AlfalfaGEDB | Msa0173530

M. sativa cultivar zhongmu-4 / Msa0173530

KEGG: K02973
GO: -
PFAM: PF00164.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173530	RZB48484.1	100.000	142	0	0	1	142	97	238	2.72e-98	292

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173530	sp\|Q9M5Z9\|RS23_EUPES	99.296	142	1	0	1	142	1	142	4.61e-100	286

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173530	A0A445FI55	100.000	142	0	0	1	142	97	238	1.30e-98	292

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002750	Msa0173530	0.881019	3.397319e-70	-8.615850e-47
Msa0002790	Msa0173530	0.902320	1.093259e-78	-8.615850e-47
Msa0003780	Msa0173530	0.800496	1.402703e-48	-8.615850e-47
Msa0022970	Msa0173530	0.897141	1.873637e-76	-8.615850e-47
Msa0027260	Msa0173530	0.844292	8.274509e-59	-8.615850e-47
Msa0029180	Msa0173530	0.804714	1.892013e-49	-8.615850e-47
Msa0032780	Msa0173530	0.822532	2.252071e-53	-8.615850e-47
Msa0032810	Msa0173530	0.836579	8.614414e-57	-8.615850e-47
Msa0040690	Msa0173530	0.811615	6.406053e-51	-8.615850e-47
Msa0042280	Msa0173530	0.806303	8.782542e-50	-8.615850e-47
Msa0042480	Msa0173530	0.803224	3.861071e-49	-8.615850e-47
Msa0044890	Msa0173530	0.814764	1.304849e-51	-8.615850e-47
Msa0045730	Msa0173530	0.848015	8.021533e-60	-8.615850e-47
Msa0047160	Msa0173530	0.843581	1.283293e-58	-8.615850e-47
Msa0048180	Msa0173530	0.862219	5.916200e-64	-8.615850e-47
Msa0055180	Msa0173530	0.801094	1.058885e-48	-8.615850e-47
Msa0060990	Msa0173530	0.805425	1.343129e-49	-8.615850e-47
Msa0068970	Msa0173530	0.815239	1.023768e-51	-8.615850e-47
Msa0074030	Msa0173530	0.959113	4.374956e-117	-8.615850e-47
Msa0074320	Msa0173530	0.810776	9.740125e-51	-8.615850e-47
Msa0076040	Msa0173530	0.804320	2.285498e-49	-8.615850e-47
Msa0077530	Msa0173530	0.833351	5.605571e-56	-8.615850e-47
Msa0085780	Msa0173530	0.832069	1.166460e-55	-8.615850e-47
Msa0086750	Msa0173530	0.844700	6.426289e-59	-8.615850e-47
Msa0091880	Msa0173530	0.811333	7.379928e-51	-8.615850e-47
Msa0094470	Msa0173530	0.833850	4.208475e-56	-8.615850e-47
Msa0097600	Msa0173530	0.809269	2.056796e-50	-8.615850e-47
Msa0116130	Msa0173530	0.893252	7.471302e-75	-8.615850e-47
Msa0116670	Msa0173530	0.999403	6.472640e-309	-8.615850e-47
Msa0118710	Msa0173530	0.874548	6.197038e-68	-8.615850e-47
Msa0128860	Msa0173530	0.859944	2.913437e-63	-8.615850e-47
Msa0129660	Msa0173530	0.817238	3.657843e-52	-8.615850e-47
Msa0133540	Msa0173530	0.903745	2.525180e-79	-8.615850e-47
Msa0146340	Msa0173530	0.827694	1.358277e-54	-8.615850e-47
Msa0163760	Msa0173530	0.822667	2.095284e-53	-8.615850e-47
Msa0167480	Msa0173530	0.876818	1.032126e-68	-8.615850e-47
Msa0172900	Msa0173530	0.826017	3.415954e-54	-8.615850e-47
Msa0173530	Msa0174730	0.857423	1.648777e-62	-8.615850e-47
Msa0173530	Msa0180020	0.828961	6.717301e-55	-8.615850e-47
Msa0173530	Msa0181490	0.894259	2.918958e-75	-8.615850e-47
Msa0173530	Msa0181610	0.811973	5.355392e-51	-8.615850e-47
Msa0173530	Msa0183090	0.810720	1.001704e-50	-8.615850e-47
Msa0173530	Msa0187690	0.809322	2.003912e-50	-8.615850e-47
Msa0173530	Msa0187930	0.848561	5.666107e-60	-8.615850e-47
Msa0173530	Msa0188350	0.809895	1.508960e-50	-8.615850e-47
Msa0173530	Msa0189700	0.833337	5.650321e-56	-8.615850e-47
Msa0173530	Msa0192230	0.800960	1.127551e-48	-8.615850e-47
Msa0173530	Msa0194540	0.848651	5.349533e-60	-8.615850e-47
Msa0173530	Msa0202020	0.826483	2.646085e-54	-8.615850e-47
Msa0173530	Msa0210360	0.888656	4.863279e-73	-8.615850e-47
Msa0173530	Msa0218720	0.814493	1.497816e-51	-8.615850e-47
Msa0173530	Msa0218830	0.908285	2.020207e-81	-8.615850e-47
Msa0173530	Msa0219120	0.855542	5.885151e-62	-8.615850e-47
Msa0173530	Msa0221030	0.901062	3.915430e-78	-8.615850e-47
Msa0173530	Msa0222730	0.835885	1.292946e-56	-8.615850e-47
Msa0173530	Msa0230490	0.879211	1.500022e-69	-8.615850e-47
Msa0173530	Msa0230520	0.828233	1.007421e-54	-8.615850e-47
Msa0173530	Msa0231100	0.861888	7.474683e-64	-8.615850e-47
Msa0173530	Msa0232010	0.827050	1.937619e-54	-8.615850e-47
Msa0173530	Msa0232080	0.828733	7.630445e-55	-8.615850e-47
Msa0173530	Msa0244780	0.853486	2.315344e-61	-8.615850e-47
Msa0173530	Msa0250820	0.800769	1.233609e-48	-8.615850e-47
Msa0173530	Msa0257450	0.832682	8.221658e-56	-8.615850e-47
Msa0173530	Msa0258850	0.849581	2.950781e-60	-8.615850e-47
Msa0173530	Msa0262480	0.888222	7.149171e-73	-8.615850e-47
Msa0173530	Msa0264010	0.848455	6.064685e-60	-8.615850e-47
Msa0173530	Msa0268130	0.842336	2.751212e-58	-8.615850e-47
Msa0173530	Msa0269180	0.838758	2.377389e-57	-8.615850e-47
Msa0173530	Msa0289580	0.858997	5.606444e-63	-8.615850e-47
Msa0173530	Msa0289610	0.873236	1.719674e-67	-8.615850e-47
Msa0173530	Msa0296250	0.814610	1.411038e-51	-8.615850e-47
Msa0173530	Msa0296720	0.812206	4.763622e-51	-8.615850e-47
Msa0173530	Msa0297830	0.848324	6.592341e-60	-8.615850e-47
Msa0173530	Msa0298200	0.851099	1.106101e-60	-8.615850e-47
Msa0173530	Msa0298990	0.844071	9.487174e-59	-8.615850e-47
Msa0173530	Msa0300350	0.899586	1.711477e-77	-8.615850e-47
Msa0173530	Msa0306690	0.891866	2.686561e-74	-8.615850e-47
Msa0173530	Msa0313100	0.806081	9.779055e-50	-8.615850e-47
Msa0173530	Msa0317910	0.816567	5.173746e-52	-8.615850e-47
Msa0173530	Msa0327300	0.889767	1.802913e-73	-8.615850e-47
Msa0173530	Msa0327330	0.841316	5.116482e-58	-8.615850e-47
Msa0173530	Msa0335840	0.850421	1.717258e-60	-8.615850e-47
Msa0173530	Msa0336010	0.803838	2.879166e-49	-8.615850e-47
Msa0173530	Msa0348830	0.878620	2.423844e-69	-8.615850e-47
Msa0173530	Msa0348990	0.809517	1.819408e-50	-8.615850e-47
Msa0173530	Msa0359040	0.816666	4.916739e-52	-8.615850e-47
Msa0173530	Msa0369450	0.808503	3.000088e-50	-8.615850e-47
Msa0173530	Msa0393370	0.803730	3.032204e-49	-8.615850e-47
Msa0173530	Msa0434920	0.804012	2.649391e-49	-8.615850e-47
Msa0173530	Msa0443390	0.898266	6.277830e-77	-8.615850e-47
Msa0173530	Msa0471880	0.831733	1.412196e-55	-8.615850e-47
Msa0173530	Msa0481850	0.837766	4.283550e-57	-8.615850e-47
Msa0173530	Msa0483110	0.838133	3.445501e-57	-8.615850e-47
Msa0173530	Msa0486070	0.827603	1.428293e-54	-8.615850e-47
Msa0173530	Msa0488820	0.807397	5.157109e-50	-8.615850e-47
Msa0173530	Msa0526540	0.886684	2.760124e-72	-8.615850e-47
Msa0173530	Msa0527150	0.843041	1.787910e-58	-8.615850e-47
Msa0173530	Msa0531650	0.818201	2.217761e-52	-8.615850e-47
Msa0173530	Msa0534750	0.843851	1.086375e-58	-8.615850e-47
Msa0173530	Msa0571920	0.845397	4.167278e-59	-8.615850e-47
Msa0173530	Msa0576940	0.883257	5.228046e-71	-8.615850e-47
Msa0173530	Msa0581110	0.833046	6.676049e-56	-8.615850e-47
Msa0173530	Msa0584030	0.830496	2.842363e-55	-8.615850e-47
Msa0173530	Msa0584260	0.823382	1.427846e-53	-8.615850e-47
Msa0173530	Msa0586420	0.825910	3.623050e-54	-8.615850e-47
Msa0173530	Msa0588360	0.843533	1.321966e-58	-8.615850e-47
Msa0173530	Msa0603320	0.837378	5.385427e-57	-8.615850e-47
Msa0173530	Msa0615440	0.807667	4.519244e-50	-8.615850e-47
Msa0173530	Msa0615580	0.886815	2.462009e-72	-8.615850e-47
Msa0173530	Msa0621950	0.830794	2.402085e-55	-8.615850e-47
Msa0173530	Msa0622750	0.842803	2.068148e-58	-8.615850e-47
Msa0173530	Msa0623200	0.858989	5.640618e-63	-8.615850e-47
Msa0173530	Msa0631250	0.839558	1.474957e-57	-8.615850e-47
Msa0173530	Msa0654870	0.827724	1.335625e-54	-8.615850e-47
Msa0173530	Msa0661300	0.816710	4.807048e-52	-8.615850e-47
Msa0173530	Msa0666230	0.875593	2.725995e-68	-8.615850e-47
Msa0173530	Msa0687870	0.803153	3.993037e-49	-8.615850e-47
Msa0173530	Msa0698490	0.808066	3.716783e-50	-8.615850e-47
Msa0173530	Msa0698660	0.808764	2.638251e-50	-8.615850e-47
Msa0173530	Msa0698780	0.826185	3.116614e-54	-8.615850e-47
Msa0173530	Msa0705800	0.813966	1.958885e-51	-8.615850e-47
Msa0173530	Msa0709780	0.821068	4.914840e-53	-8.615850e-47
Msa0173530	Msa0712610	0.856181	3.825988e-62	-8.615850e-47
Msa0173530	Msa0717380	0.864629	1.060082e-64	-8.615850e-47
Msa0173530	Msa0719420	0.826265	2.982518e-54	-8.615850e-47
Msa0173530	Msa0729200	0.905164	5.729988e-80	-8.615850e-47
Msa0173530	Msa0738100	0.856325	3.472573e-62	-8.615850e-47
Msa0173530	Msa0752910	0.808298	3.317394e-50	-8.615850e-47
Msa0173530	Msa0756250	0.819858	9.313886e-53	-8.615850e-47
Msa0173530	Msa0766080	0.840028	1.112929e-57	-8.615850e-47
Msa0173530	Msa0769590	0.908419	1.746211e-81	-8.615850e-47
Msa0173530	Msa0780490	0.817777	2.765852e-52	-8.615850e-47
Msa0173530	Msa0781080	0.837152	6.151386e-57	-8.615850e-47
Msa0173530	Msa0783630	0.842419	2.615577e-58	-8.615850e-47
Msa0173530	Msa0785130	0.902400	1.008162e-78	-8.615850e-47
Msa0173530	Msa0789680	0.825371	4.862078e-54	-8.615850e-47
Msa0173530	Msa0792420	0.800515	1.390323e-48	-8.615850e-47
Msa0173530	Msa0799830	0.829747	4.330633e-55	-8.615850e-47
Msa0173530	Msa0802410	0.803305	3.713731e-49	-8.615850e-47
Msa0173530	Msa0806880	0.912065	2.983866e-83	-8.615850e-47
Msa0173530	Msa0817540	0.893993	3.744694e-75	-8.615850e-47
Msa0173530	Msa0827380	0.833951	3.970822e-56	-8.615850e-47
Msa0173530	Msa0830090	0.806466	8.116524e-50	-8.615850e-47
Msa0173530	Msa0844220	-0.831093	2.029337e-55	-8.615850e-47
Msa0173530	Msa0867060	0.834742	2.514246e-56	-8.615850e-47
Msa0173530	Msa0876170	0.854332	1.320443e-61	-8.615850e-47
Msa0173530	Msa0881290	0.834665	2.628646e-56	-8.615850e-47
Msa0173530	Msa0888810	0.848894	4.581134e-60	-8.615850e-47
Msa0173530	Msa0913240	0.812516	4.076374e-51	-8.615850e-47
Msa0173530	Msa0930490	0.822092	2.850416e-53	-8.615850e-47
Msa0173530	Msa0945480	0.868359	6.923773e-66	-8.615850e-47
Msa0173530	Msa0953310	0.846204	2.515615e-59	-8.615850e-47
Msa0173530	Msa0970110	0.806921	6.502546e-50	-8.615850e-47
Msa0173530	Msa1006840	0.827296	1.692270e-54	-8.615850e-47
Msa0173530	Msa1019240	0.898126	7.196782e-77	-8.615850e-47
Msa0173530	Msa1019260	0.903867	2.224575e-79	-8.615850e-47
Msa0173530	Msa1037290	0.822650	2.115168e-53	-8.615850e-47
Msa0173530	Msa1039520	0.849929	2.357631e-60	-8.615850e-47
Msa0173530	Msa1072710	0.869840	2.289671e-66	-8.615850e-47
Msa0173530	Msa1078870	0.879227	1.480149e-69	-8.615850e-47
Msa0173530	Msa1078980	0.836351	9.845734e-57	-8.615850e-47
Msa0173530	Msa1080350	0.855078	8.029156e-62	-8.615850e-47
Msa0173530	Msa1081150	0.809623	1.726959e-50	-8.615850e-47
Msa0173530	Msa1088490	0.853549	2.220360e-61	-8.615850e-47
Msa0173530	Msa1100710	0.835496	1.622158e-56	-8.615850e-47
Msa0173530	Msa1104140	0.858413	8.380029e-63	-8.615850e-47
Msa0173530	Msa1104210	0.897883	9.122013e-77	-8.615850e-47
Msa0173530	Msa1122820	0.812345	4.443211e-51	-8.615850e-47
Msa0173530	Msa1125860	0.853531	2.246407e-61	-8.615850e-47
Msa0173530	Msa1126060	0.850608	1.520966e-60	-8.615850e-47
Msa0173530	Msa1126470	0.835015	2.146235e-56	-8.615850e-47
Msa0173530	Msa1126510	0.846309	2.354813e-59	-8.615850e-47
Msa0173530	Msa1126520	0.813948	1.976500e-51	-8.615850e-47
Msa0173530	Msa1126830	0.837242	5.835793e-57	-8.615850e-47
Msa0173530	Msa1135890	0.816429	5.555378e-52	-8.615850e-47
Msa0173530	Msa1138870	0.810114	1.353574e-50	-8.615850e-47
Msa0173530	Msa1165780	0.845782	3.276151e-59	-8.615850e-47
Msa0173530	Msa1166860	0.853950	1.702025e-61	-8.615850e-47
Msa0173530	Msa1166870	0.886204	4.190943e-72	-8.615850e-47
Msa0173530	Msa1167540	0.859166	4.990339e-63	-8.615850e-47
Msa0173530	Msa1169180	0.840340	9.224135e-58	-8.615850e-47
Msa0173530	Msa1179980	0.800924	1.147295e-48	-8.615850e-47
Msa0173530	Msa1183450	0.836059	1.168124e-56	-8.615850e-47
Msa0173530	Msa1186980	0.816270	6.028598e-52	-8.615850e-47
Msa0173530	Msa1188260	0.803845	2.870160e-49	-8.615850e-47
Msa0173530	Msa1195300	0.829621	4.647276e-55	-8.615850e-47
Msa0173530	Msa1208020	0.820537	6.509111e-53	-8.615850e-47
Msa0173530	Msa1215820	0.879104	1.635420e-69	-8.615850e-47
Msa0173530	Msa1230580	0.821945	3.082188e-53	-8.615850e-47
Msa0173530	Msa1241190	0.833510	5.117301e-56	-8.615850e-47
Msa0173530	Msa1257510	0.835614	1.514338e-56	-8.615850e-47
Msa0173530	Msa1258710	0.812532	4.043398e-51	-8.615850e-47
Msa0173530	Msa1260530	0.853447	2.375884e-61	-8.615850e-47
Msa0173530	Msa1262890	0.805967	1.033730e-49	-8.615850e-47
Msa0173530	Msa1265630	0.841271	5.256278e-58	-8.615850e-47
Msa0173530	Msa1266060	0.831996	1.215965e-55	-8.615850e-47
Msa0173530	Msa1270620	0.803183	3.935943e-49	-8.615850e-47
Msa0173530	Msa1273340	0.817991	2.474436e-52	-8.615850e-47
Msa0173530	Msa1295150	0.809920	1.490429e-50	-8.615850e-47
Msa0173530	Msa1299590	0.843955	1.019321e-58	-8.615850e-47
Msa0173530	Msa1305050	0.827665	1.380213e-54	-8.615850e-47
Msa0173530	Msa1311400	0.848026	7.963982e-60	-8.615850e-47
Msa0173530	Msa1329300	0.810932	9.013382e-51	-8.615850e-47
Msa0173530	Msa1331250	0.801267	9.761842e-49	-8.615850e-47
Msa0173530	Msa1331710	0.857380	1.697952e-62	-8.615850e-47
Msa0173530	Msa1332250	0.894751	1.836459e-75	-8.615850e-47
Msa0173530	Msa1338190	0.867611	1.204666e-65	-8.615850e-47
Msa0173530	Msa1343260	0.864189	1.454229e-64	-8.615850e-47
Msa0173530	Msa1349570	0.907557	4.455117e-81	-8.615850e-47
Msa0173530	Msa1356790	0.854811	9.597938e-62	-8.615850e-47
Msa0173530	Msa1357350	0.802293	6.009547e-49	-8.615850e-47
Msa0173530	Msa1362790	0.839242	1.781821e-57	-8.615850e-47
Msa0173530	Msa1363330	0.885038	1.147069e-71	-8.615850e-47
Msa0173530	Msa1366180	0.850854	1.297237e-60	-8.615850e-47
Msa0173530	Msa1368920	0.819275	1.264786e-52	-8.615850e-47
Msa0173530	Msa1369190	0.879078	1.670516e-69	-8.615850e-47
Msa0173530	Msa1374240	0.816706	4.815508e-52	-8.615850e-47
Msa0173530	Msa1379760	0.863287	2.772050e-64	-8.615850e-47
Msa0173530	Msa1386600	0.885127	1.062247e-71	-8.615850e-47
Msa0173530	Msa1387410	0.854999	8.466798e-62	-8.615850e-47
Msa0173530	Msa1392590	0.830855	2.321495e-55	-8.615850e-47
Msa0173530	Msa1394290	0.810289	1.241120e-50	-8.615850e-47
Msa0173530	Msa1397100	0.837766	4.283550e-57	-8.615850e-47
Msa0173530	Msa1401390	0.827772	1.300720e-54	-8.615850e-47
Msa0173530	Msa1403910	0.838162	3.386840e-57	-8.615850e-47
Msa0173530	Msa1406080	0.829204	5.867613e-55	-8.615850e-47
Msa0173530	Msa1407070	0.805178	1.512969e-49	-8.615850e-47
Msa0173530	Msa1410440	0.830027	3.699284e-55	-8.615850e-47
Msa0173530	Msa1413500	0.913017	1.001339e-83	-8.615850e-47
Msa0173530	Msa1418770	0.827699	1.354497e-54	-8.615850e-47
Msa0173530	Msa1426120	0.881775	1.813590e-70	-8.615850e-47
Msa0173530	Msa1426370	0.893806	4.457902e-75	-8.615850e-47
Msa0173530	Msa1426490	0.908507	1.585777e-81	-8.615850e-47
Msa0173530	Msa1427560	0.880656	4.584856e-70	-8.615850e-47
Msa0173530	Msa1432700	0.802647	5.079402e-49	-8.615850e-47
Msa0173530	Msa1433310	0.829058	6.366262e-55	-8.615850e-47
Msa0173530	Msa1448690	0.845659	3.537752e-59	-8.615850e-47
Msa0173530	Msa1450280	0.850995	1.183667e-60	-8.615850e-47
Msa0173530	Msa1456050	0.812714	3.689987e-51	-8.615850e-47
Msa0173530	Msa1462860	0.803963	2.712425e-49	-8.615850e-47
Msa0173530	Msa1465260	0.847888	8.696266e-60	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173530	MtrunA17_Chr1g0181621	100.000	142	0	0	1	142	1	142	5.68e-102	288
Msa0173530	MtrunA17_Chr7g0263691	93.662	142	9	0	1	142	1	142	1.56e-94	269
Msa0173530	MtrunA17_Chr7g0239631	53.623	69	29	2	42	109	15	81	5.82e-16	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173530	AT5G02960.1	95.070	142	7	0	1	142	1	142	8.13e-95	270
Msa0173530	AT3G09680.1	92.958	142	10	0	1	142	1	142	1.41e-91	262

Find 71 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGTTGTCTTACTTGTATTT+TGG	0.189561	1_4:-58856994	Msa0173530:three_prime_UTR
GCCAGATAATTCGAAAATTA+TGG	0.265240	1_4:+58856954	None:intergenic
CAGGTTTCATTTCGGAGATT+AGG	0.266715	1_4:-58858868	Msa0173530:five_prime_UTR
TTCAAAGTTGTGAAGGTCTC+TGG	0.336661	1_4:-58857252	Msa0173530:CDS
ACACTTACGAATAGCTGAAT+TGG	0.338181	1_4:+58857573	None:intergenic
AGGTTTCATTTCGGAGATTA+GGG	0.349817	1_4:-58858867	Msa0173530:five_prime_UTR
TCTCCTTCTTCTCCTTGAAA+AGG	0.352760	1_4:+58857214	None:intergenic
AAGTAAGACAACCAGATGAT+AGG	0.359787	1_4:+58857003	None:intergenic
TGCTTCCTGTTGAGTGGGCA+TGG	0.379548	1_4:-58857124	Msa0173530:three_prime_UTR
ATTCCACAAATCTAAGATCT+TGG	0.379899	1_4:+58857189	None:intergenic
TGACTGGTTAACACTCTGTT+TGG	0.391356	1_4:-58856863	Msa0173530:three_prime_UTR
TAAATCCTCAGGTTTCATTT+CGG	0.393675	1_4:-58858876	None:intergenic
TGTGTTGAGCTCGGAGGTTA+TGG	0.405375	1_4:+58858803	None:intergenic
CATGCTGTGGGAGATATTCC+TGG	0.414411	1_4:-58857282	Msa0173530:CDS
CAGCTATTCGTAAGTGTGCC+AGG	0.416301	1_4:-58857567	Msa0173530:CDS
CTCCTTCTTCTCCTTGAAAA+GGG	0.418297	1_4:+58857215	None:intergenic
TGTGAATCTTCCCTATCATC+TGG	0.424196	1_4:-58857014	Msa0173530:three_prime_UTR
AATGCCCATGCCCACTCAAC+AGG	0.433793	1_4:+58857119	None:intergenic
GTAGTTTAGACAACCATCAT+TGG	0.437937	1_4:+58857501	None:intergenic
AAGATCTTAGATTTGTGGAA+TGG	0.444307	1_4:-58857187	Msa0173530:exon
GCTGCCTTTGTTCCCAATGA+TGG	0.449096	1_4:-58857514	Msa0173530:CDS
AGATCTTAGATTTGTGGAAT+GGG	0.462917	1_4:-58857186	Msa0173530:exon
TCATACAAGAAGTCTCATCT+TGG	0.473075	1_4:-58857771	Msa0173530:CDS
CACTTACGAATAGCTGAATT+GGG	0.473089	1_4:+58857574	None:intergenic
AGTAAGACAACCAGATGATA+GGG	0.475784	1_4:+58857004	None:intergenic
GGAGTTACCCCATGGCTGCT+TGG	0.477148	1_4:+58858774	None:intergenic
GCTTCCTGTTGAGTGGGCAT+GGG	0.479296	1_4:-58857123	Msa0173530:three_prime_UTR
TCAAAGTTGTGAAGGTCTCT+GGG	0.485775	1_4:-58857251	Msa0173530:CDS
TGCTGGTTCTTCCCACGCAA+AGG	0.487634	1_4:-58857727	Msa0173530:CDS
TGGTCCTTGTGTGTTGAGCT+CGG	0.488561	1_4:+58858794	None:intergenic
CTCACCGCAGGAGGCAAAGG+TGG	0.491520	1_4:-58857803	Msa0173530:CDS
TAGTTTAGACAACCATCATT+GGG	0.495609	1_4:+58857502	None:intergenic
GCTGGTTCTTCCCACGCAAA+GGG	0.497054	1_4:-58857726	Msa0173530:CDS
ATTGCTGGATTTGGAAGAAA+GGG	0.499669	1_4:-58857306	Msa0173530:CDS
GCGTGGGAAGAACCAGCAAA+AGG	0.504542	1_4:+58857732	None:intergenic
CATACAAGAAGTCTCATCTT+GGG	0.508352	1_4:-58857770	Msa0173530:CDS
GATTGCTGGATTTGGAAGAA+AGG	0.508603	1_4:-58857307	Msa0173530:CDS
AGGGTACAACTAATCAAGAA+TGG	0.513747	1_4:-58857547	Msa0173530:CDS
TATAGGAAGACACATGGAAT+GGG	0.517444	1_4:-58857846	Msa0173530:intron
AAGCCAAGATCTTAGATTTG+TGG	0.520253	1_4:-58857192	Msa0173530:exon
CAGCCCACCTTTGCCTCCTG+CGG	0.522174	1_4:+58857799	None:intergenic
ACACAAGGACCAAGCAGCCA+TGG	0.530103	1_4:-58858783	Msa0173530:exon
CGAGGACAATTCCCTTTGCG+TGG	0.534957	1_4:+58857715	None:intergenic
GATAATTCGAAAATTATGGT+TGG	0.538066	1_4:+58856958	None:intergenic
CACAAGGACCAAGCAGCCAT+GGG	0.544659	1_4:-58858782	Msa0173530:exon
GCAAGCTGAAGTCTCACCGC+AGG	0.557712	1_4:-58857815	Msa0173530:CDS
AGTCTCACCGCAGGAGGCAA+AGG	0.562641	1_4:-58857806	Msa0173530:CDS
GATAGGGAAGATTCACAAGT+AGG	0.567955	1_4:+58857020	None:intergenic
AGCTGAAGTCTCACCGCAGG+AGG	0.569090	1_4:-58857812	Msa0173530:CDS
AGTCTCATCTTGGGAATGAG+TGG	0.571456	1_4:-58857761	Msa0173530:CDS
GAGCAGCAACAGCACCAACA+CGG	0.572129	1_4:+58858834	None:intergenic
ATTCTTGATTAGTTGTACCC+TGG	0.574592	1_4:+58857549	None:intergenic
CTATAGGAAGACACATGGAA+TGG	0.575092	1_4:-58857847	Msa0173530:intron
ACAACTTTGAATCTAACTCC+AGG	0.579252	1_4:+58857264	None:intergenic
GTTGAGCTCGGAGGTTATGG+AGG	0.583331	1_4:+58858806	None:intergenic
TGGAAGAAAGGGTCATGCTG+TGG	0.584767	1_4:-58857295	Msa0173530:CDS
GGAAGAAAGGGTCATGCTGT+GGG	0.588458	1_4:-58857294	Msa0173530:CDS
TCACCGCAGGAGGCAAAGGT+GGG	0.600190	1_4:-58857802	Msa0173530:CDS
AGTTAGATTCAAAGTTGTGA+AGG	0.600905	1_4:-58857259	Msa0173530:CDS
ACAACCATCATTGGGAACAA+AGG	0.603558	1_4:+58857510	None:intergenic
ACCTCCGAGCTCAACACACA+AGG	0.619600	1_4:-58858798	Msa0173530:five_prime_UTR
ATTGTTAACAGAAAATTCAG+TGG	0.620701	1_4:+58856932	None:intergenic
TTATGGTTGGAACTATGTCA+TGG	0.623955	1_4:+58856971	None:intergenic
GAGGACAATTCCCTTTGCGT+GGG	0.632164	1_4:+58857716	None:intergenic
AGCTATTCGTAAGTGTGCCA+GGG	0.637371	1_4:-58857566	Msa0173530:CDS
CTTGTCTATAGGAAGACACA+TGG	0.644023	1_4:-58857852	Msa0173530:intron
TTGAGCTCGGAGGTTATGGA+GGG	0.646209	1_4:+58858807	None:intergenic
AATCTCCGAAATGAAACCTG+AGG	0.648840	1_4:+58858871	None:intergenic
CAAAGTTGTGAAGGTCTCTG+GGG	0.715188	1_4:-58857250	Msa0173530:CDS
TCCTTGTGTGTTGAGCTCGG+AGG	0.735284	1_4:+58858797	None:intergenic
ACAAGGACCAAGCAGCCATG+GGG	0.747559	1_4:-58858781	Msa0173530:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTATTTTGTTAGTATTT+AGG	-	chr1_4:58857055-58857074	Msa0173530:three_prime_UTR	10.0%
!!!	AATTTATTTTGTTAGTATTT+AGG	-	chr1_4:58857055-58857074	Msa0173530:three_prime_UTR	10.0%
!!!	AATTTGAAACTTGAATATTT+AGG	-	chr1_4:58857336-58857355	Msa0173530:intron	15.0%
!!	ATGAATAATTCATATGTATA+AGG	+	chr1_4:58857471-58857490	None:intergenic	15.0%
!!	TCAAATAAAATTCTAGTAAA+AGG	+	chr1_4:58858049-58858068	None:intergenic	15.0%
!!!	AATTTGAAACTTGAATATTT+AGG	-	chr1_4:58857336-58857355	Msa0173530:intron	15.0%
!!	ATGAATAATTCATATGTATA+AGG	+	chr1_4:58857471-58857490	None:intergenic	15.0%
!!	TCAAATAAAATTCTAGTAAA+AGG	+	chr1_4:58858049-58858068	None:intergenic	15.0%
!!!	TTAGTATTTAGGTTTCATTT+TGG	-	chr1_4:58857066-58857085	Msa0173530:three_prime_UTR	20.0%
!!!	TATTTATATTCGATTTGGAA+CGG	+	chr1_4:58857097-58857116	None:intergenic	20.0%
!!	TAGCATATTTATATTCGATT+TGG	+	chr1_4:58857102-58857121	None:intergenic	20.0%
!!!	CTTTTGTTTAGTTTAGTTTA+TGG	-	chr1_4:58857142-58857161	Msa0173530:three_prime_UTR	20.0%
!!!	ATTTGTTAGTTTATGACTTA+TGG	-	chr1_4:58857232-58857251	Msa0173530:CDS	20.0%
!!!	TTTGTTAGTTTATGACTTAT+GGG	-	chr1_4:58857233-58857252	Msa0173530:CDS	20.0%
!!	TATCTAAAAATGCTATAAGT+TGG	-	chr1_4:58857555-58857574	Msa0173530:CDS	20.0%
!!!	GCAAAAATCAACATAATTTT+GGG	+	chr1_4:58858565-58858584	None:intergenic	20.0%
!!!	AGCAAAAATCAACATAATTT+TGG	+	chr1_4:58858566-58858585	None:intergenic	20.0%
!!!	TTTTGTATCTTGTTATTTTG+TGG	-	chr1_4:58858618-58858637	Msa0173530:intron	20.0%
!!!	TTAGTATTTAGGTTTCATTT+TGG	-	chr1_4:58857066-58857085	Msa0173530:three_prime_UTR	20.0%
!!!	TATTTATATTCGATTTGGAA+CGG	+	chr1_4:58857097-58857116	None:intergenic	20.0%
!!	TAGCATATTTATATTCGATT+TGG	+	chr1_4:58857102-58857121	None:intergenic	20.0%
!!!	CTTTTGTTTAGTTTAGTTTA+TGG	-	chr1_4:58857142-58857161	Msa0173530:three_prime_UTR	20.0%
!!!	ATTTGTTAGTTTATGACTTA+TGG	-	chr1_4:58857232-58857251	Msa0173530:CDS	20.0%
!!!	TTTGTTAGTTTATGACTTAT+GGG	-	chr1_4:58857233-58857252	Msa0173530:CDS	20.0%
!!	TATCTAAAAATGCTATAAGT+TGG	-	chr1_4:58857555-58857574	Msa0173530:CDS	20.0%
!!!	GCAAAAATCAACATAATTTT+GGG	+	chr1_4:58858565-58858584	None:intergenic	20.0%
!!!	AGCAAAAATCAACATAATTT+TGG	+	chr1_4:58858566-58858585	None:intergenic	20.0%
!!!	TTTTGTATCTTGTTATTTTG+TGG	-	chr1_4:58858618-58858637	Msa0173530:intron	20.0%
!!!	TCCTTATGAATATCGATTTT+GGG	+	chr1_4:58857015-58857034	None:intergenic	25.0%
!!!	ATCCTTATGAATATCGATTT+TGG	+	chr1_4:58857016-58857035	None:intergenic	25.0%
!	CTGATTAAATTTGTAGTGTT+TGG	-	chr1_4:58857425-58857444	Msa0173530:intron	25.0%
!!!	CTTTTTGTTGTAAATGACTT+AGG	-	chr1_4:58857723-58857742	Msa0173530:CDS	25.0%
!!!	GATTGTTGTTTTATTTACAG+TGG	-	chr1_4:58858093-58858112	Msa0173530:intron	25.0%
!!!	TTTTATTTACAGTGGTATTG+AGG	-	chr1_4:58858101-58858120	Msa0173530:intron	25.0%
!!!	ATTTTTTCACACTTACTCTT+AGG	-	chr1_4:58858647-58858666	Msa0173530:intron	25.0%
!	GATAATTCGAAAATTATGGT+TGG	+	chr1_4:58858751-58858770	None:intergenic	25.0%
!!	ACCATAATTTTCGAATTATC+TGG	-	chr1_4:58858751-58858770	Msa0173530:intron	25.0%
!	ATTGTTAACAGAAAATTCAG+TGG	+	chr1_4:58858777-58858796	None:intergenic	25.0%
!!!	TCCTTATGAATATCGATTTT+GGG	+	chr1_4:58857015-58857034	None:intergenic	25.0%
!!!	ATCCTTATGAATATCGATTT+TGG	+	chr1_4:58857016-58857035	None:intergenic	25.0%
!	CTGATTAAATTTGTAGTGTT+TGG	-	chr1_4:58857425-58857444	Msa0173530:intron	25.0%
!!!	CTTTTTGTTGTAAATGACTT+AGG	-	chr1_4:58857723-58857742	Msa0173530:CDS	25.0%
!!!	GATTGTTGTTTTATTTACAG+TGG	-	chr1_4:58858093-58858112	Msa0173530:intron	25.0%
!!!	TTTTATTTACAGTGGTATTG+AGG	-	chr1_4:58858101-58858120	Msa0173530:intron	25.0%
!!!	ATTTTTTCACACTTACTCTT+AGG	-	chr1_4:58858647-58858666	Msa0173530:intron	25.0%
!	GATAATTCGAAAATTATGGT+TGG	+	chr1_4:58858751-58858770	None:intergenic	25.0%
!!	ACCATAATTTTCGAATTATC+TGG	-	chr1_4:58858751-58858770	Msa0173530:intron	25.0%
!	ATTGTTAACAGAAAATTCAG+TGG	+	chr1_4:58858777-58858796	None:intergenic	25.0%
	TGCAATAGAAAATGCAGAAA+AGG	+	chr1_4:58856965-58856984	None:intergenic	30.0%
!!!	ATGAATATCGATTTTGGGAA+TGG	+	chr1_4:58857010-58857029	None:intergenic	30.0%
	TCCCAAAATCGATATTCATA+AGG	-	chr1_4:58857011-58857030	Msa0173530:three_prime_UTR	30.0%
!!	GTATTTAGGTTTCATTTTGG+TGG	-	chr1_4:58857069-58857088	Msa0173530:three_prime_UTR	30.0%
!!	TCTATTTTTCGTTCTTCTTG+TGG	-	chr1_4:58857269-58857288	Msa0173530:CDS	30.0%
!	GTAAGCTTCTGAAAAAATGA+CGG	-	chr1_4:58857590-58857609	Msa0173530:CDS	30.0%
	GTCTTCAACACTTTGATATT+AGG	-	chr1_4:58857745-58857764	Msa0173530:CDS	30.0%
	TTCAACACTTTGATATTAGG+TGG	-	chr1_4:58857748-58857767	Msa0173530:CDS	30.0%
	TCAACACTTTGATATTAGGT+GGG	-	chr1_4:58857749-58857768	Msa0173530:CDS	30.0%
!	AAATCTTCTGACTTGTCTAT+AGG	-	chr1_4:58857843-58857862	Msa0173530:CDS	30.0%
	TAGTTTAGACAACCATCATT+GGG	+	chr1_4:58858207-58858226	None:intergenic	30.0%
!	TCCTTGCTCATATTTTCTAT+TGG	-	chr1_4:58858245-58858264	Msa0173530:intron	30.0%
	ACCAATAGAAAATATGAGCA+AGG	+	chr1_4:58858249-58858268	None:intergenic	30.0%
	TGACTTTAAACTGATATGTC+TGG	-	chr1_4:58858277-58858296	Msa0173530:intron	30.0%
	AGTTAGATTCAAAGTTGTGA+AGG	-	chr1_4:58858447-58858466	Msa0173530:intron	30.0%
!	ATTCCACAAATCTAAGATCT+TGG	+	chr1_4:58858520-58858539	None:intergenic	30.0%
	AAGATCTTAGATTTGTGGAA+TGG	-	chr1_4:58858519-58858538	Msa0173530:intron	30.0%
	AGATCTTAGATTTGTGGAAT+GGG	-	chr1_4:58858520-58858539	Msa0173530:intron	30.0%
!	TGGTTGTCTTACTTGTATTT+TGG	-	chr1_4:58858712-58858731	Msa0173530:intron	30.0%
	GCCAGATAATTCGAAAATTA+TGG	+	chr1_4:58858755-58858774	None:intergenic	30.0%
	TGCAATAGAAAATGCAGAAA+AGG	+	chr1_4:58856965-58856984	None:intergenic	30.0%
!!!	ATGAATATCGATTTTGGGAA+TGG	+	chr1_4:58857010-58857029	None:intergenic	30.0%
	TCCCAAAATCGATATTCATA+AGG	-	chr1_4:58857011-58857030	Msa0173530:three_prime_UTR	30.0%
!!	GTATTTAGGTTTCATTTTGG+TGG	-	chr1_4:58857069-58857088	Msa0173530:three_prime_UTR	30.0%
!!	TCTATTTTTCGTTCTTCTTG+TGG	-	chr1_4:58857269-58857288	Msa0173530:CDS	30.0%
!	GTAAGCTTCTGAAAAAATGA+CGG	-	chr1_4:58857590-58857609	Msa0173530:CDS	30.0%
	GTCTTCAACACTTTGATATT+AGG	-	chr1_4:58857745-58857764	Msa0173530:CDS	30.0%
	TTCAACACTTTGATATTAGG+TGG	-	chr1_4:58857748-58857767	Msa0173530:CDS	30.0%
	TCAACACTTTGATATTAGGT+GGG	-	chr1_4:58857749-58857768	Msa0173530:CDS	30.0%
!	AAATCTTCTGACTTGTCTAT+AGG	-	chr1_4:58857843-58857862	Msa0173530:CDS	30.0%
	TAGTTTAGACAACCATCATT+GGG	+	chr1_4:58858207-58858226	None:intergenic	30.0%
!	TCCTTGCTCATATTTTCTAT+TGG	-	chr1_4:58858245-58858264	Msa0173530:intron	30.0%
	ACCAATAGAAAATATGAGCA+AGG	+	chr1_4:58858249-58858268	None:intergenic	30.0%
	TGACTTTAAACTGATATGTC+TGG	-	chr1_4:58858277-58858296	Msa0173530:intron	30.0%
	AGTTAGATTCAAAGTTGTGA+AGG	-	chr1_4:58858447-58858466	Msa0173530:intron	30.0%
!	ATTCCACAAATCTAAGATCT+TGG	+	chr1_4:58858520-58858539	None:intergenic	30.0%
	AAGATCTTAGATTTGTGGAA+TGG	-	chr1_4:58858519-58858538	Msa0173530:intron	30.0%
	AGATCTTAGATTTGTGGAAT+GGG	-	chr1_4:58858520-58858539	Msa0173530:intron	30.0%
!	TGGTTGTCTTACTTGTATTT+TGG	-	chr1_4:58858712-58858731	Msa0173530:intron	30.0%
	GCCAGATAATTCGAAAATTA+TGG	+	chr1_4:58858755-58858774	None:intergenic	30.0%
	AGGTTTCATTTCGGAGATTA+GGG	-	chr1_4:58856839-58856858	Msa0173530:three_prime_UTR	35.0%
	AAATGCAGAAAAGGCAATGA+AGG	+	chr1_4:58856956-58856975	None:intergenic	35.0%
!!	GATTTTGGGAATGGTTAACA+GGG	+	chr1_4:58857001-58857020	None:intergenic	35.0%
	TTACACAAACCTAATGCCAT+AGG	+	chr1_4:58857207-58857226	None:intergenic	35.0%
	TAGTTTATGACTTATGGGAC+TGG	-	chr1_4:58857238-58857257	Msa0173530:CDS	35.0%
!	AACTGATAAGCTAGCCTATA+GGG	-	chr1_4:58857384-58857403	Msa0173530:intron	35.0%
	TTCACAACTAAGAGTCTGTT+TGG	+	chr1_4:58857679-58857698	None:intergenic	35.0%
	TTTGATATTAGGTGGGAATC+AGG	-	chr1_4:58857756-58857775	Msa0173530:CDS	35.0%
	TATAGGAAGACACATGGAAT+GGG	-	chr1_4:58857860-58857879	Msa0173530:intron	35.0%
	TCATACAAGAAGTCTCATCT+TGG	-	chr1_4:58857935-58857954	Msa0173530:intron	35.0%
	CATACAAGAAGTCTCATCTT+GGG	-	chr1_4:58857936-58857955	Msa0173530:intron	35.0%
	CACTTACGAATAGCTGAATT+GGG	+	chr1_4:58858135-58858154	None:intergenic	35.0%
	ACACTTACGAATAGCTGAAT+TGG	+	chr1_4:58858136-58858155	None:intergenic	35.0%
!	ATTCTTGATTAGTTGTACCC+TGG	+	chr1_4:58858160-58858179	None:intergenic	35.0%
	AGGGTACAACTAATCAAGAA+TGG	-	chr1_4:58858159-58858178	Msa0173530:intron	35.0%
	GTAGTTTAGACAACCATCAT+TGG	+	chr1_4:58858208-58858227	None:intergenic	35.0%
!!!	GAAGTTTTGATTGCTGGATT+TGG	-	chr1_4:58858391-58858410	Msa0173530:intron	35.0%
	ATTGCTGGATTTGGAAGAAA+GGG	-	chr1_4:58858400-58858419	Msa0173530:intron	35.0%
	ACAACTTTGAATCTAACTCC+AGG	+	chr1_4:58858445-58858464	None:intergenic	35.0%
	AAGCCAAGATCTTAGATTTG+TGG	-	chr1_4:58858514-58858533	Msa0173530:intron	35.0%
!	ATTTTTGCTTCCTGTTGAGT+GGG	-	chr1_4:58858577-58858596	Msa0173530:intron	35.0%
	AGTAAGACAACCAGATGATA+GGG	+	chr1_4:58858705-58858724	None:intergenic	35.0%
	AAGTAAGACAACCAGATGAT+AGG	+	chr1_4:58858706-58858725	None:intergenic	35.0%
	TTATGGTTGGAACTATGTCA+TGG	+	chr1_4:58858738-58858757	None:intergenic	35.0%
!!!	CATTGACTTGTTTTGTTGAC+TGG	-	chr1_4:58858827-58858846	Msa0173530:five_prime_UTR	35.0%
	AGGTTTCATTTCGGAGATTA+GGG	-	chr1_4:58856839-58856858	Msa0173530:three_prime_UTR	35.0%
	AAATGCAGAAAAGGCAATGA+AGG	+	chr1_4:58856956-58856975	None:intergenic	35.0%
!!	GATTTTGGGAATGGTTAACA+GGG	+	chr1_4:58857001-58857020	None:intergenic	35.0%
	TTACACAAACCTAATGCCAT+AGG	+	chr1_4:58857207-58857226	None:intergenic	35.0%
	TAGTTTATGACTTATGGGAC+TGG	-	chr1_4:58857238-58857257	Msa0173530:CDS	35.0%
!	AACTGATAAGCTAGCCTATA+GGG	-	chr1_4:58857384-58857403	Msa0173530:intron	35.0%
	TTCACAACTAAGAGTCTGTT+TGG	+	chr1_4:58857679-58857698	None:intergenic	35.0%
	TTTGATATTAGGTGGGAATC+AGG	-	chr1_4:58857756-58857775	Msa0173530:CDS	35.0%
	TATAGGAAGACACATGGAAT+GGG	-	chr1_4:58857860-58857879	Msa0173530:intron	35.0%
	TCATACAAGAAGTCTCATCT+TGG	-	chr1_4:58857935-58857954	Msa0173530:intron	35.0%
	CATACAAGAAGTCTCATCTT+GGG	-	chr1_4:58857936-58857955	Msa0173530:intron	35.0%
	CACTTACGAATAGCTGAATT+GGG	+	chr1_4:58858135-58858154	None:intergenic	35.0%
	ACACTTACGAATAGCTGAAT+TGG	+	chr1_4:58858136-58858155	None:intergenic	35.0%
!	ATTCTTGATTAGTTGTACCC+TGG	+	chr1_4:58858160-58858179	None:intergenic	35.0%
	AGGGTACAACTAATCAAGAA+TGG	-	chr1_4:58858159-58858178	Msa0173530:intron	35.0%
	GTAGTTTAGACAACCATCAT+TGG	+	chr1_4:58858208-58858227	None:intergenic	35.0%
!!!	GAAGTTTTGATTGCTGGATT+TGG	-	chr1_4:58858391-58858410	Msa0173530:intron	35.0%
	ATTGCTGGATTTGGAAGAAA+GGG	-	chr1_4:58858400-58858419	Msa0173530:intron	35.0%
	ACAACTTTGAATCTAACTCC+AGG	+	chr1_4:58858445-58858464	None:intergenic	35.0%
	AAGCCAAGATCTTAGATTTG+TGG	-	chr1_4:58858514-58858533	Msa0173530:intron	35.0%
!	ATTTTTGCTTCCTGTTGAGT+GGG	-	chr1_4:58858577-58858596	Msa0173530:intron	35.0%
	AGTAAGACAACCAGATGATA+GGG	+	chr1_4:58858705-58858724	None:intergenic	35.0%
	AAGTAAGACAACCAGATGAT+AGG	+	chr1_4:58858706-58858725	None:intergenic	35.0%
	TTATGGTTGGAACTATGTCA+TGG	+	chr1_4:58858738-58858757	None:intergenic	35.0%
!!!	CATTGACTTGTTTTGTTGAC+TGG	-	chr1_4:58858827-58858846	Msa0173530:five_prime_UTR	35.0%
	CAGGTTTCATTTCGGAGATT+AGG	-	chr1_4:58856838-58856857	Msa0173530:three_prime_UTR	40.0%
!!	CGATTTTGGGAATGGTTAAC+AGG	+	chr1_4:58857002-58857021	None:intergenic	40.0%
	CCAGCACATTACATACAGAT+AGG	+	chr1_4:58857176-58857195	None:intergenic	40.0%
	CCTATCTGTATGTAATGTGC+TGG	-	chr1_4:58857173-58857192	Msa0173530:three_prime_UTR	40.0%
	GCTAAGTTTCCTATGGCATT+AGG	-	chr1_4:58857195-58857214	Msa0173530:exon	40.0%
!	GAACTGATAAGCTAGCCTAT+AGG	-	chr1_4:58857383-58857402	Msa0173530:intron	40.0%
!	ACTGATAAGCTAGCCTATAG+GGG	-	chr1_4:58857385-58857404	Msa0173530:intron	40.0%
	TTGACTAAAAAAGACCAGCC+TGG	+	chr1_4:58857619-58857638	None:intergenic	40.0%
	CTTGTCTATAGGAAGACACA+TGG	-	chr1_4:58857854-58857873	Msa0173530:intron	40.0%
	CTATAGGAAGACACATGGAA+TGG	-	chr1_4:58857859-58857878	Msa0173530:intron	40.0%
	TCCTCGAAAAGATGTAAGAG+TGG	-	chr1_4:58858008-58858027	Msa0173530:intron	40.0%
!	ACCACTCTTACATCTTTTCG+AGG	+	chr1_4:58858012-58858031	None:intergenic	40.0%
	GATGTAAGAGTGGTTAAGCT+TGG	-	chr1_4:58858018-58858037	Msa0173530:intron	40.0%
	ACAACCATCATTGGGAACAA+AGG	+	chr1_4:58858199-58858218	None:intergenic	40.0%
	ACACACAATGTCACACAAGA+TGG	+	chr1_4:58858353-58858372	None:intergenic	40.0%
!!!	CAGGATGAAGTTTTGATTGC+TGG	-	chr1_4:58858385-58858404	Msa0173530:intron	40.0%
	GATTGCTGGATTTGGAAGAA+AGG	-	chr1_4:58858399-58858418	Msa0173530:intron	40.0%
	TTCAAAGTTGTGAAGGTCTC+TGG	-	chr1_4:58858454-58858473	Msa0173530:intron	40.0%
	TCAAAGTTGTGAAGGTCTCT+GGG	-	chr1_4:58858455-58858474	Msa0173530:intron	40.0%
	CTCCTTCTTCTCCTTGAAAA+GGG	+	chr1_4:58858494-58858513	None:intergenic	40.0%
	TCTCCTTCTTCTCCTTGAAA+AGG	+	chr1_4:58858495-58858514	None:intergenic	40.0%
!	GATTTTTGCTTCCTGTTGAG+TGG	-	chr1_4:58858576-58858595	Msa0173530:intron	40.0%
	GATAGGGAAGATTCACAAGT+AGG	+	chr1_4:58858689-58858708	None:intergenic	40.0%
	TGTGAATCTTCCCTATCATC+TGG	-	chr1_4:58858692-58858711	Msa0173530:intron	40.0%
!	TGACTGGTTAACACTCTGTT+TGG	-	chr1_4:58858843-58858862	Msa0173530:five_prime_UTR	40.0%
	AATCTCCGAAATGAAACCTG+AGG	+	chr1_4:58856838-58856857	None:intergenic	40.0%
	CAGGTTTCATTTCGGAGATT+AGG	-	chr1_4:58856838-58856857	Msa0173530:three_prime_UTR	40.0%
!!	CGATTTTGGGAATGGTTAAC+AGG	+	chr1_4:58857002-58857021	None:intergenic	40.0%
	CCAGCACATTACATACAGAT+AGG	+	chr1_4:58857176-58857195	None:intergenic	40.0%
	CCTATCTGTATGTAATGTGC+TGG	-	chr1_4:58857173-58857192	Msa0173530:three_prime_UTR	40.0%
	GCTAAGTTTCCTATGGCATT+AGG	-	chr1_4:58857195-58857214	Msa0173530:exon	40.0%
!	GAACTGATAAGCTAGCCTAT+AGG	-	chr1_4:58857383-58857402	Msa0173530:intron	40.0%
!	ACTGATAAGCTAGCCTATAG+GGG	-	chr1_4:58857385-58857404	Msa0173530:intron	40.0%
	TTGACTAAAAAAGACCAGCC+TGG	+	chr1_4:58857619-58857638	None:intergenic	40.0%
	CTTGTCTATAGGAAGACACA+TGG	-	chr1_4:58857854-58857873	Msa0173530:intron	40.0%
	CTATAGGAAGACACATGGAA+TGG	-	chr1_4:58857859-58857878	Msa0173530:intron	40.0%
	TCCTCGAAAAGATGTAAGAG+TGG	-	chr1_4:58858008-58858027	Msa0173530:intron	40.0%
!	ACCACTCTTACATCTTTTCG+AGG	+	chr1_4:58858012-58858031	None:intergenic	40.0%
	GATGTAAGAGTGGTTAAGCT+TGG	-	chr1_4:58858018-58858037	Msa0173530:intron	40.0%
	ACAACCATCATTGGGAACAA+AGG	+	chr1_4:58858199-58858218	None:intergenic	40.0%
	ACACACAATGTCACACAAGA+TGG	+	chr1_4:58858353-58858372	None:intergenic	40.0%
!!!	CAGGATGAAGTTTTGATTGC+TGG	-	chr1_4:58858385-58858404	Msa0173530:intron	40.0%
	GATTGCTGGATTTGGAAGAA+AGG	-	chr1_4:58858399-58858418	Msa0173530:intron	40.0%
	TTCAAAGTTGTGAAGGTCTC+TGG	-	chr1_4:58858454-58858473	Msa0173530:intron	40.0%
	TCAAAGTTGTGAAGGTCTCT+GGG	-	chr1_4:58858455-58858474	Msa0173530:intron	40.0%
	CTCCTTCTTCTCCTTGAAAA+GGG	+	chr1_4:58858494-58858513	None:intergenic	40.0%
	TCTCCTTCTTCTCCTTGAAA+AGG	+	chr1_4:58858495-58858514	None:intergenic	40.0%
!	GATTTTTGCTTCCTGTTGAG+TGG	-	chr1_4:58858576-58858595	Msa0173530:intron	40.0%
	GATAGGGAAGATTCACAAGT+AGG	+	chr1_4:58858689-58858708	None:intergenic	40.0%
	TGTGAATCTTCCCTATCATC+TGG	-	chr1_4:58858692-58858711	Msa0173530:intron	40.0%
!	TGACTGGTTAACACTCTGTT+TGG	-	chr1_4:58858843-58858862	Msa0173530:five_prime_UTR	40.0%
!!	TGTGCTGGCTAAGTTTCCTA+TGG	-	chr1_4:58857188-58857207	Msa0173530:exon	45.0%
	TTCGTTCTTCTTGTGGAGCA+TGG	-	chr1_4:58857276-58857295	Msa0173530:CDS	45.0%
	TCGTTCTTCTTGTGGAGCAT+GGG	-	chr1_4:58857277-58857296	Msa0173530:CDS	45.0%
	CTGAAAAAATGACGGTCACC+AGG	-	chr1_4:58857598-58857617	Msa0173530:intron	45.0%
	AGTCTCATCTTGGGAATGAG+TGG	-	chr1_4:58857945-58857964	Msa0173530:intron	45.0%
!	GAGTGGAAGAAACCTTTTGC+TGG	-	chr1_4:58857962-58857981	Msa0173530:intron	45.0%
	AGCTATTCGTAAGTGTGCCA+GGG	-	chr1_4:58858140-58858159	Msa0173530:intron	45.0%
	GTGACATTGTGTGTGACTGA+TGG	-	chr1_4:58858359-58858378	Msa0173530:intron	45.0%
	CAAAGTTGTGAAGGTCTCTG+GGG	-	chr1_4:58858456-58858475	Msa0173530:intron	45.0%
!	GTCTCTTCTTGCCCTTTTCA+AGG	-	chr1_4:58858480-58858499	Msa0173530:intron	45.0%
!!	TGCCCTTTTCAAGGAGAAGA+AGG	-	chr1_4:58858489-58858508	Msa0173530:intron	45.0%
!!	TGTGCTGGCTAAGTTTCCTA+TGG	-	chr1_4:58857188-58857207	Msa0173530:exon	45.0%
	TTCGTTCTTCTTGTGGAGCA+TGG	-	chr1_4:58857276-58857295	Msa0173530:CDS	45.0%
	TCGTTCTTCTTGTGGAGCAT+GGG	-	chr1_4:58857277-58857296	Msa0173530:CDS	45.0%
	CTGAAAAAATGACGGTCACC+AGG	-	chr1_4:58857598-58857617	Msa0173530:intron	45.0%
	AGTCTCATCTTGGGAATGAG+TGG	-	chr1_4:58857945-58857964	Msa0173530:intron	45.0%
!	GAGTGGAAGAAACCTTTTGC+TGG	-	chr1_4:58857962-58857981	Msa0173530:intron	45.0%
	AGCTATTCGTAAGTGTGCCA+GGG	-	chr1_4:58858140-58858159	Msa0173530:intron	45.0%
	GTGACATTGTGTGTGACTGA+TGG	-	chr1_4:58858359-58858378	Msa0173530:intron	45.0%
	CAAAGTTGTGAAGGTCTCTG+GGG	-	chr1_4:58858456-58858475	Msa0173530:intron	45.0%
!	GTCTCTTCTTGCCCTTTTCA+AGG	-	chr1_4:58858480-58858499	Msa0173530:intron	45.0%
!!	TGCCCTTTTCAAGGAGAAGA+AGG	-	chr1_4:58858489-58858508	Msa0173530:intron	45.0%
!	AGGGTTTTCGTCTTCCGTGT+TGG	-	chr1_4:58856858-58856877	Msa0173530:three_prime_UTR	50.0%
	TTGAGCTCGGAGGTTATGGA+GGG	+	chr1_4:58856902-58856921	None:intergenic	50.0%
	TGTGTTGAGCTCGGAGGTTA+TGG	+	chr1_4:58856906-58856925	None:intergenic	50.0%
	TGGTCCTTGTGTGTTGAGCT+CGG	+	chr1_4:58856915-58856934	None:intergenic	50.0%
	GCAATGAAGGAGTTACCCCA+TGG	+	chr1_4:58856943-58856962	None:intergenic	50.0%
	CCAATCAGCTCATCCCCTAT+AGG	+	chr1_4:58857401-58857420	None:intergenic	50.0%
	CCTATAGGGGATGAGCTGAT+TGG	-	chr1_4:58857398-58857417	Msa0173530:intron	50.0%
	AAAAATGACGGTCACCAGGC+TGG	-	chr1_4:58857602-58857621	Msa0173530:intron	50.0%
	GAGGACAATTCCCTTTGCGT+GGG	+	chr1_4:58857993-58858012	None:intergenic	50.0%
	CAGCTATTCGTAAGTGTGCC+AGG	-	chr1_4:58858139-58858158	Msa0173530:intron	50.0%
	GCTGCCTTTGTTCCCAATGA+TGG	-	chr1_4:58858192-58858211	Msa0173530:intron	50.0%
	TGTGTGTGACTGATGGTTGC+AGG	-	chr1_4:58858366-58858385	Msa0173530:intron	50.0%
	TGGAAGAAAGGGTCATGCTG+TGG	-	chr1_4:58858411-58858430	Msa0173530:intron	50.0%
	GGAAGAAAGGGTCATGCTGT+GGG	-	chr1_4:58858412-58858431	Msa0173530:intron	50.0%
	CATGCTGTGGGAGATATTCC+TGG	-	chr1_4:58858424-58858443	Msa0173530:intron	50.0%
!	AGGGTTTTCGTCTTCCGTGT+TGG	-	chr1_4:58856858-58856877	Msa0173530:three_prime_UTR	50.0%
	TTGAGCTCGGAGGTTATGGA+GGG	+	chr1_4:58856902-58856921	None:intergenic	50.0%
	TGTGTTGAGCTCGGAGGTTA+TGG	+	chr1_4:58856906-58856925	None:intergenic	50.0%
	TGGTCCTTGTGTGTTGAGCT+CGG	+	chr1_4:58856915-58856934	None:intergenic	50.0%
	GCAATGAAGGAGTTACCCCA+TGG	+	chr1_4:58856943-58856962	None:intergenic	50.0%
	CCAATCAGCTCATCCCCTAT+AGG	+	chr1_4:58857401-58857420	None:intergenic	50.0%
	CCTATAGGGGATGAGCTGAT+TGG	-	chr1_4:58857398-58857417	Msa0173530:intron	50.0%
	AAAAATGACGGTCACCAGGC+TGG	-	chr1_4:58857602-58857621	Msa0173530:intron	50.0%
	GAGGACAATTCCCTTTGCGT+GGG	+	chr1_4:58857993-58858012	None:intergenic	50.0%
	CAGCTATTCGTAAGTGTGCC+AGG	-	chr1_4:58858139-58858158	Msa0173530:intron	50.0%
	GCTGCCTTTGTTCCCAATGA+TGG	-	chr1_4:58858192-58858211	Msa0173530:intron	50.0%
	TGTGTGTGACTGATGGTTGC+AGG	-	chr1_4:58858366-58858385	Msa0173530:intron	50.0%
	TGGAAGAAAGGGTCATGCTG+TGG	-	chr1_4:58858411-58858430	Msa0173530:intron	50.0%
	GGAAGAAAGGGTCATGCTGT+GGG	-	chr1_4:58858412-58858431	Msa0173530:intron	50.0%
	CATGCTGTGGGAGATATTCC+TGG	-	chr1_4:58858424-58858443	Msa0173530:intron	50.0%
	GAGCAGCAACAGCACCAACA+CGG	+	chr1_4:58856875-58856894	None:intergenic	55.0%
	GTTGAGCTCGGAGGTTATGG+AGG	+	chr1_4:58856903-58856922	None:intergenic	55.0%
	ACCTCCGAGCTCAACACACA+AGG	-	chr1_4:58856908-58856927	Msa0173530:three_prime_UTR	55.0%
	TCCTTGTGTGTTGAGCTCGG+AGG	+	chr1_4:58856912-58856931	None:intergenic	55.0%
	ACACAAGGACCAAGCAGCCA+TGG	-	chr1_4:58856923-58856942	Msa0173530:three_prime_UTR	55.0%
	CACAAGGACCAAGCAGCCAT+GGG	-	chr1_4:58856924-58856943	Msa0173530:three_prime_UTR	55.0%
	ACAAGGACCAAGCAGCCATG+GGG	-	chr1_4:58856925-58856944	Msa0173530:three_prime_UTR	55.0%
	GCGTGGGAAGAACCAGCAAA+AGG	+	chr1_4:58857977-58857996	None:intergenic	55.0%
!!	TGCTGGTTCTTCCCACGCAA+AGG	-	chr1_4:58857979-58857998	Msa0173530:intron	55.0%
!	GCTGGTTCTTCCCACGCAAA+GGG	-	chr1_4:58857980-58857999	Msa0173530:intron	55.0%
	CGAGGACAATTCCCTTTGCG+TGG	+	chr1_4:58857994-58858013	None:intergenic	55.0%
	TGCTTCCTGTTGAGTGGGCA+TGG	-	chr1_4:58858582-58858601	Msa0173530:intron	55.0%
	GCTTCCTGTTGAGTGGGCAT+GGG	-	chr1_4:58858583-58858602	Msa0173530:intron	55.0%
	AATGCCCATGCCCACTCAAC+AGG	+	chr1_4:58858590-58858609	None:intergenic	55.0%
	GAGCAGCAACAGCACCAACA+CGG	+	chr1_4:58856875-58856894	None:intergenic	55.0%
	GTTGAGCTCGGAGGTTATGG+AGG	+	chr1_4:58856903-58856922	None:intergenic	55.0%
	ACCTCCGAGCTCAACACACA+AGG	-	chr1_4:58856908-58856927	Msa0173530:three_prime_UTR	55.0%
	TCCTTGTGTGTTGAGCTCGG+AGG	+	chr1_4:58856912-58856931	None:intergenic	55.0%
	ACACAAGGACCAAGCAGCCA+TGG	-	chr1_4:58856923-58856942	Msa0173530:three_prime_UTR	55.0%
	CACAAGGACCAAGCAGCCAT+GGG	-	chr1_4:58856924-58856943	Msa0173530:three_prime_UTR	55.0%
	ACAAGGACCAAGCAGCCATG+GGG	-	chr1_4:58856925-58856944	Msa0173530:three_prime_UTR	55.0%
	GCGTGGGAAGAACCAGCAAA+AGG	+	chr1_4:58857977-58857996	None:intergenic	55.0%
!!	TGCTGGTTCTTCCCACGCAA+AGG	-	chr1_4:58857979-58857998	Msa0173530:intron	55.0%
!	GCTGGTTCTTCCCACGCAAA+GGG	-	chr1_4:58857980-58857999	Msa0173530:intron	55.0%
	CGAGGACAATTCCCTTTGCG+TGG	+	chr1_4:58857994-58858013	None:intergenic	55.0%
	TGCTTCCTGTTGAGTGGGCA+TGG	-	chr1_4:58858582-58858601	Msa0173530:intron	55.0%
	GCTTCCTGTTGAGTGGGCAT+GGG	-	chr1_4:58858583-58858602	Msa0173530:intron	55.0%
	AATGCCCATGCCCACTCAAC+AGG	+	chr1_4:58858590-58858609	None:intergenic	55.0%
	GGAGTTACCCCATGGCTGCT+TGG	+	chr1_4:58856935-58856954	None:intergenic	60.0%
	GCAAGCTGAAGTCTCACCGC+AGG	-	chr1_4:58857891-58857910	Msa0173530:intron	60.0%
	AGCTGAAGTCTCACCGCAGG+AGG	-	chr1_4:58857894-58857913	Msa0173530:intron	60.0%
	AGTCTCACCGCAGGAGGCAA+AGG	-	chr1_4:58857900-58857919	Msa0173530:intron	60.0%
	TCACCGCAGGAGGCAAAGGT+GGG	-	chr1_4:58857904-58857923	Msa0173530:intron	60.0%
	GGAGTTACCCCATGGCTGCT+TGG	+	chr1_4:58856935-58856954	None:intergenic	60.0%
	GCAAGCTGAAGTCTCACCGC+AGG	-	chr1_4:58857891-58857910	Msa0173530:intron	60.0%
	AGCTGAAGTCTCACCGCAGG+AGG	-	chr1_4:58857894-58857913	Msa0173530:intron	60.0%
	AGTCTCACCGCAGGAGGCAA+AGG	-	chr1_4:58857900-58857919	Msa0173530:intron	60.0%
	TCACCGCAGGAGGCAAAGGT+GGG	-	chr1_4:58857904-58857923	Msa0173530:intron	60.0%
	CTCACCGCAGGAGGCAAAGG+TGG	-	chr1_4:58857903-58857922	Msa0173530:intron	65.0%
	CAGCCCACCTTTGCCTCCTG+CGG	+	chr1_4:58857910-58857929	None:intergenic	65.0%
	CTCACCGCAGGAGGCAAAGG+TGG	-	chr1_4:58857903-58857922	Msa0173530:intron	65.0%
	CAGCCCACCTTTGCCTCCTG+CGG	+	chr1_4:58857910-58857929	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	58856836	58858892	58856836	ID=Msa0173530;Name=Msa0173530
chr1_4	mRNA	58856836	58858892	58856836	ID=Msa0173530-mRNA-1;Parent=Msa0173530;Name=Msa0173530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=106\|1\|1\|1\|1\|1\|4\|364\|142
chr1_4	exon	58856836	58857340	58856836	ID=Msa0173530-mRNA-1:exon:18320;Parent=Msa0173530-mRNA-1
chr1_4	exon	58857489	58857615	58857489	ID=Msa0173530-mRNA-1:exon:18319;Parent=Msa0173530-mRNA-1
chr1_4	exon	58857708	58857863	58857708	ID=Msa0173530-mRNA-1:exon:18318;Parent=Msa0173530-mRNA-1
chr1_4	exon	58858782	58858892	58858782	ID=Msa0173530-mRNA-1:exon:18317;Parent=Msa0173530-mRNA-1
chr1_4	five_prime_UTR	58858787	58858892	58858787	ID=Msa0173530-mRNA-1:five_prime_utr;Parent=Msa0173530-mRNA-1
chr1_4	CDS	58858782	58858786	58858782	ID=Msa0173530-mRNA-1:cds;Parent=Msa0173530-mRNA-1
chr1_4	CDS	58857708	58857863	58857708	ID=Msa0173530-mRNA-1:cds;Parent=Msa0173530-mRNA-1
chr1_4	CDS	58857489	58857615	58857489	ID=Msa0173530-mRNA-1:cds;Parent=Msa0173530-mRNA-1
chr1_4	CDS	58857200	58857340	58857200	ID=Msa0173530-mRNA-1:cds;Parent=Msa0173530-mRNA-1
chr1_4	three_prime_UTR	58856836	58857199	58856836	ID=Msa0173530-mRNA-1:three_prime_utr;Parent=Msa0173530-mRNA-1

Gene Sequence

>Msa0173530

ATGGGGAAGACACATGGAATGGGAGCTGCTCGCAAGCTGAAGTCTCACCGCAGGAGGCAAAGGTGGGCTGACAAGTCATACAAGAAGTCTCATCTTGGGAATGAGTGGAAGAAACCTTTTGCTGGTTCTTCCCACGCAAAGGGAATTGTCCTCGAAAAGATTGGTATTGAGGCTAAACAGCCCAATTCAGCTATTCGTAAGTGTGCCAGGGTACAACTAATCAAGAATGGAAAGAAAATTGCTGCCTTTGTTCCCAATGATGGTTGTCTAAACTACATCGAAGAAAATGATGAAGTTTTGATTGCTGGATTTGGAAGAAAGGGTCATGCTGTGGGAGATATTCCTGGAGTTAGATTCAAAGTTGTGAAGGTCTCTGGGGTGTCTCTTCTTGCCCTTTTCAAGGAGAAGAAGGAGAAGCCAAGATCTTAG

Protein sequence

>Msa0173530

MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS*