AlfalfaGEDB | Msa0074030

M. sativa cultivar zhongmu-4 / Msa0074030

KEGG: K02973
GO: -
PFAM: PF00164.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0074030	RZB48484.1	100.000	142	0	0	1	142	97	238	2.72e-98	292

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0074030	sp\|Q9M5Z9\|RS23_EUPES	99.296	142	1	0	1	142	1	142	4.61e-100	286

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0074030	A0A445FI55	100.000	142	0	0	1	142	97	238	1.30e-98	292

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000100	Msa0074030	0.818953	1.497562e-52	-8.615850e-47
Msa0002750	Msa0074030	0.870435	1.462953e-66	-8.615850e-47
Msa0002790	Msa0074030	0.878410	2.873764e-69	-8.615850e-47
Msa0003780	Msa0074030	0.825191	5.362151e-54	-8.615850e-47
Msa0022970	Msa0074030	0.865019	7.998032e-65	-8.615850e-47
Msa0027260	Msa0074030	0.870553	1.337741e-66	-8.615850e-47
Msa0040690	Msa0074030	0.835832	1.333488e-56	-8.615850e-47
Msa0042280	Msa0074030	0.802433	5.624036e-49	-8.615850e-47
Msa0047160	Msa0074030	0.840199	1.003933e-57	-8.615850e-47
Msa0048180	Msa0074030	0.859315	4.503548e-63	-8.615850e-47
Msa0055180	Msa0074030	0.816071	6.678627e-52	-8.615850e-47
Msa0055190	Msa0074030	0.810832	9.473610e-51	-8.615850e-47
Msa0056470	Msa0074030	0.803430	3.498884e-49	-8.615850e-47
Msa0074030	Msa0074320	0.829047	6.404641e-55	-8.615850e-47
Msa0074030	Msa0076040	0.812619	3.870288e-51	-8.615850e-47
Msa0074030	Msa0077530	0.841127	5.736486e-58	-8.615850e-47
Msa0074030	Msa0085780	0.827633	1.404454e-54	-8.615850e-47
Msa0074030	Msa0086750	0.859305	4.535012e-63	-8.615850e-47
Msa0074030	Msa0091880	0.812285	4.579241e-51	-8.615850e-47
Msa0074030	Msa0094470	0.849781	2.593619e-60	-8.615850e-47
Msa0074030	Msa0097600	0.811325	7.409525e-51	-8.615850e-47
Msa0074030	Msa0100740	0.820715	5.924420e-53	-8.615850e-47
Msa0074030	Msa0105370	0.821581	3.741515e-53	-8.615850e-47
Msa0074030	Msa0114870	0.824694	7.026790e-54	-8.615850e-47
Msa0074030	Msa0116130	0.832232	1.063385e-55	-8.615850e-47
Msa0074030	Msa0116670	0.957241	4.357057e-115	-8.615850e-47
Msa0074030	Msa0118710	0.848787	4.905486e-60	-8.615850e-47
Msa0074030	Msa0122970	0.803692	3.087823e-49	-8.615850e-47
Msa0074030	Msa0128860	0.871840	5.029432e-67	-8.615850e-47
Msa0074030	Msa0133540	0.859077	5.307941e-63	-8.615850e-47
Msa0074030	Msa0138920	0.816030	6.822893e-52	-8.615850e-47
Msa0074030	Msa0140820	0.813364	2.657887e-51	-8.615850e-47
Msa0074030	Msa0140850	0.810526	1.103412e-50	-8.615850e-47
Msa0074030	Msa0146340	0.831512	1.600341e-55	-8.615850e-47
Msa0074030	Msa0163760	0.803880	2.822491e-49	-8.615850e-47
Msa0074030	Msa0167480	0.859029	5.486054e-63	-8.615850e-47
Msa0074030	Msa0172900	0.817152	3.824216e-52	-8.615850e-47
Msa0074030	Msa0173530	0.959113	4.374956e-117	-8.615850e-47
Msa0074030	Msa0174730	0.871173	8.362924e-67	-8.615850e-47
Msa0074030	Msa0180020	0.805224	1.480012e-49	-8.615850e-47
Msa0074030	Msa0181490	0.843133	1.689489e-58	-8.615850e-47
Msa0074030	Msa0181610	0.812281	4.586668e-51	-8.615850e-47
Msa0074030	Msa0183090	0.806494	8.005303e-50	-8.615850e-47
Msa0074030	Msa0187690	0.828034	1.125030e-54	-8.615850e-47
Msa0074030	Msa0187930	0.870673	1.222101e-66	-8.615850e-47
Msa0074030	Msa0188350	0.813844	2.083922e-51	-8.615850e-47
Msa0074030	Msa0189700	0.855047	8.200080e-62	-8.615850e-47
Msa0074030	Msa0194540	0.871899	4.808614e-67	-8.615850e-47
Msa0074030	Msa0199880	0.810138	1.337643e-50	-8.615850e-47
Msa0074030	Msa0202020	0.808245	3.404648e-50	-8.615850e-47
Msa0074030	Msa0209510	0.813964	1.960371e-51	-8.615850e-47
Msa0074030	Msa0210360	0.827360	1.633339e-54	-8.615850e-47
Msa0074030	Msa0218830	0.855898	4.631120e-62	-8.615850e-47
Msa0074030	Msa0219120	0.807467	4.983955e-50	-8.615850e-47
Msa0074030	Msa0220720	0.809858	1.536909e-50	-8.615850e-47
Msa0074030	Msa0221030	0.848596	5.543083e-60	-8.615850e-47
Msa0074030	Msa0222730	0.818121	2.312859e-52	-8.615850e-47
Msa0074030	Msa0230490	0.854280	1.367734e-61	-8.615850e-47
Msa0074030	Msa0231100	0.842878	1.976158e-58	-8.615850e-47
Msa0074030	Msa0232010	0.854292	1.356325e-61	-8.615850e-47
Msa0074030	Msa0232080	0.856632	2.821016e-62	-8.615850e-47
Msa0074030	Msa0244780	0.872185	3.860939e-67	-8.615850e-47
Msa0074030	Msa0250820	0.830982	2.160225e-55	-8.615850e-47
Msa0074030	Msa0257450	0.811185	7.945480e-51	-8.615850e-47
Msa0074030	Msa0258850	0.815532	8.808095e-52	-8.615850e-47
Msa0074030	Msa0262050	0.806649	7.422636e-50	-8.615850e-47
Msa0074030	Msa0262480	0.844928	5.578193e-59	-8.615850e-47
Msa0074030	Msa0264010	0.861176	1.232711e-63	-8.615850e-47
Msa0074030	Msa0268130	0.872154	3.953784e-67	-8.615850e-47
Msa0074030	Msa0280610	0.826143	3.188088e-54	-8.615850e-47
Msa0074030	Msa0289580	0.854533	1.155610e-61	-8.615850e-47
Msa0074030	Msa0289610	0.866178	3.448223e-65	-8.615850e-47
Msa0074030	Msa0296720	0.800175	1.630616e-48	-8.615850e-47
Msa0074030	Msa0298200	0.815030	1.139144e-51	-8.615850e-47
Msa0074030	Msa0298990	0.871505	6.493392e-67	-8.615850e-47
Msa0074030	Msa0300350	0.861987	6.968141e-64	-8.615850e-47
Msa0074030	Msa0306690	0.835088	2.056677e-56	-8.615850e-47
Msa0074030	Msa0317910	0.811061	8.453218e-51	-8.615850e-47
Msa0074030	Msa0327300	0.881042	3.334152e-70	-8.615850e-47
Msa0074030	Msa0327330	0.858566	7.547456e-63	-8.615850e-47
Msa0074030	Msa0336010	0.818406	1.992660e-52	-8.615850e-47
Msa0074030	Msa0337240	0.804760	1.850731e-49	-8.615850e-47
Msa0074030	Msa0348830	0.832263	1.044477e-55	-8.615850e-47
Msa0074030	Msa0369450	0.848168	7.280347e-60	-8.615850e-47
Msa0074030	Msa0385300	0.822344	2.490432e-53	-8.615850e-47
Msa0074030	Msa0393370	0.817437	3.299847e-52	-8.615850e-47
Msa0074030	Msa0395820	0.805961	1.036454e-49	-8.615850e-47
Msa0074030	Msa0427150	0.805064	1.598874e-49	-8.615850e-47
Msa0074030	Msa0434920	0.813934	1.990450e-51	-8.615850e-47
Msa0074030	Msa0443390	0.870898	1.030113e-66	-8.615850e-47
Msa0074030	Msa0482650	0.835157	1.975575e-56	-8.615850e-47
Msa0074030	Msa0483110	0.810235	1.274904e-50	-8.615850e-47
Msa0074030	Msa0486070	0.805774	1.134905e-49	-8.615850e-47
Msa0074030	Msa0523120	0.818421	1.977590e-52	-8.615850e-47
Msa0074030	Msa0526540	0.889099	3.280783e-73	-8.615850e-47
Msa0074030	Msa0527150	0.817350	3.451546e-52	-8.615850e-47
Msa0074030	Msa0531650	0.812801	3.531840e-51	-8.615850e-47
Msa0074030	Msa0534750	0.800697	1.276080e-48	-8.615850e-47
Msa0074030	Msa0571920	0.857576	1.486141e-62	-8.615850e-47
Msa0074030	Msa0576940	0.883917	2.988681e-71	-8.615850e-47
Msa0074030	Msa0581110	0.830035	3.683619e-55	-8.615850e-47
Msa0074030	Msa0584260	0.815826	7.575504e-52	-8.615850e-47
Msa0074030	Msa0588360	0.871377	7.160633e-67	-8.615850e-47
Msa0074030	Msa0603320	0.832597	8.632902e-56	-8.615850e-47
Msa0074030	Msa0606580	0.804532	2.064567e-49	-8.615850e-47
Msa0074030	Msa0608320	0.801129	1.041447e-48	-8.615850e-47
Msa0074030	Msa0615440	0.838881	2.208911e-57	-8.615850e-47
Msa0074030	Msa0615580	0.850627	1.502480e-60	-8.615850e-47
Msa0074030	Msa0620890	0.801763	7.723971e-49	-8.615850e-47
Msa0074030	Msa0621950	0.838763	2.370270e-57	-8.615850e-47
Msa0074030	Msa0622750	0.806006	1.014368e-49	-8.615850e-47
Msa0074030	Msa0623200	0.805903	1.066381e-49	-8.615850e-47
Msa0074030	Msa0631250	0.818632	1.771418e-52	-8.615850e-47
Msa0074030	Msa0647280	0.800930	1.143698e-48	-8.615850e-47
Msa0074030	Msa0654870	0.805326	1.409168e-49	-8.615850e-47
Msa0074030	Msa0661300	0.824353	8.453550e-54	-8.615850e-47
Msa0074030	Msa0666230	0.846302	2.365287e-59	-8.615850e-47
Msa0074030	Msa0669520	0.800337	1.511085e-48	-8.615850e-47
Msa0074030	Msa0677290	0.807556	4.770881e-50	-8.615850e-47
Msa0074030	Msa0686800	0.806374	8.487034e-50	-8.615850e-47
Msa0074030	Msa0687870	0.802589	5.222218e-49	-8.615850e-47
Msa0074030	Msa0698490	0.840481	8.473108e-58	-8.615850e-47
Msa0074030	Msa0698660	0.842538	2.433128e-58	-8.615850e-47
Msa0074030	Msa0698780	0.822804	1.946662e-53	-8.615850e-47
Msa0074030	Msa0709780	0.811753	5.980408e-51	-8.615850e-47
Msa0074030	Msa0729200	0.850193	1.989648e-60	-8.615850e-47
Msa0074030	Msa0738100	0.858540	7.679197e-63	-8.615850e-47
Msa0074030	Msa0756250	0.802782	4.764164e-49	-8.615850e-47
Msa0074030	Msa0769590	0.857006	2.189135e-62	-8.615850e-47
Msa0074030	Msa0785130	0.873572	1.325371e-67	-8.615850e-47
Msa0074030	Msa0806880	0.871217	8.087321e-67	-8.615850e-47
Msa0074030	Msa0817540	0.885508	7.655981e-72	-8.615850e-47
Msa0074030	Msa0830090	0.841433	4.765853e-58	-8.615850e-47
Msa0074030	Msa0858770	0.802600	5.194183e-49	-8.615850e-47
Msa0074030	Msa0867060	0.809350	1.976535e-50	-8.615850e-47
Msa0074030	Msa0876800	0.838217	3.279339e-57	-8.615850e-47
Msa0074030	Msa0881290	0.855918	4.568712e-62	-8.615850e-47
Msa0074030	Msa0902760	0.824378	8.337015e-54	-8.615850e-47
Msa0074030	Msa0930490	0.808473	3.044083e-50	-8.615850e-47
Msa0074030	Msa0945480	0.806424	8.281992e-50	-8.615850e-47
Msa0074030	Msa0953310	0.843851	1.086375e-58	-8.615850e-47
Msa0074030	Msa1006840	0.863412	2.536192e-64	-8.615850e-47
Msa0074030	Msa1013400	0.822998	1.754809e-53	-8.615850e-47
Msa0074030	Msa1019240	0.881212	2.896012e-70	-8.615850e-47
Msa0074030	Msa1019260	0.896833	2.523536e-76	-8.615850e-47
Msa0074030	Msa1039520	0.817223	3.687078e-52	-8.615850e-47
Msa0074030	Msa1043690	0.819110	1.379046e-52	-8.615850e-47
Msa0074030	Msa1072710	0.838102	3.510401e-57	-8.615850e-47
Msa0074030	Msa1078870	0.851909	6.525955e-61	-8.615850e-47
Msa0074030	Msa1080350	0.812157	4.882620e-51	-8.615850e-47
Msa0074030	Msa1081150	0.862248	5.796992e-64	-8.615850e-47
Msa0074030	Msa1081930	0.809277	2.049137e-50	-8.615850e-47
Msa0074030	Msa1088490	0.831536	1.578771e-55	-8.615850e-47
Msa0074030	Msa1093530	0.822788	1.964413e-53	-8.615850e-47
Msa0074030	Msa1104140	0.882387	1.087341e-70	-8.615850e-47
Msa0074030	Msa1104210	0.884165	2.419879e-71	-8.615850e-47
Msa0074030	Msa1106700	0.807181	5.730280e-50	-8.615850e-47
Msa0074030	Msa1125860	0.813915	2.009630e-51	-8.615850e-47
Msa0074030	Msa1126060	0.809981	1.446429e-50	-8.615850e-47
Msa0074030	Msa1126510	0.864779	9.509428e-65	-8.615850e-47
Msa0074030	Msa1126830	0.831913	1.274827e-55	-8.615850e-47
Msa0074030	Msa1135890	0.826643	2.423589e-54	-8.615850e-47
Msa0074030	Msa1165780	0.815655	8.273249e-52	-8.615850e-47
Msa0074030	Msa1165940	0.804964	1.677346e-49	-8.615850e-47
Msa0074030	Msa1166860	0.863832	1.878205e-64	-8.615850e-47
Msa0074030	Msa1166870	0.849046	4.156181e-60	-8.615850e-47
Msa0074030	Msa1167540	0.811250	7.689795e-51	-8.615850e-47
Msa0074030	Msa1169180	0.808158	3.552942e-50	-8.615850e-47
Msa0074030	Msa1183450	0.801817	7.528750e-49	-8.615850e-47
Msa0074030	Msa1215820	0.865405	6.047078e-65	-8.615850e-47
Msa0074030	Msa1218140	0.823434	1.387925e-53	-8.615850e-47
Msa0074030	Msa1218600	0.820861	5.483449e-53	-8.615850e-47
Msa0074030	Msa1257510	0.853640	2.091305e-61	-8.615850e-47
Msa0074030	Msa1260530	0.806011	1.011743e-49	-8.615850e-47
Msa0074030	Msa1265630	0.839756	1.309594e-57	-8.615850e-47
Msa0074030	Msa1266060	0.806039	9.984057e-50	-8.615850e-47
Msa0074030	Msa1281190	0.802054	6.730923e-49	-8.615850e-47
Msa0074030	Msa1295150	0.801361	9.337086e-49	-8.615850e-47
Msa0074030	Msa1295170	0.803153	3.993037e-49	-8.615850e-47
Msa0074030	Msa1299590	0.851340	9.459517e-61	-8.615850e-47
Msa0074030	Msa1305050	0.805429	1.340682e-49	-8.615850e-47
Msa0074030	Msa1331710	0.829264	5.675069e-55	-8.615850e-47
Msa0074030	Msa1332250	0.849863	2.461177e-60	-8.615850e-47
Msa0074030	Msa1338190	0.860490	1.992038e-63	-8.615850e-47
Msa0074030	Msa1343260	0.879632	1.063080e-69	-8.615850e-47
Msa0074030	Msa1349570	0.872181	3.872057e-67	-8.615850e-47
Msa0074030	Msa1357350	0.829331	5.465018e-55	-8.615850e-47
Msa0074030	Msa1363330	0.891704	3.114018e-74	-8.615850e-47
Msa0074030	Msa1366180	0.845931	2.985345e-59	-8.615850e-47
Msa0074030	Msa1366800	0.811629	6.361774e-51	-8.615850e-47
Msa0074030	Msa1369190	0.828987	6.621757e-55	-8.615850e-47
Msa0074030	Msa1374120	0.830459	2.901439e-55	-8.615850e-47
Msa0074030	Msa1379760	0.872324	3.471649e-67	-8.615850e-47
Msa0074030	Msa1386600	0.891998	2.379681e-74	-8.615850e-47
Msa0074030	Msa1387410	0.830747	2.467841e-55	-8.615850e-47
Msa0074030	Msa1394290	0.847304	1.259014e-59	-8.615850e-47
Msa0074030	Msa1401390	0.803950	2.728793e-49	-8.615850e-47
Msa0074030	Msa1410440	0.802818	4.683294e-49	-8.615850e-47
Msa0074030	Msa1413500	0.875076	4.097666e-68	-8.615850e-47
Msa0074030	Msa1426120	0.849752	2.643120e-60	-8.615850e-47
Msa0074030	Msa1426370	0.830638	2.623300e-55	-8.615850e-47
Msa0074030	Msa1426490	0.844689	6.471635e-59	-8.615850e-47
Msa0074030	Msa1427560	0.846092	2.698706e-59	-8.615850e-47
Msa0074030	Msa1432700	0.824045	9.984990e-54	-8.615850e-47
Msa0074030	Msa1433310	0.818405	1.993969e-52	-8.615850e-47
Msa0074030	Msa1448690	0.871941	4.655374e-67	-8.615850e-47
Msa0074030	Msa1450280	0.838153	3.405617e-57	-8.615850e-47
Msa0074030	Msa1456050	0.800192	1.617205e-48	-8.615850e-47
Msa0074030	Msa1465260	0.816214	6.207084e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0074030	MtrunA17_Chr1g0181621	100.000	142	0	0	1	142	1	142	5.68e-102	288
Msa0074030	MtrunA17_Chr7g0263691	93.662	142	9	0	1	142	1	142	1.56e-94	269
Msa0074030	MtrunA17_Chr7g0239631	53.623	69	29	2	42	109	15	81	5.82e-16	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0074030	AT5G02960.1	95.070	142	7	0	1	142	1	142	8.13e-95	270
Msa0074030	AT3G09680.1	92.958	142	10	0	1	142	1	142	1.41e-91	262

Find 67 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGTTGTCTTACTCGTATTT+TGG	0.245236	1_2:+48172648	Msa0074030:three_prime_UTR
GCCAGATAATTCGAAAATTA+TGG	0.265240	1_2:-48172688	None:intergenic
ACTGGTTAACACTCTGTGTT+TGG	0.325594	1_2:+48172781	Msa0074030:three_prime_UTR
TTCAAAGTTGTGAAGGTCTC+TGG	0.336661	1_2:+48172390	Msa0074030:CDS
ACACTTACGAATAGCTGAAT+TGG	0.338181	1_2:-48172069	None:intergenic
TCTCCTTCTTCTCCTTGAAA+AGG	0.352760	1_2:-48172428	None:intergenic
TGCTTCCTGTTGAGTGGGCA+TGG	0.379548	1_2:+48172518	Msa0074030:three_prime_UTR
ATTCCACAAATCTAAGATCT+TGG	0.379899	1_2:-48172453	None:intergenic
GAGTAAGACAACCAGATGAT+AGG	0.389232	1_2:-48172639	None:intergenic
TGTGTTGAGCTCGGAGGTTA+TGG	0.405375	1_2:-48170838	None:intergenic
CATGCTGTGGGAGATATTCC+TGG	0.414411	1_2:+48172360	Msa0074030:CDS
CAGCTATTCGTAAGTGTGCC+AGG	0.416301	1_2:+48172075	Msa0074030:CDS
CTCCTTCTTCTCCTTGAAAA+GGG	0.418297	1_2:-48172427	None:intergenic
TGTGAATCTTCCCTATCATC+TGG	0.424196	1_2:+48172628	Msa0074030:three_prime_UTR
GTAGTTTAGACAACCATCAT+TGG	0.437937	1_2:-48172141	None:intergenic
AAGATCTTAGATTTGTGGAA+TGG	0.444307	1_2:+48172455	Msa0074030:exon
AATGCCCATGCCCACTCAAC+AGG	0.448997	1_2:-48172523	None:intergenic
GCTGCCTTTGTTCCCAATGA+TGG	0.449096	1_2:+48172128	Msa0074030:CDS
AGATCTTAGATTTGTGGAAT+GGG	0.462917	1_2:+48172456	Msa0074030:exon
TCATACAAGAAGTCTCATCT+TGG	0.473075	1_2:+48171871	Msa0074030:CDS
CACTTACGAATAGCTGAATT+GGG	0.473089	1_2:-48172068	None:intergenic
GGAGTTACCCCATGGCTGCT+TGG	0.477148	1_2:-48170867	None:intergenic
GCTTCCTGTTGAGTGGGCAT+GGG	0.479296	1_2:+48172519	Msa0074030:three_prime_UTR
TCAAAGTTGTGAAGGTCTCT+GGG	0.485775	1_2:+48172391	Msa0074030:CDS
TGCTGGTTCTTCCCACGCAA+AGG	0.487634	1_2:+48171915	Msa0074030:CDS
TGGTCCTTGTGTGTTGAGCT+CGG	0.488561	1_2:-48170847	None:intergenic
CTCACCGCAGGAGGCAAAGG+TGG	0.491520	1_2:+48171839	Msa0074030:CDS
TAGTTTAGACAACCATCATT+GGG	0.495609	1_2:-48172140	None:intergenic
GCTGGTTCTTCCCACGCAAA+GGG	0.497054	1_2:+48171916	Msa0074030:CDS
ATTGCTGGATTTGGAAGAAA+GGG	0.499669	1_2:+48172336	Msa0074030:CDS
GCGTGGGAAGAACCAGCAAA+AGG	0.504542	1_2:-48171910	None:intergenic
CATACAAGAAGTCTCATCTT+GGG	0.508352	1_2:+48171872	Msa0074030:CDS
GATTGCTGGATTTGGAAGAA+AGG	0.508603	1_2:+48172335	Msa0074030:CDS
AGGGTACAACTAATCAAGAA+TGG	0.513747	1_2:+48172095	Msa0074030:CDS
TATAGGAAGACACATGGAAT+GGG	0.517444	1_2:+48171796	Msa0074030:intron
AAGCCAAGATCTTAGATTTG+TGG	0.520253	1_2:+48172450	Msa0074030:exon
CAGCCCACCTTTGCCTCCTG+CGG	0.522174	1_2:-48171843	None:intergenic
AGTAAGACAACCAGATGATA+GGG	0.524978	1_2:-48172638	None:intergenic
ACACAAGGACCAAGCAGCCA+TGG	0.530103	1_2:+48170858	Msa0074030:exon
CGAGGACAATTCCCTTTGCG+TGG	0.534957	1_2:-48171927	None:intergenic
GATAATTCGAAAATTATGGT+TGG	0.538066	1_2:-48172684	None:intergenic
CACAAGGACCAAGCAGCCAT+GGG	0.544659	1_2:+48170859	Msa0074030:exon
GCAAGCTGAAGTCTCACCGC+AGG	0.557712	1_2:+48171827	Msa0074030:CDS
AGTCTCACCGCAGGAGGCAA+AGG	0.562641	1_2:+48171836	Msa0074030:CDS
GATAGGGAAGATTCACAAGT+AGG	0.567955	1_2:-48172622	None:intergenic
AGCTGAAGTCTCACCGCAGG+AGG	0.569090	1_2:+48171830	Msa0074030:CDS
AGTCTCATCTTGGGAATGAG+TGG	0.571456	1_2:+48171881	Msa0074030:CDS
GAGCAGCAACAGCACCAACA+CGG	0.572129	1_2:-48170807	None:intergenic
ATTCTTGATTAGTTGTACCC+TGG	0.574592	1_2:-48172093	None:intergenic
CTATAGGAAGACACATGGAA+TGG	0.575092	1_2:+48171795	Msa0074030:intron
ACAACTTTGAATCTAACTCC+AGG	0.579252	1_2:-48172378	None:intergenic
GTTGAGCTCGGAGGTTATGG+AGG	0.583331	1_2:-48170835	None:intergenic
TGGAAGAAAGGGTCATGCTG+TGG	0.584767	1_2:+48172347	Msa0074030:CDS
GGAAGAAAGGGTCATGCTGT+GGG	0.588458	1_2:+48172348	Msa0074030:CDS
TCACCGCAGGAGGCAAAGGT+GGG	0.600190	1_2:+48171840	Msa0074030:CDS
AGTTAGATTCAAAGTTGTGA+AGG	0.600905	1_2:+48172383	Msa0074030:CDS
ACAACCATCATTGGGAACAA+AGG	0.603558	1_2:-48172132	None:intergenic
ACCTCCGAGCTCAACACACA+AGG	0.619600	1_2:+48170843	Msa0074030:five_prime_UTR
ATTGTTAACAGAAAATTCAG+TGG	0.620701	1_2:-48172710	None:intergenic
TTATGGTTGGAACTATGTCA+TGG	0.623955	1_2:-48172671	None:intergenic
GAGGACAATTCCCTTTGCGT+GGG	0.632164	1_2:-48171926	None:intergenic
AGCTATTCGTAAGTGTGCCA+GGG	0.637371	1_2:+48172076	Msa0074030:CDS
CTTGTCTATAGGAAGACACA+TGG	0.644023	1_2:+48171790	Msa0074030:intron
TTGAGCTCGGAGGTTATGGA+GGG	0.646209	1_2:-48170834	None:intergenic
CAAAGTTGTGAAGGTCTCTG+GGG	0.715188	1_2:+48172392	Msa0074030:CDS
TCCTTGTGTGTTGAGCTCGG+AGG	0.735284	1_2:-48170844	None:intergenic
ACAAGGACCAAGCAGCCATG+GGG	0.747559	1_2:+48170860	Msa0074030:exon

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTAATTTTGTTAGTATTT+AGG	+	chr1_2:48170991-48171010	Msa0074030:intron	10.0%
!!!	ATTTAATTTTGTTAGTATTT+AGG	+	chr1_2:48170991-48171010	Msa0074030:intron	10.0%
!!!	AATTTGAAACTTGAATATTT+AGG	+	chr1_2:48171272-48171291	Msa0074030:intron	15.0%
!!	ATGAATAATTCATATGTATA+AGG	-	chr1_2:48171407-48171426	None:intergenic	15.0%
!!	TCAAATAAAATTCTAGTAAA+AGG	-	chr1_2:48171985-48172004	None:intergenic	15.0%
!!!	AATTTGAAACTTGAATATTT+AGG	+	chr1_2:48171272-48171291	Msa0074030:intron	15.0%
!!	ATGAATAATTCATATGTATA+AGG	-	chr1_2:48171407-48171426	None:intergenic	15.0%
!!	TCAAATAAAATTCTAGTAAA+AGG	-	chr1_2:48171985-48172004	None:intergenic	15.0%
!!!	TTAGTATTTAGGTTTCATTT+TGG	+	chr1_2:48171002-48171021	Msa0074030:intron	20.0%
!!!	TATTTATATTCGATTTGGAA+CGG	-	chr1_2:48171033-48171052	None:intergenic	20.0%
!!	TAGCATATTTATATTCGATT+TGG	-	chr1_2:48171038-48171057	None:intergenic	20.0%
!!!	CTTTTGTTTAGTTTAGTTTA+TGG	+	chr1_2:48171078-48171097	Msa0074030:intron	20.0%
!!!	ATTTGTTAGTTTATGACTTA+TGG	+	chr1_2:48171168-48171187	Msa0074030:intron	20.0%
!!	TATCTAAAAATGCTATAAGT+TGG	+	chr1_2:48171491-48171510	Msa0074030:intron	20.0%
!!!	GCAAAAATCAACATAATTTT+GGG	-	chr1_2:48172501-48172520	None:intergenic	20.0%
!!!	AGCAAAAATCAACATAATTT+TGG	-	chr1_2:48172502-48172521	None:intergenic	20.0%
!!!	TTTTGTATCTTGTTATTTTG+TGG	+	chr1_2:48172554-48172573	Msa0074030:three_prime_UTR	20.0%
!!!	TTAGTATTTAGGTTTCATTT+TGG	+	chr1_2:48171002-48171021	Msa0074030:intron	20.0%
!!!	TATTTATATTCGATTTGGAA+CGG	-	chr1_2:48171033-48171052	None:intergenic	20.0%
!!	TAGCATATTTATATTCGATT+TGG	-	chr1_2:48171038-48171057	None:intergenic	20.0%
!!!	CTTTTGTTTAGTTTAGTTTA+TGG	+	chr1_2:48171078-48171097	Msa0074030:intron	20.0%
!!!	ATTTGTTAGTTTATGACTTA+TGG	+	chr1_2:48171168-48171187	Msa0074030:intron	20.0%
!!	TATCTAAAAATGCTATAAGT+TGG	+	chr1_2:48171491-48171510	Msa0074030:intron	20.0%
!!!	GCAAAAATCAACATAATTTT+GGG	-	chr1_2:48172501-48172520	None:intergenic	20.0%
!!!	AGCAAAAATCAACATAATTT+TGG	-	chr1_2:48172502-48172521	None:intergenic	20.0%
!!!	TTTTGTATCTTGTTATTTTG+TGG	+	chr1_2:48172554-48172573	Msa0074030:three_prime_UTR	20.0%
!	TTCAATAGAAAATGCAGAAA+AGG	-	chr1_2:48170900-48170919	None:intergenic	25.0%
!!!	TCCTTATGAATATCGATTTT+GGG	-	chr1_2:48170950-48170969	None:intergenic	25.0%
!!!	ATCCTTATGAATATCGATTT+TGG	-	chr1_2:48170951-48170970	None:intergenic	25.0%
!!!	TCTATTTTTTGTTCTTCTTG+TGG	+	chr1_2:48171205-48171224	Msa0074030:intron	25.0%
!	CTGATTAAATTTGTAGTGTT+TGG	+	chr1_2:48171361-48171380	Msa0074030:intron	25.0%
!!!	CTTTTTGTTGTAAATGACTT+AGG	+	chr1_2:48171659-48171678	Msa0074030:intron	25.0%
!!!	GATTGTTGTTTTATTTACAG+TGG	+	chr1_2:48172029-48172048	Msa0074030:intron	25.0%
!!!	TTTTATTTACAGTGGTATTG+AGG	+	chr1_2:48172037-48172056	Msa0074030:intron	25.0%
!!!	ATTTTTTCACACTTACTCTT+AGG	+	chr1_2:48172583-48172602	Msa0074030:three_prime_UTR	25.0%
!	GATAATTCGAAAATTATGGT+TGG	-	chr1_2:48172687-48172706	None:intergenic	25.0%
!!	ACCATAATTTTCGAATTATC+TGG	+	chr1_2:48172687-48172706	Msa0074030:three_prime_UTR	25.0%
!	ATTGTTAACAGAAAATTCAG+TGG	-	chr1_2:48172713-48172732	None:intergenic	25.0%
!	TTCAATAGAAAATGCAGAAA+AGG	-	chr1_2:48170900-48170919	None:intergenic	25.0%
!!!	TCCTTATGAATATCGATTTT+GGG	-	chr1_2:48170950-48170969	None:intergenic	25.0%
!!!	ATCCTTATGAATATCGATTT+TGG	-	chr1_2:48170951-48170970	None:intergenic	25.0%
!!!	TCTATTTTTTGTTCTTCTTG+TGG	+	chr1_2:48171205-48171224	Msa0074030:intron	25.0%
!	CTGATTAAATTTGTAGTGTT+TGG	+	chr1_2:48171361-48171380	Msa0074030:intron	25.0%
!!!	CTTTTTGTTGTAAATGACTT+AGG	+	chr1_2:48171659-48171678	Msa0074030:intron	25.0%
!!!	GATTGTTGTTTTATTTACAG+TGG	+	chr1_2:48172029-48172048	Msa0074030:intron	25.0%
!!!	TTTTATTTACAGTGGTATTG+AGG	+	chr1_2:48172037-48172056	Msa0074030:intron	25.0%
!!!	ATTTTTTCACACTTACTCTT+AGG	+	chr1_2:48172583-48172602	Msa0074030:three_prime_UTR	25.0%
!	GATAATTCGAAAATTATGGT+TGG	-	chr1_2:48172687-48172706	None:intergenic	25.0%
!!	ACCATAATTTTCGAATTATC+TGG	+	chr1_2:48172687-48172706	Msa0074030:three_prime_UTR	25.0%
!	ATTGTTAACAGAAAATTCAG+TGG	-	chr1_2:48172713-48172732	None:intergenic	25.0%
!	AGTTTTCATTTCGGAGATTA+GGG	+	chr1_2:48170774-48170793	Msa0074030:five_prime_UTR	30.0%
!!!	ATGAATATCGATTTTGGGAA+TGG	-	chr1_2:48170945-48170964	None:intergenic	30.0%
	TCCCAAAATCGATATTCATA+AGG	+	chr1_2:48170946-48170965	Msa0074030:intron	30.0%
!!	GTATTTAGGTTTCATTTTGG+TGG	+	chr1_2:48171005-48171024	Msa0074030:intron	30.0%
	TAGTTTATGACTTATGGTAC+TGG	+	chr1_2:48171174-48171193	Msa0074030:intron	30.0%
	GTCTTCAACACTTTGATATT+AGG	+	chr1_2:48171681-48171700	Msa0074030:intron	30.0%
	TTCAACACTTTGATATTAGG+TGG	+	chr1_2:48171684-48171703	Msa0074030:intron	30.0%
	TCAACACTTTGATATTAGGT+GGG	+	chr1_2:48171685-48171704	Msa0074030:intron	30.0%
!	AAATCTTCTGACTTGTCTAT+AGG	+	chr1_2:48171779-48171798	Msa0074030:intron	30.0%
	TAGTTTAGACAACCATCATT+GGG	-	chr1_2:48172143-48172162	None:intergenic	30.0%
!	TCCTTGCTCATATTTTCTAT+TGG	+	chr1_2:48172181-48172200	Msa0074030:intron	30.0%
	ACCAATAGAAAATATGAGCA+AGG	-	chr1_2:48172185-48172204	None:intergenic	30.0%
	TGACTTTAAACTGATATGTC+TGG	+	chr1_2:48172213-48172232	Msa0074030:intron	30.0%
	AGTTAGATTCAAAGTTGTGA+AGG	+	chr1_2:48172383-48172402	Msa0074030:CDS	30.0%
!	ATTCCACAAATCTAAGATCT+TGG	-	chr1_2:48172456-48172475	None:intergenic	30.0%
	AAGATCTTAGATTTGTGGAA+TGG	+	chr1_2:48172455-48172474	Msa0074030:exon	30.0%
	AGATCTTAGATTTGTGGAAT+GGG	+	chr1_2:48172456-48172475	Msa0074030:exon	30.0%
	GCCAGATAATTCGAAAATTA+TGG	-	chr1_2:48172691-48172710	None:intergenic	30.0%
!	AGTTTTCATTTCGGAGATTA+GGG	+	chr1_2:48170774-48170793	Msa0074030:five_prime_UTR	30.0%
!!!	ATGAATATCGATTTTGGGAA+TGG	-	chr1_2:48170945-48170964	None:intergenic	30.0%
	TCCCAAAATCGATATTCATA+AGG	+	chr1_2:48170946-48170965	Msa0074030:intron	30.0%
!!	GTATTTAGGTTTCATTTTGG+TGG	+	chr1_2:48171005-48171024	Msa0074030:intron	30.0%
	TAGTTTATGACTTATGGTAC+TGG	+	chr1_2:48171174-48171193	Msa0074030:intron	30.0%
	GTCTTCAACACTTTGATATT+AGG	+	chr1_2:48171681-48171700	Msa0074030:intron	30.0%
	TTCAACACTTTGATATTAGG+TGG	+	chr1_2:48171684-48171703	Msa0074030:intron	30.0%
	TCAACACTTTGATATTAGGT+GGG	+	chr1_2:48171685-48171704	Msa0074030:intron	30.0%
!	AAATCTTCTGACTTGTCTAT+AGG	+	chr1_2:48171779-48171798	Msa0074030:intron	30.0%
	TAGTTTAGACAACCATCATT+GGG	-	chr1_2:48172143-48172162	None:intergenic	30.0%
!	TCCTTGCTCATATTTTCTAT+TGG	+	chr1_2:48172181-48172200	Msa0074030:intron	30.0%
	ACCAATAGAAAATATGAGCA+AGG	-	chr1_2:48172185-48172204	None:intergenic	30.0%
	TGACTTTAAACTGATATGTC+TGG	+	chr1_2:48172213-48172232	Msa0074030:intron	30.0%
	AGTTAGATTCAAAGTTGTGA+AGG	+	chr1_2:48172383-48172402	Msa0074030:CDS	30.0%
!	ATTCCACAAATCTAAGATCT+TGG	-	chr1_2:48172456-48172475	None:intergenic	30.0%
	AAGATCTTAGATTTGTGGAA+TGG	+	chr1_2:48172455-48172474	Msa0074030:exon	30.0%
	AGATCTTAGATTTGTGGAAT+GGG	+	chr1_2:48172456-48172475	Msa0074030:exon	30.0%
	GCCAGATAATTCGAAAATTA+TGG	-	chr1_2:48172691-48172710	None:intergenic	30.0%
	AAATGCAGAAAAGGCAATGA+AGG	-	chr1_2:48170891-48170910	None:intergenic	35.0%
!!	GATTTTGGGAATGGTTAACA+GGG	-	chr1_2:48170936-48170955	None:intergenic	35.0%
	TTACACAAACCTAATGCCAT+AGG	-	chr1_2:48171143-48171162	None:intergenic	35.0%
	TTTGTTCTTCTTGTGGAACA+TGG	+	chr1_2:48171212-48171231	Msa0074030:intron	35.0%
	TTGTTCTTCTTGTGGAACAT+GGG	+	chr1_2:48171213-48171232	Msa0074030:intron	35.0%
!	AACTGATAAGCTAGCCTATA+GGG	+	chr1_2:48171320-48171339	Msa0074030:intron	35.0%
!	GTAAGCTTCTGAAAAACTGA+CGG	+	chr1_2:48171526-48171545	Msa0074030:intron	35.0%
	TTCACAACTAAGAGTCTGTT+TGG	-	chr1_2:48171615-48171634	None:intergenic	35.0%
	TTTGATATTAGGTGGGAATC+AGG	+	chr1_2:48171692-48171711	Msa0074030:intron	35.0%
	TATAGGAAGACACATGGAAT+GGG	+	chr1_2:48171796-48171815	Msa0074030:intron	35.0%
	TCATACAAGAAGTCTCATCT+TGG	+	chr1_2:48171871-48171890	Msa0074030:CDS	35.0%
	CATACAAGAAGTCTCATCTT+GGG	+	chr1_2:48171872-48171891	Msa0074030:CDS	35.0%
	CACTTACGAATAGCTGAATT+GGG	-	chr1_2:48172071-48172090	None:intergenic	35.0%
	ACACTTACGAATAGCTGAAT+TGG	-	chr1_2:48172072-48172091	None:intergenic	35.0%
!	ATTCTTGATTAGTTGTACCC+TGG	-	chr1_2:48172096-48172115	None:intergenic	35.0%
	AGGGTACAACTAATCAAGAA+TGG	+	chr1_2:48172095-48172114	Msa0074030:CDS	35.0%
	GTAGTTTAGACAACCATCAT+TGG	-	chr1_2:48172144-48172163	None:intergenic	35.0%
!!!	GAAGTTTTGATTGCTGGATT+TGG	+	chr1_2:48172327-48172346	Msa0074030:CDS	35.0%
	ATTGCTGGATTTGGAAGAAA+GGG	+	chr1_2:48172336-48172355	Msa0074030:CDS	35.0%
	ACAACTTTGAATCTAACTCC+AGG	-	chr1_2:48172381-48172400	None:intergenic	35.0%
	AAGCCAAGATCTTAGATTTG+TGG	+	chr1_2:48172450-48172469	Msa0074030:exon	35.0%
!	ATTTTTGCTTCCTGTTGAGT+GGG	+	chr1_2:48172513-48172532	Msa0074030:three_prime_UTR	35.0%
	AGTAAGACAACCAGATGATA+GGG	-	chr1_2:48172641-48172660	None:intergenic	35.0%
!	TGGTTGTCTTACTCGTATTT+TGG	+	chr1_2:48172648-48172667	Msa0074030:three_prime_UTR	35.0%
	TTATGGTTGGAACTATGTCA+TGG	-	chr1_2:48172674-48172693	None:intergenic	35.0%
!!!	CATTGACTTGTTTTGTTGAC+TGG	+	chr1_2:48172763-48172782	Msa0074030:three_prime_UTR	35.0%
	AAATGCAGAAAAGGCAATGA+AGG	-	chr1_2:48170891-48170910	None:intergenic	35.0%
!!	GATTTTGGGAATGGTTAACA+GGG	-	chr1_2:48170936-48170955	None:intergenic	35.0%
	TTACACAAACCTAATGCCAT+AGG	-	chr1_2:48171143-48171162	None:intergenic	35.0%
	TTTGTTCTTCTTGTGGAACA+TGG	+	chr1_2:48171212-48171231	Msa0074030:intron	35.0%
	TTGTTCTTCTTGTGGAACAT+GGG	+	chr1_2:48171213-48171232	Msa0074030:intron	35.0%
!	AACTGATAAGCTAGCCTATA+GGG	+	chr1_2:48171320-48171339	Msa0074030:intron	35.0%
!	GTAAGCTTCTGAAAAACTGA+CGG	+	chr1_2:48171526-48171545	Msa0074030:intron	35.0%
	TTCACAACTAAGAGTCTGTT+TGG	-	chr1_2:48171615-48171634	None:intergenic	35.0%
	TTTGATATTAGGTGGGAATC+AGG	+	chr1_2:48171692-48171711	Msa0074030:intron	35.0%
	TATAGGAAGACACATGGAAT+GGG	+	chr1_2:48171796-48171815	Msa0074030:intron	35.0%
	TCATACAAGAAGTCTCATCT+TGG	+	chr1_2:48171871-48171890	Msa0074030:CDS	35.0%
	CATACAAGAAGTCTCATCTT+GGG	+	chr1_2:48171872-48171891	Msa0074030:CDS	35.0%
	CACTTACGAATAGCTGAATT+GGG	-	chr1_2:48172071-48172090	None:intergenic	35.0%
	ACACTTACGAATAGCTGAAT+TGG	-	chr1_2:48172072-48172091	None:intergenic	35.0%
!	ATTCTTGATTAGTTGTACCC+TGG	-	chr1_2:48172096-48172115	None:intergenic	35.0%
	AGGGTACAACTAATCAAGAA+TGG	+	chr1_2:48172095-48172114	Msa0074030:CDS	35.0%
	GTAGTTTAGACAACCATCAT+TGG	-	chr1_2:48172144-48172163	None:intergenic	35.0%
!!!	GAAGTTTTGATTGCTGGATT+TGG	+	chr1_2:48172327-48172346	Msa0074030:CDS	35.0%
	ATTGCTGGATTTGGAAGAAA+GGG	+	chr1_2:48172336-48172355	Msa0074030:CDS	35.0%
	ACAACTTTGAATCTAACTCC+AGG	-	chr1_2:48172381-48172400	None:intergenic	35.0%
	AAGCCAAGATCTTAGATTTG+TGG	+	chr1_2:48172450-48172469	Msa0074030:exon	35.0%
!	ATTTTTGCTTCCTGTTGAGT+GGG	+	chr1_2:48172513-48172532	Msa0074030:three_prime_UTR	35.0%
	AGTAAGACAACCAGATGATA+GGG	-	chr1_2:48172641-48172660	None:intergenic	35.0%
!	TGGTTGTCTTACTCGTATTT+TGG	+	chr1_2:48172648-48172667	Msa0074030:three_prime_UTR	35.0%
	TTATGGTTGGAACTATGTCA+TGG	-	chr1_2:48172674-48172693	None:intergenic	35.0%
!!!	CATTGACTTGTTTTGTTGAC+TGG	+	chr1_2:48172763-48172782	Msa0074030:three_prime_UTR	35.0%
!!	CGATTTTGGGAATGGTTAAC+AGG	-	chr1_2:48170937-48170956	None:intergenic	40.0%
	CCAGCACATTACATACAGAT+AGG	-	chr1_2:48171112-48171131	None:intergenic	40.0%
	CCTATCTGTATGTAATGTGC+TGG	+	chr1_2:48171109-48171128	Msa0074030:intron	40.0%
	GCTAAGTTTCCTATGGCATT+AGG	+	chr1_2:48171131-48171150	Msa0074030:intron	40.0%
!	GAACTGATAAGCTAGCCTAT+AGG	+	chr1_2:48171319-48171338	Msa0074030:intron	40.0%
!	ACTGATAAGCTAGCCTATAG+GGG	+	chr1_2:48171321-48171340	Msa0074030:intron	40.0%
	TTGACTAAAAAAGACCAGCC+TGG	-	chr1_2:48171555-48171574	None:intergenic	40.0%
	CTTGTCTATAGGAAGACACA+TGG	+	chr1_2:48171790-48171809	Msa0074030:intron	40.0%
	CTATAGGAAGACACATGGAA+TGG	+	chr1_2:48171795-48171814	Msa0074030:intron	40.0%
	TCCTCGAAAAGATGTAAGAG+TGG	+	chr1_2:48171944-48171963	Msa0074030:intron	40.0%
!	ACCACTCTTACATCTTTTCG+AGG	-	chr1_2:48171948-48171967	None:intergenic	40.0%
	GATGTAAGAGTGGTTAAGCT+TGG	+	chr1_2:48171954-48171973	Msa0074030:intron	40.0%
	ACAACCATCATTGGGAACAA+AGG	-	chr1_2:48172135-48172154	None:intergenic	40.0%
	ACACACAATGTCACACAAGA+TGG	-	chr1_2:48172289-48172308	None:intergenic	40.0%
!!!	CAGGATGAAGTTTTGATTGC+TGG	+	chr1_2:48172321-48172340	Msa0074030:intron	40.0%
	GATTGCTGGATTTGGAAGAA+AGG	+	chr1_2:48172335-48172354	Msa0074030:CDS	40.0%
	TTCAAAGTTGTGAAGGTCTC+TGG	+	chr1_2:48172390-48172409	Msa0074030:CDS	40.0%
	TCAAAGTTGTGAAGGTCTCT+GGG	+	chr1_2:48172391-48172410	Msa0074030:CDS	40.0%
	CTCCTTCTTCTCCTTGAAAA+GGG	-	chr1_2:48172430-48172449	None:intergenic	40.0%
	TCTCCTTCTTCTCCTTGAAA+AGG	-	chr1_2:48172431-48172450	None:intergenic	40.0%
!	GATTTTTGCTTCCTGTTGAG+TGG	+	chr1_2:48172512-48172531	Msa0074030:three_prime_UTR	40.0%
	GATAGGGAAGATTCACAAGT+AGG	-	chr1_2:48172625-48172644	None:intergenic	40.0%
	TGTGAATCTTCCCTATCATC+TGG	+	chr1_2:48172628-48172647	Msa0074030:three_prime_UTR	40.0%
	GAGTAAGACAACCAGATGAT+AGG	-	chr1_2:48172642-48172661	None:intergenic	40.0%
	ACTGGTTAACACTCTGTGTT+TGG	+	chr1_2:48172781-48172800	Msa0074030:three_prime_UTR	40.0%
!!	CGATTTTGGGAATGGTTAAC+AGG	-	chr1_2:48170937-48170956	None:intergenic	40.0%
	CCAGCACATTACATACAGAT+AGG	-	chr1_2:48171112-48171131	None:intergenic	40.0%
	CCTATCTGTATGTAATGTGC+TGG	+	chr1_2:48171109-48171128	Msa0074030:intron	40.0%
	GCTAAGTTTCCTATGGCATT+AGG	+	chr1_2:48171131-48171150	Msa0074030:intron	40.0%
!	GAACTGATAAGCTAGCCTAT+AGG	+	chr1_2:48171319-48171338	Msa0074030:intron	40.0%
!	ACTGATAAGCTAGCCTATAG+GGG	+	chr1_2:48171321-48171340	Msa0074030:intron	40.0%
	TTGACTAAAAAAGACCAGCC+TGG	-	chr1_2:48171555-48171574	None:intergenic	40.0%
	CTTGTCTATAGGAAGACACA+TGG	+	chr1_2:48171790-48171809	Msa0074030:intron	40.0%
	CTATAGGAAGACACATGGAA+TGG	+	chr1_2:48171795-48171814	Msa0074030:intron	40.0%
	TCCTCGAAAAGATGTAAGAG+TGG	+	chr1_2:48171944-48171963	Msa0074030:intron	40.0%
!	ACCACTCTTACATCTTTTCG+AGG	-	chr1_2:48171948-48171967	None:intergenic	40.0%
	GATGTAAGAGTGGTTAAGCT+TGG	+	chr1_2:48171954-48171973	Msa0074030:intron	40.0%
	ACAACCATCATTGGGAACAA+AGG	-	chr1_2:48172135-48172154	None:intergenic	40.0%
	ACACACAATGTCACACAAGA+TGG	-	chr1_2:48172289-48172308	None:intergenic	40.0%
!!!	CAGGATGAAGTTTTGATTGC+TGG	+	chr1_2:48172321-48172340	Msa0074030:intron	40.0%
	GATTGCTGGATTTGGAAGAA+AGG	+	chr1_2:48172335-48172354	Msa0074030:CDS	40.0%
	TTCAAAGTTGTGAAGGTCTC+TGG	+	chr1_2:48172390-48172409	Msa0074030:CDS	40.0%
	TCAAAGTTGTGAAGGTCTCT+GGG	+	chr1_2:48172391-48172410	Msa0074030:CDS	40.0%
	CTCCTTCTTCTCCTTGAAAA+GGG	-	chr1_2:48172430-48172449	None:intergenic	40.0%
	TCTCCTTCTTCTCCTTGAAA+AGG	-	chr1_2:48172431-48172450	None:intergenic	40.0%
!	GATTTTTGCTTCCTGTTGAG+TGG	+	chr1_2:48172512-48172531	Msa0074030:three_prime_UTR	40.0%
	GATAGGGAAGATTCACAAGT+AGG	-	chr1_2:48172625-48172644	None:intergenic	40.0%
	TGTGAATCTTCCCTATCATC+TGG	+	chr1_2:48172628-48172647	Msa0074030:three_prime_UTR	40.0%
	GAGTAAGACAACCAGATGAT+AGG	-	chr1_2:48172642-48172661	None:intergenic	40.0%
	ACTGGTTAACACTCTGTGTT+TGG	+	chr1_2:48172781-48172800	Msa0074030:three_prime_UTR	40.0%
!!	TGTGCTGGCTAAGTTTCCTA+TGG	+	chr1_2:48171124-48171143	Msa0074030:intron	45.0%
	AGTCTCATCTTGGGAATGAG+TGG	+	chr1_2:48171881-48171900	Msa0074030:CDS	45.0%
!	GAGTGGAAGAAACCTTTTGC+TGG	+	chr1_2:48171898-48171917	Msa0074030:CDS	45.0%
	AGCTATTCGTAAGTGTGCCA+GGG	+	chr1_2:48172076-48172095	Msa0074030:CDS	45.0%
	GTGACATTGTGTGTGACTGA+TGG	+	chr1_2:48172295-48172314	Msa0074030:intron	45.0%
	CAAAGTTGTGAAGGTCTCTG+GGG	+	chr1_2:48172392-48172411	Msa0074030:CDS	45.0%
!	GTCTCTTCTTGCCCTTTTCA+AGG	+	chr1_2:48172416-48172435	Msa0074030:CDS	45.0%
!!	TGCCCTTTTCAAGGAGAAGA+AGG	+	chr1_2:48172425-48172444	Msa0074030:CDS	45.0%
!!	TGTGCTGGCTAAGTTTCCTA+TGG	+	chr1_2:48171124-48171143	Msa0074030:intron	45.0%
	AGTCTCATCTTGGGAATGAG+TGG	+	chr1_2:48171881-48171900	Msa0074030:CDS	45.0%
!	GAGTGGAAGAAACCTTTTGC+TGG	+	chr1_2:48171898-48171917	Msa0074030:CDS	45.0%
	AGCTATTCGTAAGTGTGCCA+GGG	+	chr1_2:48172076-48172095	Msa0074030:CDS	45.0%
	GTGACATTGTGTGTGACTGA+TGG	+	chr1_2:48172295-48172314	Msa0074030:intron	45.0%
	CAAAGTTGTGAAGGTCTCTG+GGG	+	chr1_2:48172392-48172411	Msa0074030:CDS	45.0%
!	GTCTCTTCTTGCCCTTTTCA+AGG	+	chr1_2:48172416-48172435	Msa0074030:CDS	45.0%
!!	TGCCCTTTTCAAGGAGAAGA+AGG	+	chr1_2:48172425-48172444	Msa0074030:CDS	45.0%
!	AGGGTTTTCGTCTTCCGTGT+TGG	+	chr1_2:48170793-48170812	Msa0074030:five_prime_UTR	50.0%
	TTGAGCTCGGAGGTTATGGA+GGG	-	chr1_2:48170837-48170856	None:intergenic	50.0%
	TGTGTTGAGCTCGGAGGTTA+TGG	-	chr1_2:48170841-48170860	None:intergenic	50.0%
	TGGTCCTTGTGTGTTGAGCT+CGG	-	chr1_2:48170850-48170869	None:intergenic	50.0%
	GCAATGAAGGAGTTACCCCA+TGG	-	chr1_2:48170878-48170897	None:intergenic	50.0%
	CCAATCAGCTCATCCCCTAT+AGG	-	chr1_2:48171337-48171356	None:intergenic	50.0%
	CCTATAGGGGATGAGCTGAT+TGG	+	chr1_2:48171334-48171353	Msa0074030:intron	50.0%
	CTGAAAAACTGACGGTCACC+AGG	+	chr1_2:48171534-48171553	Msa0074030:intron	50.0%
	GAGGACAATTCCCTTTGCGT+GGG	-	chr1_2:48171929-48171948	None:intergenic	50.0%
	CAGCTATTCGTAAGTGTGCC+AGG	+	chr1_2:48172075-48172094	Msa0074030:CDS	50.0%
	GCTGCCTTTGTTCCCAATGA+TGG	+	chr1_2:48172128-48172147	Msa0074030:CDS	50.0%
	TGTGTGTGACTGATGGTTGC+AGG	+	chr1_2:48172302-48172321	Msa0074030:intron	50.0%
	TGGAAGAAAGGGTCATGCTG+TGG	+	chr1_2:48172347-48172366	Msa0074030:CDS	50.0%
	GGAAGAAAGGGTCATGCTGT+GGG	+	chr1_2:48172348-48172367	Msa0074030:CDS	50.0%
	CATGCTGTGGGAGATATTCC+TGG	+	chr1_2:48172360-48172379	Msa0074030:CDS	50.0%
!	AGGGTTTTCGTCTTCCGTGT+TGG	+	chr1_2:48170793-48170812	Msa0074030:five_prime_UTR	50.0%
	TTGAGCTCGGAGGTTATGGA+GGG	-	chr1_2:48170837-48170856	None:intergenic	50.0%
	TGTGTTGAGCTCGGAGGTTA+TGG	-	chr1_2:48170841-48170860	None:intergenic	50.0%
	TGGTCCTTGTGTGTTGAGCT+CGG	-	chr1_2:48170850-48170869	None:intergenic	50.0%
	GCAATGAAGGAGTTACCCCA+TGG	-	chr1_2:48170878-48170897	None:intergenic	50.0%
	CCAATCAGCTCATCCCCTAT+AGG	-	chr1_2:48171337-48171356	None:intergenic	50.0%
	CCTATAGGGGATGAGCTGAT+TGG	+	chr1_2:48171334-48171353	Msa0074030:intron	50.0%
	CTGAAAAACTGACGGTCACC+AGG	+	chr1_2:48171534-48171553	Msa0074030:intron	50.0%
	GAGGACAATTCCCTTTGCGT+GGG	-	chr1_2:48171929-48171948	None:intergenic	50.0%
	CAGCTATTCGTAAGTGTGCC+AGG	+	chr1_2:48172075-48172094	Msa0074030:CDS	50.0%
	GCTGCCTTTGTTCCCAATGA+TGG	+	chr1_2:48172128-48172147	Msa0074030:CDS	50.0%
	TGTGTGTGACTGATGGTTGC+AGG	+	chr1_2:48172302-48172321	Msa0074030:intron	50.0%
	TGGAAGAAAGGGTCATGCTG+TGG	+	chr1_2:48172347-48172366	Msa0074030:CDS	50.0%
	GGAAGAAAGGGTCATGCTGT+GGG	+	chr1_2:48172348-48172367	Msa0074030:CDS	50.0%
	CATGCTGTGGGAGATATTCC+TGG	+	chr1_2:48172360-48172379	Msa0074030:CDS	50.0%
	GAGCAGCAACAGCACCAACA+CGG	-	chr1_2:48170810-48170829	None:intergenic	55.0%
	GTTGAGCTCGGAGGTTATGG+AGG	-	chr1_2:48170838-48170857	None:intergenic	55.0%
	ACCTCCGAGCTCAACACACA+AGG	+	chr1_2:48170843-48170862	Msa0074030:five_prime_UTR	55.0%
	TCCTTGTGTGTTGAGCTCGG+AGG	-	chr1_2:48170847-48170866	None:intergenic	55.0%
	ACACAAGGACCAAGCAGCCA+TGG	+	chr1_2:48170858-48170877	Msa0074030:exon	55.0%
	CACAAGGACCAAGCAGCCAT+GGG	+	chr1_2:48170859-48170878	Msa0074030:exon	55.0%
	ACAAGGACCAAGCAGCCATG+GGG	+	chr1_2:48170860-48170879	Msa0074030:exon	55.0%
	AAAACTGACGGTCACCAGGC+TGG	+	chr1_2:48171538-48171557	Msa0074030:intron	55.0%
	GCGTGGGAAGAACCAGCAAA+AGG	-	chr1_2:48171913-48171932	None:intergenic	55.0%
!!	TGCTGGTTCTTCCCACGCAA+AGG	+	chr1_2:48171915-48171934	Msa0074030:CDS	55.0%
!	GCTGGTTCTTCCCACGCAAA+GGG	+	chr1_2:48171916-48171935	Msa0074030:CDS	55.0%
	CGAGGACAATTCCCTTTGCG+TGG	-	chr1_2:48171930-48171949	None:intergenic	55.0%
	TGCTTCCTGTTGAGTGGGCA+TGG	+	chr1_2:48172518-48172537	Msa0074030:three_prime_UTR	55.0%
	GCTTCCTGTTGAGTGGGCAT+GGG	+	chr1_2:48172519-48172538	Msa0074030:three_prime_UTR	55.0%
	AATGCCCATGCCCACTCAAC+AGG	-	chr1_2:48172526-48172545	None:intergenic	55.0%
	GAGCAGCAACAGCACCAACA+CGG	-	chr1_2:48170810-48170829	None:intergenic	55.0%
	GTTGAGCTCGGAGGTTATGG+AGG	-	chr1_2:48170838-48170857	None:intergenic	55.0%
	ACCTCCGAGCTCAACACACA+AGG	+	chr1_2:48170843-48170862	Msa0074030:five_prime_UTR	55.0%
	TCCTTGTGTGTTGAGCTCGG+AGG	-	chr1_2:48170847-48170866	None:intergenic	55.0%
	ACACAAGGACCAAGCAGCCA+TGG	+	chr1_2:48170858-48170877	Msa0074030:exon	55.0%
	CACAAGGACCAAGCAGCCAT+GGG	+	chr1_2:48170859-48170878	Msa0074030:exon	55.0%
	ACAAGGACCAAGCAGCCATG+GGG	+	chr1_2:48170860-48170879	Msa0074030:exon	55.0%
	AAAACTGACGGTCACCAGGC+TGG	+	chr1_2:48171538-48171557	Msa0074030:intron	55.0%
	GCGTGGGAAGAACCAGCAAA+AGG	-	chr1_2:48171913-48171932	None:intergenic	55.0%
!!	TGCTGGTTCTTCCCACGCAA+AGG	+	chr1_2:48171915-48171934	Msa0074030:CDS	55.0%
!	GCTGGTTCTTCCCACGCAAA+GGG	+	chr1_2:48171916-48171935	Msa0074030:CDS	55.0%
	CGAGGACAATTCCCTTTGCG+TGG	-	chr1_2:48171930-48171949	None:intergenic	55.0%
	TGCTTCCTGTTGAGTGGGCA+TGG	+	chr1_2:48172518-48172537	Msa0074030:three_prime_UTR	55.0%
	GCTTCCTGTTGAGTGGGCAT+GGG	+	chr1_2:48172519-48172538	Msa0074030:three_prime_UTR	55.0%
	AATGCCCATGCCCACTCAAC+AGG	-	chr1_2:48172526-48172545	None:intergenic	55.0%
	GGAGTTACCCCATGGCTGCT+TGG	-	chr1_2:48170870-48170889	None:intergenic	60.0%
	GCAAGCTGAAGTCTCACCGC+AGG	+	chr1_2:48171827-48171846	Msa0074030:CDS	60.0%
	AGCTGAAGTCTCACCGCAGG+AGG	+	chr1_2:48171830-48171849	Msa0074030:CDS	60.0%
	AGTCTCACCGCAGGAGGCAA+AGG	+	chr1_2:48171836-48171855	Msa0074030:CDS	60.0%
	TCACCGCAGGAGGCAAAGGT+GGG	+	chr1_2:48171840-48171859	Msa0074030:CDS	60.0%
	GGAGTTACCCCATGGCTGCT+TGG	-	chr1_2:48170870-48170889	None:intergenic	60.0%
	GCAAGCTGAAGTCTCACCGC+AGG	+	chr1_2:48171827-48171846	Msa0074030:CDS	60.0%
	AGCTGAAGTCTCACCGCAGG+AGG	+	chr1_2:48171830-48171849	Msa0074030:CDS	60.0%
	AGTCTCACCGCAGGAGGCAA+AGG	+	chr1_2:48171836-48171855	Msa0074030:CDS	60.0%
	TCACCGCAGGAGGCAAAGGT+GGG	+	chr1_2:48171840-48171859	Msa0074030:CDS	60.0%
	CTCACCGCAGGAGGCAAAGG+TGG	+	chr1_2:48171839-48171858	Msa0074030:CDS	65.0%
	CAGCCCACCTTTGCCTCCTG+CGG	-	chr1_2:48171846-48171865	None:intergenic	65.0%
	CTCACCGCAGGAGGCAAAGG+TGG	+	chr1_2:48171839-48171858	Msa0074030:CDS	65.0%
	CAGCCCACCTTTGCCTCCTG+CGG	-	chr1_2:48171846-48171865	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	48170774	48172830	48170774	ID=Msa0074030;Name=Msa0074030
chr1_2	mRNA	48170774	48172830	48170774	ID=Msa0074030-mRNA-1;Parent=Msa0074030;Name=Msa0074030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=103\|1\|1\|1\|1\|1\|4\|366\|142
chr1_2	exon	48170774	48170881	48170774	ID=Msa0074030-mRNA-1:exon:14620;Parent=Msa0074030-mRNA-1
chr1_2	exon	48171801	48171956	48171801	ID=Msa0074030-mRNA-1:exon:14621;Parent=Msa0074030-mRNA-1
chr1_2	exon	48172049	48172175	48172049	ID=Msa0074030-mRNA-1:exon:14622;Parent=Msa0074030-mRNA-1
chr1_2	exon	48172324	48172830	48172324	ID=Msa0074030-mRNA-1:exon:14623;Parent=Msa0074030-mRNA-1
chr1_2	five_prime_UTR	48170774	48170876	48170774	ID=Msa0074030-mRNA-1:five_prime_utr;Parent=Msa0074030-mRNA-1
chr1_2	CDS	48170877	48170881	48170877	ID=Msa0074030-mRNA-1:cds;Parent=Msa0074030-mRNA-1
chr1_2	CDS	48171801	48171956	48171801	ID=Msa0074030-mRNA-1:cds;Parent=Msa0074030-mRNA-1
chr1_2	CDS	48172049	48172175	48172049	ID=Msa0074030-mRNA-1:cds;Parent=Msa0074030-mRNA-1
chr1_2	CDS	48172324	48172464	48172324	ID=Msa0074030-mRNA-1:cds;Parent=Msa0074030-mRNA-1
chr1_2	three_prime_UTR	48172465	48172830	48172465	ID=Msa0074030-mRNA-1:three_prime_utr;Parent=Msa0074030-mRNA-1

Gene Sequence

>Msa0074030

ATGGGGAAGACACATGGAATGGGAGCTGCTCGCAAGCTGAAGTCTCACCGCAGGAGGCAAAGGTGGGCTGACAAGTCATACAAGAAGTCTCATCTTGGGAATGAGTGGAAGAAACCTTTTGCTGGTTCTTCCCACGCAAAGGGAATTGTCCTCGAAAAGATTGGTATTGAGGCTAAACAGCCCAATTCAGCTATTCGTAAGTGTGCCAGGGTACAACTAATCAAGAATGGAAAGAAAATTGCTGCCTTTGTTCCCAATGATGGTTGTCTAAACTACATCGAAGAAAATGATGAAGTTTTGATTGCTGGATTTGGAAGAAAGGGTCATGCTGTGGGAGATATTCCTGGAGTTAGATTCAAAGTTGTGAAGGTCTCTGGGGTGTCTCTTCTTGCCCTTTTCAAGGAGAAGAAGGAGAAGCCAAGATCTTAG

Protein sequence

>Msa0074030

MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS*