Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790120 | sp|O82266|SWA1_ARATH | 58.757 | 531 | 207 | 6 | 1 | 529 | 9 | 529 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790120 | G7I2U5 | 97.547 | 530 | 13 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0790120 | 0.807641 | 4.578075e-50 | -8.615850e-47 |
| Msa0638370 | Msa0790120 | 0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0648780 | Msa0790120 | 0.830703 | 2.529910e-55 | -8.615850e-47 |
| Msa0709730 | Msa0790120 | 0.842561 | 2.399012e-58 | -8.615850e-47 |
| Msa0790120 | Msa0869130 | 0.801762 | 7.727618e-49 | -8.615850e-47 |
| Msa0790120 | Msa1027640 | 0.838279 | 3.160503e-57 | -8.615850e-47 |
| Msa0790120 | Msa1066190 | 0.841468 | 4.666431e-58 | -8.615850e-47 |
| Msa0790120 | Msa1153060 | 0.811400 | 7.133947e-51 | -8.615850e-47 |
| Msa0158000 | Msa0790120 | 0.813425 | 2.576067e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790120 | MtrunA17_Chr1g0196201 | 97.547 | 530 | 13 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1075 |
| Msa0790120 | MtrunA17_Chr1g0185501 | 30.994 | 171 | 113 | 5 | 80 | 249 | 22 | 188 | 5.96e-16 | 79.0 |
| Msa0790120 | MtrunA17_Chr4g0070791 | 30.435 | 184 | 112 | 4 | 58 | 228 | 118 | 298 | 5.30e-15 | 76.3 |
| Msa0790120 | MtrunA17_Chr2g0281451 | 23.830 | 235 | 163 | 7 | 98 | 330 | 29 | 249 | 1.22e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790120 | AT2G47990.1 | 58.757 | 531 | 207 | 6 | 1 | 529 | 9 | 529 | 0.0 | 604 |
| Msa0790120 | AT4G29830.1 | 32.653 | 147 | 96 | 2 | 88 | 234 | 161 | 304 | 8.83e-14 | 72.8 |
| Msa0790120 | AT5G50230.1 | 27.027 | 185 | 117 | 6 | 138 | 319 | 277 | 446 | 1.61e-12 | 70.1 |
| Msa0790120 | AT3G49660.1 | 28.415 | 183 | 120 | 7 | 77 | 253 | 16 | 193 | 2.04e-12 | 68.9 |
| Msa0790120 | AT4G02730.1 | 26.061 | 165 | 116 | 6 | 80 | 242 | 38 | 198 | 6.38e-12 | 67.4 |
| Msa0790120 | AT5G13480.2 | 24.051 | 316 | 206 | 12 | 46 | 356 | 108 | 394 | 4.43e-11 | 65.9 |
| Msa0790120 | AT5G13480.4 | 24.051 | 316 | 206 | 12 | 46 | 356 | 85 | 371 | 5.43e-11 | 65.9 |
| Msa0790120 | AT3G15980.5 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 5.87e-11 | 65.9 |
| Msa0790120 | AT5G13480.3 | 24.051 | 316 | 206 | 12 | 46 | 356 | 85 | 371 | 6.05e-11 | 65.5 |
| Msa0790120 | AT3G15980.7 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.30e-11 | 65.9 |
| Msa0790120 | AT3G15980.3 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.48e-11 | 65.9 |
| Msa0790120 | AT3G15980.6 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.48e-11 | 65.9 |
| Msa0790120 | AT3G15980.2 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.48e-11 | 65.9 |
| Msa0790120 | AT3G15980.4 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.48e-11 | 65.9 |
| Msa0790120 | AT3G15980.1 | 24.904 | 261 | 180 | 10 | 75 | 331 | 5 | 253 | 6.51e-11 | 65.9 |
| Msa0790120 | AT5G13480.1 | 24.051 | 316 | 206 | 12 | 46 | 356 | 97 | 383 | 7.86e-11 | 65.1 |
Find 173 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGTTTGGGATTGTGTTCT+TGG | 0.157342 | 5_3:-763970 | None:intergenic |
| GATAAGTTGCATTTAGTTTC+TGG | 0.212466 | 5_3:+764327 | Msa0790120:CDS |
| GCAGTCAACTTCACCTTCTT+TGG | 0.223900 | 5_3:-765089 | None:intergenic |
| CAAGTATTCTAGTTTGTTAA+TGG | 0.227969 | 5_3:+765307 | Msa0790120:CDS |
| GAAGGGATGGAGAATTGTTT+AGG | 0.237807 | 5_3:-764033 | None:intergenic |
| TTTGAAGGAAGACCAGTATT+TGG | 0.239917 | 5_3:-763998 | None:intergenic |
| TTGTTAAGGTTTGGGATGTT+AGG | 0.254425 | 5_3:+764493 | Msa0790120:CDS |
| GGAGAAGCTGGAACTGCTTT+TGG | 0.259476 | 5_3:+765256 | Msa0790120:CDS |
| GCGAAGGAATAGGGTGGATT+TGG | 0.263005 | 5_3:-764069 | None:intergenic |
| GTTAATGGGATTGGCTAATA+AGG | 0.271721 | 5_3:+765322 | Msa0790120:CDS |
| GGGAGGATCGGGAAGGATTC+GGG | 0.272953 | 5_3:+764708 | Msa0790120:CDS |
| CTAGTTCGGTTTGGAGAATT+AGG | 0.279451 | 5_3:+764961 | Msa0790120:CDS |
| GTGGGAATGCGGTCAAGATT+TGG | 0.293697 | 5_3:+764613 | Msa0790120:CDS |
| GTTTGGGATGTTAGGGTTAG+AGG | 0.297753 | 5_3:+764501 | Msa0790120:CDS |
| CGAAGGAATAGGGTGGATTT+GGG | 0.304966 | 5_3:-764068 | None:intergenic |
| AAGGGATGGAGAATTGTTTA+GGG | 0.316527 | 5_3:-764032 | None:intergenic |
| GTATTTGGATTCAGAGGTTT+GGG | 0.323308 | 5_3:-763983 | None:intergenic |
| AAATGAGGGCTGATGATATT+AGG | 0.325566 | 5_3:+765351 | Msa0790120:CDS |
| CATTAACAAACTAGAATACT+TGG | 0.351333 | 5_3:-765306 | None:intergenic |
| ATTAGCGGCGGCGAAGGAAT+AGG | 0.358527 | 5_3:-764079 | None:intergenic |
| GATCAAACAATCGTCCTGTT+AGG | 0.358606 | 5_3:+764283 | Msa0790120:CDS |
| TGGGAGGATCGGGAAGGATT+CGG | 0.360564 | 5_3:+764707 | Msa0790120:CDS |
| TCTCCTTTGTTGAGAATTGC+TGG | 0.363442 | 5_3:+765473 | Msa0790120:CDS |
| AAGGTGGATGAGAAGGAAGT+TGG | 0.363701 | 5_3:+764927 | Msa0790120:CDS |
| TGGGAATGCGGTCAAGATTT+GGG | 0.370097 | 5_3:+764614 | Msa0790120:CDS |
| AAGTATTCTAGTTTGTTAAT+GGG | 0.370766 | 5_3:+765308 | Msa0790120:CDS |
| CACATCTAACATAATCCTTA+TGG | 0.370873 | 5_3:-764416 | None:intergenic |
| AGTATTTGGATTCAGAGGTT+TGG | 0.376412 | 5_3:-763984 | None:intergenic |
| TGATTTAGATTTGGAGAAGC+TGG | 0.378998 | 5_3:+765244 | Msa0790120:CDS |
| GTTGTTTATTTGCCGGGTGG+TGG | 0.385067 | 5_3:+764573 | Msa0790120:CDS |
| TTCTAGTTTGTTAATGGGAT+TGG | 0.396417 | 5_3:+765313 | Msa0790120:CDS |
| AGAATTGTTTAGGGATTTGT+TGG | 0.400534 | 5_3:-764023 | None:intergenic |
| GGAGGATGTTGTTTATTTGC+CGG | 0.402345 | 5_3:+764566 | Msa0790120:CDS |
| TGTTAAGGTTTGGGATGTTA+GGG | 0.406978 | 5_3:+764494 | Msa0790120:CDS |
| TTGGGATTGTGTTCTTGGTT+TGG | 0.407303 | 5_3:-763965 | None:intergenic |
| ATTCGCCGGATTGTTCTACT+AGG | 0.408446 | 5_3:+764856 | Msa0790120:CDS |
| ACCATCTGAGGGTGATTACT+TGG | 0.408850 | 5_3:+765058 | Msa0790120:CDS |
| ACAAAACAATCAGAACTAAC+CGG | 0.413789 | 5_3:-764450 | None:intergenic |
| AGGTGGATGAGAAGGAAGTT+GGG | 0.415544 | 5_3:+764928 | Msa0790120:CDS |
| GATTGTTCTACTAGGGTGAT+TGG | 0.420300 | 5_3:+764864 | Msa0790120:CDS |
| AGATTTGTGTTGGGAGGATC+GGG | 0.425705 | 5_3:+764697 | Msa0790120:CDS |
| TGATGCCGTTGTTAGGTATT+GGG | 0.427423 | 5_3:+764356 | Msa0790120:CDS |
| GTGTGTTTCTGATTTAGATT+TGG | 0.429034 | 5_3:+765235 | Msa0790120:CDS |
| TAGGATTATGAGTGTTGGTT+TGG | 0.431430 | 5_3:+764749 | Msa0790120:CDS |
| AAGATTTGGGATTTGATTGG+TGG | 0.437801 | 5_3:+764627 | Msa0790120:CDS |
| GGATAATGAACAAACCTAAC+AGG | 0.439146 | 5_3:-764297 | None:intergenic |
| GGTTGCTGTGATGGAGGAAT+TGG | 0.439980 | 5_3:+765190 | Msa0790120:CDS |
| TGGGGTGAGTGAGGCTAGTT+CGG | 0.440336 | 5_3:+764947 | Msa0790120:CDS |
| TTAGCGGCGGCGAAGGAATA+GGG | 0.442136 | 5_3:-764078 | None:intergenic |
| AGGAGGAGATGGTGGCGGTT+TGG | 0.451413 | 5_3:-764140 | None:intergenic |
| GGTGGGATGATTGCAACAGC+TGG | 0.452218 | 5_3:+764591 | Msa0790120:CDS |
| ATGATGCCGTTGTTAGGTAT+TGG | 0.452405 | 5_3:+764355 | Msa0790120:CDS |
| CATGGTGTTTCGTGGCCATA+AGG | 0.457919 | 5_3:+764401 | Msa0790120:CDS |
| GGGATTTGATTGGTGGTGGG+AGG | 0.459347 | 5_3:+764634 | Msa0790120:CDS |
| ATTTGGGATTTGATTGGTGG+TGG | 0.460343 | 5_3:+764630 | Msa0790120:CDS |
| AAGATTTGTGTTGGGAGGAT+CGG | 0.463451 | 5_3:+764696 | Msa0790120:CDS |
| CTAATAAGGTTATTGAAATG+AGG | 0.469043 | 5_3:+765336 | Msa0790120:CDS |
| GTCAAGATTTGGGATTTGAT+TGG | 0.475359 | 5_3:+764624 | Msa0790120:CDS |
| CTCGCCGCTTCTGACCTCTC+CGG | 0.476338 | 5_3:+764210 | Msa0790120:CDS |
| ATAGGGTGGATTTGGGGAGA+AGG | 0.477167 | 5_3:-764061 | None:intergenic |
| GAATTGTTTAGGGATTTGTT+GGG | 0.479821 | 5_3:-764022 | None:intergenic |
| TGAGTGAGGCTAGTTCGGTT+TGG | 0.481655 | 5_3:+764952 | Msa0790120:CDS |
| AGGGCATGTGGTTGCTGTGA+TGG | 0.482493 | 5_3:+765181 | Msa0790120:CDS |
| AGCTGAATTAGCGGCGGCGA+AGG | 0.485317 | 5_3:-764085 | None:intergenic |
| TGATCTAAGACGACGGAGAC+GGG | 0.486170 | 5_3:-764265 | None:intergenic |
| TCGCCGCTTCTGACCTCTCC+GGG | 0.487189 | 5_3:+764211 | Msa0790120:CDS |
| TGGATTTGGGGAGAAGGTGA+TGG | 0.489356 | 5_3:-764055 | None:intergenic |
| CTTGGTTATGAAGCCAAAGA+AGG | 0.489834 | 5_3:+765076 | Msa0790120:CDS |
| GAAGGTAAAGGTGGATGAGA+AGG | 0.491134 | 5_3:+764920 | Msa0790120:CDS |
| GTGTTGGAAGGTAAGAATCC+AGG | 0.495016 | 5_3:+765161 | Msa0790120:CDS |
| AAGAGTTTGAGAGCTGAAGA+TGG | 0.496356 | 5_3:-764115 | None:intergenic |
| AAACCTCTGAATCCAAATAC+TGG | 0.498293 | 5_3:+763986 | Msa0790120:CDS |
| CGGTGACGAAGATTTGTGTT+GGG | 0.498679 | 5_3:+764688 | Msa0790120:CDS |
| CAGTATAGGATTATGAGTGT+TGG | 0.498953 | 5_3:+764744 | Msa0790120:CDS |
| GTTTGATTACGGTAATATGA+AGG | 0.499792 | 5_3:+764788 | Msa0790120:CDS |
| CAGTCGTTGCAAGAGATACA+AGG | 0.510806 | 5_3:+765443 | Msa0790120:CDS |
| GGAGGAGACGGTGTCGGAGA+AGG | 0.512976 | 5_3:-764160 | None:intergenic |
| TTTGGGGAGAAGGTGATGGA+AGG | 0.518211 | 5_3:-764051 | None:intergenic |
| TTGTTTATTTGCCGGGTGGT+GGG | 0.518288 | 5_3:+764574 | Msa0790120:CDS |
| ATTATGAGTGTTGGTTTGGA+TGG | 0.518342 | 5_3:+764753 | Msa0790120:CDS |
| GGAGGATCGGGAAGGATTCG+GGG | 0.520732 | 5_3:+764709 | Msa0790120:CDS |
| CAAAACAATCAGAACTAACC+GGG | 0.520896 | 5_3:-764449 | None:intergenic |
| GTAGTGATGATGCCGTTGTT+AGG | 0.523290 | 5_3:+764349 | Msa0790120:CDS |
| CGAGGAGACGAGCATCGTTA+CGG | 0.525818 | 5_3:-764191 | None:intergenic |
| TTTGAGAGCTGAAGATGGAG+AGG | 0.526433 | 5_3:-764110 | None:intergenic |
| ATCACAGCAACCACATGCCC+TGG | 0.526670 | 5_3:-765179 | None:intergenic |
| GGAATGAGTCGGATCAGTAT+AGG | 0.527668 | 5_3:+764730 | Msa0790120:CDS |
| AGGGTGATTGGAACTTCGAA+TGG | 0.528923 | 5_3:+764876 | Msa0790120:CDS |
| GAAGGAAGTTGGGGTGAGTG+AGG | 0.529605 | 5_3:+764938 | Msa0790120:CDS |
| TTGATCTAAGACGACGGAGA+CGG | 0.530178 | 5_3:-764266 | None:intergenic |
| TTGGAGAATTAGGCCGGTGG+AGG | 0.532273 | 5_3:+764971 | Msa0790120:CDS |
| GCACTGTCGAGACAGAGATT+CGG | 0.536660 | 5_3:+765414 | Msa0790120:CDS |
| GAGGATGTTGTTTATTTGCC+GGG | 0.537889 | 5_3:+764567 | Msa0790120:CDS |
| TTTGGGATTTGATTGGTGGT+GGG | 0.542819 | 5_3:+764631 | Msa0790120:CDS |
| ACTCCGGTCATGGTGTTTCG+TGG | 0.543833 | 5_3:+764393 | Msa0790120:CDS |
| TTCGGTTTGGAGAATTAGGC+CGG | 0.544980 | 5_3:+764965 | Msa0790120:CDS |
| AGGTGAGACCAACTCGGTGA+TGG | 0.549474 | 5_3:+764521 | Msa0790120:CDS |
| GGAGACGGTGTCGGAGAAGG+AGG | 0.550158 | 5_3:-764157 | None:intergenic |
| CCAACAGACAAAAGCGGCGC+AGG | 0.551615 | 5_3:-764831 | None:intergenic |
| AGACCAGTATTTGGATTCAG+AGG | 0.552256 | 5_3:-763989 | None:intergenic |
| TTTGTCTGTTGGGTATTCGC+CGG | 0.553778 | 5_3:+764842 | Msa0790120:CDS |
| CGTCTTATTATGACTCTCCA+TGG | 0.554512 | 5_3:-764667 | None:intergenic |
| TTCTTCTCAGTATCCTCCAC+CGG | 0.556705 | 5_3:-764984 | None:intergenic |
| GGAGAAGGTGATGGAAGGGA+TGG | 0.558858 | 5_3:-764046 | None:intergenic |
| TAATAAGGTTATTGAAATGA+GGG | 0.559117 | 5_3:+765337 | Msa0790120:CDS |
| TACTGAGGAAACTCCGGTCA+TGG | 0.559282 | 5_3:+764383 | Msa0790120:CDS |
| TGGCCACGAAACACCATGAC+CGG | 0.559409 | 5_3:-764396 | None:intergenic |
| ATTAAAATCCATCACCGAGT+TGG | 0.559727 | 5_3:-764529 | None:intergenic |
| TTGAGAGCTGAAGATGGAGA+GGG | 0.559770 | 5_3:-764109 | None:intergenic |
| TGATGGAGGAATTGGTGTCT+AGG | 0.560038 | 5_3:+765198 | Msa0790120:CDS |
| ATCGAAGATTTGAATTAACC+CGG | 0.570756 | 5_3:-764229 | None:intergenic |
| TTGGGGAGAAGGTGATGGAA+GGG | 0.571747 | 5_3:-764050 | None:intergenic |
| GGGTGATTGGAACTTCGAAT+GGG | 0.571974 | 5_3:+764877 | Msa0790120:CDS |
| CTTCCAGCAATTCTCAACAA+AGG | 0.572053 | 5_3:-765476 | None:intergenic |
| GGTGGAGGATACTGAGAAGA+AGG | 0.572161 | 5_3:+764986 | Msa0790120:CDS |
| ACGGTGACGAAGATTTGTGT+TGG | 0.574806 | 5_3:+764687 | Msa0790120:CDS |
| GGGATGATTGCAACAGCTGG+TGG | 0.577309 | 5_3:+764594 | Msa0790120:CDS |
| TGGGAGGCTTGTGTATTCCA+TGG | 0.578149 | 5_3:+764650 | Msa0790120:CDS |
| GTCGGAGAAGGAGGAGATGG+TGG | 0.579404 | 5_3:-764148 | None:intergenic |
| GGAGAGGGAAGCTGAATTAG+CGG | 0.586229 | 5_3:-764094 | None:intergenic |
| TAGATGTGGTGATTCGTCCC+CGG | 0.586555 | 5_3:+764431 | Msa0790120:CDS |
| GAATAAGTTTAGGCATGGTG+AGG | 0.586991 | 5_3:+765127 | Msa0790120:CDS |
| GGTGTCGGAGAAGGAGGAGA+TGG | 0.587195 | 5_3:-764151 | None:intergenic |
| GTTGCAATCATCCCACCACC+CGG | 0.587460 | 5_3:-764585 | None:intergenic |
| TTGTGTTGGGAGGATCGGGA+AGG | 0.588502 | 5_3:+764701 | Msa0790120:CDS |
| GAAGGATTCGGGGAATGAGT+CGG | 0.589250 | 5_3:+764719 | Msa0790120:CDS |
| GGTGGATGAGAAGGAAGTTG+GGG | 0.590324 | 5_3:+764929 | Msa0790120:CDS |
| TAGGTATTGGGATGTTACTG+AGG | 0.593479 | 5_3:+764368 | Msa0790120:CDS |
| GCTCTTGTGTGCGTGTTGGA+AGG | 0.593734 | 5_3:+765149 | Msa0790120:CDS |
| ATCACCCTAGTAGAACAATC+CGG | 0.594271 | 5_3:-764861 | None:intergenic |
| TGTTGGAAGGTAAGAATCCA+GGG | 0.600042 | 5_3:+765162 | Msa0790120:CDS |
| TAATCATGGTTGTCCTGTGG+AGG | 0.600616 | 5_3:+764548 | Msa0790120:CDS |
| TTCGCCGGATTGTTCTACTA+GGG | 0.603643 | 5_3:+764857 | Msa0790120:CDS |
| TGAGGCTCTTGTGTGCGTGT+TGG | 0.603731 | 5_3:+765145 | Msa0790120:CDS |
| GAATACCCAACAGACAAAAG+CGG | 0.604064 | 5_3:-764837 | None:intergenic |
| TGCTGCAAAGAGGAAGGTAA+AGG | 0.605968 | 5_3:+764908 | Msa0790120:CDS |
| AATTTATGCTGCAAAGAGGA+AGG | 0.608646 | 5_3:+764902 | Msa0790120:CDS |
| ATTAACAAACTAGAATACTT+GGG | 0.616436 | 5_3:-765305 | None:intergenic |
| AAATAAACAACATCCTCCAC+AGG | 0.617238 | 5_3:-764561 | None:intergenic |
| CGGAGAGGTCAGAAGCGGCG+AGG | 0.618345 | 5_3:-764209 | None:intergenic |
| ACCAAGTAATCACCCTCAGA+TGG | 0.618575 | 5_3:-765059 | None:intergenic |
| GGATGATTGCAACAGCTGGT+GGG | 0.618810 | 5_3:+764595 | Msa0790120:CDS |
| AGGTAAGAATCCAGGGCATG+TGG | 0.620054 | 5_3:+765169 | Msa0790120:CDS |
| AGAGACGGAGGAGACGGTGT+CGG | 0.621983 | 5_3:-764166 | None:intergenic |
| GGAGAAGGAGGAGATGGTGG+CGG | 0.624254 | 5_3:-764145 | None:intergenic |
| GGATGTTACTGAGGAAACTC+CGG | 0.626392 | 5_3:+764377 | Msa0790120:CDS |
| ACGGAAAGAGACGGAGGAGA+CGG | 0.629393 | 5_3:-764172 | None:intergenic |
| CATGGAGAGTCATAATAAGA+CGG | 0.634586 | 5_3:+764668 | Msa0790120:CDS |
| AGATTTGAATTAACCCGGAG+AGG | 0.635639 | 5_3:-764224 | None:intergenic |
| CAAGGTGAGAAACCATCTGA+GGG | 0.636287 | 5_3:+765047 | Msa0790120:CDS |
| TGACGAAGATTTGTGTTGGG+AGG | 0.639147 | 5_3:+764691 | Msa0790120:CDS |
| GCATGTGGTTGCTGTGATGG+AGG | 0.640066 | 5_3:+765184 | Msa0790120:CDS |
| GCAAGGTGAGAAACCATCTG+AGG | 0.641081 | 5_3:+765046 | Msa0790120:CDS |
| GGATAATTTATGCTGCAAAG+AGG | 0.645362 | 5_3:+764898 | Msa0790120:CDS |
| TGCAACAGCTGGTGGGAATG+CGG | 0.649987 | 5_3:+764602 | Msa0790120:CDS |
| GGTTAGAGGTGAGACCAACT+CGG | 0.655570 | 5_3:+764515 | Msa0790120:CDS |
| TGAAGGTTACTTATTCGATG+AGG | 0.658542 | 5_3:+764805 | Msa0790120:CDS |
| GATTGTTTGATCTAAGACGA+CGG | 0.662044 | 5_3:-764272 | None:intergenic |
| GGTTTGGAGAATTAGGCCGG+TGG | 0.670090 | 5_3:+764968 | Msa0790120:CDS |
| AAATGCAACTTATCATGACG+CGG | 0.673001 | 5_3:-764318 | None:intergenic |
| AGCATCGTTACGGAAAGAGA+CGG | 0.674964 | 5_3:-764181 | None:intergenic |
| GAAGGAATAGGGTGGATTTG+GGG | 0.675040 | 5_3:-764067 | None:intergenic |
| GATGTTGTTTATTTGCCGGG+TGG | 0.677452 | 5_3:+764570 | Msa0790120:CDS |
| GAGGGAAGCTGAATTAGCGG+CGG | 0.678014 | 5_3:-764091 | None:intergenic |
| CATAAGGATTATGTTAGATG+TGG | 0.678530 | 5_3:+764417 | Msa0790120:CDS |
| GCGGCGGCGAAGGAATAGGG+TGG | 0.680220 | 5_3:-764075 | None:intergenic |
| TGCAAAGAGGAAGGTAAAGG+TGG | 0.681900 | 5_3:+764911 | Msa0790120:CDS |
| AGTCGTTGCAAGAGATACAA+GGG | 0.683300 | 5_3:+765444 | Msa0790120:CDS |
| ATCGTTACGGAAAGAGACGG+AGG | 0.689504 | 5_3:-764178 | None:intergenic |
| TAACCCGGAGAGGTCAGAAG+CGG | 0.691165 | 5_3:-764214 | None:intergenic |
| AACATCCCAATACCTAACAA+CGG | 0.692068 | 5_3:-764361 | None:intergenic |
| TGTCTAGGAAGAAGTTGTTG+AGG | 0.703968 | 5_3:+765213 | Msa0790120:CDS |
| AAAACAATCAGAACTAACCG+GGG | 0.725083 | 5_3:-764448 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAGGTGTTTGATTA+CGG | + | chr5_3:764777-764796 | Msa0790120:CDS | 20.0% |
| !!! | TTTTGAAAACTACTAACTTT+AGG | + | chr5_3:765009-765028 | Msa0790120:CDS | 20.0% |
| !!! | ATAAGCTTTTGAATAAGTTT+AGG | + | chr5_3:765117-765136 | Msa0790120:CDS | 20.0% |
| !! | ATTAACAAACTAGAATACTT+GGG | - | chr5_3:765308-765327 | None:intergenic | 20.0% |
| !!! | AAGTATTCTAGTTTGTTAAT+GGG | + | chr5_3:765308-765327 | Msa0790120:CDS | 20.0% |
| !! | TAATAAGGTTATTGAAATGA+GGG | + | chr5_3:765337-765356 | Msa0790120:CDS | 20.0% |
| !!! | TATTTTAAGGTGTTTGATTA+CGG | + | chr5_3:764777-764796 | Msa0790120:CDS | 20.0% |
| !!! | TTTTGAAAACTACTAACTTT+AGG | + | chr5_3:765009-765028 | Msa0790120:CDS | 20.0% |
| !!! | ATAAGCTTTTGAATAAGTTT+AGG | + | chr5_3:765117-765136 | Msa0790120:CDS | 20.0% |
| !! | ATTAACAAACTAGAATACTT+GGG | - | chr5_3:765308-765327 | None:intergenic | 20.0% |
| !!! | AAGTATTCTAGTTTGTTAAT+GGG | + | chr5_3:765308-765327 | Msa0790120:CDS | 20.0% |
| !! | TAATAAGGTTATTGAAATGA+GGG | + | chr5_3:765337-765356 | Msa0790120:CDS | 20.0% |
| !!! | TTTTGAGTTTAGGTTTAACT+GGG | - | chr5_3:763945-763964 | None:intergenic | 25.0% |
| !! | CTCTTATGATCATTTTGTTA+AGG | + | chr5_3:764479-764498 | Msa0790120:CDS | 25.0% |
| !! | ATGATCATTTTGTTAAGGTT+TGG | + | chr5_3:764484-764503 | Msa0790120:CDS | 25.0% |
| !! | TGATCATTTTGTTAAGGTTT+GGG | + | chr5_3:764485-764504 | Msa0790120:CDS | 25.0% |
| !! | AACTTTAGGTATTTTCAAAG+AGG | + | chr5_3:765023-765042 | Msa0790120:CDS | 25.0% |
| !! | ACTTTAGGTATTTTCAAAGA+GGG | + | chr5_3:765024-765043 | Msa0790120:CDS | 25.0% |
| ! | CATTAACAAACTAGAATACT+TGG | - | chr5_3:765309-765328 | None:intergenic | 25.0% |
| !!! | CAAGTATTCTAGTTTGTTAA+TGG | + | chr5_3:765307-765326 | Msa0790120:CDS | 25.0% |
| ! | CTAATAAGGTTATTGAAATG+AGG | + | chr5_3:765336-765355 | Msa0790120:CDS | 25.0% |
| !!! | TTTTGAGTTTAGGTTTAACT+GGG | - | chr5_3:763945-763964 | None:intergenic | 25.0% |
| !! | CTCTTATGATCATTTTGTTA+AGG | + | chr5_3:764479-764498 | Msa0790120:CDS | 25.0% |
| !! | ATGATCATTTTGTTAAGGTT+TGG | + | chr5_3:764484-764503 | Msa0790120:CDS | 25.0% |
| !! | TGATCATTTTGTTAAGGTTT+GGG | + | chr5_3:764485-764504 | Msa0790120:CDS | 25.0% |
| !! | AACTTTAGGTATTTTCAAAG+AGG | + | chr5_3:765023-765042 | Msa0790120:CDS | 25.0% |
| !! | ACTTTAGGTATTTTCAAAGA+GGG | + | chr5_3:765024-765043 | Msa0790120:CDS | 25.0% |
| ! | CATTAACAAACTAGAATACT+TGG | - | chr5_3:765309-765328 | None:intergenic | 25.0% |
| !!! | CAAGTATTCTAGTTTGTTAA+TGG | + | chr5_3:765307-765326 | Msa0790120:CDS | 25.0% |
| ! | CTAATAAGGTTATTGAAATG+AGG | + | chr5_3:765336-765355 | Msa0790120:CDS | 25.0% |
| !!! | GTTTTGAGTTTAGGTTTAAC+TGG | - | chr5_3:763946-763965 | None:intergenic | 30.0% |
| ! | GAATTGTTTAGGGATTTGTT+GGG | - | chr5_3:764025-764044 | None:intergenic | 30.0% |
| AGAATTGTTTAGGGATTTGT+TGG | - | chr5_3:764026-764045 | None:intergenic | 30.0% | |
| ATCGAAGATTTGAATTAACC+CGG | - | chr5_3:764232-764251 | None:intergenic | 30.0% | |
| ! | GATAAGTTGCATTTAGTTTC+TGG | + | chr5_3:764327-764346 | Msa0790120:CDS | 30.0% |
| CACATCTAACATAATCCTTA+TGG | - | chr5_3:764419-764438 | None:intergenic | 30.0% | |
| CATAAGGATTATGTTAGATG+TGG | + | chr5_3:764417-764436 | Msa0790120:CDS | 30.0% | |
| ACAAAACAATCAGAACTAAC+CGG | - | chr5_3:764453-764472 | None:intergenic | 30.0% | |
| !! | AGTTCTGATTGTTTTGTTAC+TGG | + | chr5_3:764456-764475 | Msa0790120:CDS | 30.0% |
| !! | TGGTTTGGATGGTTATTTTA+AGG | + | chr5_3:764764-764783 | Msa0790120:CDS | 30.0% |
| GTTTGATTACGGTAATATGA+AGG | + | chr5_3:764788-764807 | Msa0790120:CDS | 30.0% | |
| ! | CTTTTGAATAAGTTTAGGCA+TGG | + | chr5_3:765122-765141 | Msa0790120:CDS | 30.0% |
| ! | GTGTGTTTCTGATTTAGATT+TGG | + | chr5_3:765235-765254 | Msa0790120:CDS | 30.0% |
| !! | TTCTAGTTTGTTAATGGGAT+TGG | + | chr5_3:765313-765332 | Msa0790120:CDS | 30.0% |
| !!! | GTTTTGAGTTTAGGTTTAAC+TGG | - | chr5_3:763946-763965 | None:intergenic | 30.0% |
| ! | GAATTGTTTAGGGATTTGTT+GGG | - | chr5_3:764025-764044 | None:intergenic | 30.0% |
| AGAATTGTTTAGGGATTTGT+TGG | - | chr5_3:764026-764045 | None:intergenic | 30.0% | |
| ATCGAAGATTTGAATTAACC+CGG | - | chr5_3:764232-764251 | None:intergenic | 30.0% | |
| ! | GATAAGTTGCATTTAGTTTC+TGG | + | chr5_3:764327-764346 | Msa0790120:CDS | 30.0% |
| CACATCTAACATAATCCTTA+TGG | - | chr5_3:764419-764438 | None:intergenic | 30.0% | |
| CATAAGGATTATGTTAGATG+TGG | + | chr5_3:764417-764436 | Msa0790120:CDS | 30.0% | |
| ACAAAACAATCAGAACTAAC+CGG | - | chr5_3:764453-764472 | None:intergenic | 30.0% | |
| !! | AGTTCTGATTGTTTTGTTAC+TGG | + | chr5_3:764456-764475 | Msa0790120:CDS | 30.0% |
| !! | TGGTTTGGATGGTTATTTTA+AGG | + | chr5_3:764764-764783 | Msa0790120:CDS | 30.0% |
| GTTTGATTACGGTAATATGA+AGG | + | chr5_3:764788-764807 | Msa0790120:CDS | 30.0% | |
| ! | CTTTTGAATAAGTTTAGGCA+TGG | + | chr5_3:765122-765141 | Msa0790120:CDS | 30.0% |
| ! | GTGTGTTTCTGATTTAGATT+TGG | + | chr5_3:765235-765254 | Msa0790120:CDS | 30.0% |
| !! | TTCTAGTTTGTTAATGGGAT+TGG | + | chr5_3:765313-765332 | Msa0790120:CDS | 30.0% |
| !!! | CTTGGTTTGGTTTTGAGTTT+AGG | - | chr5_3:763955-763974 | None:intergenic | 35.0% |
| GTATTTGGATTCAGAGGTTT+GGG | - | chr5_3:763986-764005 | None:intergenic | 35.0% | |
| AGTATTTGGATTCAGAGGTT+TGG | - | chr5_3:763987-764006 | None:intergenic | 35.0% | |
| AAACCTCTGAATCCAAATAC+TGG | + | chr5_3:763986-764005 | Msa0790120:CDS | 35.0% | |
| TTTGAAGGAAGACCAGTATT+TGG | - | chr5_3:764001-764020 | None:intergenic | 35.0% | |
| AAGGGATGGAGAATTGTTTA+GGG | - | chr5_3:764035-764054 | None:intergenic | 35.0% | |
| ! | GATTGTTTGATCTAAGACGA+CGG | - | chr5_3:764275-764294 | None:intergenic | 35.0% |
| GGATAATGAACAAACCTAAC+AGG | - | chr5_3:764300-764319 | None:intergenic | 35.0% | |
| AAATGCAACTTATCATGACG+CGG | - | chr5_3:764321-764340 | None:intergenic | 35.0% | |
| AACATCCCAATACCTAACAA+CGG | - | chr5_3:764364-764383 | None:intergenic | 35.0% | |
| AAAACAATCAGAACTAACCG+GGG | - | chr5_3:764451-764470 | None:intergenic | 35.0% | |
| CAAAACAATCAGAACTAACC+GGG | - | chr5_3:764452-764471 | None:intergenic | 35.0% | |
| ! | TTGTTAAGGTTTGGGATGTT+AGG | + | chr5_3:764493-764512 | Msa0790120:CDS | 35.0% |
| ! | TGTTAAGGTTTGGGATGTTA+GGG | + | chr5_3:764494-764513 | Msa0790120:CDS | 35.0% |
| ATTAAAATCCATCACCGAGT+TGG | - | chr5_3:764532-764551 | None:intergenic | 35.0% | |
| !!! | TCGGTGATGGATTTTAATCA+TGG | + | chr5_3:764534-764553 | Msa0790120:CDS | 35.0% |
| ! | TTTTAATCATGGTTGTCCTG+TGG | + | chr5_3:764545-764564 | Msa0790120:CDS | 35.0% |
| AAATAAACAACATCCTCCAC+AGG | - | chr5_3:764564-764583 | None:intergenic | 35.0% | |
| ! | GTCAAGATTTGGGATTTGAT+TGG | + | chr5_3:764624-764643 | Msa0790120:CDS | 35.0% |
| ! | AAGATTTGGGATTTGATTGG+TGG | + | chr5_3:764627-764646 | Msa0790120:CDS | 35.0% |
| CATGGAGAGTCATAATAAGA+CGG | + | chr5_3:764668-764687 | Msa0790120:CDS | 35.0% | |
| CAGTATAGGATTATGAGTGT+TGG | + | chr5_3:764744-764763 | Msa0790120:CDS | 35.0% | |
| !! | TAGGATTATGAGTGTTGGTT+TGG | + | chr5_3:764749-764768 | Msa0790120:CDS | 35.0% |
| !! | ATTATGAGTGTTGGTTTGGA+TGG | + | chr5_3:764753-764772 | Msa0790120:CDS | 35.0% |
| TGAAGGTTACTTATTCGATG+AGG | + | chr5_3:764805-764824 | Msa0790120:CDS | 35.0% | |
| GGATAATTTATGCTGCAAAG+AGG | + | chr5_3:764898-764917 | Msa0790120:CDS | 35.0% | |
| AATTTATGCTGCAAAGAGGA+AGG | + | chr5_3:764902-764921 | Msa0790120:CDS | 35.0% | |
| TGATTTAGATTTGGAGAAGC+TGG | + | chr5_3:765244-765263 | Msa0790120:CDS | 35.0% | |
| !! | GTTAATGGGATTGGCTAATA+AGG | + | chr5_3:765322-765341 | Msa0790120:CDS | 35.0% |
| AAATGAGGGCTGATGATATT+AGG | + | chr5_3:765351-765370 | Msa0790120:CDS | 35.0% | |
| !!! | CTTGGTTTGGTTTTGAGTTT+AGG | - | chr5_3:763955-763974 | None:intergenic | 35.0% |
| GTATTTGGATTCAGAGGTTT+GGG | - | chr5_3:763986-764005 | None:intergenic | 35.0% | |
| AGTATTTGGATTCAGAGGTT+TGG | - | chr5_3:763987-764006 | None:intergenic | 35.0% | |
| AAACCTCTGAATCCAAATAC+TGG | + | chr5_3:763986-764005 | Msa0790120:CDS | 35.0% | |
| TTTGAAGGAAGACCAGTATT+TGG | - | chr5_3:764001-764020 | None:intergenic | 35.0% | |
| AAGGGATGGAGAATTGTTTA+GGG | - | chr5_3:764035-764054 | None:intergenic | 35.0% | |
| ! | GATTGTTTGATCTAAGACGA+CGG | - | chr5_3:764275-764294 | None:intergenic | 35.0% |
| GGATAATGAACAAACCTAAC+AGG | - | chr5_3:764300-764319 | None:intergenic | 35.0% | |
| AAATGCAACTTATCATGACG+CGG | - | chr5_3:764321-764340 | None:intergenic | 35.0% | |
| AACATCCCAATACCTAACAA+CGG | - | chr5_3:764364-764383 | None:intergenic | 35.0% | |
| AAAACAATCAGAACTAACCG+GGG | - | chr5_3:764451-764470 | None:intergenic | 35.0% | |
| CAAAACAATCAGAACTAACC+GGG | - | chr5_3:764452-764471 | None:intergenic | 35.0% | |
| ! | TTGTTAAGGTTTGGGATGTT+AGG | + | chr5_3:764493-764512 | Msa0790120:CDS | 35.0% |
| ! | TGTTAAGGTTTGGGATGTTA+GGG | + | chr5_3:764494-764513 | Msa0790120:CDS | 35.0% |
| ATTAAAATCCATCACCGAGT+TGG | - | chr5_3:764532-764551 | None:intergenic | 35.0% | |
| !!! | TCGGTGATGGATTTTAATCA+TGG | + | chr5_3:764534-764553 | Msa0790120:CDS | 35.0% |
| ! | TTTTAATCATGGTTGTCCTG+TGG | + | chr5_3:764545-764564 | Msa0790120:CDS | 35.0% |
| AAATAAACAACATCCTCCAC+AGG | - | chr5_3:764564-764583 | None:intergenic | 35.0% | |
| ! | GTCAAGATTTGGGATTTGAT+TGG | + | chr5_3:764624-764643 | Msa0790120:CDS | 35.0% |
| ! | AAGATTTGGGATTTGATTGG+TGG | + | chr5_3:764627-764646 | Msa0790120:CDS | 35.0% |
| CATGGAGAGTCATAATAAGA+CGG | + | chr5_3:764668-764687 | Msa0790120:CDS | 35.0% | |
| CAGTATAGGATTATGAGTGT+TGG | + | chr5_3:764744-764763 | Msa0790120:CDS | 35.0% | |
| !! | TAGGATTATGAGTGTTGGTT+TGG | + | chr5_3:764749-764768 | Msa0790120:CDS | 35.0% |
| !! | ATTATGAGTGTTGGTTTGGA+TGG | + | chr5_3:764753-764772 | Msa0790120:CDS | 35.0% |
| TGAAGGTTACTTATTCGATG+AGG | + | chr5_3:764805-764824 | Msa0790120:CDS | 35.0% | |
| GGATAATTTATGCTGCAAAG+AGG | + | chr5_3:764898-764917 | Msa0790120:CDS | 35.0% | |
| AATTTATGCTGCAAAGAGGA+AGG | + | chr5_3:764902-764921 | Msa0790120:CDS | 35.0% | |
| TGATTTAGATTTGGAGAAGC+TGG | + | chr5_3:765244-765263 | Msa0790120:CDS | 35.0% | |
| !! | GTTAATGGGATTGGCTAATA+AGG | + | chr5_3:765322-765341 | Msa0790120:CDS | 35.0% |
| AAATGAGGGCTGATGATATT+AGG | + | chr5_3:765351-765370 | Msa0790120:CDS | 35.0% | |
| TTGGGATTGTGTTCTTGGTT+TGG | - | chr5_3:763968-763987 | None:intergenic | 40.0% | |
| AGACCAGTATTTGGATTCAG+AGG | - | chr5_3:763992-764011 | None:intergenic | 40.0% | |
| !!! | AGGGATTTGTTGGGTTTTGA+AGG | - | chr5_3:764016-764035 | None:intergenic | 40.0% |
| GAAGGGATGGAGAATTGTTT+AGG | - | chr5_3:764036-764055 | None:intergenic | 40.0% | |
| AAGAGTTTGAGAGCTGAAGA+TGG | - | chr5_3:764118-764137 | None:intergenic | 40.0% | |
| AGATTTGAATTAACCCGGAG+AGG | - | chr5_3:764227-764246 | None:intergenic | 40.0% | |
| GATCAAACAATCGTCCTGTT+AGG | + | chr5_3:764283-764302 | Msa0790120:CDS | 40.0% | |
| ATGATGCCGTTGTTAGGTAT+TGG | + | chr5_3:764355-764374 | Msa0790120:CDS | 40.0% | |
| TGATGCCGTTGTTAGGTATT+GGG | + | chr5_3:764356-764375 | Msa0790120:CDS | 40.0% | |
| !! | TAGGTATTGGGATGTTACTG+AGG | + | chr5_3:764368-764387 | Msa0790120:CDS | 40.0% |
| ! | GGAGGATGTTGTTTATTTGC+CGG | + | chr5_3:764566-764585 | Msa0790120:CDS | 40.0% |
| ! | GAGGATGTTGTTTATTTGCC+GGG | + | chr5_3:764567-764586 | Msa0790120:CDS | 40.0% |
| ! | ATTTGGGATTTGATTGGTGG+TGG | + | chr5_3:764630-764649 | Msa0790120:CDS | 40.0% |
| ! | TTTGGGATTTGATTGGTGGT+GGG | + | chr5_3:764631-764650 | Msa0790120:CDS | 40.0% |
| ! | CGTCTTATTATGACTCTCCA+TGG | - | chr5_3:764670-764689 | None:intergenic | 40.0% |
| AAGATTTGTGTTGGGAGGAT+CGG | + | chr5_3:764696-764715 | Msa0790120:CDS | 40.0% | |
| GAATACCCAACAGACAAAAG+CGG | - | chr5_3:764840-764859 | None:intergenic | 40.0% | |
| ATCACCCTAGTAGAACAATC+CGG | - | chr5_3:764864-764883 | None:intergenic | 40.0% | |
| GATTGTTCTACTAGGGTGAT+TGG | + | chr5_3:764864-764883 | Msa0790120:CDS | 40.0% | |
| !! | CTAGTTCGGTTTGGAGAATT+AGG | + | chr5_3:764961-764980 | Msa0790120:CDS | 40.0% |
| ! | AGGTATTTTCAAAGAGGGCA+AGG | + | chr5_3:765029-765048 | Msa0790120:CDS | 40.0% |
| CTTGGTTATGAAGCCAAAGA+AGG | + | chr5_3:765076-765095 | Msa0790120:CDS | 40.0% | |
| GAATAAGTTTAGGCATGGTG+AGG | + | chr5_3:765127-765146 | Msa0790120:CDS | 40.0% | |
| TGTTGGAAGGTAAGAATCCA+GGG | + | chr5_3:765162-765181 | Msa0790120:CDS | 40.0% | |
| TGTCTAGGAAGAAGTTGTTG+AGG | + | chr5_3:765213-765232 | Msa0790120:CDS | 40.0% | |
| AGTCGTTGCAAGAGATACAA+GGG | + | chr5_3:765444-765463 | Msa0790120:CDS | 40.0% | |
| TCTCCTTTGTTGAGAATTGC+TGG | + | chr5_3:765473-765492 | Msa0790120:CDS | 40.0% | |
| CTTCCAGCAATTCTCAACAA+AGG | - | chr5_3:765479-765498 | None:intergenic | 40.0% | |
| TTGGGATTGTGTTCTTGGTT+TGG | - | chr5_3:763968-763987 | None:intergenic | 40.0% | |
| AGACCAGTATTTGGATTCAG+AGG | - | chr5_3:763992-764011 | None:intergenic | 40.0% | |
| !!! | AGGGATTTGTTGGGTTTTGA+AGG | - | chr5_3:764016-764035 | None:intergenic | 40.0% |
| GAAGGGATGGAGAATTGTTT+AGG | - | chr5_3:764036-764055 | None:intergenic | 40.0% | |
| AAGAGTTTGAGAGCTGAAGA+TGG | - | chr5_3:764118-764137 | None:intergenic | 40.0% | |
| AGATTTGAATTAACCCGGAG+AGG | - | chr5_3:764227-764246 | None:intergenic | 40.0% | |
| GATCAAACAATCGTCCTGTT+AGG | + | chr5_3:764283-764302 | Msa0790120:CDS | 40.0% | |
| ATGATGCCGTTGTTAGGTAT+TGG | + | chr5_3:764355-764374 | Msa0790120:CDS | 40.0% | |
| TGATGCCGTTGTTAGGTATT+GGG | + | chr5_3:764356-764375 | Msa0790120:CDS | 40.0% | |
| !! | TAGGTATTGGGATGTTACTG+AGG | + | chr5_3:764368-764387 | Msa0790120:CDS | 40.0% |
| ! | GGAGGATGTTGTTTATTTGC+CGG | + | chr5_3:764566-764585 | Msa0790120:CDS | 40.0% |
| ! | GAGGATGTTGTTTATTTGCC+GGG | + | chr5_3:764567-764586 | Msa0790120:CDS | 40.0% |
| ! | ATTTGGGATTTGATTGGTGG+TGG | + | chr5_3:764630-764649 | Msa0790120:CDS | 40.0% |
| ! | TTTGGGATTTGATTGGTGGT+GGG | + | chr5_3:764631-764650 | Msa0790120:CDS | 40.0% |
| ! | CGTCTTATTATGACTCTCCA+TGG | - | chr5_3:764670-764689 | None:intergenic | 40.0% |
| AAGATTTGTGTTGGGAGGAT+CGG | + | chr5_3:764696-764715 | Msa0790120:CDS | 40.0% | |
| GAATACCCAACAGACAAAAG+CGG | - | chr5_3:764840-764859 | None:intergenic | 40.0% | |
| ATCACCCTAGTAGAACAATC+CGG | - | chr5_3:764864-764883 | None:intergenic | 40.0% | |
| GATTGTTCTACTAGGGTGAT+TGG | + | chr5_3:764864-764883 | Msa0790120:CDS | 40.0% | |
| !! | CTAGTTCGGTTTGGAGAATT+AGG | + | chr5_3:764961-764980 | Msa0790120:CDS | 40.0% |
| ! | AGGTATTTTCAAAGAGGGCA+AGG | + | chr5_3:765029-765048 | Msa0790120:CDS | 40.0% |
| CTTGGTTATGAAGCCAAAGA+AGG | + | chr5_3:765076-765095 | Msa0790120:CDS | 40.0% | |
| GAATAAGTTTAGGCATGGTG+AGG | + | chr5_3:765127-765146 | Msa0790120:CDS | 40.0% | |
| TGTTGGAAGGTAAGAATCCA+GGG | + | chr5_3:765162-765181 | Msa0790120:CDS | 40.0% | |
| TGTCTAGGAAGAAGTTGTTG+AGG | + | chr5_3:765213-765232 | Msa0790120:CDS | 40.0% | |
| AGTCGTTGCAAGAGATACAA+GGG | + | chr5_3:765444-765463 | Msa0790120:CDS | 40.0% | |
| TCTCCTTTGTTGAGAATTGC+TGG | + | chr5_3:765473-765492 | Msa0790120:CDS | 40.0% | |
| CTTCCAGCAATTCTCAACAA+AGG | - | chr5_3:765479-765498 | None:intergenic | 40.0% | |
| ! | GAGGTTTGGGATTGTGTTCT+TGG | - | chr5_3:763973-763992 | None:intergenic | 45.0% |
| ! | GAAGGAATAGGGTGGATTTG+GGG | - | chr5_3:764070-764089 | None:intergenic | 45.0% |
| ! | CGAAGGAATAGGGTGGATTT+GGG | - | chr5_3:764071-764090 | None:intergenic | 45.0% |
| TTGAGAGCTGAAGATGGAGA+GGG | - | chr5_3:764112-764131 | None:intergenic | 45.0% | |
| TTTGAGAGCTGAAGATGGAG+AGG | - | chr5_3:764113-764132 | None:intergenic | 45.0% | |
| AGCATCGTTACGGAAAGAGA+CGG | - | chr5_3:764184-764203 | None:intergenic | 45.0% | |
| ! | TTGATCTAAGACGACGGAGA+CGG | - | chr5_3:764269-764288 | None:intergenic | 45.0% |
| ! | GTAGTGATGATGCCGTTGTT+AGG | + | chr5_3:764349-764368 | Msa0790120:CDS | 45.0% |
| GGATGTTACTGAGGAAACTC+CGG | + | chr5_3:764377-764396 | Msa0790120:CDS | 45.0% | |
| ! | GTTTGGGATGTTAGGGTTAG+AGG | + | chr5_3:764501-764520 | Msa0790120:CDS | 45.0% |
| TAATCATGGTTGTCCTGTGG+AGG | + | chr5_3:764548-764567 | Msa0790120:CDS | 45.0% | |
| ! | GATGTTGTTTATTTGCCGGG+TGG | + | chr5_3:764570-764589 | Msa0790120:CDS | 45.0% |
| TTGTTTATTTGCCGGGTGGT+GGG | + | chr5_3:764574-764593 | Msa0790120:CDS | 45.0% | |
| TGGGAATGCGGTCAAGATTT+GGG | + | chr5_3:764614-764633 | Msa0790120:CDS | 45.0% | |
| ACGGTGACGAAGATTTGTGT+TGG | + | chr5_3:764687-764706 | Msa0790120:CDS | 45.0% | |
| CGGTGACGAAGATTTGTGTT+GGG | + | chr5_3:764688-764707 | Msa0790120:CDS | 45.0% | |
| TGACGAAGATTTGTGTTGGG+AGG | + | chr5_3:764691-764710 | Msa0790120:CDS | 45.0% | |
| AGATTTGTGTTGGGAGGATC+GGG | + | chr5_3:764697-764716 | Msa0790120:CDS | 45.0% | |
| GGAATGAGTCGGATCAGTAT+AGG | + | chr5_3:764730-764749 | Msa0790120:CDS | 45.0% | |
| TTTGTCTGTTGGGTATTCGC+CGG | + | chr5_3:764842-764861 | Msa0790120:CDS | 45.0% | |
| ATTCGCCGGATTGTTCTACT+AGG | + | chr5_3:764856-764875 | Msa0790120:CDS | 45.0% | |
| TTCGCCGGATTGTTCTACTA+GGG | + | chr5_3:764857-764876 | Msa0790120:CDS | 45.0% | |
| AGGGTGATTGGAACTTCGAA+TGG | + | chr5_3:764876-764895 | Msa0790120:CDS | 45.0% | |
| GGGTGATTGGAACTTCGAAT+GGG | + | chr5_3:764877-764896 | Msa0790120:CDS | 45.0% | |
| TGCTGCAAAGAGGAAGGTAA+AGG | + | chr5_3:764908-764927 | Msa0790120:CDS | 45.0% | |
| TGCAAAGAGGAAGGTAAAGG+TGG | + | chr5_3:764911-764930 | Msa0790120:CDS | 45.0% | |
| GAAGGTAAAGGTGGATGAGA+AGG | + | chr5_3:764920-764939 | Msa0790120:CDS | 45.0% | |
| AAGGTGGATGAGAAGGAAGT+TGG | + | chr5_3:764927-764946 | Msa0790120:CDS | 45.0% | |
| AGGTGGATGAGAAGGAAGTT+GGG | + | chr5_3:764928-764947 | Msa0790120:CDS | 45.0% | |
| !! | TTCGGTTTGGAGAATTAGGC+CGG | + | chr5_3:764965-764984 | Msa0790120:CDS | 45.0% |
| TTCTTCTCAGTATCCTCCAC+CGG | - | chr5_3:764987-765006 | None:intergenic | 45.0% | |
| CAAGGTGAGAAACCATCTGA+GGG | + | chr5_3:765047-765066 | Msa0790120:CDS | 45.0% | |
| ACCATCTGAGGGTGATTACT+TGG | + | chr5_3:765058-765077 | Msa0790120:CDS | 45.0% | |
| ACCAAGTAATCACCCTCAGA+TGG | - | chr5_3:765062-765081 | None:intergenic | 45.0% | |
| GCAGTCAACTTCACCTTCTT+TGG | - | chr5_3:765092-765111 | None:intergenic | 45.0% | |
| GTGTTGGAAGGTAAGAATCC+AGG | + | chr5_3:765161-765180 | Msa0790120:CDS | 45.0% | |
| ! | TGATGGAGGAATTGGTGTCT+AGG | + | chr5_3:765198-765217 | Msa0790120:CDS | 45.0% |
| CAGTCGTTGCAAGAGATACA+AGG | + | chr5_3:765443-765462 | Msa0790120:CDS | 45.0% | |
| ! | GAGGTTTGGGATTGTGTTCT+TGG | - | chr5_3:763973-763992 | None:intergenic | 45.0% |
| ! | GAAGGAATAGGGTGGATTTG+GGG | - | chr5_3:764070-764089 | None:intergenic | 45.0% |
| ! | CGAAGGAATAGGGTGGATTT+GGG | - | chr5_3:764071-764090 | None:intergenic | 45.0% |
| TTGAGAGCTGAAGATGGAGA+GGG | - | chr5_3:764112-764131 | None:intergenic | 45.0% | |
| TTTGAGAGCTGAAGATGGAG+AGG | - | chr5_3:764113-764132 | None:intergenic | 45.0% | |
| AGCATCGTTACGGAAAGAGA+CGG | - | chr5_3:764184-764203 | None:intergenic | 45.0% | |
| ! | TTGATCTAAGACGACGGAGA+CGG | - | chr5_3:764269-764288 | None:intergenic | 45.0% |
| ! | GTAGTGATGATGCCGTTGTT+AGG | + | chr5_3:764349-764368 | Msa0790120:CDS | 45.0% |
| GGATGTTACTGAGGAAACTC+CGG | + | chr5_3:764377-764396 | Msa0790120:CDS | 45.0% | |
| ! | GTTTGGGATGTTAGGGTTAG+AGG | + | chr5_3:764501-764520 | Msa0790120:CDS | 45.0% |
| TAATCATGGTTGTCCTGTGG+AGG | + | chr5_3:764548-764567 | Msa0790120:CDS | 45.0% | |
| ! | GATGTTGTTTATTTGCCGGG+TGG | + | chr5_3:764570-764589 | Msa0790120:CDS | 45.0% |
| TTGTTTATTTGCCGGGTGGT+GGG | + | chr5_3:764574-764593 | Msa0790120:CDS | 45.0% | |
| TGGGAATGCGGTCAAGATTT+GGG | + | chr5_3:764614-764633 | Msa0790120:CDS | 45.0% | |
| ACGGTGACGAAGATTTGTGT+TGG | + | chr5_3:764687-764706 | Msa0790120:CDS | 45.0% | |
| CGGTGACGAAGATTTGTGTT+GGG | + | chr5_3:764688-764707 | Msa0790120:CDS | 45.0% | |
| TGACGAAGATTTGTGTTGGG+AGG | + | chr5_3:764691-764710 | Msa0790120:CDS | 45.0% | |
| AGATTTGTGTTGGGAGGATC+GGG | + | chr5_3:764697-764716 | Msa0790120:CDS | 45.0% | |
| GGAATGAGTCGGATCAGTAT+AGG | + | chr5_3:764730-764749 | Msa0790120:CDS | 45.0% | |
| TTTGTCTGTTGGGTATTCGC+CGG | + | chr5_3:764842-764861 | Msa0790120:CDS | 45.0% | |
| ATTCGCCGGATTGTTCTACT+AGG | + | chr5_3:764856-764875 | Msa0790120:CDS | 45.0% | |
| TTCGCCGGATTGTTCTACTA+GGG | + | chr5_3:764857-764876 | Msa0790120:CDS | 45.0% | |
| AGGGTGATTGGAACTTCGAA+TGG | + | chr5_3:764876-764895 | Msa0790120:CDS | 45.0% | |
| GGGTGATTGGAACTTCGAAT+GGG | + | chr5_3:764877-764896 | Msa0790120:CDS | 45.0% | |
| TGCTGCAAAGAGGAAGGTAA+AGG | + | chr5_3:764908-764927 | Msa0790120:CDS | 45.0% | |
| TGCAAAGAGGAAGGTAAAGG+TGG | + | chr5_3:764911-764930 | Msa0790120:CDS | 45.0% | |
| GAAGGTAAAGGTGGATGAGA+AGG | + | chr5_3:764920-764939 | Msa0790120:CDS | 45.0% | |
| AAGGTGGATGAGAAGGAAGT+TGG | + | chr5_3:764927-764946 | Msa0790120:CDS | 45.0% | |
| AGGTGGATGAGAAGGAAGTT+GGG | + | chr5_3:764928-764947 | Msa0790120:CDS | 45.0% | |
| !! | TTCGGTTTGGAGAATTAGGC+CGG | + | chr5_3:764965-764984 | Msa0790120:CDS | 45.0% |
| TTCTTCTCAGTATCCTCCAC+CGG | - | chr5_3:764987-765006 | None:intergenic | 45.0% | |
| CAAGGTGAGAAACCATCTGA+GGG | + | chr5_3:765047-765066 | Msa0790120:CDS | 45.0% | |
| ACCATCTGAGGGTGATTACT+TGG | + | chr5_3:765058-765077 | Msa0790120:CDS | 45.0% | |
| ACCAAGTAATCACCCTCAGA+TGG | - | chr5_3:765062-765081 | None:intergenic | 45.0% | |
| GCAGTCAACTTCACCTTCTT+TGG | - | chr5_3:765092-765111 | None:intergenic | 45.0% | |
| GTGTTGGAAGGTAAGAATCC+AGG | + | chr5_3:765161-765180 | Msa0790120:CDS | 45.0% | |
| ! | TGATGGAGGAATTGGTGTCT+AGG | + | chr5_3:765198-765217 | Msa0790120:CDS | 45.0% |
| CAGTCGTTGCAAGAGATACA+AGG | + | chr5_3:765443-765462 | Msa0790120:CDS | 45.0% | |
| !! | TTGGGGAGAAGGTGATGGAA+GGG | - | chr5_3:764053-764072 | None:intergenic | 50.0% |
| !! | TTTGGGGAGAAGGTGATGGA+AGG | - | chr5_3:764054-764073 | None:intergenic | 50.0% |
| TGGATTTGGGGAGAAGGTGA+TGG | - | chr5_3:764058-764077 | None:intergenic | 50.0% | |
| ! | ATAGGGTGGATTTGGGGAGA+AGG | - | chr5_3:764064-764083 | None:intergenic | 50.0% |
| ! | GCGAAGGAATAGGGTGGATT+TGG | - | chr5_3:764072-764091 | None:intergenic | 50.0% |
| GGAGAGGGAAGCTGAATTAG+CGG | - | chr5_3:764097-764116 | None:intergenic | 50.0% | |
| ATCGTTACGGAAAGAGACGG+AGG | - | chr5_3:764181-764200 | None:intergenic | 50.0% | |
| ! | TGATCTAAGACGACGGAGAC+GGG | - | chr5_3:764268-764287 | None:intergenic | 50.0% |
| TACTGAGGAAACTCCGGTCA+TGG | + | chr5_3:764383-764402 | Msa0790120:CDS | 50.0% | |
| CATGGTGTTTCGTGGCCATA+AGG | + | chr5_3:764401-764420 | Msa0790120:CDS | 50.0% | |
| TAGATGTGGTGATTCGTCCC+CGG | + | chr5_3:764431-764450 | Msa0790120:CDS | 50.0% | |
| GGTTAGAGGTGAGACCAACT+CGG | + | chr5_3:764515-764534 | Msa0790120:CDS | 50.0% | |
| GTTGTTTATTTGCCGGGTGG+TGG | + | chr5_3:764573-764592 | Msa0790120:CDS | 50.0% | |
| GGATGATTGCAACAGCTGGT+GGG | + | chr5_3:764595-764614 | Msa0790120:CDS | 50.0% | |
| GTGGGAATGCGGTCAAGATT+TGG | + | chr5_3:764613-764632 | Msa0790120:CDS | 50.0% | |
| TGGGAGGCTTGTGTATTCCA+TGG | + | chr5_3:764650-764669 | Msa0790120:CDS | 50.0% | |
| GAAGGATTCGGGGAATGAGT+CGG | + | chr5_3:764719-764738 | Msa0790120:CDS | 50.0% | |
| GGTGGATGAGAAGGAAGTTG+GGG | + | chr5_3:764929-764948 | Msa0790120:CDS | 50.0% | |
| ! | TGAGTGAGGCTAGTTCGGTT+TGG | + | chr5_3:764952-764971 | Msa0790120:CDS | 50.0% |
| GGTGGAGGATACTGAGAAGA+AGG | + | chr5_3:764986-765005 | Msa0790120:CDS | 50.0% | |
| GCAAGGTGAGAAACCATCTG+AGG | + | chr5_3:765046-765065 | Msa0790120:CDS | 50.0% | |
| AGGTAAGAATCCAGGGCATG+TGG | + | chr5_3:765169-765188 | Msa0790120:CDS | 50.0% | |
| ! | GGTTGCTGTGATGGAGGAAT+TGG | + | chr5_3:765190-765209 | Msa0790120:CDS | 50.0% |
| ! | GGAGAAGCTGGAACTGCTTT+TGG | + | chr5_3:765256-765275 | Msa0790120:CDS | 50.0% |
| GCACTGTCGAGACAGAGATT+CGG | + | chr5_3:765414-765433 | Msa0790120:CDS | 50.0% | |
| !! | TTGGGGAGAAGGTGATGGAA+GGG | - | chr5_3:764053-764072 | None:intergenic | 50.0% |
| !! | TTTGGGGAGAAGGTGATGGA+AGG | - | chr5_3:764054-764073 | None:intergenic | 50.0% |
| TGGATTTGGGGAGAAGGTGA+TGG | - | chr5_3:764058-764077 | None:intergenic | 50.0% | |
| ! | ATAGGGTGGATTTGGGGAGA+AGG | - | chr5_3:764064-764083 | None:intergenic | 50.0% |
| ! | GCGAAGGAATAGGGTGGATT+TGG | - | chr5_3:764072-764091 | None:intergenic | 50.0% |
| GGAGAGGGAAGCTGAATTAG+CGG | - | chr5_3:764097-764116 | None:intergenic | 50.0% | |
| ATCGTTACGGAAAGAGACGG+AGG | - | chr5_3:764181-764200 | None:intergenic | 50.0% | |
| ! | TGATCTAAGACGACGGAGAC+GGG | - | chr5_3:764268-764287 | None:intergenic | 50.0% |
| TACTGAGGAAACTCCGGTCA+TGG | + | chr5_3:764383-764402 | Msa0790120:CDS | 50.0% | |
| CATGGTGTTTCGTGGCCATA+AGG | + | chr5_3:764401-764420 | Msa0790120:CDS | 50.0% | |
| TAGATGTGGTGATTCGTCCC+CGG | + | chr5_3:764431-764450 | Msa0790120:CDS | 50.0% | |
| GGTTAGAGGTGAGACCAACT+CGG | + | chr5_3:764515-764534 | Msa0790120:CDS | 50.0% | |
| GTTGTTTATTTGCCGGGTGG+TGG | + | chr5_3:764573-764592 | Msa0790120:CDS | 50.0% | |
| GGATGATTGCAACAGCTGGT+GGG | + | chr5_3:764595-764614 | Msa0790120:CDS | 50.0% | |
| GTGGGAATGCGGTCAAGATT+TGG | + | chr5_3:764613-764632 | Msa0790120:CDS | 50.0% | |
| TGGGAGGCTTGTGTATTCCA+TGG | + | chr5_3:764650-764669 | Msa0790120:CDS | 50.0% | |
| GAAGGATTCGGGGAATGAGT+CGG | + | chr5_3:764719-764738 | Msa0790120:CDS | 50.0% | |
| GGTGGATGAGAAGGAAGTTG+GGG | + | chr5_3:764929-764948 | Msa0790120:CDS | 50.0% | |
| ! | TGAGTGAGGCTAGTTCGGTT+TGG | + | chr5_3:764952-764971 | Msa0790120:CDS | 50.0% |
| GGTGGAGGATACTGAGAAGA+AGG | + | chr5_3:764986-765005 | Msa0790120:CDS | 50.0% | |
| GCAAGGTGAGAAACCATCTG+AGG | + | chr5_3:765046-765065 | Msa0790120:CDS | 50.0% | |
| AGGTAAGAATCCAGGGCATG+TGG | + | chr5_3:765169-765188 | Msa0790120:CDS | 50.0% | |
| ! | GGTTGCTGTGATGGAGGAAT+TGG | + | chr5_3:765190-765209 | Msa0790120:CDS | 50.0% |
| ! | GGAGAAGCTGGAACTGCTTT+TGG | + | chr5_3:765256-765275 | Msa0790120:CDS | 50.0% |
| GCACTGTCGAGACAGAGATT+CGG | + | chr5_3:765414-765433 | Msa0790120:CDS | 50.0% | |
| !! | GGAGAAGGTGATGGAAGGGA+TGG | - | chr5_3:764049-764068 | None:intergenic | 55.0% |
| TTAGCGGCGGCGAAGGAATA+GGG | - | chr5_3:764081-764100 | None:intergenic | 55.0% | |
| ATTAGCGGCGGCGAAGGAAT+AGG | - | chr5_3:764082-764101 | None:intergenic | 55.0% | |
| GAGGGAAGCTGAATTAGCGG+CGG | - | chr5_3:764094-764113 | None:intergenic | 55.0% | |
| ACGGAAAGAGACGGAGGAGA+CGG | - | chr5_3:764175-764194 | None:intergenic | 55.0% | |
| ! | CGAGGAGACGAGCATCGTTA+CGG | - | chr5_3:764194-764213 | None:intergenic | 55.0% |
| TAACCCGGAGAGGTCAGAAG+CGG | - | chr5_3:764217-764236 | None:intergenic | 55.0% | |
| ACTCCGGTCATGGTGTTTCG+TGG | + | chr5_3:764393-764412 | Msa0790120:CDS | 55.0% | |
| TGGCCACGAAACACCATGAC+CGG | - | chr5_3:764399-764418 | None:intergenic | 55.0% | |
| ! | AGGTGAGACCAACTCGGTGA+TGG | + | chr5_3:764521-764540 | Msa0790120:CDS | 55.0% |
| GTTGCAATCATCCCACCACC+CGG | - | chr5_3:764588-764607 | None:intergenic | 55.0% | |
| GGTGGGATGATTGCAACAGC+TGG | + | chr5_3:764591-764610 | Msa0790120:CDS | 55.0% | |
| GGGATGATTGCAACAGCTGG+TGG | + | chr5_3:764594-764613 | Msa0790120:CDS | 55.0% | |
| TGCAACAGCTGGTGGGAATG+CGG | + | chr5_3:764602-764621 | Msa0790120:CDS | 55.0% | |
| !! | GGGATTTGATTGGTGGTGGG+AGG | + | chr5_3:764634-764653 | Msa0790120:CDS | 55.0% |
| TTGTGTTGGGAGGATCGGGA+AGG | + | chr5_3:764701-764720 | Msa0790120:CDS | 55.0% | |
| TGGGAGGATCGGGAAGGATT+CGG | + | chr5_3:764707-764726 | Msa0790120:CDS | 55.0% | |
| !!! | CTGCGCCGCTTTTGTCTGTT+GGG | + | chr5_3:764832-764851 | Msa0790120:CDS | 55.0% |
| GAAGGAAGTTGGGGTGAGTG+AGG | + | chr5_3:764938-764957 | Msa0790120:CDS | 55.0% | |
| ! | TGGGGTGAGTGAGGCTAGTT+CGG | + | chr5_3:764947-764966 | Msa0790120:CDS | 55.0% |
| GGTTTGGAGAATTAGGCCGG+TGG | + | chr5_3:764968-764987 | Msa0790120:CDS | 55.0% | |
| TTGGAGAATTAGGCCGGTGG+AGG | + | chr5_3:764971-764990 | Msa0790120:CDS | 55.0% | |
| TGAGGCTCTTGTGTGCGTGT+TGG | + | chr5_3:765145-765164 | Msa0790120:CDS | 55.0% | |
| GCTCTTGTGTGCGTGTTGGA+AGG | + | chr5_3:765149-765168 | Msa0790120:CDS | 55.0% | |
| ATCACAGCAACCACATGCCC+TGG | - | chr5_3:765182-765201 | None:intergenic | 55.0% | |
| AGGGCATGTGGTTGCTGTGA+TGG | + | chr5_3:765181-765200 | Msa0790120:CDS | 55.0% | |
| GCATGTGGTTGCTGTGATGG+AGG | + | chr5_3:765184-765203 | Msa0790120:CDS | 55.0% | |
| !! | GGAGAAGGTGATGGAAGGGA+TGG | - | chr5_3:764049-764068 | None:intergenic | 55.0% |
| TTAGCGGCGGCGAAGGAATA+GGG | - | chr5_3:764081-764100 | None:intergenic | 55.0% | |
| ATTAGCGGCGGCGAAGGAAT+AGG | - | chr5_3:764082-764101 | None:intergenic | 55.0% | |
| GAGGGAAGCTGAATTAGCGG+CGG | - | chr5_3:764094-764113 | None:intergenic | 55.0% | |
| ACGGAAAGAGACGGAGGAGA+CGG | - | chr5_3:764175-764194 | None:intergenic | 55.0% | |
| ! | CGAGGAGACGAGCATCGTTA+CGG | - | chr5_3:764194-764213 | None:intergenic | 55.0% |
| TAACCCGGAGAGGTCAGAAG+CGG | - | chr5_3:764217-764236 | None:intergenic | 55.0% | |
| ACTCCGGTCATGGTGTTTCG+TGG | + | chr5_3:764393-764412 | Msa0790120:CDS | 55.0% | |
| TGGCCACGAAACACCATGAC+CGG | - | chr5_3:764399-764418 | None:intergenic | 55.0% | |
| ! | AGGTGAGACCAACTCGGTGA+TGG | + | chr5_3:764521-764540 | Msa0790120:CDS | 55.0% |
| GTTGCAATCATCCCACCACC+CGG | - | chr5_3:764588-764607 | None:intergenic | 55.0% | |
| GGTGGGATGATTGCAACAGC+TGG | + | chr5_3:764591-764610 | Msa0790120:CDS | 55.0% | |
| GGGATGATTGCAACAGCTGG+TGG | + | chr5_3:764594-764613 | Msa0790120:CDS | 55.0% | |
| TGCAACAGCTGGTGGGAATG+CGG | + | chr5_3:764602-764621 | Msa0790120:CDS | 55.0% | |
| !! | GGGATTTGATTGGTGGTGGG+AGG | + | chr5_3:764634-764653 | Msa0790120:CDS | 55.0% |
| TTGTGTTGGGAGGATCGGGA+AGG | + | chr5_3:764701-764720 | Msa0790120:CDS | 55.0% | |
| TGGGAGGATCGGGAAGGATT+CGG | + | chr5_3:764707-764726 | Msa0790120:CDS | 55.0% | |
| !!! | CTGCGCCGCTTTTGTCTGTT+GGG | + | chr5_3:764832-764851 | Msa0790120:CDS | 55.0% |
| GAAGGAAGTTGGGGTGAGTG+AGG | + | chr5_3:764938-764957 | Msa0790120:CDS | 55.0% | |
| ! | TGGGGTGAGTGAGGCTAGTT+CGG | + | chr5_3:764947-764966 | Msa0790120:CDS | 55.0% |
| GGTTTGGAGAATTAGGCCGG+TGG | + | chr5_3:764968-764987 | Msa0790120:CDS | 55.0% | |
| TTGGAGAATTAGGCCGGTGG+AGG | + | chr5_3:764971-764990 | Msa0790120:CDS | 55.0% | |
| TGAGGCTCTTGTGTGCGTGT+TGG | + | chr5_3:765145-765164 | Msa0790120:CDS | 55.0% | |
| GCTCTTGTGTGCGTGTTGGA+AGG | + | chr5_3:765149-765168 | Msa0790120:CDS | 55.0% | |
| ATCACAGCAACCACATGCCC+TGG | - | chr5_3:765182-765201 | None:intergenic | 55.0% | |
| AGGGCATGTGGTTGCTGTGA+TGG | + | chr5_3:765181-765200 | Msa0790120:CDS | 55.0% | |
| GCATGTGGTTGCTGTGATGG+AGG | + | chr5_3:765184-765203 | Msa0790120:CDS | 55.0% | |
| AGCTGAATTAGCGGCGGCGA+AGG | - | chr5_3:764088-764107 | None:intergenic | 60.0% | |
| !! | AGGAGGAGATGGTGGCGGTT+TGG | - | chr5_3:764143-764162 | None:intergenic | 60.0% |
| ! | GGAGAAGGAGGAGATGGTGG+CGG | - | chr5_3:764148-764167 | None:intergenic | 60.0% |
| GTCGGAGAAGGAGGAGATGG+TGG | - | chr5_3:764151-764170 | None:intergenic | 60.0% | |
| ! | GGTGTCGGAGAAGGAGGAGA+TGG | - | chr5_3:764154-764173 | None:intergenic | 60.0% |
| AGAGACGGAGGAGACGGTGT+CGG | - | chr5_3:764169-764188 | None:intergenic | 60.0% | |
| GGGAGGATCGGGAAGGATTC+GGG | + | chr5_3:764708-764727 | Msa0790120:CDS | 60.0% | |
| GGAGGATCGGGAAGGATTCG+GGG | + | chr5_3:764709-764728 | Msa0790120:CDS | 60.0% | |
| CCAACAGACAAAAGCGGCGC+AGG | - | chr5_3:764834-764853 | None:intergenic | 60.0% | |
| !!! | CCTGCGCCGCTTTTGTCTGT+TGG | + | chr5_3:764831-764850 | Msa0790120:CDS | 60.0% |
| AGCTGAATTAGCGGCGGCGA+AGG | - | chr5_3:764088-764107 | None:intergenic | 60.0% | |
| !! | AGGAGGAGATGGTGGCGGTT+TGG | - | chr5_3:764143-764162 | None:intergenic | 60.0% |
| ! | GGAGAAGGAGGAGATGGTGG+CGG | - | chr5_3:764148-764167 | None:intergenic | 60.0% |
| GTCGGAGAAGGAGGAGATGG+TGG | - | chr5_3:764151-764170 | None:intergenic | 60.0% | |
| ! | GGTGTCGGAGAAGGAGGAGA+TGG | - | chr5_3:764154-764173 | None:intergenic | 60.0% |
| AGAGACGGAGGAGACGGTGT+CGG | - | chr5_3:764169-764188 | None:intergenic | 60.0% | |
| GGGAGGATCGGGAAGGATTC+GGG | + | chr5_3:764708-764727 | Msa0790120:CDS | 60.0% | |
| GGAGGATCGGGAAGGATTCG+GGG | + | chr5_3:764709-764728 | Msa0790120:CDS | 60.0% | |
| CCAACAGACAAAAGCGGCGC+AGG | - | chr5_3:764834-764853 | None:intergenic | 60.0% | |
| !!! | CCTGCGCCGCTTTTGTCTGT+TGG | + | chr5_3:764831-764850 | Msa0790120:CDS | 60.0% |
| ! | GGAGACGGTGTCGGAGAAGG+AGG | - | chr5_3:764160-764179 | None:intergenic | 65.0% |
| ! | GGAGGAGACGGTGTCGGAGA+AGG | - | chr5_3:764163-764182 | None:intergenic | 65.0% |
| CTCGCCGCTTCTGACCTCTC+CGG | + | chr5_3:764210-764229 | Msa0790120:CDS | 65.0% | |
| TCGCCGCTTCTGACCTCTCC+GGG | + | chr5_3:764211-764230 | Msa0790120:CDS | 65.0% | |
| ! | GGAGACGGTGTCGGAGAAGG+AGG | - | chr5_3:764160-764179 | None:intergenic | 65.0% |
| ! | GGAGGAGACGGTGTCGGAGA+AGG | - | chr5_3:764163-764182 | None:intergenic | 65.0% |
| CTCGCCGCTTCTGACCTCTC+CGG | + | chr5_3:764210-764229 | Msa0790120:CDS | 65.0% | |
| TCGCCGCTTCTGACCTCTCC+GGG | + | chr5_3:764211-764230 | Msa0790120:CDS | 65.0% | |
| GCGGCGGCGAAGGAATAGGG+TGG | - | chr5_3:764078-764097 | None:intergenic | 70.0% | |
| CGGAGAGGTCAGAAGCGGCG+AGG | - | chr5_3:764212-764231 | None:intergenic | 70.0% | |
| GCGGCGGCGAAGGAATAGGG+TGG | - | chr5_3:764078-764097 | None:intergenic | 70.0% | |
| CGGAGAGGTCAGAAGCGGCG+AGG | - | chr5_3:764212-764231 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 763913 | 765505 | 763913 | ID=Msa0790120;Name=Msa0790120 |
| chr5_3 | mRNA | 763913 | 765505 | 763913 | ID=Msa0790120-mRNA-1;Parent=Msa0790120;Name=Msa0790120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|530 |
| chr5_3 | exon | 763913 | 765505 | 763913 | ID=Msa0790120-mRNA-1:exon:249;Parent=Msa0790120-mRNA-1 |
| chr5_3 | CDS | 763913 | 765505 | 763913 | ID=Msa0790120-mRNA-1:cds;Parent=Msa0790120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
