Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313920 | PNY18001.1 | 78.869 | 336 | 70 | 1 | 1 | 336 | 1 | 335 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313920 | sp|Q9FJ47|SAG12_ARATH | 47.522 | 343 | 171 | 6 | 1 | 336 | 6 | 346 | 8.46e-109 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021460 | Msa0313920 | 0.806724 | 7.157280e-50 | -8.615850e-47 |
| Msa0033340 | Msa0313920 | 0.836998 | 6.734459e-57 | -8.615850e-47 |
| Msa0054260 | Msa0313920 | 0.803366 | 3.607358e-49 | -8.615850e-47 |
| Msa0055690 | Msa0313920 | 0.821828 | 3.281242e-53 | -8.615850e-47 |
| Msa0055730 | Msa0313920 | 0.837594 | 4.740503e-57 | -8.615850e-47 |
| Msa0078660 | Msa0313920 | 0.821464 | 3.982423e-53 | -8.615850e-47 |
| Msa0100080 | Msa0313920 | 0.804164 | 2.462989e-49 | -8.615850e-47 |
| Msa0100090 | Msa0313920 | 0.804068 | 2.578905e-49 | -8.615850e-47 |
| Msa0126380 | Msa0313920 | 0.806900 | 6.570265e-50 | -8.615850e-47 |
| Msa0142230 | Msa0313920 | 0.812216 | 4.740317e-51 | -8.615850e-47 |
| Msa0153430 | Msa0313920 | 0.804213 | 2.406315e-49 | -8.615850e-47 |
| Msa0193010 | Msa0313920 | 0.838424 | 2.899762e-57 | -8.615850e-47 |
| Msa0197660 | Msa0313920 | 0.803184 | 3.934988e-49 | -8.615850e-47 |
| Msa0212310 | Msa0313920 | 0.802704 | 4.943469e-49 | -8.615850e-47 |
| Msa0235190 | Msa0313920 | 0.880511 | 5.166790e-70 | -8.615850e-47 |
| Msa0239800 | Msa0313920 | 0.802678 | 5.004846e-49 | -8.615850e-47 |
| Msa0242270 | Msa0313920 | 0.805963 | 1.035552e-49 | -8.615850e-47 |
| Msa0273570 | Msa0313920 | 0.854930 | 8.867260e-62 | -8.615850e-47 |
| Msa0273580 | Msa0313920 | 0.905720 | 3.186210e-80 | -8.615850e-47 |
| Msa0313780 | Msa0313920 | 0.924715 | 4.864020e-90 | -8.615850e-47 |
| Msa0313920 | Msa0317510 | 0.802939 | 4.420779e-49 | -8.615850e-47 |
| Msa0313920 | Msa0347180 | 0.817267 | 3.603884e-52 | -8.615850e-47 |
| Msa0313920 | Msa0350670 | 0.835449 | 1.666887e-56 | -8.615850e-47 |
| Msa0313920 | Msa0352000 | 0.803879 | 2.823223e-49 | -8.615850e-47 |
| Msa0313920 | Msa0363980 | 0.837707 | 4.434837e-57 | -8.615850e-47 |
| Msa0313920 | Msa0365810 | 0.804514 | 2.082843e-49 | -8.615850e-47 |
| Msa0313920 | Msa0380040 | 0.801989 | 6.940036e-49 | -8.615850e-47 |
| Msa0313920 | Msa0389280 | 0.810756 | 9.839950e-51 | -8.615850e-47 |
| Msa0313920 | Msa0393650 | 0.802123 | 6.514298e-49 | -8.615850e-47 |
| Msa0313920 | Msa0408630 | 0.804077 | 2.568221e-49 | -8.615850e-47 |
| Msa0313920 | Msa0452410 | 0.826239 | 3.025071e-54 | -8.615850e-47 |
| Msa0313920 | Msa0458700 | 0.820280 | 7.457731e-53 | -8.615850e-47 |
| Msa0313920 | Msa0488940 | 0.800116 | 1.676185e-48 | -8.615850e-47 |
| Msa0313920 | Msa0512420 | 0.816008 | 6.899116e-52 | -8.615850e-47 |
| Msa0313920 | Msa0533430 | 0.821568 | 3.767899e-53 | -8.615850e-47 |
| Msa0313920 | Msa0580610 | 0.849630 | 2.859185e-60 | -8.615850e-47 |
| Msa0313920 | Msa0584130 | 0.859069 | 5.336967e-63 | -8.615850e-47 |
| Msa0313920 | Msa0623080 | 0.810074 | 1.381304e-50 | -8.615850e-47 |
| Msa0313920 | Msa0638280 | 0.818323 | 2.081427e-52 | -8.615850e-47 |
| Msa0313920 | Msa0638320 | 0.802859 | 4.594141e-49 | -8.615850e-47 |
| Msa0313920 | Msa0642180 | 0.800461 | 1.425912e-48 | -8.615850e-47 |
| Msa0313920 | Msa0650260 | 0.805047 | 1.611760e-49 | -8.615850e-47 |
| Msa0313920 | Msa0668150 | 0.818286 | 2.122313e-52 | -8.615850e-47 |
| Msa0313920 | Msa0689010 | 0.809119 | 2.214429e-50 | -8.615850e-47 |
| Msa0313920 | Msa0692170 | 0.817835 | 2.683880e-52 | -8.615850e-47 |
| Msa0313920 | Msa0737520 | 0.802911 | 4.480126e-49 | -8.615850e-47 |
| Msa0313920 | Msa0754180 | 0.804420 | 2.178516e-49 | -8.615850e-47 |
| Msa0313920 | Msa0776720 | 0.830757 | 2.453056e-55 | -8.615850e-47 |
| Msa0313920 | Msa0784580 | 0.815399 | 9.432282e-52 | -8.615850e-47 |
| Msa0313920 | Msa0815320 | 0.807862 | 4.107473e-50 | -8.615850e-47 |
| Msa0313920 | Msa0818010 | 0.835137 | 1.999339e-56 | -8.615850e-47 |
| Msa0313920 | Msa0858360 | 0.807223 | 5.615161e-50 | -8.615850e-47 |
| Msa0313920 | Msa0865370 | 0.802595 | 5.207222e-49 | -8.615850e-47 |
| Msa0313920 | Msa0865390 | 0.810904 | 9.140290e-51 | -8.615850e-47 |
| Msa0313920 | Msa0870620 | 0.802478 | 5.503326e-49 | -8.615850e-47 |
| Msa0313920 | Msa0883370 | 0.812688 | 3.738568e-51 | -8.615850e-47 |
| Msa0313920 | Msa0898370 | 0.810089 | 1.370994e-50 | -8.615850e-47 |
| Msa0313920 | Msa0905720 | 0.814895 | 1.220495e-51 | -8.615850e-47 |
| Msa0313920 | Msa0912500 | 0.810429 | 1.158091e-50 | -8.615850e-47 |
| Msa0313920 | Msa0965750 | 0.806099 | 9.695906e-50 | -8.615850e-47 |
| Msa0313920 | Msa1002300 | 0.804483 | 2.114507e-49 | -8.615850e-47 |
| Msa0313920 | Msa1006250 | 0.822757 | 1.996504e-53 | -8.615850e-47 |
| Msa0313920 | Msa1020720 | 0.815071 | 1.115714e-51 | -8.615850e-47 |
| Msa0313920 | Msa1026760 | 0.801169 | 1.021999e-48 | -8.615850e-47 |
| Msa0313920 | Msa1027240 | 0.849290 | 3.555752e-60 | -8.615850e-47 |
| Msa0313920 | Msa1027290 | 0.834239 | 3.361963e-56 | -8.615850e-47 |
| Msa0313920 | Msa1077950 | 0.848838 | 4.749027e-60 | -8.615850e-47 |
| Msa0313920 | Msa1107800 | 0.833078 | 6.557350e-56 | -8.615850e-47 |
| Msa0313920 | Msa1139410 | 0.806641 | 7.452451e-50 | -8.615850e-47 |
| Msa0313920 | Msa1195920 | 0.809746 | 1.624992e-50 | -8.615850e-47 |
| Msa0313920 | Msa1195970 | 0.808439 | 3.095547e-50 | -8.615850e-47 |
| Msa0313920 | Msa1198090 | 0.837009 | 6.692800e-57 | -8.615850e-47 |
| Msa0313920 | Msa1308580 | 0.804990 | 1.656530e-49 | -8.615850e-47 |
| Msa0313920 | Msa1308620 | 0.818964 | 1.489064e-52 | -8.615850e-47 |
| Msa0313920 | Msa1310210 | 0.805205 | 1.493887e-49 | -8.615850e-47 |
| Msa0313920 | Msa1359820 | 0.806360 | 8.542607e-50 | -8.615850e-47 |
| Msa0313920 | Msa1384290 | 0.811752 | 5.983988e-51 | -8.615850e-47 |
| Msa0313920 | Msa1396830 | 0.833667 | 4.675395e-56 | -8.615850e-47 |
| Msa0313920 | Msa1419010 | 0.815390 | 9.476401e-52 | -8.615850e-47 |
| Msa0313920 | Msa1423990 | 0.827308 | 1.681156e-54 | -8.615850e-47 |
| Msa0313920 | Msa1444370 | 0.840486 | 8.447995e-58 | -8.615850e-47 |
| Msa0313920 | Msa1461250 | -0.801234 | 9.912749e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313920 | MtrunA17_Chr2g0283671 | 90.830 | 229 | 20 | 1 | 108 | 336 | 1 | 228 | 4.32e-148 | 416 |
| Msa0313920 | MtrunA17_Chr5g0405751 | 53.412 | 337 | 149 | 5 | 3 | 335 | 11 | 343 | 3.03e-122 | 355 |
| Msa0313920 | MtrunA17_Chr4g0041061 | 53.916 | 332 | 145 | 6 | 9 | 335 | 16 | 344 | 9.96e-122 | 353 |
| Msa0313920 | MtrunA17_Chr4g0060251 | 52.478 | 343 | 152 | 5 | 2 | 335 | 4 | 344 | 1.44e-121 | 353 |
| Msa0313920 | MtrunA17_Chr4g0040881 | 54.601 | 326 | 140 | 6 | 15 | 335 | 22 | 344 | 6.16e-121 | 352 |
| Msa0313920 | MtrunA17_Chr4g0041081 | 53.681 | 326 | 143 | 6 | 15 | 335 | 22 | 344 | 9.12e-121 | 351 |
| Msa0313920 | MtrunA17_Chr4g0024411 | 53.231 | 325 | 145 | 5 | 15 | 335 | 21 | 342 | 1.20e-116 | 340 |
| Msa0313920 | MtrunA17_Chr2g0315491 | 50.150 | 333 | 153 | 4 | 9 | 335 | 15 | 340 | 3.59e-109 | 322 |
| Msa0313920 | MtrunA17_Chr4g0041471 | 47.164 | 335 | 160 | 5 | 9 | 334 | 14 | 340 | 4.62e-109 | 321 |
| Msa0313920 | MtrunA17_Chr4g0041521 | 49.375 | 320 | 152 | 6 | 20 | 335 | 26 | 339 | 1.26e-103 | 307 |
| Msa0313920 | MtrunA17_Chr4g0041481 | 48.438 | 320 | 155 | 6 | 20 | 335 | 26 | 339 | 2.44e-102 | 304 |
| Msa0313920 | MtrunA17_Chr2g0311381 | 47.765 | 358 | 158 | 13 | 1 | 336 | 1 | 351 | 2.26e-100 | 300 |
| Msa0313920 | MtrunA17_Chr1g0208261 | 49.051 | 316 | 152 | 6 | 25 | 334 | 82 | 394 | 2.96e-97 | 297 |
| Msa0313920 | MtrunA17_Chr2g0325121 | 45.058 | 344 | 170 | 9 | 1 | 334 | 1 | 335 | 9.73e-97 | 290 |
| Msa0313920 | MtrunA17_Chr3g0134231 | 46.131 | 336 | 165 | 9 | 10 | 334 | 30 | 360 | 6.85e-96 | 292 |
| Msa0313920 | MtrunA17_Chr4g0040851 | 44.000 | 350 | 170 | 8 | 4 | 336 | 20 | 360 | 2.54e-95 | 287 |
| Msa0313920 | MtrunA17_Chr2g0311471 | 46.686 | 347 | 167 | 9 | 1 | 333 | 1 | 343 | 6.68e-95 | 285 |
| Msa0313920 | MtrunA17_Chr2g0311391 | 44.327 | 379 | 159 | 14 | 1 | 335 | 1 | 371 | 1.02e-93 | 283 |
| Msa0313920 | MtrunA17_Chr3g0144281 | 45.860 | 314 | 162 | 6 | 25 | 335 | 39 | 347 | 1.68e-93 | 282 |
| Msa0313920 | MtrunA17_Chr4g0053311 | 42.566 | 343 | 184 | 7 | 4 | 335 | 1 | 341 | 2.37e-93 | 282 |
| Msa0313920 | MtrunA17_Chr2g0319991 | 43.824 | 340 | 176 | 7 | 4 | 336 | 13 | 344 | 3.49e-93 | 281 |
| Msa0313920 | MtrunA17_Chr7g0248391 | 46.154 | 312 | 155 | 5 | 28 | 336 | 37 | 338 | 4.85e-93 | 280 |
| Msa0313920 | MtrunA17_Chr3g0116551 | 42.262 | 336 | 187 | 6 | 4 | 334 | 10 | 343 | 3.47e-91 | 276 |
| Msa0313920 | MtrunA17_Chr4g0058081 | 44.186 | 344 | 178 | 8 | 1 | 334 | 3 | 342 | 1.32e-90 | 275 |
| Msa0313920 | MtrunA17_Chr3g0142071 | 45.223 | 314 | 151 | 6 | 34 | 335 | 51 | 355 | 3.46e-90 | 277 |
| Msa0313920 | MtrunA17_Chr7g0248811 | 43.109 | 341 | 172 | 6 | 4 | 336 | 10 | 336 | 4.62e-89 | 270 |
| Msa0313920 | MtrunA17_Chr2g0283661 | 77.215 | 158 | 36 | 0 | 1 | 158 | 1 | 158 | 4.38e-87 | 263 |
| Msa0313920 | MtrunA17_Chr2g0283661 | 54.839 | 155 | 65 | 1 | 187 | 336 | 118 | 272 | 6.65e-53 | 175 |
| Msa0313920 | MtrunA17_Chr1g0153011 | 44.337 | 309 | 151 | 6 | 29 | 334 | 51 | 341 | 1.76e-84 | 262 |
| Msa0313920 | MtrunA17_Chr2g0283901 | 41.615 | 322 | 178 | 7 | 20 | 335 | 38 | 355 | 6.37e-75 | 239 |
| Msa0313920 | MtrunA17_Chr1g0156161 | 45.455 | 275 | 123 | 8 | 63 | 333 | 10 | 261 | 2.14e-72 | 225 |
| Msa0313920 | MtrunA17_Chr2g0283741 | 37.152 | 323 | 192 | 6 | 20 | 335 | 40 | 358 | 4.47e-70 | 223 |
| Msa0313920 | MtrunA17_Chr8g0379151 | 39.776 | 357 | 176 | 14 | 4 | 335 | 30 | 372 | 5.90e-68 | 217 |
| Msa0313920 | MtrunA17_Chr0c27g0493921 | 40.308 | 325 | 173 | 12 | 20 | 336 | 38 | 349 | 4.02e-66 | 212 |
| Msa0313920 | MtrunA17_Chr4g0070441 | 40.594 | 303 | 163 | 10 | 20 | 314 | 38 | 331 | 2.16e-62 | 202 |
| Msa0313920 | MtrunA17_Chr4g0035551 | 38.944 | 303 | 145 | 10 | 39 | 316 | 54 | 341 | 8.19e-62 | 201 |
| Msa0313920 | MtrunA17_Chr1g0155781 | 38.644 | 295 | 158 | 8 | 39 | 316 | 57 | 345 | 4.25e-60 | 196 |
| Msa0313920 | MtrunA17_Chr1g0199131 | 38.730 | 315 | 163 | 12 | 36 | 329 | 59 | 364 | 1.25e-59 | 196 |
| Msa0313920 | MtrunA17_Chr2g0311091 | 51.087 | 184 | 77 | 2 | 1 | 171 | 1 | 184 | 8.72e-57 | 182 |
| Msa0313920 | MtrunA17_Chr4g0036731 | 35.461 | 282 | 148 | 9 | 39 | 316 | 54 | 305 | 7.98e-44 | 153 |
| Msa0313920 | MtrunA17_Chr4g0036281 | 33.566 | 286 | 152 | 9 | 39 | 316 | 54 | 309 | 1.58e-41 | 147 |
| Msa0313920 | MtrunA17_Chr4g0037291 | 33.566 | 286 | 152 | 9 | 39 | 316 | 95 | 350 | 3.55e-41 | 147 |
| Msa0313920 | MtrunA17_Chr2g0283751 | 35.200 | 250 | 153 | 6 | 20 | 264 | 40 | 285 | 6.06e-41 | 145 |
| Msa0313920 | MtrunA17_Chr7g0248421 | 47.059 | 153 | 76 | 2 | 145 | 295 | 57 | 206 | 4.07e-39 | 137 |
| Msa0313920 | MtrunA17_Chr7g0248371 | 53.608 | 97 | 45 | 0 | 238 | 334 | 34 | 130 | 4.10e-31 | 115 |
| Msa0313920 | MtrunA17_Chr1g0156771 | 46.825 | 126 | 62 | 4 | 99 | 220 | 32 | 156 | 1.89e-29 | 110 |
| Msa0313920 | MtrunA17_Chr7g0271031 | 25.634 | 355 | 223 | 11 | 7 | 329 | 35 | 380 | 4.94e-27 | 110 |
| Msa0313920 | MtrunA17_Chr7g0271041 | 27.815 | 302 | 187 | 11 | 50 | 327 | 36 | 330 | 8.43e-26 | 105 |
| Msa0313920 | MtrunA17_Chr7g0248661 | 55.405 | 74 | 33 | 0 | 261 | 334 | 2 | 75 | 2.52e-23 | 91.7 |
| Msa0313920 | MtrunA17_Chr1g0167291 | 45.833 | 120 | 56 | 4 | 1 | 115 | 1 | 116 | 4.08e-23 | 92.8 |
| Msa0313920 | MtrunA17_Chr1g0147901 | 48.387 | 93 | 41 | 3 | 4 | 90 | 3 | 94 | 4.70e-18 | 79.7 |
| Msa0313920 | MtrunA17_Chr8g0379671 | 34.646 | 127 | 76 | 3 | 162 | 287 | 23 | 143 | 9.82e-16 | 73.9 |
| Msa0313920 | MtrunA17_Chr4g0011011 | 52.857 | 70 | 29 | 2 | 4 | 69 | 3 | 72 | 8.79e-15 | 68.9 |
| Msa0313920 | MtrunA17_Chr1g0156701 | 45.070 | 71 | 38 | 1 | 23 | 93 | 37 | 106 | 1.75e-14 | 69.3 |
| Msa0313920 | MtrunA17_Chr1g0156691 | 45.161 | 62 | 33 | 1 | 23 | 84 | 37 | 97 | 6.01e-14 | 67.0 |
| Msa0313920 | MtrunA17_Chr3g0120601 | 25.962 | 208 | 133 | 7 | 124 | 314 | 3 | 206 | 8.35e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313920 | AT2G34080.1 | 52.059 | 340 | 153 | 6 | 4 | 335 | 7 | 344 | 4.41e-120 | 350 |
| Msa0313920 | AT3G49340.1 | 49.704 | 338 | 155 | 4 | 10 | 334 | 4 | 339 | 1.13e-115 | 338 |
| Msa0313920 | AT2G27420.1 | 50.289 | 346 | 160 | 6 | 1 | 334 | 1 | 346 | 3.29e-115 | 337 |
| Msa0313920 | AT1G29090.1 | 50.588 | 340 | 158 | 7 | 4 | 335 | 17 | 354 | 4.75e-111 | 327 |
| Msa0313920 | AT5G45890.1 | 47.522 | 343 | 171 | 6 | 1 | 336 | 6 | 346 | 8.60e-110 | 323 |
| Msa0313920 | AT1G29080.1 | 51.111 | 315 | 146 | 5 | 27 | 335 | 33 | 345 | 6.89e-107 | 316 |
| Msa0313920 | AT3G19390.1 | 45.322 | 342 | 167 | 6 | 4 | 335 | 14 | 345 | 1.34e-99 | 301 |
| Msa0313920 | AT4G35350.1 | 45.588 | 340 | 172 | 7 | 5 | 335 | 17 | 352 | 1.31e-96 | 290 |
| Msa0313920 | AT4G23520.1 | 45.748 | 341 | 166 | 9 | 9 | 334 | 12 | 348 | 4.52e-96 | 289 |
| Msa0313920 | AT1G20850.1 | 46.006 | 313 | 165 | 4 | 25 | 335 | 43 | 353 | 3.22e-95 | 287 |
| Msa0313920 | AT1G29110.1 | 47.516 | 322 | 146 | 9 | 23 | 336 | 28 | 334 | 4.00e-95 | 286 |
| Msa0313920 | AT5G43060.1 | 46.835 | 316 | 157 | 6 | 25 | 334 | 42 | 352 | 9.42e-95 | 289 |
| Msa0313920 | AT3G48340.1 | 45.376 | 346 | 173 | 10 | 1 | 334 | 1 | 342 | 8.32e-94 | 283 |
| Msa0313920 | AT5G50260.1 | 44.058 | 345 | 178 | 8 | 1 | 334 | 1 | 341 | 3.30e-93 | 282 |
| Msa0313920 | AT1G09850.1 | 46.129 | 310 | 158 | 5 | 29 | 334 | 28 | 332 | 4.83e-93 | 284 |
| Msa0313920 | AT1G47128.1 | 44.479 | 317 | 162 | 8 | 25 | 334 | 42 | 351 | 1.18e-91 | 281 |
| Msa0313920 | AT4G11310.1 | 44.904 | 314 | 164 | 7 | 25 | 334 | 43 | 351 | 2.16e-91 | 277 |
| Msa0313920 | AT4G11320.2 | 45.574 | 305 | 159 | 6 | 34 | 334 | 57 | 358 | 1.77e-90 | 275 |
| Msa0313920 | AT4G11320.1 | 45.574 | 305 | 159 | 6 | 34 | 334 | 57 | 358 | 1.77e-90 | 275 |
| Msa0313920 | AT4G36880.1 | 44.237 | 321 | 167 | 7 | 25 | 334 | 41 | 360 | 3.25e-90 | 275 |
| Msa0313920 | AT3G19400.1 | 44.795 | 317 | 165 | 6 | 25 | 335 | 36 | 348 | 1.61e-89 | 273 |
| Msa0313920 | AT3G48350.1 | 44.620 | 316 | 168 | 6 | 25 | 335 | 30 | 343 | 5.94e-87 | 266 |
| Msa0313920 | AT1G06260.1 | 42.308 | 338 | 179 | 7 | 7 | 334 | 10 | 341 | 8.73e-83 | 254 |
| Msa0313920 | AT3G43960.1 | 42.136 | 337 | 179 | 9 | 5 | 334 | 18 | 345 | 4.96e-81 | 251 |
| Msa0313920 | AT5G60360.1 | 41.538 | 325 | 171 | 11 | 19 | 336 | 45 | 357 | 4.20e-69 | 220 |
| Msa0313920 | AT5G60360.2 | 40.923 | 325 | 172 | 10 | 19 | 336 | 45 | 356 | 1.86e-67 | 216 |
| Msa0313920 | AT4G35350.2 | 44.280 | 271 | 139 | 6 | 5 | 266 | 17 | 284 | 4.46e-67 | 213 |
| Msa0313920 | AT5G60360.3 | 41.254 | 303 | 163 | 9 | 19 | 314 | 45 | 339 | 1.13e-64 | 209 |
| Msa0313920 | AT4G39090.1 | 38.514 | 296 | 157 | 9 | 39 | 316 | 57 | 345 | 1.81e-62 | 203 |
| Msa0313920 | AT3G45310.1 | 40.062 | 322 | 174 | 11 | 22 | 336 | 48 | 357 | 3.22e-62 | 202 |
| Msa0313920 | AT3G45310.2 | 39.441 | 322 | 175 | 10 | 22 | 336 | 48 | 356 | 1.24e-60 | 198 |
| Msa0313920 | AT2G21430.1 | 37.179 | 312 | 170 | 10 | 25 | 316 | 37 | 342 | 2.32e-59 | 195 |
| Msa0313920 | AT3G19400.2 | 42.276 | 246 | 133 | 5 | 25 | 264 | 36 | 278 | 5.32e-59 | 192 |
| Msa0313920 | AT3G54940.2 | 39.735 | 302 | 153 | 11 | 36 | 316 | 54 | 347 | 7.42e-59 | 194 |
| Msa0313920 | AT4G16190.1 | 37.419 | 310 | 161 | 8 | 39 | 327 | 61 | 358 | 4.21e-56 | 187 |
| Msa0313920 | AT3G48350.2 | 42.449 | 245 | 134 | 6 | 25 | 264 | 30 | 272 | 4.25e-55 | 182 |
| Msa0313920 | AT3G54940.3 | 37.991 | 229 | 124 | 6 | 36 | 252 | 54 | 276 | 5.80e-43 | 150 |
| Msa0313920 | AT1G02305.1 | 26.599 | 297 | 183 | 8 | 62 | 329 | 49 | 339 | 2.81e-27 | 110 |
| Msa0313920 | AT4G01610.1 | 27.703 | 296 | 173 | 11 | 62 | 327 | 46 | 330 | 6.14e-27 | 109 |
| Msa0313920 | AT4G01610.2 | 27.027 | 296 | 175 | 11 | 62 | 327 | 46 | 330 | 5.54e-25 | 103 |
| Msa0313920 | AT1G02300.1 | 30.476 | 210 | 119 | 7 | 140 | 327 | 146 | 350 | 4.92e-20 | 90.5 |
| Msa0313920 | AT2G22160.1 | 44.828 | 87 | 41 | 3 | 56 | 140 | 17 | 98 | 3.91e-14 | 68.2 |
Find 76 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCATTTGATCATTTAAT+TGG | 0.195265 | 2_4:+9411295 | None:intergenic |
| TCACTGGTTAAATCAGAATA+TGG | 0.286491 | 2_4:+9413057 | None:intergenic |
| ATATTCTGCCTACATATAAA+TGG | 0.293507 | 2_4:-9410810 | Msa0313920:three_prime_UTR |
| TTAAATCAGAATATGGATTT+AGG | 0.297132 | 2_4:+9413064 | None:intergenic |
| GTCTGTCTACCTTCTTGATA+TGG | 0.302035 | 2_4:+9411321 | None:intergenic |
| TACATGGGAGATGTTTATTC+AGG | 0.305565 | 2_4:-9411153 | Msa0313920:CDS |
| GAGTTTATTGCTTCACATAC+TGG | 0.311986 | 2_4:-9413033 | Msa0313920:CDS |
| ATTGGTTGATTAAGAATTCT+TGG | 0.312011 | 2_4:-9411059 | Msa0313920:CDS |
| CAGCAATGGATGATAAAATA+TGG | 0.313356 | 2_4:-9413198 | Msa0313920:CDS |
| AGAATTCTTGGGGTAAAGAT+TGG | 0.334902 | 2_4:-9411047 | Msa0313920:CDS |
| ATTCGTATACAAATATTATA+TGG | 0.367051 | 2_4:+9410939 | None:intergenic |
| TTGGTTGATTAAGAATTCTT+GGG | 0.374775 | 2_4:-9411058 | Msa0313920:CDS |
| GAATTCTTGGGGTAAAGATT+GGG | 0.376941 | 2_4:-9411046 | Msa0313920:CDS |
| TGGGTGTGGTGGAGGTAATA+TGG | 0.384068 | 2_4:-9411400 | Msa0313920:CDS |
| CTCATTATCTGAGCAACAAT+TGG | 0.401955 | 2_4:-9411445 | Msa0313920:CDS |
| TGCTTACTATTGTGGATGTA+TGG | 0.402458 | 2_4:-9410764 | Msa0313920:three_prime_UTR |
| ACTGCAATGCCAACTGATAC+TGG | 0.406208 | 2_4:+9411195 | None:intergenic |
| TAGCAGTTGTTGTTCATCAT+TGG | 0.413217 | 2_4:+9411236 | None:intergenic |
| TTGGAAGAAGAAAGTTGGTT+AGG | 0.433566 | 2_4:+9413000 | None:intergenic |
| TCAGTCGTAGCTGCTGTAGA+AGG | 0.446164 | 2_4:-9411498 | Msa0313920:CDS |
| TATTATATTGCTTACTATTG+TGG | 0.446413 | 2_4:-9410772 | Msa0313920:three_prime_UTR |
| GGTTTGTATTATATATTTGA+AGG | 0.448659 | 2_4:+9411371 | None:intergenic |
| GGTAAAGATTGGGGTGAAGA+AGG | 0.460104 | 2_4:-9411036 | Msa0313920:CDS |
| TGATGAATTTCAACATTACA+TGG | 0.464191 | 2_4:-9411169 | Msa0313920:CDS |
| TGTCTCACTAACAATACCTT+GGG | 0.465163 | 2_4:+9411350 | None:intergenic |
| AAGCAAAGAGCTTCATCAAA+AGG | 0.468278 | 2_4:+9410860 | Msa0313910:CDS |
| AATATCATCATTCAGGTTGA+AGG | 0.470988 | 2_4:+9412957 | None:intergenic |
| GCAGTTACTGCAGTTGGTTA+CGG | 0.478465 | 2_4:-9411105 | Msa0313920:CDS |
| TATTGCAACTGACCTCATCT+TGG | 0.484425 | 2_4:+9412981 | None:intergenic |
| CTGTCTCACTAACAATACCT+TGG | 0.493668 | 2_4:+9411349 | None:intergenic |
| AGTTGTTGTTCATCATTGGC+AGG | 0.496843 | 2_4:+9411240 | None:intergenic |
| TATAGTTACCACAACTGCCT+TGG | 0.504428 | 2_4:+9412884 | None:intergenic |
| AACCATGCAGTTACTGCAGT+TGG | 0.506721 | 2_4:-9411111 | Msa0313920:CDS |
| AGGTTACATGAAGTTGTTGA+GGG | 0.508816 | 2_4:-9411016 | Msa0313920:CDS |
| TGAAGCAATAAACTCTTCAC+TGG | 0.512575 | 2_4:+9413041 | None:intergenic |
| GCAATGCCACATTGACCTCC+TGG | 0.513337 | 2_4:+9410982 | None:intergenic |
| TTGAGGGAAAGTGGTGAACC+AGG | 0.520538 | 2_4:-9411000 | Msa0313920:CDS |
| CTGTTTCCATCATGATCTTG+TGG | 0.520879 | 2_4:-9413281 | Msa0313920:CDS |
| AACTTTCTTCTTCCAAGATG+AGG | 0.525404 | 2_4:-9412993 | Msa0313920:CDS |
| AATTCTTGGGGTAAAGATTG+GGG | 0.530447 | 2_4:-9411045 | Msa0313920:CDS |
| GGTTACGGTGTAAGTGAAGA+TGG | 0.532156 | 2_4:-9411090 | Msa0313920:CDS |
| GTGAAGATGGAACTAAGTAT+TGG | 0.533019 | 2_4:-9411077 | Msa0313920:CDS |
| GTTAAAGACCAAGGCAGTTG+TGG | 0.536089 | 2_4:-9412892 | Msa0313920:intron |
| ATGAAGTTGTTGAGGGAAAG+TGG | 0.542145 | 2_4:-9411009 | Msa0313920:CDS |
| CTGAGTTAGAGAAACGCAAA+AGG | 0.542307 | 2_4:-9413155 | Msa0313920:CDS |
| TCATCTTGGAAGAAGAAAGT+TGG | 0.545211 | 2_4:+9412995 | None:intergenic |
| CAGAACAATGGGTGTGGTGG+AGG | 0.560185 | 2_4:-9411408 | Msa0313920:CDS |
| TTCAGACAGTGTTCGAGACA+TGG | 0.563661 | 2_4:+9413242 | None:intergenic |
| CGTATACAAATATTATATGG+TGG | 0.574910 | 2_4:+9410942 | None:intergenic |
| AAGGTTACATGAAGTTGTTG+AGG | 0.582698 | 2_4:-9411017 | Msa0313920:CDS |
| GTATACAAATATTATATGGT+GGG | 0.582743 | 2_4:+9410943 | None:intergenic |
| ACTGCGATGAACAGAACAAT+GGG | 0.582764 | 2_4:-9411419 | Msa0313920:CDS |
| TTGTTGAAGCACATCAGCAA+TGG | 0.583298 | 2_4:-9413212 | Msa0313920:CDS |
| ATATCATCATTCAGGTTGAA+GGG | 0.586071 | 2_4:+9412958 | None:intergenic |
| TGGTTGATTAAGAATTCTTG+GGG | 0.586376 | 2_4:-9411057 | Msa0313920:CDS |
| CGTAACAAGAGTTACAAGCT+TGG | 0.588084 | 2_4:-9413087 | Msa0313920:CDS |
| TACGAATTTCAAAATATCAG+AGG | 0.592475 | 2_4:-9410923 | Msa0313920:three_prime_UTR |
| TTGTGGATGTATGGACTAAG+TGG | 0.599059 | 2_4:-9410755 | Msa0313920:three_prime_UTR |
| ACAGATTATCCATATCAAGA+AGG | 0.601748 | 2_4:-9411330 | Msa0313920:CDS |
| GATGTTTATTCAGGAACATG+TGG | 0.602261 | 2_4:-9411144 | Msa0313920:CDS |
| AACCAACTGCAGTAACTGCA+TGG | 0.607601 | 2_4:+9411109 | None:intergenic |
| GTTACTAATGTTAAAGACCA+AGG | 0.622785 | 2_4:-9412901 | Msa0313920:CDS |
| GTATCAGTTGGCATTGCAGT+CGG | 0.623362 | 2_4:-9411192 | Msa0313920:CDS |
| GATGAATTTCAACATTACAT+GGG | 0.623570 | 2_4:-9411168 | Msa0313920:CDS |
| AAAATTGATTGGAGACAACA+AGG | 0.627921 | 2_4:-9412928 | Msa0313920:CDS |
| GAACAGAACAATGGGTGTGG+TGG | 0.628748 | 2_4:-9411411 | Msa0313920:CDS |
| AAATGTCCACAAGATCATGA+TGG | 0.632055 | 2_4:+9413275 | None:intergenic |
| GCACAACAACCAGTATCAGT+TGG | 0.635741 | 2_4:-9411204 | Msa0313920:CDS |
| TTGCTGATGTGCTTCAACAA+CGG | 0.639015 | 2_4:+9413215 | None:intergenic |
| GGTGCTGTGAAAATCAAGAC+TGG | 0.639937 | 2_4:-9411477 | Msa0313920:CDS |
| AAATATATAATACAAACCCA+AGG | 0.655643 | 2_4:-9411366 | Msa0313920:CDS |
| GGTGAACCAGGAGGTCAATG+TGG | 0.664219 | 2_4:-9410988 | Msa0313920:CDS |
| GACTGCGATGAACAGAACAA+TGG | 0.669619 | 2_4:-9411420 | Msa0313920:CDS |
| TGTGGATGTATGGACTAAGT+GGG | 0.676007 | 2_4:-9410754 | Msa0313920:three_prime_UTR |
| GATGAACAGAACAATGGGTG+TGG | 0.700071 | 2_4:-9411414 | Msa0313920:CDS |
| AGGGAAAGTGGTGAACCAGG+AGG | 0.728920 | 2_4:-9410997 | Msa0313920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTGTAGTTAAATAT+AGG | + | chr2_4:9410787-9410806 | Msa0313910:intron | 10.0% |
| !!! | TTAGAAAATTATATGAATTT+TGG | + | chr2_4:9411634-9411653 | None:intergenic | 10.0% |
| !!! | TTATAACTCTATTTTTTTTT+TGG | - | chr2_4:9411967-9411986 | Msa0313920:intron | 10.0% |
| !! | AAATAAAACAATTAAAAACA+TGG | + | chr2_4:9412200-9412219 | None:intergenic | 10.0% |
| !!! | AATAATTTTTTCTTTTTTTG+GGG | - | chr2_4:9412306-9412325 | Msa0313920:intron | 10.0% |
| !!! | AAAGTTACATTTTAATATTA+TGG | - | chr2_4:9412462-9412481 | Msa0313920:intron | 10.0% |
| !! | ATATTCCAAAAAAAATTGAT+TGG | - | chr2_4:9411168-9411187 | Msa0313920:CDS | 15.0% |
| !! | AAAATTCTTAATTGCATAAT+TGG | + | chr2_4:9411346-9411365 | None:intergenic | 15.0% |
| !! | ATTTCATTTGATCATTTAAT+TGG | + | chr2_4:9412815-9412834 | None:intergenic | 15.0% |
| !! | ATTCGTATACAAATATTATA+TGG | + | chr2_4:9413171-9413190 | None:intergenic | 15.0% |
| !!! | TTATTTTTCCATTTATATGT+AGG | + | chr2_4:9413308-9413327 | None:intergenic | 15.0% |
| !!! | AAGAGAATGTTTTTTGAAAA+AGG | + | chr2_4:9410759-9410778 | Msa0313910:intron | 20.0% |
| !! | TTAAATCAGAATATGGATTT+AGG | + | chr2_4:9411046-9411065 | None:intergenic | 20.0% |
| !!! | TATTTTTTAGTTAGTCATCT+TGG | - | chr2_4:9411270-9411289 | Msa0313920:CDS | 20.0% |
| !!! | TTTTATGTTTCAAAATTCCA+TGG | + | chr2_4:9411297-9411316 | None:intergenic | 20.0% |
| !!! | TATGCAATTAAGAATTTTCA+TGG | - | chr2_4:9411348-9411367 | Msa0313920:CDS | 20.0% |
| !!! | TTTTGTGATATATAATGGAA+TGG | + | chr2_4:9411431-9411450 | None:intergenic | 20.0% |
| !!! | TTGGATTTTGTGATATATAA+TGG | + | chr2_4:9411436-9411455 | None:intergenic | 20.0% |
| !! | ATTAATATTGCATTGAAAAG+TGG | + | chr2_4:9411935-9411954 | None:intergenic | 20.0% |
| !!! | TATCATTCAATATGTTTTGT+AGG | - | chr2_4:9412570-9412589 | Msa0313920:intron | 20.0% |
| !! | GGTTTGTATTATATATTTGA+AGG | + | chr2_4:9412739-9412758 | None:intergenic | 20.0% |
| !! | AAATATATAATACAAACCCA+AGG | - | chr2_4:9412741-9412760 | Msa0313920:intron | 20.0% |
| !! | GTATACAAATATTATATGGT+GGG | + | chr2_4:9413167-9413186 | None:intergenic | 20.0% |
| !! | TATTATATTGCTTACTATTG+TGG | - | chr2_4:9413335-9413354 | Msa0313920:five_prime_UTR | 20.0% |
| !!! | TTTTTGGAATATCATCATTC+AGG | + | chr2_4:9411160-9411179 | None:intergenic | 25.0% |
| !!! | TGTCTCCAATCAATTTTTTT+TGG | + | chr2_4:9411176-9411195 | None:intergenic | 25.0% |
| !! | TAAAGTGTTTGGAAGATATT+TGG | + | chr2_4:9411455-9411474 | None:intergenic | 25.0% |
| ! | ATTCGATGGATGAATAAATA+TGG | + | chr2_4:9411710-9411729 | None:intergenic | 25.0% |
| ! | GCAAAAAGTTCAGTTATTAT+TGG | - | chr2_4:9412155-9412174 | Msa0313920:intron | 25.0% |
| ! | AAAGTTCAGTTATTATTGGA+CGG | - | chr2_4:9412159-9412178 | Msa0313920:intron | 25.0% |
| ! | TGATGAATTTCAACATTACA+TGG | - | chr2_4:9412938-9412957 | Msa0313920:CDS | 25.0% |
| ! | GATGAATTTCAACATTACAT+GGG | - | chr2_4:9412939-9412958 | Msa0313920:CDS | 25.0% |
| ! | ATTGGTTGATTAAGAATTCT+TGG | - | chr2_4:9413048-9413067 | Msa0313920:CDS | 25.0% |
| ! | TTGGTTGATTAAGAATTCTT+GGG | - | chr2_4:9413049-9413068 | Msa0313920:CDS | 25.0% |
| ! | CGTATACAAATATTATATGG+TGG | + | chr2_4:9413168-9413187 | None:intergenic | 25.0% |
| ! | TACGAATTTCAAAATATCAG+AGG | - | chr2_4:9413184-9413203 | Msa0313920:CDS | 25.0% |
| ! | ATATTCTGCCTACATATAAA+TGG | - | chr2_4:9413297-9413316 | Msa0313920:CDS | 25.0% |
| CAGCAATGGATGATAAAATA+TGG | - | chr2_4:9410909-9410928 | Msa0313920:three_prime_UTR | 30.0% | |
| ! | TCACTGGTTAAATCAGAATA+TGG | + | chr2_4:9411053-9411072 | None:intergenic | 30.0% |
| !! | ATATCATCATTCAGGTTGAA+GGG | + | chr2_4:9411152-9411171 | None:intergenic | 30.0% |
| !! | AATATCATCATTCAGGTTGA+AGG | + | chr2_4:9411153-9411172 | None:intergenic | 30.0% |
| AAAATTGATTGGAGACAACA+AGG | - | chr2_4:9411179-9411198 | Msa0313920:CDS | 30.0% | |
| GTTACTAATGTTAAAGACCA+AGG | - | chr2_4:9411206-9411225 | Msa0313920:CDS | 30.0% | |
| !! | TTTTCATGGATTGAATGACA+TGG | - | chr2_4:9411362-9411381 | Msa0313920:CDS | 30.0% |
| ! | TGTGCTTCATTTAAAGTGTT+TGG | + | chr2_4:9411466-9411485 | None:intergenic | 30.0% |
| TGATGTGTTTATGTGGTATT+TGG | + | chr2_4:9411498-9411517 | None:intergenic | 30.0% | |
| !! | GTAGTATTGATGTGTTTATG+TGG | + | chr2_4:9411505-9411524 | None:intergenic | 30.0% |
| ATGGATCAGTTAATTTAGGA+CGG | + | chr2_4:9411874-9411893 | None:intergenic | 30.0% | |
| GCAAATGGATCAGTTAATTT+AGG | + | chr2_4:9411878-9411897 | None:intergenic | 30.0% | |
| !!! | GACAATTTTTTGTGTGCAAA+TGG | + | chr2_4:9411893-9411912 | None:intergenic | 30.0% |
| !! | TGGAATGAGTCAGTTATTTT+AGG | + | chr2_4:9411915-9411934 | None:intergenic | 30.0% |
| TTAAGTGTCTTGTCAAGTAT+TGG | + | chr2_4:9412078-9412097 | None:intergenic | 30.0% | |
| GTAAAAGAGAGAGAGAAAAA+CGG | + | chr2_4:9412102-9412121 | None:intergenic | 30.0% | |
| TAAGGAGAAAATTGAACAAG+CGG | - | chr2_4:9412222-9412241 | Msa0313920:intron | 30.0% | |
| ! | TATGTTTTGTAGGATGTTGT+TGG | - | chr2_4:9412580-9412599 | Msa0313920:intron | 30.0% |
| ! | ATGTTTTGTAGGATGTTGTT+GGG | - | chr2_4:9412581-9412600 | Msa0313920:intron | 30.0% |
| ACAGATTATCCATATCAAGA+AGG | - | chr2_4:9412777-9412796 | Msa0313920:intron | 30.0% | |
| TGGTTGATTAAGAATTCTTG+GGG | - | chr2_4:9413050-9413069 | Msa0313920:CDS | 30.0% | |
| AAATGTCCACAAGATCATGA+TGG | + | chr2_4:9410835-9410854 | Msa0313910:CDS | 35.0% | |
| TGAAGCAATAAACTCTTCAC+TGG | + | chr2_4:9411069-9411088 | None:intergenic | 35.0% | |
| GAGTTTATTGCTTCACATAC+TGG | - | chr2_4:9411074-9411093 | Msa0313920:CDS | 35.0% | |
| ! | TTGGAAGAAGAAAGTTGGTT+AGG | + | chr2_4:9411110-9411129 | None:intergenic | 35.0% |
| TCATCTTGGAAGAAGAAAGT+TGG | + | chr2_4:9411115-9411134 | None:intergenic | 35.0% | |
| AACTTTCTTCTTCCAAGATG+AGG | - | chr2_4:9411114-9411133 | Msa0313920:CDS | 35.0% | |
| TTCATCCATCGAATATCGAA+AGG | - | chr2_4:9411716-9411735 | Msa0313920:intron | 35.0% | |
| TCATCCATCGAATATCGAAA+GGG | - | chr2_4:9411717-9411736 | Msa0313920:intron | 35.0% | |
| AATACCCTTTCGATATTCGA+TGG | + | chr2_4:9411724-9411743 | None:intergenic | 35.0% | |
| TTCAGTTATTATTGGACGGA+TGG | - | chr2_4:9412163-9412182 | Msa0313920:intron | 35.0% | |
| ACAAGGACACCTAATTTGAT+CGG | - | chr2_4:9412394-9412413 | Msa0313920:intron | 35.0% | |
| TCACAAACACCGATCAAATT+AGG | + | chr2_4:9412406-9412425 | None:intergenic | 35.0% | |
| CTCATTATCTGAGCAACAAT+TGG | - | chr2_4:9412662-9412681 | Msa0313920:intron | 35.0% | |
| TGTCTCACTAACAATACCTT+GGG | + | chr2_4:9412760-9412779 | None:intergenic | 35.0% | |
| ! | TAGCAGTTGTTGTTCATCAT+TGG | + | chr2_4:9412874-9412893 | None:intergenic | 35.0% |
| TACATGGGAGATGTTTATTC+AGG | - | chr2_4:9412954-9412973 | Msa0313920:CDS | 35.0% | |
| GATGTTTATTCAGGAACATG+TGG | - | chr2_4:9412963-9412982 | Msa0313920:CDS | 35.0% | |
| GTGAAGATGGAACTAAGTAT+TGG | - | chr2_4:9413030-9413049 | Msa0313920:CDS | 35.0% | |
| AGAATTCTTGGGGTAAAGAT+TGG | - | chr2_4:9413060-9413079 | Msa0313920:CDS | 35.0% | |
| GAATTCTTGGGGTAAAGATT+GGG | - | chr2_4:9413061-9413080 | Msa0313920:CDS | 35.0% | |
| AATTCTTGGGGTAAAGATTG+GGG | - | chr2_4:9413062-9413081 | Msa0313920:CDS | 35.0% | |
| AAGGTTACATGAAGTTGTTG+AGG | - | chr2_4:9413090-9413109 | Msa0313920:CDS | 35.0% | |
| AGGTTACATGAAGTTGTTGA+GGG | - | chr2_4:9413091-9413110 | Msa0313920:CDS | 35.0% | |
| AAGCAAAGAGCTTCATCAAA+AGG | + | chr2_4:9413250-9413269 | None:intergenic | 35.0% | |
| TGCTTACTATTGTGGATGTA+TGG | - | chr2_4:9413343-9413362 | Msa0313920:five_prime_UTR | 35.0% | |
| CTGTTTCCATCATGATCTTG+TGG | - | chr2_4:9410826-9410845 | Msa0313920:three_prime_UTR | 40.0% | |
| TTGCTGATGTGCTTCAACAA+CGG | + | chr2_4:9410895-9410914 | None:intergenic | 40.0% | |
| TTGTTGAAGCACATCAGCAA+TGG | - | chr2_4:9410895-9410914 | Msa0313920:three_prime_UTR | 40.0% | |
| CTGAGTTAGAGAAACGCAAA+AGG | - | chr2_4:9410952-9410971 | Msa0313920:exon | 40.0% | |
| CGTAACAAGAGTTACAAGCT+TGG | - | chr2_4:9411020-9411039 | Msa0313920:CDS | 40.0% | |
| TATTGCAACTGACCTCATCT+TGG | + | chr2_4:9411129-9411148 | None:intergenic | 40.0% | |
| TATAGTTACCACAACTGCCT+TGG | + | chr2_4:9411226-9411245 | None:intergenic | 40.0% | |
| TAGTTAGTCATCTTGGACCA+TGG | - | chr2_4:9411277-9411296 | Msa0313920:CDS | 40.0% | |
| ACTGCGATGAACAGAACAAT+GGG | - | chr2_4:9412688-9412707 | Msa0313920:intron | 40.0% | |
| CTGTCTCACTAACAATACCT+TGG | + | chr2_4:9412761-9412780 | None:intergenic | 40.0% | |
| GTCTGTCTACCTTCTTGATA+TGG | + | chr2_4:9412789-9412808 | None:intergenic | 40.0% | |
| ! | AGTTGTTGTTCATCATTGGC+AGG | + | chr2_4:9412870-9412889 | None:intergenic | 40.0% |
| ATGAAGTTGTTGAGGGAAAG+TGG | - | chr2_4:9413098-9413117 | Msa0313920:CDS | 40.0% | |
| ! | TTGTGGATGTATGGACTAAG+TGG | - | chr2_4:9413352-9413371 | Msa0313920:five_prime_UTR | 40.0% |
| ! | TGTGGATGTATGGACTAAGT+GGG | - | chr2_4:9413353-9413372 | Msa0313920:five_prime_UTR | 40.0% |
| TTCAGACAGTGTTCGAGACA+TGG | + | chr2_4:9410868-9410887 | Msa0313910:CDS | 45.0% | |
| GTTAAAGACCAAGGCAGTTG+TGG | - | chr2_4:9411215-9411234 | Msa0313920:CDS | 45.0% | |
| TTAGTCGATGTTGTCAGCCA+TGG | - | chr2_4:9412332-9412351 | Msa0313920:intron | 45.0% | |
| TAGTCGATGTTGTCAGCCAT+GGG | - | chr2_4:9412333-9412352 | Msa0313920:intron | 45.0% | |
| AGCCATGGGTCTCATCTTAT+GGG | - | chr2_4:9412347-9412366 | Msa0313920:intron | 45.0% | |
| GTTGACGTGTGTCTGATACA+AGG | - | chr2_4:9412377-9412396 | Msa0313920:intron | 45.0% | |
| ! | GGTGCTGTGAAAATCAAGAC+TGG | - | chr2_4:9412630-9412649 | Msa0313920:intron | 45.0% |
| GACTGCGATGAACAGAACAA+TGG | - | chr2_4:9412687-9412706 | Msa0313920:intron | 45.0% | |
| GATGAACAGAACAATGGGTG+TGG | - | chr2_4:9412693-9412712 | Msa0313920:intron | 45.0% | |
| GCACAACAACCAGTATCAGT+TGG | - | chr2_4:9412903-9412922 | Msa0313920:CDS | 45.0% | |
| ACTGCAATGCCAACTGATAC+TGG | + | chr2_4:9412915-9412934 | None:intergenic | 45.0% | |
| GTATCAGTTGGCATTGCAGT+CGG | - | chr2_4:9412915-9412934 | Msa0313920:CDS | 45.0% | |
| AACCATGCAGTTACTGCAGT+TGG | - | chr2_4:9412996-9413015 | Msa0313920:CDS | 45.0% | |
| AACCAACTGCAGTAACTGCA+TGG | + | chr2_4:9413001-9413020 | None:intergenic | 45.0% | |
| GCAGTTACTGCAGTTGGTTA+CGG | - | chr2_4:9413002-9413021 | Msa0313920:CDS | 45.0% | |
| GGTTACGGTGTAAGTGAAGA+TGG | - | chr2_4:9413017-9413036 | Msa0313920:CDS | 45.0% | |
| GGTAAAGATTGGGGTGAAGA+AGG | - | chr2_4:9413071-9413090 | Msa0313920:CDS | 45.0% | |
| !!! | TTTAATTGTTTTATTTTTTA+AGG | - | chr2_4:9412204-9412223 | Msa0313920:intron | 5.0% |
| !!! | AAAATAATTTTTTCTTTTTT+TGG | - | chr2_4:9412304-9412323 | Msa0313920:intron | 5.0% |
| !!! | AAATAATTTTTTCTTTTTTT+GGG | - | chr2_4:9412305-9412324 | Msa0313920:intron | 5.0% |
| CAGCCATGGGTCTCATCTTA+TGG | - | chr2_4:9412346-9412365 | Msa0313920:intron | 50.0% | |
| CACCCATAAGATGAGACCCA+TGG | + | chr2_4:9412352-9412371 | None:intergenic | 50.0% | |
| TCAGTCGTAGCTGCTGTAGA+AGG | - | chr2_4:9412609-9412628 | Msa0313920:intron | 50.0% | |
| GAACAGAACAATGGGTGTGG+TGG | - | chr2_4:9412696-9412715 | Msa0313920:intron | 50.0% | |
| ! | TGGGTGTGGTGGAGGTAATA+TGG | - | chr2_4:9412707-9412726 | Msa0313920:intron | 50.0% |
| TTGAGGGAAAGTGGTGAACC+AGG | - | chr2_4:9413107-9413126 | Msa0313920:CDS | 50.0% | |
| CAGAACAATGGGTGTGGTGG+AGG | - | chr2_4:9412699-9412718 | Msa0313920:intron | 55.0% | |
| AGGGAAAGTGGTGAACCAGG+AGG | - | chr2_4:9413110-9413129 | Msa0313920:CDS | 55.0% | |
| GGTGAACCAGGAGGTCAATG+TGG | - | chr2_4:9413119-9413138 | Msa0313920:CDS | 55.0% | |
| GCAATGCCACATTGACCTCC+TGG | + | chr2_4:9413128-9413147 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 9410752 | 9413377 | 9410752 | ID=Msa0313920;Name=Msa0313920 |
| chr2_4 | mRNA | 9410752 | 9413377 | 9410752 | ID=Msa0313920-mRNA-1;Parent=Msa0313920;Name=Msa0313920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=58|1|1|1|1|1|2|202|336 |
| chr2_4 | exon | 9410752 | 9411537 | 9410752 | ID=Msa0313920-mRNA-1:exon:3656;Parent=Msa0313920-mRNA-1 |
| chr2_4 | exon | 9412893 | 9413377 | 9412893 | ID=Msa0313920-mRNA-1:exon:3655;Parent=Msa0313920-mRNA-1 |
| chr2_4 | five_prime_UTR | 9413320 | 9413377 | 9413320 | ID=Msa0313920-mRNA-1:five_prime_utr;Parent=Msa0313920-mRNA-1 |
| chr2_4 | CDS | 9412893 | 9413319 | 9412893 | ID=Msa0313920-mRNA-1:cds;Parent=Msa0313920-mRNA-1 |
| chr2_4 | CDS | 9410954 | 9411537 | 9410954 | ID=Msa0313920-mRNA-1:cds;Parent=Msa0313920-mRNA-1 |
| chr2_4 | three_prime_UTR | 9410752 | 9410953 | 9410752 | ID=Msa0313920-mRNA-1:three_prime_utr;Parent=Msa0313920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
