTATCCCCAATAATAGT+AGG + chr5_1:903174-903193 None:intergenic 30.0%
TGTATAAAATTTCACTGAGC+AGG - chr5_1:903273-903292 Msa0709780:intron 30.0%
CAATCCTAAATCTCATTAAG+TGG + chr5_1:903482-903501 None:intergenic 30.0%
! ATGAGATTTAGGATTGTGTA+CGG - chr5_1:903486-903505 Msa0709780:intron 30.0%
! CTTCTATTCTTTGATAACTC+CGG + chr5_1:903580-903599 None:intergenic 30.0%
TAGCAACTATAAGACAGAAT+AGG + chr5_1:904230-904249 None:intergenic 30.0%
! GTCATATCTGTATTTTCTAG+GGG + chr5_1:904372-904391 None:intergenic 30.0%
! CTGTCATATCTGTATTTTCT+AGG + chr5_1:904374-904393 None:intergenic 30.0%
GTAAAATTAGAAGGGTAAGA+AGG + chr5_1:904711-904730 None:intergenic 30.0%
TCCATTGGGTAAAATTAGAA+GGG + chr5_1:904719-904738 None:intergenic 30.0%
TTCCATTGGGTAAAATTAGA+AGG + chr5_1:904720-904739 None:intergenic 30.0%
! TTTTCTGTCAACATACTCAT+TGG - chr5_1:904817-904836 Msa0709780:intron 30.0%
CGATGCAAATTCAAATGAAT+TGG + chr5_1:905103-905122 None:intergenic 30.0%
! TAACTAAATCGCTATTGACT+TGG - chr5_1:905152-905171 Msa0709780:intron 30.0%
!! AACTAAATCGCTATTGACTT+GGG - chr5_1:905153-905172 Msa0709780:intron 30.0%
TGAAATTAGAAGGGTAAGAA+GGG - chr5_1:905216-905235 Msa0709780:intron 30.0%
!!! TTTTTTGGTCAAAATGTGCA+TGG - chr5_1:905381-905400 Msa0709780:intron 30.0%
!! TTTTTGGTCAAAATGTGCAT+GGG - chr5_1:905382-905401 Msa0709780:intron 30.0%
! AAAACCGCTCATTTTAAACT+TGG - chr5_1:905441-905460 Msa0709780:intron 30.0%
!!! GTTTTAGAATTGTGCGATTT+TGG + chr5_1:905470-905489 None:intergenic 30.0%
!! AATCGCACAATTCTAAAACT+TGG - chr5_1:905471-905490 Msa0709780:intron 30.0%
!! ATCGCACAATTCTAAAACTT+GGG - chr5_1:905472-905491 Msa0709780:intron 30.0%
AATCGCACAAATGTTAAACT+TGG - chr5_1:905506-905525 Msa0709780:intron 30.0%
ATCGCACAAATGTTAAACTT+GGG - chr5_1:905507-905526 Msa0709780:intron 30.0%
TATTATTATAGGACATGCCA+TGG - chr5_1:905558-905577 Msa0709780:intron 30.0%
AGAAAGGTGAAGATTTAACA+AGG + chr5_1:905866-905885 None:intergenic 30.0%
TCTTAAATAGATCCAAATCC+AGG - chr5_1:905883-905902 Msa0709780:intron 30.0%
ATGGATGATGATCTTTATCA+AGG - chr5_1:906028-906047 Msa0709780:intron 30.0%
CAAAGGGATAAAATCTTTCA+AGG + chr5_1:906099-906118 None:intergenic 30.0%
! CTTGAAAGATTTTATCCCTT+TGG - chr5_1:906097-906116 Msa0709780:intron 30.0%
TTGTCAGAAAAAAACCCAAA+GGG + chr5_1:906115-906134 None:intergenic 30.0%
! TTCTGACAAGGTTTTTAATG+AGG - chr5_1:906126-906145 Msa0709780:intron 30.0%
CAGTTTATAGATGACAACTA+AGG - chr5_1:906252-906271 Msa0709780:intron 30.0%
GTTTATAGATGACAACTAAG+GGG - chr5_1:906254-906273 Msa0709780:intron 30.0%
TTAATGATATGAATCCTACG+TGG - chr5_1:906479-906498 Msa0709780:intron 30.0%
! AAAAAGTCAGCGGAAATTTT+TGG + chr5_1:906764-906783 None:intergenic 30.0%
!!! TTTCCGCTGACTTTTTAAAT+AGG - chr5_1:906768-906787 Msa0709780:intron 30.0%
!!! TTCCGCTGACTTTTTAAATA+GGG - chr5_1:906769-906788 Msa0709780:intron 30.0%
!! AATGTTGGTTCTAGAAATAG+GGG - chr5_1:906798-906817 Msa0709780:intron 30.0%
TGTTGTTGTACTGTTATAGA+AGG + chr5_1:907073-907092 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr5_1:907148-907167 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr5_1:907187-907206 Msa0709780:CDS 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr5_1:907209-907228 Msa0709780:CDS 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + chr5_1:907267-907286 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG - chr5_1:907268-907287 Msa0709780:CDS 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr5_1:907338-907357 Msa0709780:intron 30.0%
AATTCCATGACAACATTCAA+AGG + chr5_1:907746-907765 None:intergenic 30.0%
TTGTCATGGAATTTATCACA+TGG - chr5_1:907753-907772 Msa0709780:intron 30.0%
!! ATAGCTTTAGTCTAGCAATT+GGG + chr5_1:907783-907802 None:intergenic 30.0%
!! TATAGCTTTAGTCTAGCAAT+TGG + chr5_1:907784-907803 None:intergenic 30.0%
! TGTAAACTTGCATATTTTGC+AGG - chr5_1:907961-907980 Msa0709780:intron 30.0%
GATAAAAGCTATCTCTTCAT+CGG + chr5_1:908026-908045 None:intergenic 30.0%
CTCAAACTCAATTTCTTCAT+AGG + chr5_1:908110-908129 None:intergenic 30.0%
TGAAGAAATTGAGTTTGAGA+AGG - chr5_1:908111-908130 Msa0709780:intron 30.0%
TTATCAGGTAAGACATTATC+AGG + chr5_1:908223-908242 None:intergenic 30.0%
!!! AGAGCTTTTTTTGCTTTATC+AGG + chr5_1:908238-908257 None:intergenic 30.0%
TTCCAATCTTGAAAACATCA+AGG - chr5_1:908292-908311 Msa0709780:intron 30.0%
TCCAATCTTGAAAACATCAA+GGG - chr5_1:908293-908312 Msa0709780:intron 30.0%
TTCTTTCAAATTCATGGAAG+AGG - chr5_1:908325-908344 Msa0709780:CDS 30.0%
TCTTTCAAATTCATGGAAGA+GGG - chr5_1:908326-908345 Msa0709780:CDS 30.0%
! AATAACACCAAACGTTTTCT+AGG - chr5_1:908365-908384 Msa0709780:CDS 30.0%
!! AAGTGTTGGCATTAGCAATT+AGG - chr5_1:901995-902014 Msa0709780:three_prime_UTR 35.0%
GTGATGTTCAGATTGGAAAA+GGG - chr5_1:902237-902256 Msa0709780:three_prime_UTR 35.0%
TTGGAAAAGGGTCATCAATT+TGG - chr5_1:902249-902268 Msa0709780:three_prime_UTR 35.0%
AAAGGGTCATCAATTTGGTA+TGG - chr5_1:902254-902273 Msa0709780:three_prime_UTR 35.0%
! CAGGGTCTTATAAATAAGGA+CGG - chr5_1:902663-902682 Msa0709780:intron 35.0%
AATAATTACATGCGGCAAAC+CGG - chr5_1:903022-903041 Msa0709780:intron 35.0%
AACAGCATTAGAATTGGAAG+TGG - chr5_1:903084-903103 Msa0709780:intron 35.0%
!! AAGGTGTTGCCTACTATTAT+TGG - chr5_1:903162-903181 Msa0709780:intron 35.0%
! AGGTGTTGCCTACTATTATT+GGG - chr5_1:903163-903182 Msa0709780:intron 35.0%
AATTGTTGATCGTGGCAAAA+AGG + chr5_1:903213-903232 None:intergenic 35.0%
ATGTAGCAAATTGTTGATCG+TGG + chr5_1:903221-903240 None:intergenic 35.0%
CAGAATACAAAGATTCCATC+TGG - chr5_1:903420-903439 Msa0709780:intron 35.0%
TAATTTGGCTGTAAACTGTC+TGG - chr5_1:903454-903473 Msa0709780:intron 35.0%
GGTACCACTTAATGAGATTT+AGG - chr5_1:903475-903494 Msa0709780:intron 35.0%
AGAAAGAAAGCAGATAGAGA+TGG - chr5_1:903604-903623 Msa0709780:intron 35.0%
TACGAGATAGAGAATGATGA+TGG - chr5_1:903656-903675 Msa0709780:intron 35.0%
ACGAGATAGAGAATGATGAT+GGG - chr5_1:903657-903676 Msa0709780:intron 35.0%
AACTGTTTGACAGTTGTGAA+AGG + chr5_1:903721-903740 None:intergenic 35.0%
TTGCAAGCTTATTCTTACGA+GGG + chr5_1:903793-903812 None:intergenic 35.0%
TTTGCAAGCTTATTCTTACG+AGG + chr5_1:903794-903813 None:intergenic 35.0%
GAATAAGCTTGCAAAATAGG+AGG - chr5_1:903799-903818 Msa0709780:intron 35.0%
AGACTAACATGTACAGTGTT+AGG + chr5_1:903846-903865 None:intergenic 35.0%
!! ACAAAATTTGTTGTGGCTGT+AGG + chr5_1:904314-904333 None:intergenic 35.0%
ATCGCACAATTGTGAAACTT+GGG + chr5_1:904463-904482 None:intergenic 35.0%
AATCGCACAATTGTGAAACT+TGG + chr5_1:904464-904483 None:intergenic 35.0%
AGTTTCACAATTGTGCGATT+TGG - chr5_1:904464-904483 Msa0709780:intron 35.0%
TTATTTGGTCAAAATGCGCA+TGG + chr5_1:904554-904573 None:intergenic 35.0%
! ACCCTTCTAATTTTACCCAA+TGG - chr5_1:904715-904734 Msa0709780:intron 35.0%
TTGCACACGGTGTAAATTTA+AGG + chr5_1:904927-904946 None:intergenic 35.0%
AACAAGTGAAAACTTGCACA+CGG + chr5_1:904940-904959 None:intergenic 35.0%
GTGAAATTAGAAGGGTAAGA+AGG - chr5_1:905215-905234 Msa0709780:intron 35.0%
TTTAATGATGTGCATCTCCA+TGG + chr5_1:905346-905365 None:intergenic 35.0%
! TTTTGGTCAAAATGTGCATG+GGG - chr5_1:905383-905402 Msa0709780:intron 35.0%
! TGGGGATTAGTAAATGCAAA+AGG - chr5_1:905401-905420 Msa0709780:intron 35.0%
! GGGGATTAGTAAATGCAAAA+GGG - chr5_1:905402-905421 Msa0709780:intron 35.0%
! GGGATTAGTAAATGCAAAAG+GGG - chr5_1:905403-905422 Msa0709780:intron 35.0%
!! TCGCACAATTCTAAAACTTG+GGG - chr5_1:905473-905492 Msa0709780:intron 35.0%
TCGCACAAATGTTAAACTTG+GGG - chr5_1:905508-905527 Msa0709780:intron 35.0%
! TGGGGTATTCTCATCTATTT+AGG - chr5_1:905713-905732 Msa0709780:intron 35.0%
ACAACAGAAACAACAAGGAA+GGG + chr5_1:906057-906076 None:intergenic 35.0%
AACAACAGAAACAACAAGGA+AGG + chr5_1:906058-906077 None:intergenic 35.0%
AGCAAACAACAGAAACAACA+AGG + chr5_1:906062-906081 None:intergenic 35.0%
CTTGTCAGAAAAAAACCCAA+AGG + chr5_1:906116-906135 None:intergenic 35.0%
!!! CTTTGGGTTTTTTTCTGACA+AGG - chr5_1:906114-906133 Msa0709780:intron 35.0%
!! AAAGATACAAAGGCACTTGA+GGG + chr5_1:906200-906219 None:intergenic 35.0%
! CTAAACATAAAAGAGTGCAG+AGG + chr5_1:906312-906331 None:intergenic 35.0%
! CTCTGCACTCTTTTATGTTT+AGG - chr5_1:906310-906329 Msa0709780:intron 35.0%
AAATAGAGGGACCAAAAAGT+TGG + chr5_1:906402-906421 None:intergenic 35.0%
ATGATGGTACCATATTAGCA+AGG + chr5_1:906505-906524 None:intergenic 35.0%
AAATTAATGGCATGGAAACG+AGG + chr5_1:906534-906553 None:intergenic 35.0%
ACAAATGAAGAACCCTAACT+TGG - chr5_1:906620-906639 Msa0709780:intron 35.0%
ATTACCACGTCATCAATTTG+GGG + chr5_1:906652-906671 None:intergenic 35.0%
CATTACCACGTCATCAATTT+GGG + chr5_1:906653-906672 None:intergenic 35.0%
TCATTACCACGTCATCAATT+TGG + chr5_1:906654-906673 None:intergenic 35.0%
!! AAATTGATGACGTGGTAATG+AGG - chr5_1:906653-906672 Msa0709780:intron 35.0%
!!! TCCGCTGACTTTTTAAATAG+GGG - chr5_1:906770-906789 Msa0709780:intron 35.0%
TCCCCTATTTAAAAAGTCAG+CGG + chr5_1:906774-906793 None:intergenic 35.0%
TAAATAGGGGACCAAAATGT+TGG - chr5_1:906783-906802 Msa0709780:intron 35.0%
ATGACTTATTGATCCAATGG+TGG + chr5_1:906929-906948 None:intergenic 35.0%
GGTATGACTTATTGATCCAA+TGG + chr5_1:906932-906951 None:intergenic 35.0%
TTGGATCAATAAGTCATACC+TGG - chr5_1:906932-906951 Msa0709780:intron 35.0%
!! GATGTGACTTGTTGATTCAA+CGG - chr5_1:906969-906988 Msa0709780:intron 35.0%
GTAGAAAACAAACTTGTGCA+TGG - chr5_1:906991-907010 Msa0709780:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr5_1:907168-907187 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr5_1:907180-907199 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr5_1:907264-907283 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr5_1:907320-907339 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr5_1:907325-907344 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr5_1:907345-907364 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + chr5_1:907532-907551 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - chr5_1:907536-907555 Msa0709780:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG + chr5_1:907545-907564 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG + chr5_1:907610-907629 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - chr5_1:907643-907662 Msa0709780:intron 35.0%
AGAGCCATAGTACAAAATGA+CGG + chr5_1:907650-907669 None:intergenic 35.0%
CATGGAATTTATCACATGGT+TGG - chr5_1:907757-907776 Msa0709780:intron 35.0%
TTAGAACTTTACTATCTGGC+TGG + chr5_1:907889-907908 None:intergenic 35.0%
!! CTTTTCTTGAGTACTTGCTA+CGG - chr5_1:907923-907942 Msa0709780:intron 35.0%
! ACTTGCATATTTTGCAGGTT+TGG - chr5_1:907966-907985 Msa0709780:intron 35.0%
! CTTGCATATTTTGCAGGTTT+GGG - chr5_1:907967-907986 Msa0709780:intron 35.0%
TGCAAGGTTAGTATAATTGG+TGG + chr5_1:908059-908078 None:intergenic 35.0%
CTGTGCAAGGTTAGTATAAT+TGG + chr5_1:908062-908081 None:intergenic 35.0%
CAATTATACTAACCTTGCAC+AGG - chr5_1:908060-908079 Msa0709780:intron 35.0%
! ACTTTGAATTTTCAGCTGCA+TGG + chr5_1:908087-908106 None:intergenic 35.0%
GAAGTATGCAACTAAAGATG+AGG - chr5_1:908144-908163 Msa0709780:intron 35.0%
TTATCAGGAAGAATAAGCTC+TGG + chr5_1:908208-908227 None:intergenic 35.0%
CCAATCTTGAAAACATCAAG+GGG - chr5_1:908294-908313 Msa0709780:intron 35.0%
CTTTCAAATTCATGGAAGAG+GGG - chr5_1:908327-908346 Msa0709780:CDS 35.0%
ATCCACACTCAACAAAAACA+CGG + chr5_1:908627-908646 None:intergenic 35.0%
!!! GCTAATGCCAACACTTTTTC+AGG + chr5_1:901991-902010 None:intergenic 40.0%
CAAGGCTCCTGTTATTGATA+AGG - chr5_1:902181-902200 Msa0709780:three_prime_UTR 40.0%
!! GTCATTGGTGATGTTCAGAT+TGG - chr5_1:902230-902249 Msa0709780:three_prime_UTR 40.0%
GGTGATGTTCAGATTGGAAA+AGG - chr5_1:902236-902255 Msa0709780:three_prime_UTR 40.0%
TGGTATGGATCTGTATTGAG+AGG - chr5_1:902269-902288 Msa0709780:three_prime_UTR 40.0%
TGGATCTGTATTGAGAGGTA+AGG - chr5_1:902274-902293 Msa0709780:three_prime_UTR 40.0%
GGATCTGTATTGAGAGGTAA+GGG - chr5_1:902275-902294 Msa0709780:three_prime_UTR 40.0%
! GTCGCAGGGTCTTATAAATA+AGG - chr5_1:902659-902678 Msa0709780:intron 40.0%
GATCTTATAATTAGGGACGG+AGG - chr5_1:902712-902731 Msa0709780:intron 40.0%
! GGTGTTGCCTACTATTATTG+GGG - chr5_1:903164-903183 Msa0709780:intron 40.0%
ATTGGGGATAATGTTACCGT+AGG - chr5_1:903180-903199 Msa0709780:intron 40.0%
!!! GGTCATAGTGCTGTTTTACA+TGG - chr5_1:903294-903313 Msa0709780:intron 40.0%
TTTACATGGTTGCACTGTTG+AGG - chr5_1:903308-903327 Msa0709780:intron 40.0%
! GATGAGGCTTTTGTTGGTAT+GGG - chr5_1:903330-903349 Msa0709780:intron 40.0%
CGTCGTTGAGAAAAATGCTA+TGG - chr5_1:903374-903393 Msa0709780:intron 40.0%
AAAAATGCTATGGTTGCTGC+TGG - chr5_1:903384-903403 Msa0709780:intron 40.0%
CTTTGTATTCTGCCTCACAA+GGG + chr5_1:903412-903431 None:intergenic 40.0%
TCTTTGTATTCTGCCTCACA+AGG + chr5_1:903413-903432 None:intergenic 40.0%
GATTGTGTACGGTATAGTAG+AGG - chr5_1:903497-903516 Msa0709780:intron 40.0%
AAAGCAGATAGAGATGGAGA+AGG - chr5_1:903610-903629 Msa0709780:intron 40.0%
ACATACTACACTGTCAGTCT+AGG - chr5_1:903902-903921 Msa0709780:intron 40.0%
! TTACTGTGAGAGTATGACTG+TGG - chr5_1:904334-904353 Msa0709780:intron 40.0%
TCGCACAATTGTGAAACTTG+GGG + chr5_1:904462-904481 None:intergenic 40.0%
GCAAAGGAGGATAAAGTTGA+GGG + chr5_1:904518-904537 None:intergenic 40.0%
TGCAAAGGAGGATAAAGTTG+AGG + chr5_1:904519-904538 None:intergenic 40.0%
! AGGACTAGTAAATGCAAAGG+AGG + chr5_1:904531-904550 None:intergenic 40.0%
! TGGAGGACTAGTAAATGCAA+AGG + chr5_1:904534-904553 None:intergenic 40.0%
ATAGGAGAGTGAGAGTGAAA+AGG + chr5_1:904672-904691 None:intergenic 40.0%
TCAACATACTCATTGGCGAT+GGG - chr5_1:904824-904843 Msa0709780:intron 40.0%
!! TGATGGTGGGTGAAATTAGA+AGG - chr5_1:905206-905225 Msa0709780:intron 40.0%
!! GATGGTGGGTGAAATTAGAA+GGG - chr5_1:905207-905226 Msa0709780:intron 40.0%
AGTGTGAGAGTGAGAAAGAA+TGG - chr5_1:905239-905258 Msa0709780:intron 40.0%
GAAAGAATGGAGGTTTGATG+TGG - chr5_1:905252-905271 Msa0709780:intron 40.0%
TTTGATGTGGAGGTTGAAAG+AGG - chr5_1:905265-905284 Msa0709780:intron 40.0%
AGGTTGAAAGAGGAAGGAAA+AGG - chr5_1:905275-905294 Msa0709780:intron 40.0%
TTGAAAGAGGAAGGAAAAGG+AGG - chr5_1:905278-905297 Msa0709780:intron 40.0%
! GTTAATTTTCACGTTGGCCA+TGG - chr5_1:905326-905345 Msa0709780:intron 40.0%
ATGCAAAAGGGGTAATGTTG+AGG - chr5_1:905414-905433 Msa0709780:intron 40.0%
TGCAAAAGGGGTAATGTTGA+GGG - chr5_1:905415-905434 Msa0709780:intron 40.0%
! ACCGCTCATTTTAAACTTGG+TGG - chr5_1:905444-905463 Msa0709780:intron 40.0%
! GCCACCAAGTTTAAAATGAG+CGG + chr5_1:905448-905467 None:intergenic 40.0%
!! CGCACAATTCTAAAACTTGG+GGG - chr5_1:905474-905493 Msa0709780:intron 40.0%
!! GCACAATTCTAAAACTTGGG+GGG - chr5_1:905475-905494 Msa0709780:intron 40.0%
CGCACAAATGTTAAACTTGG+GGG - chr5_1:905509-905528 Msa0709780:intron 40.0%
GCACAAATGTTAAACTTGGG+GGG - chr5_1:905510-905529 Msa0709780:intron 40.0%
AAATATGGTGAAATGCAGCC+AGG - chr5_1:905761-905780 Msa0709780:intron 40.0%
TGTATCCATGCCATACACTT+TGG + chr5_1:905792-905811 None:intergenic 40.0%
AAGATTTAGGGACCTGGATT+TGG + chr5_1:905898-905917 None:intergenic 40.0%
TTGTGAAAAGACGCAAAAGC+AGG + chr5_1:905949-905968 None:intergenic 40.0%
CCAGAATAACCAAGGAAACT+TGG + chr5_1:906158-906177 None:intergenic 40.0%
CCAAGTTTCCTTGGTTATTC+TGG - chr5_1:906155-906174 Msa0709780:intron 40.0%
! TTTCCTTGGTTATTCTGGCT+TGG - chr5_1:906160-906179 Msa0709780:intron 40.0%
!! TTCCTTGGTTATTCTGGCTT+GGG - chr5_1:906161-906180 Msa0709780:intron 40.0%
!! AAGATACAAAGGCACTTGAG+GGG + chr5_1:906199-906218 None:intergenic 40.0%
!! GAAAGATACAAAGGCACTTG+AGG + chr5_1:906201-906220 None:intergenic 40.0%
!! TAAGGGGTACCAACATAGTT+GGG - chr5_1:906270-906289 Msa0709780:intron 40.0%
! TTGGGGATTTTGCCAAGTTA+GGG + chr5_1:906635-906654 None:intergenic 40.0%
! TTTGGGGATTTTGCCAAGTT+AGG + chr5_1:906636-906655 None:intergenic 40.0%
!! AAATCCCCAAATTGATGACG+TGG - chr5_1:906645-906664 Msa0709780:intron 40.0%
CCTATGTGACATTGCTTACA+TGG + chr5_1:906694-906713 None:intergenic 40.0%
CCATGTAAGCAATGTCACAT+AGG - chr5_1:906691-906710 Msa0709780:intron 40.0%
!! TTTTTGGTACCCCTTCACTT+TGG + chr5_1:906748-906767 None:intergenic 40.0%
! CACAAACTTGTTTCCACCAT+TGG - chr5_1:906913-906932 Msa0709780:intron 40.0%
CATCAAATCGCAATTGATCC+AGG + chr5_1:906953-906972 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG - chr5_1:907098-907117 Msa0709780:intron 40.0%
AAACCTTATCCCACTAAGTG+GGG - chr5_1:907099-907118 Msa0709780:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr5_1:907239-907258 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG - chr5_1:907277-907296 Msa0709780:intron 40.0%
ACACCATTAAAGAGAGAGTG+GGG + chr5_1:907370-907389 None:intergenic 40.0%
GACACCATTAAAGAGAGAGT+GGG + chr5_1:907371-907390 None:intergenic 40.0%
TGACACCATTAAAGAGAGAG+TGG + chr5_1:907372-907391 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG + chr5_1:907397-907416 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG + chr5_1:907611-907630 None:intergenic 40.0%
AGCTTTCTTAGAAACTTCGC+TGG + chr5_1:908001-908020 None:intergenic 40.0%
! AGTATAATTGGTGGCTGACT+GGG + chr5_1:908050-908069 None:intergenic 40.0%
! TAGTATAATTGGTGGCTGAC+TGG + chr5_1:908051-908070 None:intergenic 40.0%
! TGAGGAGTATGACTCTATGT+TGG - chr5_1:908162-908181 Msa0709780:intron 40.0%
! GAGGAGTATGACTCTATGTT+GGG - chr5_1:908163-908182 Msa0709780:intron 40.0%
!! ACTCTATGTTGGGTGTTGTT+CGG - chr5_1:908173-908192 Msa0709780:intron 40.0%
!! CCCCTTGATGTTTTCAAGAT+TGG + chr5_1:908297-908316 None:intergenic 40.0%
! CATGGAAGAGGGGTTTATTT+TGG - chr5_1:908337-908356 Msa0709780:CDS 40.0%
ACTCTAGCCTAGAAAACGTT+TGG + chr5_1:908375-908394 None:intergenic 40.0%
! CGTTTTCTAGGCTAGAGTTA+TGG - chr5_1:908377-908396 Msa0709780:CDS 40.0%
TATTATGAGCAATCGCTTCC+TGG + chr5_1:908416-908435 None:intergenic 40.0%
TCAAACTGTGTTCTCCACTT+TGG - chr5_1:908438-908457 Msa0709780:CDS 40.0%
CAAACTGTGTTCTCCACTTT+GGG - chr5_1:908439-908458 Msa0709780:CDS 40.0%
!! AACCGTGTTTTTGTTGAGTG+TGG - chr5_1:908622-908641 Msa0709780:five_prime_UTR 40.0%
GAAGAAGAAATGGGAACCCT+CGG - chr5_1:902026-902045 Msa0709780:three_prime_UTR 45.0%
GCTGTATATTGCTCTTCCGA+GGG + chr5_1:902045-902064 None:intergenic 45.0%
GGAAGAGCAATATACAGCGT+TGG - chr5_1:902047-902066 Msa0709780:three_prime_UTR 45.0%
! ACAGCGTTGGACAGTTGATT+CGG - chr5_1:902060-902079 Msa0709780:three_prime_UTR 45.0%
!! GGACAGTTGATTCGGAAAAC+TGG - chr5_1:902068-902087 Msa0709780:three_prime_UTR 45.0%
ACATCGAAGAACAGCTCTCT+AGG - chr5_1:902132-902151 Msa0709780:three_prime_UTR 45.0%
ATGTGCGTAAAATGTGTCGC+AGG - chr5_1:902644-902663 Msa0709780:intron 45.0%
TGTGCGTAAAATGTGTCGCA+GGG - chr5_1:902645-902664 Msa0709780:intron 45.0%
TGGAAGTGGAACTAACCTAC+AGG - chr5_1:903098-903117 Msa0709780:intron 45.0%
TAACCTACAGGATAACTCCC+TGG - chr5_1:903110-903129 Msa0709780:intron 45.0%
TGACTTTGCAACATGCACCA+GGG + chr5_1:903130-903149 None:intergenic 45.0%
TTGACTTTGCAACATGCACC+AGG + chr5_1:903131-903150 None:intergenic 45.0%
GCAAAAAGGTCACTCACCTA+CGG + chr5_1:903199-903218 None:intergenic 45.0%
! GTTGAGGATGAGGCTTTTGT+TGG - chr5_1:903324-903343 Msa0709780:intron 45.0%
! GGATGAGGCTTTTGTTGGTA+TGG - chr5_1:903329-903348 Msa0709780:intron 45.0%
ATGGGTGCAATTCTGCTTGA+TGG - chr5_1:903348-903367 Msa0709780:intron 45.0%
TACAAAGATTCCATCTGGCG+AGG - chr5_1:903425-903444 Msa0709780:intron 45.0%
ATTAGACATACCTCGCCAGA+TGG + chr5_1:903438-903457 None:intergenic 45.0%
CTGGCGAGGTATGTCTAATT+TGG - chr5_1:903439-903458 Msa0709780:intron 45.0%
!! TTAGGTCGCTGGTTTGAATC+CGG - chr5_1:903531-903550 Msa0709780:intron 45.0%
AACTCCGGCTCTACCAATTT+GGG + chr5_1:903565-903584 None:intergenic 45.0%
TAACTCCGGCTCTACCAATT+TGG + chr5_1:903566-903585 None:intergenic 45.0%
CAAGCTTATTCTTACGAGGG+AGG + chr5_1:903790-903809 None:intergenic 45.0%
! TACACTGTCAGTCTAGGACT+AGG - chr5_1:903908-903927 Msa0709780:intron 45.0%
! ACACTGTCAGTCTAGGACTA+GGG - chr5_1:903909-903928 Msa0709780:intron 45.0%
CTGTGTCAACACTAGCACTA+TGG - chr5_1:904263-904282 Msa0709780:intron 45.0%
CGCACAATTGTGAAACTTGG+GGG + chr5_1:904461-904480 None:intergenic 45.0%
TTTGGTCAAAATGCGCATGG+AGG + chr5_1:904551-904570 None:intergenic 45.0%
TTGACCAAATAACGCTGACG+TGG - chr5_1:904562-904581 Msa0709780:intron 45.0%
TTAGCCACGTCAGCGTTATT+TGG + chr5_1:904569-904588 None:intergenic 45.0%
! GGGAGTGTGAGAGTAGAAAT+AGG + chr5_1:904690-904709 None:intergenic 45.0%
GTTCACTCGCTCATTCCATT+GGG + chr5_1:904733-904752 None:intergenic 45.0%
AGTTCACTCGCTCATTCCAT+TGG + chr5_1:904734-904753 None:intergenic 45.0%
GTCAACATACTCATTGGCGA+TGG - chr5_1:904823-904842 Msa0709780:intron 45.0%
TTGTAAGCGATGACAGACAG+TGG + chr5_1:905043-905062 None:intergenic 45.0%
GTCTGTCATCGCTTACAACA+CGG - chr5_1:905045-905064 Msa0709780:intron 45.0%
AATCTCTCCAGAACCATCGA+GGG - chr5_1:905181-905200 Msa0709780:intron 45.0%
GTGAGAGTGAGAAAGAATGG+AGG - chr5_1:905242-905261 Msa0709780:intron 45.0%
AGAATGGAGGTTTGATGTGG+AGG - chr5_1:905255-905274 Msa0709780:intron 45.0%
ATGTGGAGGTTGAAAGAGGA+AGG - chr5_1:905269-905288 Msa0709780:intron 45.0%
!!! TTAGCCACGCGAGTGTTTTT+TGG - chr5_1:905366-905385 Msa0709780:intron 45.0%
TTGACCAAAAAACACTCGCG+TGG + chr5_1:905373-905392 None:intergenic 45.0%
GCAAAAGGGGTAATGTTGAG+GGG - chr5_1:905416-905435 Msa0709780:intron 45.0%
AGCATCCAAAGTGTATGGCA+TGG - chr5_1:905784-905803 Msa0709780:intron 45.0%
AACGGTAGTTGTGCTCATGT+GGG + chr5_1:905826-905845 None:intergenic 45.0%
AAACGGTAGTTGTGCTCATG+TGG + chr5_1:905827-905846 None:intergenic 45.0%
CATCCATGCAGCTCAAGAAT+TGG + chr5_1:906015-906034 None:intergenic 45.0%
AACCCAAGCCAGAATAACCA+AGG + chr5_1:906166-906185 None:intergenic 45.0%
!!! GGTTATTCTGGCTTGGGTTT+TGG - chr5_1:906167-906186 Msa0709780:intron 45.0%
!! CTAAGGGGTACCAACATAGT+TGG - chr5_1:906269-906288 Msa0709780:intron 45.0%
CCAAGACATCCCAACTATGT+TGG + chr5_1:906282-906301 None:intergenic 45.0%
CCAACATAGTTGGGATGTCT+TGG - chr5_1:906279-906298 Msa0709780:intron 45.0%
! GGAAACGAGGTGTCAAATGA+TGG + chr5_1:906521-906540 None:intergenic 45.0%
! TGGTAATGAGGTGTCTAGTG+AGG - chr5_1:906665-906684 Msa0709780:intron 45.0%
GGCGTGCTCATTAATGATGT+GGG + chr5_1:906718-906737 None:intergenic 45.0%
TGGCGTGCTCATTAATGATG+TGG + chr5_1:906719-906738 None:intergenic 45.0%
GGTGGAAACAAGTTTGTGCA+TGG + chr5_1:906911-906930 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG + chr5_1:907100-907119 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG - chr5_1:907097-907116 Msa0709780:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr5_1:907245-907264 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr5_1:907255-907274 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG - chr5_1:907278-907297 Msa0709780:intron 45.0%
TACCCCCACTCTCTCTTTAA+TGG - chr5_1:907364-907383 Msa0709780:intron 45.0%
CACCATTAAAGAGAGAGTGG+GGG + chr5_1:907369-907388 None:intergenic 45.0%
GTGGTAAGACTAGACAGGAT+AGG + chr5_1:907403-907422 None:intergenic 45.0%
GATGAGTGGTAAGACTAGAC+AGG + chr5_1:907408-907427 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr5_1:907450-907469 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG - chr5_1:907453-907472 Msa0709780:CDS 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr5_1:907489-907508 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr5_1:907490-907509 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG - chr5_1:907494-907513 Msa0709780:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr5_1:907498-907517 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG - chr5_1:907565-907584 Msa0709780:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + chr5_1:907584-907603 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG + chr5_1:907598-907617 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG + chr5_1:907607-907626 None:intergenic 45.0%
AGCGCCTTTGAATGTTGTCA+TGG - chr5_1:907739-907758 Msa0709780:intron 45.0%
! CATATTTTGCAGGTTTGGGC+TGG - chr5_1:907971-907990 Msa0709780:intron 45.0%
!! CTCTATGTTGGGTGTTGTTC+GGG - chr5_1:908174-908193 Msa0709780:intron 45.0%
! TCAGGAAGAATAAGCTCTGG+TGG + chr5_1:908205-908224 None:intergenic 45.0%
!! TATGGCTCCTTTCAAGTTCC+AGG - chr5_1:908395-908414 Msa0709780:CDS 45.0%
ATCGCTTCCTGGAACTTGAA+AGG + chr5_1:908405-908424 None:intergenic 45.0%
! TGTGTTCTCCACTTTGGGTT+AGG - chr5_1:908444-908463 Msa0709780:CDS 45.0%
! GTGTTCTCCACTTTGGGTTA+GGG - chr5_1:908445-908464 Msa0709780:CDS 45.0%
! TGTTCTCCACTTTGGGTTAG+GGG - chr5_1:908446-908465 Msa0709780:CDS 45.0%
TTGAGTGTGGATATGTACCC+CGG - chr5_1:908635-908654 Msa0709780:five_prime_UTR 45.0%
!!! AATAGATATTTTTAAATTAA+TGG + chr5_1:906547-906566 None:intergenic 5.0%
!! AATTTAACAAAATTAAAAAT+AGG - chr5_1:906827-906846 Msa0709780:intron 5.0%
!! ATTTAACAAAATTAAAAATA+GGG - chr5_1:906828-906847 Msa0709780:intron 5.0%
!! ACAAAAAAAAAAAAAAATTA+AGG + chr5_1:907854-907873 None:intergenic 5.0%
!!! TAATTTTTTTTTTTTTTTGT+TGG - chr5_1:907854-907873 Msa0709780:intron 5.0%
CTTGAGCATCAGAGACTGAG+AGG + chr5_1:901957-901976 None:intergenic 50.0%
CGCTGTATATTGCTCTTCCG+AGG + chr5_1:902046-902065 None:intergenic 50.0%
ATGAGAACCGAGGCGATCAA+CGG + chr5_1:902099-902118 None:intergenic 50.0%
GTTCTTCGATGTAGCCACCT+TGG + chr5_1:902124-902143 None:intergenic 50.0%
TCACCAATGACAGCTGCACT+TGG + chr5_1:902221-902240 None:intergenic 50.0%
TGGTTGCACTGTTGAGGATG+AGG - chr5_1:903314-903333 Msa0709780:intron 50.0%
!! GTAGAGGCAGAGTTAGCCTT+AGG - chr5_1:903513-903532 Msa0709780:intron 50.0%
GGATTCAAACCAGCGACCTA+AGG + chr5_1:903532-903551 None:intergenic 50.0%
CTTACGAGGGAGGTTCATAG+AGG + chr5_1:903780-903799 None:intergenic 50.0%
! CACTGTCAGTCTAGGACTAG+GGG - chr5_1:903910-903929 Msa0709780:intron 50.0%
GTGTCATGCTGTCATGGTGA+TGG + chr5_1:904292-904311 None:intergenic 50.0%
! CTGTAGGTGTCATGCTGTCA+TGG + chr5_1:904298-904317 None:intergenic 50.0%
TCTCCACGTGTTTGCCAACA+TGG - chr5_1:904605-904624 Msa0709780:intron 50.0%
CTCCACGTGTTTGCCAACAT+GGG - chr5_1:904606-904625 Msa0709780:intron 50.0%
TTCCCATGTTGGCAAACACG+TGG + chr5_1:904611-904630 None:intergenic 50.0%
GCGAGTGAACTTGACTACGT+TGG - chr5_1:904743-904762 Msa0709780:intron 50.0%
ACATACTCATTGGCGATGGG+CGG - chr5_1:904827-904846 Msa0709780:intron 50.0%
ATCGCTTACAACACGGCAAG+AGG - chr5_1:905052-905071 Msa0709780:intron 50.0%
GAATCTCTCCAGAACCATCG+AGG - chr5_1:905180-905199 Msa0709780:intron 50.0%
CCATACACTTTGGATGCTCC+TGG + chr5_1:905782-905801 None:intergenic 50.0%
!! CCAGGAGCATCCAAAGTGTA+TGG - chr5_1:905779-905798 Msa0709780:intron 50.0%
TGGCCAATTCTTGAGCTGCA+TGG - chr5_1:906009-906028 Msa0709780:intron 50.0%
AGGCAGATGCCAAGTTTCCT+TGG - chr5_1:906146-906165 Msa0709780:intron 50.0%
!! TTTTTGGTCCCCCTCCTCTT+TGG - chr5_1:906439-906458 Msa0709780:intron 50.0%
CACATCATCCAAAGAGGAGG+GGG + chr5_1:906450-906469 None:intergenic 50.0%
CCACATCATCCAAAGAGGAG+GGG + chr5_1:906451-906470 None:intergenic 50.0%
GCCACATCATCCAAAGAGGA+GGG + chr5_1:906452-906471 None:intergenic 50.0%
CCATATTAGCAAGGCCACGT+AGG + chr5_1:906496-906515 None:intergenic 50.0%
! CCTACGTGGCCTTGCTAATA+TGG - chr5_1:906493-906512 Msa0709780:intron 50.0%
GCCACCTCATCCAAAGTGAA+GGG - chr5_1:906735-906754 Msa0709780:intron 50.0%
CCACCTCATCCAAAGTGAAG+GGG - chr5_1:906736-906755 Msa0709780:intron 50.0%
GTACCCCTTCACTTTGGATG+AGG + chr5_1:906742-906761 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr5_1:907103-907122 Msa0709780:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+CGG + chr5_1:907442-907461 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + chr5_1:907503-907522 None:intergenic 50.0%
! GTTCTCCACTTTGGGTTAGG+GGG - chr5_1:908447-908466 Msa0709780:CDS 50.0%
ACTTTCCCCCTAACCCAAAG+TGG + chr5_1:908455-908474 None:intergenic 50.0%
! TTAGGGGGAAAGTGTGTGGT+AGG - chr5_1:908462-908481 Msa0709780:CDS 50.0%
CATCAGAGACTGAGAGGTCG+AGG + chr5_1:901951-901970 None:intergenic 55.0%
CACCTTGGAGATGAGAACCG+AGG + chr5_1:902109-902128 None:intergenic 55.0%
CTCGGTTCTCATCTCCAAGG+TGG - chr5_1:902107-902126 Msa0709780:three_prime_UTR 55.0%
GCACCAAGTGCAGCTGTCAT+TGG - chr5_1:902215-902234 Msa0709780:three_prime_UTR 55.0%
GCACCAGGGAGTTATCCTGT+AGG + chr5_1:903116-903135 None:intergenic 55.0%
!! CAGAGTTAGCCTTAGGTCGC+TGG - chr5_1:903520-903539 Msa0709780:intron 55.0%
! CTGGTTTGAATCCGGCAGGT+CGG - chr5_1:903539-903558 Msa0709780:intron 55.0%
TCGGCCCAAATTGGTAGAGC+CGG - chr5_1:903558-903577 Msa0709780:intron 55.0%
CATCAAGCCCTCGATGGTTC+TGG + chr5_1:905191-905210 None:intergenic 55.0%
CAGAACCATCGAGGGCTTGA+TGG - chr5_1:905189-905208 Msa0709780:intron 55.0%
AACCATCGAGGGCTTGATGG+TGG - chr5_1:905192-905211 Msa0709780:intron 55.0%
! ACCATCGAGGGCTTGATGGT+GGG - chr5_1:905193-905212 Msa0709780:intron 55.0%
CCCCTCCTCTTTGGATGATG+TGG - chr5_1:906448-906467 Msa0709780:intron 55.0%
CGCCACATCATCCAAAGAGG+AGG + chr5_1:906453-906472 None:intergenic 55.0%
GTGCGCCACATCATCCAAAG+AGG + chr5_1:906456-906475 None:intergenic 55.0%
CGCCACCTCATCCAAAGTGA+AGG - chr5_1:906734-906753 Msa0709780:intron 55.0%
CCCCTTCACTTTGGATGAGG+TGG + chr5_1:906739-906758 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr5_1:907105-907124 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr5_1:907111-907130 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr5_1:907112-907131 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr5_1:907111-907130 Msa0709780:intron 55.0%
CGGATGTTGCGTTGGATGAG+TGG + chr5_1:907422-907441 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + chr5_1:907516-907535 None:intergenic 55.0%
! TGGGTTAGGGGGAAAGTGTG+TGG - chr5_1:908458-908477 Msa0709780:CDS 55.0%
AGTGTGGATATGTACCCCGG+TGG - chr5_1:908638-908657 Msa0709780:five_prime_UTR 55.0%
CTGAGAGGTCGAGGTAGACG+TGG + chr5_1:901942-901961 None:intergenic 60.0%
GGTCAAGCCGTTGATCGCCT+CGG - chr5_1:902089-902108 Msa0709780:three_prime_UTR 60.0%
CGCCTCGGTTCTCATCTCCA+AGG - chr5_1:902104-902123 Msa0709780:three_prime_UTR 60.0%
TTGCTGCTGGAGCCCTTGTG+AGG - chr5_1:903397-903416 Msa0709780:intron 60.0%
!! GTCGCTGGTTTGAATCCGGC+AGG - chr5_1:903535-903554 Msa0709780:intron 60.0%
ACCAATTTGGGCCGACCTGC+CGG + chr5_1:903553-903572 None:intergenic 60.0%
ACCCACCATCAAGCCCTCGA+TGG + chr5_1:905197-905216 None:intergenic 60.0%
CGGAGATGCGGATGTTGCGT+TGG + chr5_1:907430-907449 None:intergenic 60.0%
CAGCTGCATGGACCTGTGCA+AGG + chr5_1:908075-908094 None:intergenic 60.0%
TCCGGCAGGTCGGCCCAAAT+TGG - chr5_1:903549-903568 Msa0709780:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 901921 908667 901921 ID=Msa0709780;Name=Msa0709780
chr5_1 mRNA 901921 908667 901921 ID=Msa0709780-mRNA-1;Parent=Msa0709780;Name=Msa0709780-mRNA-1;_AED=0.04;_eAED=0.04;_QI=114|1|1|1|1|1|4|400|272
chr5_1 exon 901921 902605 901921 ID=Msa0709780-mRNA-1:exon:464;Parent=Msa0709780-mRNA-1
chr5_1 exon 907142 907293 907142 ID=Msa0709780-mRNA-1:exon:463;Parent=Msa0709780-mRNA-1
chr5_1 exon 907387 907512 907387 ID=Msa0709780-mRNA-1:exon:462;Parent=Msa0709780-mRNA-1
chr5_1 exon 908298 908667 908298 ID=Msa0709780-mRNA-1:exon:461;Parent=Msa0709780-mRNA-1
chr5_1 five_prime_UTR 908554 908667 908554 ID=Msa0709780-mRNA-1:five_prime_utr;Parent=Msa0709780-mRNA-1
chr5_1 CDS 908298 908553 908298 ID=Msa0709780-mRNA-1:cds;Parent=Msa0709780-mRNA-1
chr5_1 CDS 907387 907512 907387 ID=Msa0709780-mRNA-1:cds;Parent=Msa0709780-mRNA-1
chr5_1 CDS 907142 907293 907142 ID=Msa0709780-mRNA-1:cds;Parent=Msa0709780-mRNA-1
chr5_1 CDS 902321 902605 902321 ID=Msa0709780-mRNA-1:cds;Parent=Msa0709780-mRNA-1
chr5_1 three_prime_UTR 901921 902320 901921 ID=Msa0709780-mRNA-1:three_prime_utr;Parent=Msa0709780-mRNA-1
Gene Sequence

>Msa0709780

ATGGGAACCCTCGGAAGAGCAATATACAGCGTTGGACAGTTGATTCGGAAAACTGGTCAAGCCGTTGATCGCCTCGGTTCTCATCTCCAAGGTGGCTACATCGAAGAACAGCTCTCTAGGCATCGAACTATCTTGAACATATTTGACAAGGCTCCTGTTATTGATAAGGATGTCTTTGTTGCACCAAGTGCAGCTGTCATTGGTGATGTTCAGATTGGAAAAGGGTCATCAATTTGGTATGGATCTGTATTGAGAGGTGATGTTAACAGCATTAGAATTGGAAGTGGAACTAACCTACAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACTATTATTGGGGATAATGTTACCGTAGGTCATAGTGCTGTTTTACATGGTTGCACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTGCTTGATGGCGTCGTCGTTGAGAAAAATGCTATGGTTGCTGCTGGAGCCCTTGTGAGGCAGAATACAAAGATTCCATCTGGCGAGGTTTGGGCTGGCAATCCAGCGAAGTTTCTAAGAAAGCTCACCGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAATTATACTAACCTTGCACAGGTCCATGCAGCTGAAAATTCAAAGTCCTATGAAGAAATTGAGTTTGAGAAGGTGCTGCGTAAGAAGTATGCAACTAAAGATGAGGAGTATGACTCTATGTTGGGTGTTGTTCGGGAGATTCCACCAGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAAAAAAAGCTCTTAAAATATGA
Protein sequence

>Msa0709780

MGTLGRAIYSVGQLIRKTGQAVDRLGSHLQGGYIEEQLSRHRTILNIFDKAPVIDKDVFVAPSAAVIGDVQIGKGSSIWYGSVLRGDVNSIRIGSGTNLQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTKIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENSKSYEEIEFEKVLRKKYATKDEEYDSMLGVVREIPPELILPDNVLPDKAKKALKI*