Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158000 | XP_013467257.1 | 95.900 | 561 | 23 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1025 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158000 | sp|Q9M8Z5|NSN1_ARATH | 65.116 | 602 | 179 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158000 | A0A072VI64 | 95.900 | 561 | 23 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1025 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0158000 | 0.912104 | 2.853913e-83 | -8.615850e-47 |
| Msa0066740 | Msa0158000 | 0.877688 | 5.141004e-69 | -8.615850e-47 |
| Msa0146770 | Msa0158000 | 0.801236 | 9.902305e-49 | -8.615850e-47 |
| Msa0158000 | Msa0455720 | 0.831887 | 1.293541e-55 | -8.615850e-47 |
| Msa0158000 | Msa0542090 | 0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0158000 | Msa0542130 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0158000 | Msa0554290 | 0.828416 | 9.099191e-55 | -8.615850e-47 |
| Msa0158000 | Msa0605000 | 0.837191 | 6.011569e-57 | -8.615850e-47 |
| Msa0158000 | Msa0638370 | 0.846098 | 2.688080e-59 | -8.615850e-47 |
| Msa0158000 | Msa0648780 | 0.831284 | 1.821598e-55 | -8.615850e-47 |
| Msa0158000 | Msa0685140 | 0.814805 | 1.277559e-51 | -8.615850e-47 |
| Msa0158000 | Msa0709730 | 0.803143 | 4.012577e-49 | -8.615850e-47 |
| Msa0158000 | Msa0719420 | 0.802224 | 6.210052e-49 | -8.615850e-47 |
| Msa0158000 | Msa0719610 | 0.814721 | 1.334017e-51 | -8.615850e-47 |
| Msa0158000 | Msa0763330 | 0.821603 | 3.698133e-53 | -8.615850e-47 |
| Msa0158000 | Msa0789680 | 0.801857 | 7.386569e-49 | -8.615850e-47 |
| Msa0158000 | Msa0790120 | 0.813425 | 2.576067e-51 | -8.615850e-47 |
| Msa0158000 | Msa0830040 | 0.813687 | 2.256598e-51 | -8.615850e-47 |
| Msa0158000 | Msa0859180 | 0.806688 | 7.284539e-50 | -8.615850e-47 |
| Msa0158000 | Msa0869130 | 0.808416 | 3.130106e-50 | -8.615850e-47 |
| Msa0158000 | Msa0879540 | 0.817811 | 2.716505e-52 | -8.615850e-47 |
| Msa0158000 | Msa0882580 | 0.843112 | 1.711806e-58 | -8.615850e-47 |
| Msa0158000 | Msa0925770 | 0.827398 | 1.599396e-54 | -8.615850e-47 |
| Msa0158000 | Msa0933300 | 0.819231 | 1.294745e-52 | -8.615850e-47 |
| Msa0158000 | Msa0945440 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0158000 | Msa0966210 | 0.804804 | 1.811544e-49 | -8.615850e-47 |
| Msa0158000 | Msa1027640 | 0.818065 | 2.381275e-52 | -8.615850e-47 |
| Msa0158000 | Msa1044480 | 0.814341 | 1.618655e-51 | -8.615850e-47 |
| Msa0158000 | Msa1066190 | 0.814267 | 1.680445e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158000 | MtrunA17_Chr1g0170031 | 95.900 | 561 | 23 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1025 |
| Msa0158000 | MtrunA17_Chr2g0317811 | 34.848 | 396 | 225 | 7 | 125 | 513 | 197 | 566 | 3.56e-60 | 210 |
| Msa0158000 | MtrunA17_Chr4g0042571 | 38.676 | 287 | 153 | 3 | 125 | 411 | 189 | 452 | 5.19e-58 | 204 |
| Msa0158000 | MtrunA17_Chr4g0025451 | 27.389 | 314 | 188 | 5 | 136 | 411 | 162 | 473 | 1.89e-27 | 117 |
| Msa0158000 | MtrunA17_Chr7g0259841 | 29.756 | 205 | 122 | 5 | 144 | 346 | 119 | 303 | 4.52e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0158000 | AT3G07050.1 | 65.116 | 602 | 179 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
| Msa0158000 | AT1G52980.1 | 38.235 | 306 | 166 | 3 | 125 | 430 | 199 | 481 | 9.65e-59 | 206 |
| Msa0158000 | AT2G27200.1 | 28.479 | 309 | 188 | 5 | 136 | 411 | 161 | 469 | 1.52e-30 | 126 |
| Msa0158000 | AT1G08410.1 | 27.900 | 319 | 193 | 5 | 136 | 417 | 161 | 479 | 2.68e-30 | 126 |
| Msa0158000 | AT4G02790.1 | 29.720 | 286 | 153 | 10 | 144 | 412 | 118 | 372 | 1.71e-15 | 79.0 |
Find 141 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTGCTCGCCTCAATTT+TGG | 0.124286 | 1_4:+26285282 | None:intergenic |
| TTCAATTCCTGTTCCTTAAA+AGG | 0.143573 | 1_4:+26290748 | None:intergenic |
| AAAGCAATACATGACGTTTA+TGG | 0.143814 | 1_4:+26289256 | None:intergenic |
| AATAGTGAAACTTCATTTAT+TGG | 0.146286 | 1_4:-26285928 | Msa0158000:CDS |
| CTACTGTCCCTTCAACAATT+TGG | 0.212143 | 1_4:-26284858 | Msa0158000:three_prime_UTR |
| TATGCTCTTTCACTTTCTTT+AGG | 0.222156 | 1_4:+26290857 | None:intergenic |
| CAAAGTTGATTACTTCAAAA+AGG | 0.273492 | 1_4:-26285196 | Msa0158000:CDS |
| TCTTGTTTCAGGCTCGTAAA+AGG | 0.281841 | 1_4:-26289625 | Msa0158000:intron |
| TACAGATTGTGGCTACTGTT+AGG | 0.291683 | 1_4:-26286246 | Msa0158000:CDS |
| GGTTCCCATGTCTGGTGTTC+AGG | 0.292524 | 1_4:-26285103 | Msa0158000:CDS |
| GGTTCTCCTTGATCCCTAAC+TGG | 0.296301 | 1_4:+26286009 | None:intergenic |
| CCAATACAGAAACAAAGTTT+TGG | 0.301259 | 1_4:-26284947 | Msa0158000:intron |
| AGAAGCCGTTTCAACTGAAT+TGG | 0.312062 | 1_4:+26289571 | None:intergenic |
| CTTCAAGTACCTGGGCTAAC+TGG | 0.316334 | 1_4:+26287551 | None:intergenic |
| TTTGAAGCACTTGTTAGTTC+CGG | 0.317744 | 1_4:-26284818 | Msa0158000:three_prime_UTR |
| TAGGGCCTTTGCCAGTGATT+TGG | 0.321863 | 1_4:-26289385 | Msa0158000:CDS |
| AACCCTTTCAAACCCTAAAA+TGG | 0.323396 | 1_4:-26291024 | Msa0158000:exon |
| ATAGTGAAACTTCATTTATT+GGG | 0.325794 | 1_4:-26285927 | Msa0158000:CDS |
| AAGCAATACATGACGTTTAT+GGG | 0.328299 | 1_4:+26289257 | None:intergenic |
| AGAACGTGCTCTTGCTGAAT+TGG | 0.338023 | 1_4:-26290707 | Msa0158000:CDS |
| TCCTTAAAAGGCCAATCATT+TGG | 0.343965 | 1_4:+26290760 | None:intergenic |
| TTGAAGCACTTGTTAGTTCC+GGG | 0.347457 | 1_4:-26284817 | Msa0158000:three_prime_UTR |
| GACATCAATCACTGTTGGTT+TGG | 0.362256 | 1_4:-26287798 | Msa0158000:CDS |
| CAATGATGAGGATGAATCTA+TGG | 0.362444 | 1_4:-26285397 | Msa0158000:CDS |
| CTTTGATGAGACAATGTTAG+AGG | 0.363951 | 1_4:-26285845 | Msa0158000:intron |
| GTTCAGGTTGATGCATGATT+TGG | 0.366255 | 1_4:-26285087 | Msa0158000:exon |
| AGAAAACTCTGAAACTATCT+TGG | 0.371936 | 1_4:+26285978 | None:intergenic |
| TTACAGAGAGTAAGAGTAAG+AGG | 0.372287 | 1_4:-26290906 | Msa0158000:intron |
| GTCGATGTCAGTGCTAGTGC+TGG | 0.375077 | 1_4:-26287716 | Msa0158000:CDS |
| GTTCTTCATGACTGGAATAT+AGG | 0.376417 | 1_4:-26286172 | Msa0158000:intron |
| CCTTGATGCCCGGGATCCCT+TGG | 0.391586 | 1_4:-26289325 | Msa0158000:CDS |
| TTGCCCTGGTGTTGTCATGC+TGG | 0.392424 | 1_4:-26287639 | Msa0158000:CDS |
| CTTTGCCAGTGATTTGGATC+AGG | 0.403021 | 1_4:-26289379 | Msa0158000:CDS |
| ACAGATTGTGGCTACTGTTA+GGG | 0.404092 | 1_4:-26286245 | Msa0158000:CDS |
| TCAATCACTGTTGGTTTGGT+TGG | 0.404100 | 1_4:-26287794 | Msa0158000:CDS |
| TTTCCATAGATAGTTCAGAT+AGG | 0.404505 | 1_4:-26289404 | Msa0158000:intron |
| CGCAACAGTAGGAACAGTTT+CGG | 0.415285 | 1_4:+26289538 | None:intergenic |
| AACACCGAGGTTCCCATGTC+TGG | 0.423048 | 1_4:-26285111 | Msa0158000:CDS |
| ACAAAACGAGAAGTTATATA+CGG | 0.449151 | 1_4:-26285322 | Msa0158000:CDS |
| AGAGGATGTTAGCAAGGAAA+AGG | 0.452580 | 1_4:-26285364 | Msa0158000:CDS |
| TACTAGAGGTCCTTGATGCC+CGG | 0.453164 | 1_4:-26289335 | Msa0158000:CDS |
| AGCCAGCTCATCTGATCCTA+TGG | 0.453591 | 1_4:-26285235 | Msa0158000:CDS |
| AACGAGTACCCAAGGGATCC+CGG | 0.456156 | 1_4:+26289316 | None:intergenic |
| TGCTTAATCCAAATTGTTGA+AGG | 0.456365 | 1_4:+26284850 | None:intergenic |
| GTCAAAGCAAGAGATTCGTT+TGG | 0.461640 | 1_4:-26287684 | Msa0158000:CDS |
| CTTGATGCCCGGGATCCCTT+GGG | 0.462440 | 1_4:-26289324 | Msa0158000:CDS |
| ATCCTGGTATTCCAAATGAT+TGG | 0.467524 | 1_4:-26290771 | Msa0158000:CDS |
| CAAGAATCGTTCTTCATGAC+TGG | 0.469526 | 1_4:-26286180 | Msa0158000:CDS |
| GGCCAATCATTTGGAATACC+AGG | 0.469715 | 1_4:+26290769 | None:intergenic |
| ACTGTTGCGAAGACTAATAA+AGG | 0.470225 | 1_4:-26289524 | Msa0158000:intron |
| TCATTGTCATCAACATTCTC+AGG | 0.473233 | 1_4:+26285414 | None:intergenic |
| TCAATTAAGTGGTAAGAAGA+AGG | 0.475631 | 1_4:-26290803 | Msa0158000:CDS |
| AGAAAGAAGCTCGTAAAGAA+AGG | 0.477638 | 1_4:-26290678 | Msa0158000:CDS |
| TTCCATAGATAGTTCAGATA+GGG | 0.481540 | 1_4:-26289403 | Msa0158000:intron |
| AGACTACTCTTACCAACATT+GGG | 0.485202 | 1_4:+26287767 | None:intergenic |
| CAGGCTCGTAAAAGGAAGGC+GGG | 0.492005 | 1_4:-26289617 | Msa0158000:CDS |
| GTTCTCCTTGATCCCTAACT+GGG | 0.492076 | 1_4:+26286010 | None:intergenic |
| TTTGGATAGGTCAAGAATTG+AGG | 0.492412 | 1_4:-26284929 | Msa0158000:three_prime_UTR |
| AAGACTACTCTTACCAACAT+TGG | 0.493721 | 1_4:+26287766 | None:intergenic |
| TCATCAACTGAATCAAAACT+TGG | 0.498766 | 1_4:+26286274 | None:intergenic |
| AAGATGAGAGGGCAACTTGA+AGG | 0.504734 | 1_4:+26285865 | None:intergenic |
| TAACTCCAATTCAGTTGAAA+CGG | 0.507020 | 1_4:-26289576 | Msa0158000:CDS |
| ATCTATGGAAAGTGATAAAG+AGG | 0.508499 | 1_4:-26285382 | Msa0158000:CDS |
| AAGAAGGTTGAGAAAGATCC+TGG | 0.515836 | 1_4:-26290787 | Msa0158000:CDS |
| CCAAGGGATCCCGGGCATCA+AGG | 0.518140 | 1_4:+26289325 | None:intergenic |
| ATCAACCTGAACACCAGACA+TGG | 0.518606 | 1_4:+26285098 | None:intergenic |
| TGATAAAGAGGATGTTAGCA+AGG | 0.518807 | 1_4:-26285370 | Msa0158000:CDS |
| TTTAGGGTTTGAAAGGGTTG+CGG | 0.524075 | 1_4:+26291028 | None:intergenic |
| GGATGACAAAGCAGTTAAGT+TGG | 0.529915 | 1_4:-26285454 | Msa0158000:CDS |
| ATCCATAGGATCAGATGAGC+TGG | 0.532677 | 1_4:+26285233 | None:intergenic |
| GAAAGAAGCTCGTAAAGAAA+GGG | 0.534276 | 1_4:-26290677 | Msa0158000:intron |
| AGAGATATCAGCACCCTAGC+GGG | 0.534816 | 1_4:+26286307 | None:intergenic |
| TTCTCAAGCTCTGTCCCGCT+AGG | 0.535798 | 1_4:-26286321 | Msa0158000:CDS |
| TTGAATTCTAAACACTGTAA+AGG | 0.536165 | 1_4:+26284729 | None:intergenic |
| ACTAGAGGTCCTTGATGCCC+GGG | 0.544113 | 1_4:-26289334 | Msa0158000:CDS |
| CTCAAGACATCAATCACTGT+TGG | 0.544568 | 1_4:-26287803 | Msa0158000:CDS |
| GAAACTATCTTGGCCTCTGA+AGG | 0.545238 | 1_4:+26285988 | None:intergenic |
| TGTTAGGGGCAAGCTCAAGA+AGG | 0.553084 | 1_4:-26286230 | Msa0158000:CDS |
| TGATGACTTCCTACAGATTG+TGG | 0.555283 | 1_4:-26286257 | Msa0158000:CDS |
| GCTTAATCCAAATTGTTGAA+GGG | 0.556503 | 1_4:+26284851 | None:intergenic |
| CGAGAAGTTATATACGGCAG+AGG | 0.564504 | 1_4:-26285316 | Msa0158000:CDS |
| TTGGTTGGACTGCCCAATGT+TGG | 0.564722 | 1_4:-26287779 | Msa0158000:CDS |
| CTCGAGAGTCAGTTGAGAAG+TGG | 0.566914 | 1_4:-26289127 | Msa0158000:CDS |
| GTTAAGTTGCTGGATTGCCC+TGG | 0.568716 | 1_4:-26287653 | Msa0158000:CDS |
| TGCACTTGAAAGCGACAGTA+GGG | 0.569257 | 1_4:+26289081 | None:intergenic |
| TATCACGCATGTGGTCAAGA+TGG | 0.570690 | 1_4:-26284686 | Msa0158000:three_prime_UTR |
| ACGAGTACCCAAGGGATCCC+GGG | 0.570844 | 1_4:+26289317 | None:intergenic |
| CTGCACTTGAAAGCGACAGT+AGG | 0.571229 | 1_4:+26289080 | None:intergenic |
| TCGATGTCAGTGCTAGTGCT+GGG | 0.574430 | 1_4:-26287715 | Msa0158000:CDS |
| TTGCAATTAAGTGATTGTCT+CGG | 0.574961 | 1_4:-26288999 | Msa0158000:CDS |
| CTGATCCAAATCACTGGCAA+AGG | 0.574966 | 1_4:+26289380 | None:intergenic |
| TTATTAGTCTTCGCAACAGT+AGG | 0.576810 | 1_4:+26289527 | None:intergenic |
| GAGTCCAGCATGACAACACC+AGG | 0.578166 | 1_4:+26287635 | None:intergenic |
| AAGGAAGGCGGGGTTGCCAG+TGG | 0.578828 | 1_4:-26289606 | Msa0158000:CDS |
| TAAAGAGTTTAACATTGATG+AGG | 0.580829 | 1_4:-26285956 | Msa0158000:CDS |
| AGGACACGATGGATGCTGAC+GGG | 0.582177 | 1_4:-26285176 | Msa0158000:CDS |
| ACATGATCTAACTCAACAGT+GGG | 0.584528 | 1_4:+26285895 | None:intergenic |
| GTGCTAGTGCTGGGTCGACA+AGG | 0.591514 | 1_4:-26287706 | Msa0158000:CDS |
| AACACCAGACATGGGAACCT+CGG | 0.592864 | 1_4:+26285107 | None:intergenic |
| GTTTCAGGCTCGTAAAAGGA+AGG | 0.594629 | 1_4:-26289621 | Msa0158000:intron |
| TCTCAAGCTCTGTCCCGCTA+GGG | 0.595120 | 1_4:-26286320 | Msa0158000:CDS |
| GTTAACACAACGAGTACCCA+AGG | 0.598523 | 1_4:+26289308 | None:intergenic |
| AAGTCATAATCACCATCCAT+AGG | 0.599349 | 1_4:+26285219 | None:intergenic |
| TGCGCACACATAAATTTAGA+CGG | 0.599618 | 1_4:-26285063 | Msa0158000:three_prime_UTR |
| AATAACCTGATCCAAATCAC+TGG | 0.599929 | 1_4:+26289374 | None:intergenic |
| AAGTTGGCAAAACAAGATGA+AGG | 0.603504 | 1_4:-26285438 | Msa0158000:CDS |
| TTGTCTCATCAAAGATGAGA+GGG | 0.604223 | 1_4:+26285854 | None:intergenic |
| CAGATTGTGGCTACTGTTAG+GGG | 0.604493 | 1_4:-26286244 | Msa0158000:CDS |
| TACAGAGAGTAAGAGTAAGA+GGG | 0.609076 | 1_4:-26290905 | Msa0158000:intron |
| CACTTCTCAACTGACTCTCG+AGG | 0.609711 | 1_4:+26289128 | None:intergenic |
| TTGGAGTTATCATCATCCAC+TGG | 0.612027 | 1_4:+26289590 | None:intergenic |
| GTATACTTAATCCAAAATTG+AGG | 0.617540 | 1_4:-26285293 | Msa0158000:CDS |
| AGCTCATCTGATCCTATGGA+TGG | 0.618484 | 1_4:-26285231 | Msa0158000:CDS |
| TAACAGTAGCCACAATCTGT+AGG | 0.620654 | 1_4:+26286248 | None:intergenic |
| GTTAGGGGCAAGCTCAAGAA+GGG | 0.621289 | 1_4:-26286229 | Msa0158000:CDS |
| TTAGCTGATCCAGTTAGCCC+AGG | 0.623020 | 1_4:-26287560 | Msa0158000:intron |
| GAGAAGTTATATACGGCAGA+GGG | 0.626882 | 1_4:-26285315 | Msa0158000:CDS |
| ATTGTCTCATCAAAGATGAG+AGG | 0.635020 | 1_4:+26285853 | None:intergenic |
| AAGGACACGATGGATGCTGA+CGG | 0.635872 | 1_4:-26285177 | Msa0158000:CDS |
| TCTCCTTGATCCCTAACTGG+GGG | 0.637476 | 1_4:+26286012 | None:intergenic |
| TAGCACTGACATCGACAGCA+TGG | 0.638654 | 1_4:+26287723 | None:intergenic |
| CAGTAGGGAATTCTTCTCGA+AGG | 0.646359 | 1_4:+26289096 | None:intergenic |
| TTAGTAACATATCACGCATG+TGG | 0.649553 | 1_4:-26284695 | Msa0158000:three_prime_UTR |
| AGGGGCAAGCTCAAGAAGGG+TGG | 0.649554 | 1_4:-26286226 | Msa0158000:CDS |
| TCAGGCTCGTAAAAGGAAGG+CGG | 0.649927 | 1_4:-26289618 | Msa0158000:intron |
| GAATTATGCAAGAAGCGACA+AGG | 0.656552 | 1_4:-26288949 | Msa0158000:intron |
| TCAACCTGAACACCAGACAT+GGG | 0.657743 | 1_4:+26285099 | None:intergenic |
| GGATCAAGGAGAACCTTCAG+AGG | 0.661640 | 1_4:-26286001 | Msa0158000:CDS |
| AACATGATCTAACTCAACAG+TGG | 0.662506 | 1_4:+26285894 | None:intergenic |
| AGAGTCTGATGTCATACTAG+AGG | 0.662679 | 1_4:-26289349 | Msa0158000:CDS |
| TTCTCCTTGATCCCTAACTG+GGG | 0.665827 | 1_4:+26286011 | None:intergenic |
| ATGGATGCTGACGGGAGTGA+CGG | 0.668896 | 1_4:-26285168 | Msa0158000:CDS |
| ACTTCTCAACTGACTCTCGA+GGG | 0.678144 | 1_4:+26289129 | None:intergenic |
| AGGCTCGTAAAAGGAAGGCG+GGG | 0.684944 | 1_4:-26289616 | Msa0158000:CDS |
| TTAACACAACGAGTACCCAA+GGG | 0.685445 | 1_4:+26289309 | None:intergenic |
| GATGCTGACGGGAGTGACGG+TGG | 0.688567 | 1_4:-26285165 | Msa0158000:CDS |
| GACGGTGGTGACGACAATGA+TGG | 0.707599 | 1_4:-26285150 | Msa0158000:CDS |
| GAATGTTGATGACAATGATG+AGG | 0.708173 | 1_4:-26285409 | Msa0158000:CDS |
| AAGAGATATCAGCACCCTAG+CGG | 0.715395 | 1_4:+26286306 | None:intergenic |
| AGTCCAGCATGACAACACCA+GGG | 0.773850 | 1_4:+26287636 | None:intergenic |
| TGATGAACAAGTCAACACCG+AGG | 0.841599 | 1_4:-26285124 | Msa0158000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACCTTATTATTATTATTA+GGG | - | chr1_4:26287080-26287099 | Msa0158000:intron | 10.0% |
| !! | AAATAAGAGAATTAATTAAT+GGG | + | chr1_4:26288202-26288221 | None:intergenic | 10.0% |
| !! | TAAATAAGAGAATTAATTAA+TGG | + | chr1_4:26288203-26288222 | None:intergenic | 10.0% |
| !!! | ATTAATTAATTCTCTTATTT+AGG | - | chr1_4:26288202-26288221 | Msa0158000:intron | 10.0% |
| !!! | TTTAGTTTAAACTTTAAAAT+TGG | - | chr1_4:26288626-26288645 | Msa0158000:intron | 10.0% |
| !!! | ATTTCAAAATTAAGATTTTA+AGG | + | chr1_4:26289312-26289331 | None:intergenic | 10.0% |
| !! | AAATATGTTAAAACATTATA+AGG | - | chr1_4:26289921-26289940 | Msa0158000:intron | 10.0% |
| !! | ATTTATTGTTTGAAAATTGA+TGG | - | chr1_4:26285113-26285132 | Msa0158000:CDS | 15.0% |
| !! | TTTATTGTTTGAAAATTGAT+GGG | - | chr1_4:26285114-26285133 | Msa0158000:CDS | 15.0% |
| !!! | AAAAATTAAATTTTGTGAGA+TGG | - | chr1_4:26285148-26285167 | Msa0158000:CDS | 15.0% |
| !!! | AAAATTAAATTTTGTGAGAT+GGG | - | chr1_4:26285149-26285168 | Msa0158000:CDS | 15.0% |
| !!! | AAGTTCATTTTTTTTTTTGA+AGG | + | chr1_4:26285589-26285608 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAATGAACTTA+TGG | - | chr1_4:26285590-26285609 | Msa0158000:intron | 15.0% |
| !! | ACATAAAAAATAAAAAGAGA+GGG | + | chr1_4:26286826-26286845 | None:intergenic | 15.0% |
| !! | AACATAAAAAATAAAAAGAG+AGG | + | chr1_4:26286827-26286846 | None:intergenic | 15.0% |
| !! | GAAACCTTATTATTATTATT+AGG | - | chr1_4:26287079-26287098 | Msa0158000:intron | 15.0% |
| !! | TTTCCCTAATAATAATAATA+AGG | + | chr1_4:26287086-26287105 | None:intergenic | 15.0% |
| !! | AATAAGAGAATTAATTAATG+GGG | + | chr1_4:26288201-26288220 | None:intergenic | 15.0% |
| !!! | TAATACTGATAATTGTTTTT+AGG | - | chr1_4:26288377-26288396 | Msa0158000:intron | 15.0% |
| !!! | GCAATTTTAATTAAATTTTG+TGG | - | chr1_4:26288417-26288436 | Msa0158000:intron | 15.0% |
| !! | AGATTAAAAATTACAATGAA+AGG | + | chr1_4:26290154-26290173 | None:intergenic | 15.0% |
| !! | AAATTGAAAAAGTGATGAAA+GGG | + | chr1_4:26284742-26284761 | None:intergenic | 20.0% |
| !!! | ATTTTGTACTTTTTCTTCAA+TGG | + | chr1_4:26284838-26284857 | None:intergenic | 20.0% |
| !!! | TAGTTGAAGTATATTTTATG+AGG | - | chr1_4:26285303-26285322 | Msa0158000:CDS | 20.0% |
| !!! | TATTTTATGAGGATTAGATT+TGG | - | chr1_4:26285314-26285333 | Msa0158000:CDS | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | - | chr1_4:26285554-26285573 | Msa0158000:intron | 20.0% |
| !! | GATTAATTAACTAGAACTAT+TGG | - | chr1_4:26285866-26285885 | Msa0158000:CDS | 20.0% |
| !! | TTGTGTTAACATAGAAAAAA+GGG | - | chr1_4:26286420-26286439 | Msa0158000:intron | 20.0% |
| !!! | GTATTGCTTTTGAATAAAAT+TGG | - | chr1_4:26286472-26286491 | Msa0158000:intron | 20.0% |
| !! | TTGTTTGTATAATTAAAGTG+AGG | - | chr1_4:26286932-26286951 | Msa0158000:intron | 20.0% |
| !! | ATAATCACTAAAATGTAGAA+TGG | + | chr1_4:26287797-26287816 | None:intergenic | 20.0% |
| !! | ACTTCTAGTATTACAATTTA+TGG | - | chr1_4:26287845-26287864 | Msa0158000:intron | 20.0% |
| !! | AGACAAAACCAAAATAATTA+CGG | + | chr1_4:26287886-26287905 | None:intergenic | 20.0% |
| !! | ATAAGAGAATTAATTAATGG+GGG | + | chr1_4:26288200-26288219 | None:intergenic | 20.0% |
| !! | ATAATTTCTGCATAAGAAAA+TGG | + | chr1_4:26288293-26288312 | None:intergenic | 20.0% |
| !!! | TAAAAGTACAGATAAAAACT+AGG | + | chr1_4:26288921-26288940 | None:intergenic | 20.0% |
| !! | TAATTACTAAAGAGAACAAT+AGG | + | chr1_4:26289083-26289102 | None:intergenic | 20.0% |
| !!! | ATTTTTCTTACTTTCACTTT+TGG | + | chr1_4:26289640-26289659 | None:intergenic | 20.0% |
| !! | AATAGTGAAACTTCATTTAT+TGG | - | chr1_4:26289787-26289806 | Msa0158000:intron | 20.0% |
| !! | ATAGTGAAACTTCATTTATT+GGG | - | chr1_4:26289788-26289807 | Msa0158000:intron | 20.0% |
| !!! | TTAATATTCGATTTGATTGA+TGG | - | chr1_4:26290026-26290045 | Msa0158000:intron | 20.0% |
| !!! | TAATATTCGATTTGATTGAT+GGG | - | chr1_4:26290027-26290046 | Msa0158000:intron | 20.0% |
| ! | GAAATTGAAAAAGTGATGAA+AGG | + | chr1_4:26284743-26284762 | None:intergenic | 25.0% |
| ! | NNNNNNNATTTGTCCCTGTT+TGG | - | chr1_4:26285437-26285456 | Msa0158000:CDS | 25.0% |
| ! | CTAGATAAGTCAATCTAAAT+AGG | - | chr1_4:26285658-26285677 | Msa0158000:intron | 25.0% |
| ! | GTTGTGTTAACATAGAAAAA+AGG | - | chr1_4:26286419-26286438 | Msa0158000:intron | 25.0% |
| ! | TGAAAAAAATATTCCCAGAA+GGG | + | chr1_4:26286530-26286549 | None:intergenic | 25.0% |
| ! | ATGAAAAAAATATTCCCAGA+AGG | + | chr1_4:26286531-26286550 | None:intergenic | 25.0% |
| ! | TGCAAGTGTTCTTATAAATA+TGG | - | chr1_4:26286864-26286883 | Msa0158000:intron | 25.0% |
| !! | GGATGTTATCAATACTATTT+TGG | - | chr1_4:26287038-26287057 | Msa0158000:intron | 25.0% |
| !!! | TCTATTTTTAACTCCTTAAC+CGG | - | chr1_4:26287233-26287252 | Msa0158000:intron | 25.0% |
| ! | ATAATAAGAGTTATGCTAAC+CGG | + | chr1_4:26287272-26287291 | None:intergenic | 25.0% |
| ! | ATATCTTGTAAAATTGACGA+GGG | + | chr1_4:26287457-26287476 | None:intergenic | 25.0% |
| ! | TATATCTTGTAAAATTGACG+AGG | + | chr1_4:26287458-26287477 | None:intergenic | 25.0% |
| ! | TGCATAAAGAAACAAACAAA+TGG | + | chr1_4:26287626-26287645 | None:intergenic | 25.0% |
| !! | CTATTTTGCCGTAATTATTT+TGG | - | chr1_4:26287875-26287894 | Msa0158000:intron | 25.0% |
| !! | TCTTATTTAGGTCTTCATAT+TGG | - | chr1_4:26288214-26288233 | Msa0158000:intron | 25.0% |
| ! | AAAACATGTATAGAATCTCA+AGG | + | chr1_4:26288541-26288560 | None:intergenic | 25.0% |
| ! | GATAATAGGTTACTAGTATT+GGG | + | chr1_4:26288574-26288593 | None:intergenic | 25.0% |
| ! | AGATAATAGGTTACTAGTAT+TGG | + | chr1_4:26288575-26288594 | None:intergenic | 25.0% |
| ! | ACTCAAAAGGTAAAGATAAT+AGG | + | chr1_4:26288588-26288607 | None:intergenic | 25.0% |
| ! | CAATATATTTAGCACTCAAA+AGG | + | chr1_4:26288601-26288620 | None:intergenic | 25.0% |
| ! | GGTCTTTATTCTTTAATCAA+CGG | + | chr1_4:26288858-26288877 | None:intergenic | 25.0% |
| ! | TCATAAATCAAATTTCAACC+AGG | + | chr1_4:26288894-26288913 | None:intergenic | 25.0% |
| !!! | ATACATGTTTCTTTTGAAGT+TGG | - | chr1_4:26289589-26289608 | Msa0158000:CDS | 25.0% |
| !!! | TTCTTTTGAAGTTGGAAATT+AGG | - | chr1_4:26289597-26289616 | Msa0158000:CDS | 25.0% |
| ! | ATTTATAATTGCACTGTTTC+AGG | - | chr1_4:26289658-26289677 | Msa0158000:intron | 25.0% |
| ! | TAAAGAGTTTAACATTGATG+AGG | - | chr1_4:26289759-26289778 | Msa0158000:intron | 25.0% |
| !! | CAATCAAAATCTCAGAATTT+TGG | + | chr1_4:26290085-26290104 | None:intergenic | 25.0% |
| !!! | CAAAATTCTGAGATTTTGAT+TGG | - | chr1_4:26290083-26290102 | Msa0158000:intron | 25.0% |
| ! | CTGGAAAAACAAATTGAAAA+GGG | + | chr1_4:26290242-26290261 | None:intergenic | 25.0% |
| ! | ACAAAACGAGAAGTTATATA+CGG | - | chr1_4:26290393-26290412 | Msa0158000:intron | 25.0% |
| ! | GTATACTTAATCCAAAATTG+AGG | - | chr1_4:26290422-26290441 | Msa0158000:intron | 25.0% |
| !! | CAAAGTTGATTACTTCAAAA+AGG | - | chr1_4:26290519-26290538 | Msa0158000:intron | 25.0% |
| ! | TTGAATTCTAAACACTGTAA+AGG | + | chr1_4:26290989-26291008 | None:intergenic | 25.0% |
| TATGCTCTTTCACTTTCTTT+AGG | + | chr1_4:26284861-26284880 | None:intergenic | 30.0% | |
| !!! | TTGAAGCTTTTTAGCTTCTT+TGG | + | chr1_4:26284896-26284915 | None:intergenic | 30.0% |
| GCTAAAAAGCTTCAATTAAG+TGG | - | chr1_4:26284901-26284920 | Msa0158000:three_prime_UTR | 30.0% | |
| TCAATTAAGTGGTAAGAAGA+AGG | - | chr1_4:26284912-26284931 | Msa0158000:three_prime_UTR | 30.0% | |
| TTCAATTCCTGTTCCTTAAA+AGG | + | chr1_4:26284970-26284989 | None:intergenic | 30.0% | |
| TTAACCTCATTATCCAAACA+GGG | + | chr1_4:26285453-26285472 | None:intergenic | 30.0% | |
| ATTAACCTCATTATCCAAAC+AGG | + | chr1_4:26285454-26285473 | None:intergenic | 30.0% | |
| TTGGATAATGAGGTTAATTG+AGG | - | chr1_4:26285456-26285475 | Msa0158000:CDS | 30.0% | |
| TGGATAATGAGGTTAATTGA+GGG | - | chr1_4:26285457-26285476 | Msa0158000:intron | 30.0% | |
| ! | CAGCATTTGTGAAACTTTTT+AGG | + | chr1_4:26285632-26285651 | None:intergenic | 30.0% |
| ! | TTGAGATTACAAGTTTTACC+GGG | + | chr1_4:26285728-26285747 | None:intergenic | 30.0% |
| ! | CTTGAGATTACAAGTTTTAC+CGG | + | chr1_4:26285729-26285748 | None:intergenic | 30.0% |
| TATGTTGTGTTATGACTGTA+TGG | - | chr1_4:26285997-26286016 | Msa0158000:CDS | 30.0% | |
| TAACTCCAATTCAGTTGAAA+CGG | - | chr1_4:26286139-26286158 | Msa0158000:intron | 30.0% | |
| TTTCCATAGATAGTTCAGAT+AGG | - | chr1_4:26286311-26286330 | Msa0158000:CDS | 30.0% | |
| TTCCATAGATAGTTCAGATA+GGG | - | chr1_4:26286312-26286331 | Msa0158000:CDS | 30.0% | |
| TTAACATAGAAAAAAGGGTG+AGG | - | chr1_4:26286425-26286444 | Msa0158000:intron | 30.0% | |
| AAGCAATACATGACGTTTAT+GGG | + | chr1_4:26286461-26286480 | None:intergenic | 30.0% | |
| AAAGCAATACATGACGTTTA+TGG | + | chr1_4:26286462-26286481 | None:intergenic | 30.0% | |
| AACAGCAAAAATCAAACCTA+GGG | - | chr1_4:26286663-26286682 | Msa0158000:intron | 30.0% | |
| !!! | TGATTTTTTTAGATCTCCCT+AGG | + | chr1_4:26286682-26286701 | None:intergenic | 30.0% |
| TTGCAATTAAGTGATTGTCT+CGG | - | chr1_4:26286716-26286735 | Msa0158000:intron | 30.0% | |
| !! | ATCAGAGATGTTACTTTATG+TGG | - | chr1_4:26286983-26287002 | Msa0158000:intron | 30.0% |
| !! | TCAGAGATGTTACTTTATGT+GGG | - | chr1_4:26286984-26287003 | Msa0158000:intron | 30.0% |
| AGGAGAAACATGAATGATAA+GGG | + | chr1_4:26287421-26287440 | None:intergenic | 30.0% | |
| AAGGAGAAACATGAATGATA+AGG | + | chr1_4:26287422-26287441 | None:intergenic | 30.0% | |
| TCAGTGTTATGTAATTTCTG+TGG | - | chr1_4:26287495-26287514 | Msa0158000:intron | 30.0% | |
| TCTTTATGCATGCATGAATT+TGG | - | chr1_4:26287636-26287655 | Msa0158000:CDS | 30.0% | |
| AATTTGGCACTTGTATGTTT+GGG | - | chr1_4:26287652-26287671 | Msa0158000:CDS | 30.0% | |
| !! | GTATAACATGAAAAGTATCG+TGG | + | chr1_4:26287689-26287708 | None:intergenic | 30.0% |
| ! | CGATACTTTTCATGTTATAC+TGG | - | chr1_4:26287689-26287708 | Msa0158000:CDS | 30.0% |
| GAAGTGAAGTTACAAGAATT+GGG | + | chr1_4:26287830-26287849 | None:intergenic | 30.0% | |
| AGAAGTGAAGTTACAAGAAT+TGG | + | chr1_4:26287831-26287850 | None:intergenic | 30.0% | |
| TTTCTGCATAAGAAAATGGA+GGG | + | chr1_4:26288289-26288308 | None:intergenic | 30.0% | |
| ATTTCTGCATAAGAAAATGG+AGG | + | chr1_4:26288290-26288309 | None:intergenic | 30.0% | |
| GTATAGAATCTCAAGGTAAA+GGG | + | chr1_4:26288534-26288553 | None:intergenic | 30.0% | |
| TGTATAGAATCTCAAGGTAA+AGG | + | chr1_4:26288535-26288554 | None:intergenic | 30.0% | |
| TCTTTCAAATAAGAACTAGG+TGG | + | chr1_4:26288762-26288781 | None:intergenic | 30.0% | |
| ! | ACCTAGTTCTTATTTGAAAG+AGG | - | chr1_4:26288761-26288780 | Msa0158000:intron | 30.0% |
| ACCTCTTTCAAATAAGAACT+AGG | + | chr1_4:26288765-26288784 | None:intergenic | 30.0% | |
| AAAGAGGTTACATGAAGTTT+GGG | - | chr1_4:26288777-26288796 | Msa0158000:intron | 30.0% | |
| AAAGATCCATCGATATAGTA+AGG | - | chr1_4:26288808-26288827 | Msa0158000:intron | 30.0% | |
| AAGATCCATCGATATAGTAA+GGG | - | chr1_4:26288809-26288828 | Msa0158000:intron | 30.0% | |
| ! | CTATTACACTATTTTCTCTC+TGG | - | chr1_4:26288942-26288961 | Msa0158000:intron | 30.0% |
| CAATTAACTAACTAGAAAGC+AGG | + | chr1_4:26289172-26289191 | None:intergenic | 30.0% | |
| ! | GGAAGTCTAATCCTTTTTAT+TGG | - | chr1_4:26289353-26289372 | Msa0158000:CDS | 30.0% |
| TCATCAACTGAATCAAAACT+TGG | + | chr1_4:26289444-26289463 | None:intergenic | 30.0% | |
| !! | TCTTACTTTCACTTTTGGAA+AGG | + | chr1_4:26289635-26289654 | None:intergenic | 30.0% |
| !! | AGAAAACTCTGAAACTATCT+TGG | + | chr1_4:26289740-26289759 | None:intergenic | 30.0% |
| ! | ACATTATAAGGAAAGTGTGT+TGG | - | chr1_4:26289933-26289952 | Msa0158000:intron | 30.0% |
| ! | CAAAATCTCAGAATTTTGGA+GGG | + | chr1_4:26290081-26290100 | None:intergenic | 30.0% |
| ! | TCAAAATCTCAGAATTTTGG+AGG | + | chr1_4:26290082-26290101 | None:intergenic | 30.0% |
| AACACACTACAAACTGAATA+GGG | + | chr1_4:26290195-26290214 | None:intergenic | 30.0% | |
| TAACACACTACAAACTGAAT+AGG | + | chr1_4:26290196-26290215 | None:intergenic | 30.0% | |
| CCTGGAAAAACAAATTGAAA+AGG | + | chr1_4:26290243-26290262 | None:intergenic | 30.0% | |
| !! | CCTTTTCAATTTGTTTTTCC+AGG | - | chr1_4:26290240-26290259 | Msa0158000:intron | 30.0% |
| ATCTATGGAAAGTGATAAAG+AGG | - | chr1_4:26290333-26290352 | Msa0158000:intron | 30.0% | |
| AGAGAAGAAGAAAAAGAAGA+AGG | - | chr1_4:26290450-26290469 | Msa0158000:intron | 30.0% | |
| CATAAATTTAGACGGATGTA+AGG | - | chr1_4:26290660-26290679 | Msa0158000:intron | 30.0% | |
| !! | CCAAAACTTTGTTTCTGTAT+TGG | + | chr1_4:26290771-26290790 | None:intergenic | 30.0% |
| ! | CCAATACAGAAACAAAGTTT+TGG | - | chr1_4:26290768-26290787 | Msa0158000:CDS | 30.0% |
| !!! | ACAGAAACAAAGTTTTGGAT+AGG | - | chr1_4:26290773-26290792 | Msa0158000:CDS | 30.0% |
| GAACTCAGTCAAAAATATCT+GGG | + | chr1_4:26290836-26290855 | None:intergenic | 30.0% | |
| TGAACTCAGTCAAAAATATC+TGG | + | chr1_4:26290837-26290856 | None:intergenic | 30.0% | |
| GCTTAATCCAAATTGTTGAA+GGG | + | chr1_4:26290867-26290886 | None:intergenic | 30.0% | |
| TGCTTAATCCAAATTGTTGA+AGG | + | chr1_4:26290868-26290887 | None:intergenic | 30.0% | |
| GAAATGCCAAAAATGCTTTA+AGG | - | chr1_4:26290920-26290939 | Msa0158000:intron | 30.0% | |
| AACCCTTTCAAACCCTAAAA+TGG | - | chr1_4:26284691-26284710 | Msa0158000:three_prime_UTR | 35.0% | |
| !!! | CACCATTTTAGGGTTTGAAA+GGG | + | chr1_4:26284696-26284715 | None:intergenic | 35.0% |
| !!! | TCACCATTTTAGGGTTTGAA+AGG | + | chr1_4:26284697-26284716 | None:intergenic | 35.0% |
| ! | TGCTTCTCTTCACCATTTTA+GGG | + | chr1_4:26284706-26284725 | None:intergenic | 35.0% |
| ! | TTGCTTCTCTTCACCATTTT+AGG | + | chr1_4:26284707-26284726 | None:intergenic | 35.0% |
| TTACAGAGAGTAAGAGTAAG+AGG | - | chr1_4:26284809-26284828 | Msa0158000:three_prime_UTR | 35.0% | |
| TACAGAGAGTAAGAGTAAGA+GGG | - | chr1_4:26284810-26284829 | Msa0158000:three_prime_UTR | 35.0% | |
| ATCCTGGTATTCCAAATGAT+TGG | - | chr1_4:26284944-26284963 | Msa0158000:intron | 35.0% | |
| !!! | TCCAAATGATTGGCCTTTTA+AGG | - | chr1_4:26284954-26284973 | Msa0158000:intron | 35.0% |
| TCCTTAAAAGGCCAATCATT+TGG | + | chr1_4:26284958-26284977 | None:intergenic | 35.0% | |
| AGAAAGAAGCTCGTAAAGAA+AGG | - | chr1_4:26285037-26285056 | Msa0158000:intron | 35.0% | |
| GAAAGAAGCTCGTAAAGAAA+GGG | - | chr1_4:26285038-26285057 | Msa0158000:intron | 35.0% | |
| CAGCTTACATAAGCACTTAT+AGG | + | chr1_4:26285503-26285522 | None:intergenic | 35.0% | |
| !! | TTTGTGAAACTTTTTAGGCG+AGG | + | chr1_4:26285627-26285646 | None:intergenic | 35.0% |
| CGGTAAAACTTGTAATCTCA+AGG | - | chr1_4:26285727-26285746 | Msa0158000:intron | 35.0% | |
| GAACTAAGCTCAAGTTACTT+TGG | - | chr1_4:26285749-26285768 | Msa0158000:intron | 35.0% | |
| ! | TCATGTCTAACTCTTGTTTC+AGG | - | chr1_4:26286079-26286098 | Msa0158000:intron | 35.0% |
| !! | TTATTAGTCTTCGCAACAGT+AGG | + | chr1_4:26286191-26286210 | None:intergenic | 35.0% |
| ACTGTTGCGAAGACTAATAA+AGG | - | chr1_4:26286191-26286210 | Msa0158000:CDS | 35.0% | |
| AATAACCTGATCCAAATCAC+TGG | + | chr1_4:26286344-26286363 | None:intergenic | 35.0% | |
| AATATTCCCAGAAGGGAAAA+GGG | + | chr1_4:26286523-26286542 | None:intergenic | 35.0% | |
| AAATATTCCCAGAAGGGAAA+AGG | + | chr1_4:26286524-26286543 | None:intergenic | 35.0% | |
| CAACAGCAAAAATCAAACCT+AGG | - | chr1_4:26286662-26286681 | Msa0158000:intron | 35.0% | |
| CTGGGTTAAGGAGTTATAAA+AGG | - | chr1_4:26287129-26287148 | Msa0158000:intron | 35.0% | |
| GAATTTGGCACTTGTATGTT+TGG | - | chr1_4:26287651-26287670 | Msa0158000:CDS | 35.0% | |
| AGACTACTCTTACCAACATT+GGG | + | chr1_4:26287951-26287970 | None:intergenic | 35.0% | |
| AAGACTACTCTTACCAACAT+TGG | + | chr1_4:26287952-26287971 | None:intergenic | 35.0% | |
| ! | GGACAAAAATGTTAAGTTGC+TGG | - | chr1_4:26288052-26288071 | Msa0158000:intron | 35.0% |
| GAGAATTAATTAATGGGGGA+AGG | + | chr1_4:26288196-26288215 | None:intergenic | 35.0% | |
| ! | TGGAGTAATGCTACTTGAAA+TGG | - | chr1_4:26288234-26288253 | Msa0158000:intron | 35.0% |
| ! | GTAATGCTACTTGAAATGGA+TGG | - | chr1_4:26288238-26288257 | Msa0158000:intron | 35.0% |
| CAGTATTAGAGTCTAGAAGA+GGG | + | chr1_4:26288365-26288384 | None:intergenic | 35.0% | |
| TCAGTATTAGAGTCTAGAAG+AGG | + | chr1_4:26288366-26288385 | None:intergenic | 35.0% | |
| GTTATCATGATCTCAGTTGA+AGG | - | chr1_4:26288500-26288519 | Msa0158000:intron | 35.0% | |
| ! | ATAGGTTACTAGTATTGGGA+GGG | + | chr1_4:26288570-26288589 | None:intergenic | 35.0% |
| ! | AATAGGTTACTAGTATTGGG+AGG | + | chr1_4:26288571-26288590 | None:intergenic | 35.0% |
| !!! | GCTTGGCTTGATTTTTTTTG+GGG | + | chr1_4:26288714-26288733 | None:intergenic | 35.0% |
| !!! | GGCTTGGCTTGATTTTTTTT+GGG | + | chr1_4:26288715-26288734 | None:intergenic | 35.0% |
| !!! | AGGCTTGGCTTGATTTTTTT+TGG | + | chr1_4:26288716-26288735 | None:intergenic | 35.0% |
| GAAAGAGGTTACATGAAGTT+TGG | - | chr1_4:26288776-26288795 | Msa0158000:intron | 35.0% | |
| AAGAGGTTACATGAAGTTTG+GGG | - | chr1_4:26288778-26288797 | Msa0158000:intron | 35.0% | |
| CAACGGAACTTGAATACAAT+GGG | + | chr1_4:26288841-26288860 | None:intergenic | 35.0% | |
| TCAACGGAACTTGAATACAA+TGG | + | chr1_4:26288842-26288861 | None:intergenic | 35.0% | |
| ! | TAGAAGCACATGTAATGAGA+GGG | + | chr1_4:26288976-26288995 | None:intergenic | 35.0% |
| ! | TTAGAAGCACATGTAATGAG+AGG | + | chr1_4:26288977-26288996 | None:intergenic | 35.0% |
| AAGTCATGTCTTAGTGCTTT+AGG | + | chr1_4:26289018-26289037 | None:intergenic | 35.0% | |
| ATGGATGAAAAGATAGGATC+AGG | + | chr1_4:26289112-26289131 | None:intergenic | 35.0% | |
| ! | GATCCTATCTTTTCATCCAT+CGG | - | chr1_4:26289112-26289131 | Msa0158000:CDS | 35.0% |
| GTTATGAAATGAACTTCCGA+TGG | + | chr1_4:26289131-26289150 | None:intergenic | 35.0% | |
| AAGCAGGATCAATATTGTGA+AGG | + | chr1_4:26289156-26289175 | None:intergenic | 35.0% | |
| !!! | ATTTTGAAATCCCGACTTTC+AGG | - | chr1_4:26289322-26289341 | Msa0158000:CDS | 35.0% |
| CACTGCATTGTCCAATAAAA+AGG | + | chr1_4:26289367-26289386 | None:intergenic | 35.0% | |
| GTTCTTCATGACTGGAATAT+AGG | - | chr1_4:26289543-26289562 | Msa0158000:CDS | 35.0% | |
| ACATGATCTAACTCAACAGT+GGG | + | chr1_4:26289823-26289842 | None:intergenic | 35.0% | |
| AACATGATCTAACTCAACAG+TGG | + | chr1_4:26289824-26289843 | None:intergenic | 35.0% | |
| TTGTCTCATCAAAGATGAGA+GGG | + | chr1_4:26289864-26289883 | None:intergenic | 35.0% | |
| ATTGTCTCATCAAAGATGAG+AGG | + | chr1_4:26289865-26289884 | None:intergenic | 35.0% | |
| CTTTGATGAGACAATGTTAG+AGG | - | chr1_4:26289870-26289889 | Msa0158000:intron | 35.0% | |
| ! | GAAATGACACGCATCTATTT+TGG | - | chr1_4:26289955-26289974 | Msa0158000:intron | 35.0% |
| ! | TTTTGGATGGTCTGTTTGTA+TGG | - | chr1_4:26289972-26289991 | Msa0158000:intron | 35.0% |
| AGGGAGCTAAAACTAACTTA+AGG | + | chr1_4:26290062-26290081 | None:intergenic | 35.0% | |
| !! | TAGGGTCTCTTTTGATTCAA+AGG | + | chr1_4:26290177-26290196 | None:intergenic | 35.0% |
| AAGTTGGCAAAACAAGATGA+AGG | - | chr1_4:26290277-26290296 | Msa0158000:intron | 35.0% | |
| TCATTGTCATCAACATTCTC+AGG | + | chr1_4:26290304-26290323 | None:intergenic | 35.0% | |
| !! | GAATGTTGATGACAATGATG+AGG | - | chr1_4:26290306-26290325 | Msa0158000:intron | 35.0% |
| CAATGATGAGGATGAATCTA+TGG | - | chr1_4:26290318-26290337 | Msa0158000:intron | 35.0% | |
| TGATAAAGAGGATGTTAGCA+AGG | - | chr1_4:26290345-26290364 | Msa0158000:intron | 35.0% | |
| AAGTCATAATCACCATCCAT+AGG | + | chr1_4:26290499-26290518 | None:intergenic | 35.0% | |
| TTACTTCAAAAAGGACACGA+TGG | - | chr1_4:26290528-26290547 | Msa0158000:intron | 35.0% | |
| TGCGCACACATAAATTTAGA+CGG | - | chr1_4:26290652-26290671 | Msa0158000:intron | 35.0% | |
| AAATTTAGACGGATGTAAGG+TGG | - | chr1_4:26290663-26290682 | Msa0158000:intron | 35.0% | |
| TTTGGATAGGTCAAGAATTG+AGG | - | chr1_4:26290786-26290805 | Msa0158000:CDS | 35.0% | |
| ! | TTTGAAGCACTTGTTAGTTC+CGG | - | chr1_4:26290897-26290916 | Msa0158000:CDS | 35.0% |
| !!! | AAAGCATTTTTGGCATTTCC+CGG | + | chr1_4:26290919-26290938 | None:intergenic | 35.0% |
| TTAGTAACATATCACGCATG+TGG | - | chr1_4:26291020-26291039 | Msa0158000:exon | 35.0% | |
| ! | TTTAGGGTTTGAAAGGGTTG+CGG | + | chr1_4:26284690-26284709 | None:intergenic | 40.0% |
| AAGAAGGTTGAGAAAGATCC+TGG | - | chr1_4:26284928-26284947 | Msa0158000:three_prime_UTR | 40.0% | |
| !!! | TGATTGGCCTTTTAAGGAAC+AGG | - | chr1_4:26284960-26284979 | Msa0158000:intron | 40.0% |
| TTGTCCCTGTTTGGATAATG+AGG | - | chr1_4:26285446-26285465 | Msa0158000:CDS | 40.0% | |
| !! | CTTTCCAAAACTTGTTGTCC+CGG | - | chr1_4:26285707-26285726 | Msa0158000:intron | 40.0% |
| ! | TTTACCGGGACAACAAGTTT+TGG | + | chr1_4:26285714-26285733 | None:intergenic | 40.0% |
| ! | TCTTGTTTCAGGCTCGTAAA+AGG | - | chr1_4:26286090-26286109 | Msa0158000:intron | 40.0% |
| TTGGAGTTATCATCATCCAC+TGG | + | chr1_4:26286128-26286147 | None:intergenic | 40.0% | |
| AGAAGCCGTTTCAACTGAAT+TGG | + | chr1_4:26286147-26286166 | None:intergenic | 40.0% | |
| AGAGTCTGATGTCATACTAG+AGG | - | chr1_4:26286366-26286385 | Msa0158000:intron | 40.0% | |
| TTAACACAACGAGTACCCAA+GGG | + | chr1_4:26286409-26286428 | None:intergenic | 40.0% | |
| ATATTCCCAGAAGGGAAAAG+GGG | + | chr1_4:26286522-26286541 | None:intergenic | 40.0% | |
| GAATTATGCAAGAAGCGACA+AGG | - | chr1_4:26286766-26286785 | Msa0158000:intron | 40.0% | |
| CTTGTGATTCACATGCTTCT+TGG | - | chr1_4:26287017-26287036 | Msa0158000:intron | 40.0% | |
| ACGAGGGTTTGTAGAACAAA+AGG | + | chr1_4:26287441-26287460 | None:intergenic | 40.0% | |
| GTGAAGTTACAAGAATTGGG+AGG | + | chr1_4:26287827-26287846 | None:intergenic | 40.0% | |
| CTCAAGACATCAATCACTGT+TGG | - | chr1_4:26287912-26287931 | Msa0158000:intron | 40.0% | |
| ! | GACATCAATCACTGTTGGTT+TGG | - | chr1_4:26287917-26287936 | Msa0158000:intron | 40.0% |
| !! | TCAATCACTGTTGGTTTGGT+TGG | - | chr1_4:26287921-26287940 | Msa0158000:intron | 40.0% |
| GTCAAAGCAAGAGATTCGTT+TGG | - | chr1_4:26288031-26288050 | Msa0158000:intron | 40.0% | |
| ! | TGCTACTTGAAATGGATGGT+TGG | - | chr1_4:26288242-26288261 | Msa0158000:intron | 40.0% |
| GAAAATGGAGGGTTATACAG+AGG | + | chr1_4:26288278-26288297 | None:intergenic | 40.0% | |
| ! | CCAGAAAGGAGCATAAAAGA+TGG | + | chr1_4:26288451-26288470 | None:intergenic | 40.0% |
| ! | CCATCTTTTATGCTCCTTTC+TGG | - | chr1_4:26288448-26288467 | Msa0158000:intron | 40.0% |
| CATGATCTCAGTTGAAGGAA+TGG | - | chr1_4:26288505-26288524 | Msa0158000:intron | 40.0% | |
| !!! | TTACCACTGCTTGCTTTTTG+TGG | - | chr1_4:26288650-26288669 | Msa0158000:intron | 40.0% |
| ATTCCACAAAAAGCAAGCAG+TGG | + | chr1_4:26288656-26288675 | None:intergenic | 40.0% | |
| CAAATAAGAACTAGGTGGTG+AGG | + | chr1_4:26288757-26288776 | None:intergenic | 40.0% | |
| TCATGCCCTTACTATATCGA+TGG | + | chr1_4:26288817-26288836 | None:intergenic | 40.0% | |
| ! | TCTTAGTGCTTTAGGCATGT+GGG | + | chr1_4:26289010-26289029 | None:intergenic | 40.0% |
| CTTCCGATGGATGAAAAGAT+AGG | + | chr1_4:26289118-26289137 | None:intergenic | 40.0% | |
| TGATGACTTCCTACAGATTG+TGG | - | chr1_4:26289458-26289477 | Msa0158000:intron | 40.0% | |
| TAACAGTAGCCACAATCTGT+AGG | + | chr1_4:26289470-26289489 | None:intergenic | 40.0% | |
| TACAGATTGTGGCTACTGTT+AGG | - | chr1_4:26289469-26289488 | Msa0158000:intron | 40.0% | |
| ACAGATTGTGGCTACTGTTA+GGG | - | chr1_4:26289470-26289489 | Msa0158000:intron | 40.0% | |
| CAAGAATCGTTCTTCATGAC+TGG | - | chr1_4:26289535-26289554 | Msa0158000:CDS | 40.0% | |
| ! | ACTGGGGGCATAGTATAATA+TGG | + | chr1_4:26289691-26289710 | None:intergenic | 40.0% |
| ATTATACTATGCCCCCAGTT+AGG | - | chr1_4:26289692-26289711 | Msa0158000:intron | 40.0% | |
| TTATACTATGCCCCCAGTTA+GGG | - | chr1_4:26289693-26289712 | Msa0158000:intron | 40.0% | |
| !! | TGACACGCATCTATTTTGGA+TGG | - | chr1_4:26289959-26289978 | Msa0158000:intron | 40.0% |
| TCTGTTTGTATGGAGGGAAA+TGG | - | chr1_4:26289982-26290001 | Msa0158000:intron | 40.0% | |
| TTTGTATGGAGGGAAATGGA+AGG | - | chr1_4:26289986-26290005 | Msa0158000:intron | 40.0% | |
| ACTTAACTGCTTTGTCATCC+TGG | + | chr1_4:26290261-26290280 | None:intergenic | 40.0% | |
| GGATGACAAAGCAGTTAAGT+TGG | - | chr1_4:26290261-26290280 | Msa0158000:intron | 40.0% | |
| AGAGGATGTTAGCAAGGAAA+AGG | - | chr1_4:26290351-26290370 | Msa0158000:intron | 40.0% | |
| GAGAAGTTATATACGGCAGA+GGG | - | chr1_4:26290400-26290419 | Msa0158000:intron | 40.0% | |
| !! | GTTCAGGTTGATGCATGATT+TGG | - | chr1_4:26290628-26290647 | Msa0158000:intron | 40.0% |
| CTACTGTCCCTTCAACAATT+TGG | - | chr1_4:26290857-26290876 | Msa0158000:CDS | 40.0% | |
| ! | TTGAAGCACTTGTTAGTTCC+GGG | - | chr1_4:26290898-26290917 | Msa0158000:CDS | 40.0% |
| !! | GCTCAGCCTTAAAGCATTTT+TGG | + | chr1_4:26290929-26290948 | None:intergenic | 40.0% |
| ! | GGCCAATCATTTGGAATACC+AGG | + | chr1_4:26284949-26284968 | None:intergenic | 45.0% |
| AGAACGTGCTCTTGCTGAAT+TGG | - | chr1_4:26285008-26285027 | Msa0158000:intron | 45.0% | |
| GAGAGTCTACTCAGAGATGT+AGG | - | chr1_4:26285968-26285987 | Msa0158000:CDS | 45.0% | |
| GTTTCAGGCTCGTAAAAGGA+AGG | - | chr1_4:26286094-26286113 | Msa0158000:intron | 45.0% | |
| CGCAACAGTAGGAACAGTTT+CGG | + | chr1_4:26286180-26286199 | None:intergenic | 45.0% | |
| GGCCCTATCTGAACTATCTA+TGG | + | chr1_4:26286317-26286336 | None:intergenic | 45.0% | |
| CTGATCCAAATCACTGGCAA+AGG | + | chr1_4:26286338-26286357 | None:intergenic | 45.0% | |
| ! | CTTTGCCAGTGATTTGGATC+AGG | - | chr1_4:26286336-26286355 | Msa0158000:intron | 45.0% |
| GTTAACACAACGAGTACCCA+AGG | + | chr1_4:26286410-26286429 | None:intergenic | 45.0% | |
| GAAAAAAGGGTGAGGAAAGC+AGG | - | chr1_4:26286433-26286452 | Msa0158000:intron | 45.0% | |
| GAAGGGAAAAGGGGAGAAAA+AGG | + | chr1_4:26286513-26286532 | None:intergenic | 45.0% | |
| ! | TTTTCTCCCCTTTTCCCTTC+TGG | - | chr1_4:26286513-26286532 | Msa0158000:intron | 45.0% |
| ! | TTTCTCCCCTTTTCCCTTCT+GGG | - | chr1_4:26286514-26286533 | Msa0158000:intron | 45.0% |
| ! | ACTTCTCAACTGACTCTCGA+GGG | + | chr1_4:26286589-26286608 | None:intergenic | 45.0% |
| CAGTAGGGAATTCTTCTCGA+AGG | + | chr1_4:26286622-26286641 | None:intergenic | 45.0% | |
| TGCACTTGAAAGCGACAGTA+GGG | + | chr1_4:26286637-26286656 | None:intergenic | 45.0% | |
| AAATGCTAACTAGCTCCCCT+GGG | - | chr1_4:26287103-26287122 | Msa0158000:intron | 45.0% | |
| GGAGATGACTTCAAGTACCT+GGG | + | chr1_4:26288175-26288194 | None:intergenic | 45.0% | |
| AGGAGATGACTTCAAGTACC+TGG | + | chr1_4:26288176-26288195 | None:intergenic | 45.0% | |
| !! | GCTCTAGAACATGACCAGAA+AGG | + | chr1_4:26288465-26288484 | None:intergenic | 45.0% |
| GGTTAAAGGCAGCTAAATCG+AGG | + | chr1_4:26288736-26288755 | None:intergenic | 45.0% | |
| GAACTAGGTGGTGAGGTTAA+AGG | + | chr1_4:26288750-26288769 | None:intergenic | 45.0% | |
| ! | AGACCTTGATATGAAGTGCC+TGG | - | chr1_4:26288873-26288892 | Msa0158000:intron | 45.0% |
| CAACCAGGCACTTCATATCA+AGG | + | chr1_4:26288879-26288898 | None:intergenic | 45.0% | |
| ! | CTTAGTGCTTTAGGCATGTG+GGG | + | chr1_4:26289009-26289028 | None:intergenic | 45.0% |
| ! | GTCTTAGTGCTTTAGGCATG+TGG | + | chr1_4:26289011-26289030 | None:intergenic | 45.0% |
| TCCCAATAGAGCCTGAAAGT+CGG | + | chr1_4:26289336-26289355 | None:intergenic | 45.0% | |
| AAGAGATATCAGCACCCTAG+CGG | + | chr1_4:26289412-26289431 | None:intergenic | 45.0% | |
| CAGATTGTGGCTACTGTTAG+GGG | - | chr1_4:26289471-26289490 | Msa0158000:intron | 45.0% | |
| TTCTCCTTGATCCCTAACTG+GGG | + | chr1_4:26289707-26289726 | None:intergenic | 45.0% | |
| GTTCTCCTTGATCCCTAACT+GGG | + | chr1_4:26289708-26289727 | None:intergenic | 45.0% | |
| GAAACTATCTTGGCCTCTGA+AGG | + | chr1_4:26289730-26289749 | None:intergenic | 45.0% | |
| AAGATGAGAGGGCAACTTGA+AGG | + | chr1_4:26289853-26289872 | None:intergenic | 45.0% | |
| TGGATGGTCTGTTTGTATGG+AGG | - | chr1_4:26289975-26289994 | Msa0158000:intron | 45.0% | |
| GGATGGTCTGTTTGTATGGA+GGG | - | chr1_4:26289976-26289995 | Msa0158000:intron | 45.0% | |
| TATGGAGGGAAATGGAAGGT+GGG | - | chr1_4:26289990-26290009 | Msa0158000:intron | 45.0% | |
| CGAGAAGTTATATACGGCAG+AGG | - | chr1_4:26290399-26290418 | Msa0158000:intron | 45.0% | |
| ! | TTCTCTGCTCGCCTCAATTT+TGG | + | chr1_4:26290436-26290455 | None:intergenic | 45.0% |
| ATCCATAGGATCAGATGAGC+TGG | + | chr1_4:26290485-26290504 | None:intergenic | 45.0% | |
| AGCTCATCTGATCCTATGGA+TGG | - | chr1_4:26290484-26290503 | Msa0158000:intron | 45.0% | |
| TGATGAACAAGTCAACACCG+AGG | - | chr1_4:26290591-26290610 | Msa0158000:intron | 45.0% | |
| TCAACCTGAACACCAGACAT+GGG | + | chr1_4:26290619-26290638 | None:intergenic | 45.0% | |
| ATCAACCTGAACACCAGACA+TGG | + | chr1_4:26290620-26290639 | None:intergenic | 45.0% | |
| !!! | TAGATTTTTTTTTTTTTTAA+TGG | - | chr1_4:26285215-26285234 | Msa0158000:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTTTACTA+TGG | - | chr1_4:26289050-26289069 | Msa0158000:CDS | 5.0% |
| !!! | TTTTTTTTTTTTTTTACTAT+GGG | - | chr1_4:26289051-26289070 | Msa0158000:CDS | 5.0% |
| TCAGGCTCGTAAAAGGAAGG+CGG | - | chr1_4:26286097-26286116 | Msa0158000:intron | 50.0% | |
| TAGGGCCTTTGCCAGTGATT+TGG | - | chr1_4:26286330-26286349 | Msa0158000:CDS | 50.0% | |
| TACTAGAGGTCCTTGATGCC+CGG | - | chr1_4:26286380-26286399 | Msa0158000:intron | 50.0% | |
| ! | CACTTCTCAACTGACTCTCG+AGG | + | chr1_4:26286590-26286609 | None:intergenic | 50.0% |
| CTCGAGAGTCAGTTGAGAAG+TGG | - | chr1_4:26286588-26286607 | Msa0158000:intron | 50.0% | |
| CTGCACTTGAAAGCGACAGT+AGG | + | chr1_4:26286638-26286657 | None:intergenic | 50.0% | |
| GAAATGCTAACTAGCTCCCC+TGG | - | chr1_4:26287102-26287121 | Msa0158000:intron | 50.0% | |
| AATGCTAACTAGCTCCCCTG+GGG | - | chr1_4:26287104-26287123 | Msa0158000:intron | 50.0% | |
| TATGCTAACCGGTGCCTCAT+GGG | + | chr1_4:26287261-26287280 | None:intergenic | 50.0% | |
| TTATGCTAACCGGTGCCTCA+TGG | + | chr1_4:26287262-26287281 | None:intergenic | 50.0% | |
| TTGGTTGGACTGCCCAATGT+TGG | - | chr1_4:26287936-26287955 | Msa0158000:intron | 50.0% | |
| !! | TAGCACTGACATCGACAGCA+TGG | + | chr1_4:26287995-26288014 | None:intergenic | 50.0% |
| TCGATGTCAGTGCTAGTGCT+GGG | - | chr1_4:26288000-26288019 | Msa0158000:intron | 50.0% | |
| ! | GTTAAGTTGCTGGATTGCCC+TGG | - | chr1_4:26288062-26288081 | Msa0158000:intron | 50.0% |
| AGTCCAGCATGACAACACCA+GGG | + | chr1_4:26288082-26288101 | None:intergenic | 50.0% | |
| TTAGCTGATCCAGTTAGCCC+AGG | - | chr1_4:26288155-26288174 | Msa0158000:intron | 50.0% | |
| CTTCAAGTACCTGGGCTAAC+TGG | + | chr1_4:26288167-26288186 | None:intergenic | 50.0% | |
| AAGGCAGCTAAATCGAGGCT+TGG | + | chr1_4:26288731-26288750 | None:intergenic | 50.0% | |
| TCCCGACTTTCAGGCTCTAT+TGG | - | chr1_4:26289331-26289350 | Msa0158000:CDS | 50.0% | |
| CCCAATAGAGCCTGAAAGTC+GGG | + | chr1_4:26289335-26289354 | None:intergenic | 50.0% | |
| CCCGACTTTCAGGCTCTATT+GGG | - | chr1_4:26289332-26289351 | Msa0158000:CDS | 50.0% | |
| AGAGATATCAGCACCCTAGC+GGG | + | chr1_4:26289411-26289430 | None:intergenic | 50.0% | |
| TGTTAGGGGCAAGCTCAAGA+AGG | - | chr1_4:26289485-26289504 | Msa0158000:intron | 50.0% | |
| GTTAGGGGCAAGCTCAAGAA+GGG | - | chr1_4:26289486-26289505 | Msa0158000:intron | 50.0% | |
| TCTCCTTGATCCCTAACTGG+GGG | + | chr1_4:26289706-26289725 | None:intergenic | 50.0% | |
| GGTTCTCCTTGATCCCTAAC+TGG | + | chr1_4:26289709-26289728 | None:intergenic | 50.0% | |
| GGATCAAGGAGAACCTTCAG+AGG | - | chr1_4:26289714-26289733 | Msa0158000:intron | 50.0% | |
| GTATGGAGGGAAATGGAAGG+TGG | - | chr1_4:26289989-26290008 | Msa0158000:intron | 50.0% | |
| AGCCAGCTCATCTGATCCTA+TGG | - | chr1_4:26290480-26290499 | Msa0158000:intron | 50.0% | |
| AAGGACACGATGGATGCTGA+CGG | - | chr1_4:26290538-26290557 | Msa0158000:intron | 50.0% | |
| AACACCAGACATGGGAACCT+CGG | + | chr1_4:26290611-26290630 | None:intergenic | 50.0% | |
| CAGGCTCGTAAAAGGAAGGC+GGG | - | chr1_4:26286098-26286117 | Msa0158000:intron | 55.0% | |
| AGGCTCGTAAAAGGAAGGCG+GGG | - | chr1_4:26286099-26286118 | Msa0158000:intron | 55.0% | |
| ACTAGAGGTCCTTGATGCCC+GGG | - | chr1_4:26286381-26286400 | Msa0158000:intron | 55.0% | |
| AACGAGTACCCAAGGGATCC+CGG | + | chr1_4:26286402-26286421 | None:intergenic | 55.0% | |
| GTCGATGTCAGTGCTAGTGC+TGG | - | chr1_4:26287999-26288018 | Msa0158000:intron | 55.0% | |
| !! | TTGCCCTGGTGTTGTCATGC+TGG | - | chr1_4:26288076-26288095 | Msa0158000:intron | 55.0% |
| GAGTCCAGCATGACAACACC+AGG | + | chr1_4:26288083-26288102 | None:intergenic | 55.0% | |
| TTCTCAAGCTCTGTCCCGCT+AGG | - | chr1_4:26289394-26289413 | Msa0158000:CDS | 55.0% | |
| TCTCAAGCTCTGTCCCGCTA+GGG | - | chr1_4:26289395-26289414 | Msa0158000:CDS | 55.0% | |
| ATGCCCCCAGTTAGGGATCA+AGG | - | chr1_4:26289700-26289719 | Msa0158000:intron | 55.0% | |
| AGGACACGATGGATGCTGAC+GGG | - | chr1_4:26290539-26290558 | Msa0158000:intron | 55.0% | |
| ATGGATGCTGACGGGAGTGA+CGG | - | chr1_4:26290547-26290566 | Msa0158000:intron | 55.0% | |
| ! | GACGGTGGTGACGACAATGA+TGG | - | chr1_4:26290565-26290584 | Msa0158000:intron | 55.0% |
| AACACCGAGGTTCCCATGTC+TGG | - | chr1_4:26290604-26290623 | Msa0158000:intron | 55.0% | |
| GGTTCCCATGTCTGGTGTTC+AGG | - | chr1_4:26290612-26290631 | Msa0158000:intron | 55.0% | |
| CTTGATGCCCGGGATCCCTT+GGG | - | chr1_4:26286391-26286410 | Msa0158000:intron | 60.0% | |
| ACGAGTACCCAAGGGATCCC+GGG | + | chr1_4:26286401-26286420 | None:intergenic | 60.0% | |
| TCCTTAACCCAGTGCCCCAG+GGG | + | chr1_4:26287121-26287140 | None:intergenic | 60.0% | |
| CTCCTTAACCCAGTGCCCCA+GGG | + | chr1_4:26287122-26287141 | None:intergenic | 60.0% | |
| ACTCCTTAACCCAGTGCCCC+AGG | + | chr1_4:26287123-26287142 | None:intergenic | 60.0% | |
| CTCCTTAACCGGTGCCCATG+AGG | - | chr1_4:26287244-26287263 | Msa0158000:intron | 60.0% | |
| !! | TGCCTCATGGGCACCGGTTA+AGG | + | chr1_4:26287249-26287268 | None:intergenic | 60.0% |
| ! | GTGCTAGTGCTGGGTCGACA+AGG | - | chr1_4:26288009-26288028 | Msa0158000:intron | 60.0% |
| AGGGGCAAGCTCAAGAAGGG+TGG | - | chr1_4:26289489-26289508 | Msa0158000:intron | 60.0% | |
| AAGGAAGGCGGGGTTGCCAG+TGG | - | chr1_4:26286109-26286128 | Msa0158000:intron | 65.0% | |
| CCAAGGGATCCCGGGCATCA+AGG | + | chr1_4:26286393-26286412 | None:intergenic | 65.0% | |
| CCTTGATGCCCGGGATCCCT+TGG | - | chr1_4:26286390-26286409 | Msa0158000:intron | 65.0% | |
| AACTAGCTCCCCTGGGGCAC+TGG | - | chr1_4:26287110-26287129 | Msa0158000:intron | 65.0% | |
| ! | ACTAGCTCCCCTGGGGCACT+GGG | - | chr1_4:26287111-26287130 | Msa0158000:intron | 65.0% |
| !! | TCCCCTGGGGCACTGGGTTA+AGG | - | chr1_4:26287117-26287136 | Msa0158000:intron | 65.0% |
| AACCGGTGCCCATGAGGCAC+CGG | - | chr1_4:26287250-26287269 | Msa0158000:intron | 65.0% | |
| AACCGGTGCCTCATGGGCAC+CGG | + | chr1_4:26287255-26287274 | None:intergenic | 65.0% | |
| GATGCTGACGGGAGTGACGG+TGG | - | chr1_4:26290550-26290569 | Msa0158000:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 26284686 | 26291051 | 26284686 | ID=Msa0158000;Name=Msa0158000 |
| chr1_4 | mRNA | 26284686 | 26291051 | 26284686 | ID=Msa0158000-mRNA-1;Parent=Msa0158000;Name=Msa0158000-mRNA-1;_AED=0.03;_eAED=0.03;_QI=24|1|1|1|0.88|0.8|10|306|599 |
| chr1_4 | exon | 26284686 | 26284960 | 26284686 | ID=Msa0158000-mRNA-1:exon:8815;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26285061 | 26285475 | 26285061 | ID=Msa0158000-mRNA-1:exon:8814;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26285846 | 26286057 | 26285846 | ID=Msa0158000-mRNA-1:exon:8813;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26286173 | 26286352 | 26286173 | ID=Msa0158000-mRNA-1:exon:8812;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26287561 | 26287825 | 26287561 | ID=Msa0158000-mRNA-1:exon:8811;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26288950 | 26289158 | 26288950 | ID=Msa0158000-mRNA-1:exon:8810;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26289244 | 26289417 | 26289244 | ID=Msa0158000-mRNA-1:exon:8809;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26289525 | 26289636 | 26289525 | ID=Msa0158000-mRNA-1:exon:8808;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26290678 | 26290922 | 26290678 | ID=Msa0158000-mRNA-1:exon:8807;Parent=Msa0158000-mRNA-1 |
| chr1_4 | exon | 26291009 | 26291051 | 26291009 | ID=Msa0158000-mRNA-1:exon:8806;Parent=Msa0158000-mRNA-1 |
| chr1_4 | five_prime_UTR | 26291028 | 26291051 | 26291028 | ID=Msa0158000-mRNA-1:five_prime_utr;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26291009 | 26291027 | 26291009 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26290678 | 26290922 | 26290678 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26289525 | 26289636 | 26289525 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26289244 | 26289417 | 26289244 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26288950 | 26289158 | 26288950 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26287561 | 26287825 | 26287561 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26286173 | 26286352 | 26286173 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26285846 | 26286057 | 26285846 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | CDS | 26285092 | 26285475 | 26285092 | ID=Msa0158000-mRNA-1:cds;Parent=Msa0158000-mRNA-1 |
| chr1_4 | three_prime_UTR | 26285061 | 26285091 | 26285061 | ID=Msa0158000-mRNA-1:three_prime_utr;Parent=Msa0158000-mRNA-1 |
| chr1_4 | three_prime_UTR | 26284686 | 26284960 | 26284686 | ID=Msa0158000-mRNA-1:three_prime_utr;Parent=Msa0158000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
