Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869130 | XP_003618203.2 | 96.026 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869130 | sp|Q6NVR9|ATAD3_XENTR | 38.819 | 559 | 311 | 7 | 41 | 597 | 37 | 566 | 4.62e-119 | 368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869130 | G7KHK9 | 96.026 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0869130 | 0.865075 | 7.681102e-65 | -8.615850e-47 |
| Msa0021220 | Msa0869130 | 0.812093 | 5.042054e-51 | -8.615850e-47 |
| Msa0033950 | Msa0869130 | 0.808182 | 3.511545e-50 | -8.615850e-47 |
| Msa0034030 | Msa0869130 | 0.807382 | 5.193477e-50 | -8.615850e-47 |
| Msa0043660 | Msa0869130 | 0.865994 | 3.941604e-65 | -8.615850e-47 |
| Msa0047160 | Msa0869130 | 0.807957 | 3.921460e-50 | -8.615850e-47 |
| Msa0054440 | Msa0869130 | 0.813193 | 2.897292e-51 | -8.615850e-47 |
| Msa0067630 | Msa0869130 | 0.861007 | 1.387686e-63 | -8.615850e-47 |
| Msa0070700 | Msa0869130 | 0.803364 | 3.612084e-49 | -8.615850e-47 |
| Msa0079820 | Msa0869130 | 0.824221 | 9.078416e-54 | -8.615850e-47 |
| Msa0115130 | Msa0869130 | 0.834998 | 2.166769e-56 | -8.615850e-47 |
| Msa0118590 | Msa0869130 | 0.808344 | 3.242819e-50 | -8.615850e-47 |
| Msa0605000 | Msa0869130 | 0.843083 | 1.742641e-58 | -8.615850e-47 |
| Msa0638370 | Msa0869130 | 0.817290 | 3.560668e-52 | -8.615850e-47 |
| Msa0648780 | Msa0869130 | 0.839304 | 1.716649e-57 | -8.615850e-47 |
| Msa0660850 | Msa0869130 | 0.816914 | 4.325527e-52 | -8.615850e-47 |
| Msa0685140 | Msa0869130 | 0.844595 | 6.857795e-59 | -8.615850e-47 |
| Msa0689260 | Msa0869130 | 0.805182 | 1.510116e-49 | -8.615850e-47 |
| Msa0691290 | Msa0869130 | 0.802014 | 6.859695e-49 | -8.615850e-47 |
| Msa0698800 | Msa0869130 | 0.804608 | 1.990924e-49 | -8.615850e-47 |
| Msa0709040 | Msa0869130 | 0.830028 | 3.697326e-55 | -8.615850e-47 |
| Msa0709730 | Msa0869130 | 0.841243 | 5.346380e-58 | -8.615850e-47 |
| Msa0715650 | Msa0869130 | 0.834378 | 3.102647e-56 | -8.615850e-47 |
| Msa0719420 | Msa0869130 | 0.859833 | 3.146077e-63 | -8.615850e-47 |
| Msa0719610 | Msa0869130 | 0.850717 | 1.417155e-60 | -8.615850e-47 |
| Msa0753140 | Msa0869130 | 0.815781 | 7.754353e-52 | -8.615850e-47 |
| Msa0757940 | Msa0869130 | 0.817327 | 3.492764e-52 | -8.615850e-47 |
| Msa0763330 | Msa0869130 | 0.857200 | 1.919189e-62 | -8.615850e-47 |
| Msa0772480 | Msa0869130 | 0.851114 | 1.096038e-60 | -8.615850e-47 |
| Msa0789680 | Msa0869130 | 0.861271 | 1.153680e-63 | -8.615850e-47 |
| Msa0790120 | Msa0869130 | 0.801762 | 7.727618e-49 | -8.615850e-47 |
| Msa0798440 | Msa0869130 | 0.839721 | 1.337991e-57 | -8.615850e-47 |
| Msa0799260 | Msa0869130 | 0.825940 | 3.562688e-54 | -8.615850e-47 |
| Msa0799310 | Msa0869130 | 0.820932 | 5.282732e-53 | -8.615850e-47 |
| Msa0802410 | Msa0869130 | 0.848299 | 6.694339e-60 | -8.615850e-47 |
| Msa0830040 | Msa0869130 | 0.826278 | 2.961293e-54 | -8.615850e-47 |
| Msa0830540 | Msa0869130 | 0.820368 | 7.117960e-53 | -8.615850e-47 |
| Msa0137550 | Msa0869130 | 0.860433 | 2.072462e-63 | -8.615850e-47 |
| Msa0144370 | Msa0869130 | 0.820858 | 5.492595e-53 | -8.615850e-47 |
| Msa0146770 | Msa0869130 | 0.832945 | 7.076363e-56 | -8.615850e-47 |
| Msa0158000 | Msa0869130 | 0.808416 | 3.130106e-50 | -8.615850e-47 |
| Msa0159170 | Msa0869130 | 0.850206 | 1.972865e-60 | -8.615850e-47 |
| Msa0189300 | Msa0869130 | 0.829355 | 5.393112e-55 | -8.615850e-47 |
| Msa0231660 | Msa0869130 | 0.831843 | 1.326750e-55 | -8.615850e-47 |
| Msa0388700 | Msa0869130 | 0.806674 | 7.333923e-50 | -8.615850e-47 |
| Msa0449210 | Msa0869130 | 0.802034 | 6.794474e-49 | -8.615850e-47 |
| Msa0482130 | Msa0869130 | 0.847424 | 1.166454e-59 | -8.615850e-47 |
| Msa0309750 | Msa0869130 | 0.800018 | 1.754287e-48 | -8.615850e-47 |
| Msa0325590 | Msa0869130 | 0.822982 | 1.770200e-53 | -8.615850e-47 |
| Msa0351990 | Msa0869130 | 0.814057 | 1.870067e-51 | -8.615850e-47 |
| Msa0542090 | Msa0869130 | 0.844749 | 6.235355e-59 | -8.615850e-47 |
| Msa0542130 | Msa0869130 | 0.842896 | 1.953594e-58 | -8.615850e-47 |
| Msa0554290 | Msa0869130 | 0.813600 | 2.357585e-51 | -8.615850e-47 |
| Msa0566100 | Msa0869130 | 0.807744 | 4.351516e-50 | -8.615850e-47 |
| Msa0573140 | Msa0869130 | 0.842426 | 2.604188e-58 | -8.615850e-47 |
| Msa0581280 | Msa0869130 | 0.826643 | 2.423999e-54 | -8.615850e-47 |
| Msa0601150 | Msa0869130 | 0.811702 | 6.135599e-51 | -8.615850e-47 |
| Msa0869130 | Msa0879540 | 0.802421 | 5.655664e-49 | -8.615850e-47 |
| Msa0869130 | Msa0925770 | 0.827024 | 1.966001e-54 | -8.615850e-47 |
| Msa0869130 | Msa0932840 | 0.804459 | 2.138151e-49 | -8.615850e-47 |
| Msa0869130 | Msa0933240 | 0.827671 | 1.375430e-54 | -8.615850e-47 |
| Msa0869130 | Msa0933300 | 0.933480 | 1.760035e-95 | -8.615850e-47 |
| Msa0869130 | Msa0945440 | 0.847262 | 1.292210e-59 | -8.615850e-47 |
| Msa0869130 | Msa0989540 | 0.811282 | 7.570515e-51 | -8.615850e-47 |
| Msa0869130 | Msa1128570 | 0.818150 | 2.277240e-52 | -8.615850e-47 |
| Msa0869130 | Msa1137700 | 0.807617 | 4.630705e-50 | -8.615850e-47 |
| Msa0869130 | Msa1153060 | 0.849830 | 2.513833e-60 | -8.615850e-47 |
| Msa0869130 | Msa1160590 | 0.813914 | 2.010397e-51 | -8.615850e-47 |
| Msa0869130 | Msa1197320 | 0.807832 | 4.168995e-50 | -8.615850e-47 |
| Msa0869130 | Msa1209200 | 0.820134 | 8.051299e-53 | -8.615850e-47 |
| Msa0869130 | Msa1209260 | 0.853194 | 2.807702e-61 | -8.615850e-47 |
| Msa0869130 | Msa1209760 | 0.818723 | 1.688795e-52 | -8.615850e-47 |
| Msa0869130 | Msa1265630 | 0.807619 | 4.626736e-50 | -8.615850e-47 |
| Msa0869130 | Msa1332590 | 0.801059 | 1.076207e-48 | -8.615850e-47 |
| Msa0869130 | Msa1356400 | 0.807254 | 5.528570e-50 | -8.615850e-47 |
| Msa0869130 | Msa1358250 | 0.809601 | 1.745552e-50 | -8.615850e-47 |
| Msa0869130 | Msa1384880 | 0.800887 | 1.167237e-48 | -8.615850e-47 |
| Msa0869130 | Msa1400220 | 0.811791 | 5.866576e-51 | -8.615850e-47 |
| Msa0869130 | Msa1403420 | 0.807799 | 4.236936e-50 | -8.615850e-47 |
| Msa0869130 | Msa1419870 | 0.823226 | 1.552115e-53 | -8.615850e-47 |
| Msa0869130 | Msa1457920 | 0.831661 | 1.471307e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869130 | MtrunA17_Chr6g0450161 | 96.026 | 604 | 24 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1168 |
| Msa0869130 | MtrunA17_Chr4g0039781 | 69.885 | 611 | 175 | 3 | 1 | 603 | 1 | 610 | 0.0 | 842 |
| Msa0869130 | MtrunA17_Chr5g0404291 | 60.862 | 580 | 211 | 5 | 32 | 600 | 50 | 624 | 0.0 | 679 |
| Msa0869130 | MtrunA17_Chr4g0038101 | 33.766 | 154 | 94 | 4 | 362 | 509 | 758 | 909 | 4.40e-17 | 85.5 |
| Msa0869130 | MtrunA17_Chr8g0387641 | 28.502 | 207 | 118 | 5 | 362 | 563 | 557 | 738 | 5.26e-16 | 82.0 |
| Msa0869130 | MtrunA17_Chr3g0116131 | 30.622 | 209 | 111 | 6 | 362 | 563 | 939 | 1120 | 1.73e-15 | 80.5 |
| Msa0869130 | MtrunA17_Chr3g0127431 | 34.868 | 152 | 92 | 5 | 361 | 507 | 120 | 269 | 1.96e-15 | 78.6 |
| Msa0869130 | MtrunA17_Chr3g0141901 | 33.553 | 152 | 93 | 5 | 362 | 506 | 172 | 322 | 1.97e-15 | 78.6 |
| Msa0869130 | MtrunA17_Chr1g0195731 | 29.665 | 209 | 113 | 6 | 362 | 563 | 971 | 1152 | 3.19e-15 | 79.7 |
| Msa0869130 | MtrunA17_Chr8g0345461 | 27.799 | 259 | 151 | 10 | 272 | 506 | 105 | 351 | 3.38e-15 | 78.2 |
| Msa0869130 | MtrunA17_Chr3g0145011 | 33.553 | 152 | 93 | 5 | 362 | 506 | 175 | 325 | 3.81e-15 | 77.8 |
| Msa0869130 | MtrunA17_Chr1g0195741 | 29.665 | 209 | 113 | 6 | 362 | 563 | 975 | 1156 | 4.91e-15 | 79.0 |
| Msa0869130 | MtrunA17_Chr7g0264521 | 29.577 | 213 | 116 | 8 | 357 | 561 | 510 | 696 | 5.55e-15 | 78.6 |
| Msa0869130 | MtrunA17_Chr7g0264521 | 30.872 | 149 | 98 | 4 | 362 | 506 | 242 | 389 | 4.55e-14 | 75.5 |
| Msa0869130 | MtrunA17_Chr1g0204031 | 35.714 | 154 | 91 | 4 | 362 | 509 | 594 | 745 | 6.33e-15 | 78.6 |
| Msa0869130 | MtrunA17_Chr1g0200081 | 27.799 | 259 | 151 | 10 | 272 | 506 | 115 | 361 | 6.80e-15 | 77.4 |
| Msa0869130 | MtrunA17_Chr5g0397121 | 28.502 | 207 | 118 | 5 | 362 | 563 | 549 | 730 | 7.55e-15 | 78.2 |
| Msa0869130 | MtrunA17_Chr4g0026631 | 28.019 | 207 | 121 | 5 | 362 | 564 | 162 | 344 | 7.83e-15 | 77.0 |
| Msa0869130 | MtrunA17_Chr1g0180791 | 29.245 | 212 | 118 | 8 | 357 | 561 | 509 | 695 | 8.63e-15 | 77.8 |
| Msa0869130 | MtrunA17_Chr1g0180791 | 30.872 | 149 | 98 | 4 | 362 | 506 | 241 | 388 | 1.25e-13 | 74.3 |
| Msa0869130 | MtrunA17_Chr3g0127401 | 32.911 | 158 | 87 | 4 | 361 | 507 | 117 | 266 | 1.23e-14 | 76.3 |
| Msa0869130 | MtrunA17_Chr2g0327121 | 31.875 | 160 | 101 | 5 | 357 | 509 | 511 | 669 | 1.29e-14 | 77.4 |
| Msa0869130 | MtrunA17_Chr2g0327121 | 30.233 | 172 | 103 | 6 | 339 | 506 | 232 | 390 | 7.41e-13 | 71.6 |
| Msa0869130 | MtrunA17_Chr4g0050561 | 31.683 | 202 | 105 | 8 | 364 | 557 | 194 | 370 | 1.35e-14 | 76.3 |
| Msa0869130 | MtrunA17_Chr2g0289231 | 33.766 | 154 | 97 | 4 | 364 | 514 | 343 | 494 | 1.71e-14 | 76.6 |
| Msa0869130 | MtrunA17_Chr6g0462581 | 32.468 | 154 | 96 | 4 | 362 | 509 | 536 | 687 | 2.20e-14 | 76.6 |
| Msa0869130 | MtrunA17_Chr1g0192151 | 35.032 | 157 | 94 | 5 | 357 | 506 | 198 | 353 | 2.59e-14 | 75.5 |
| Msa0869130 | MtrunA17_Chr2g0321241 | 27.053 | 207 | 123 | 5 | 362 | 564 | 167 | 349 | 2.91e-14 | 75.5 |
| Msa0869130 | MtrunA17_Chr4g0014731 | 35.032 | 157 | 94 | 5 | 357 | 506 | 199 | 354 | 3.26e-14 | 75.1 |
| Msa0869130 | MtrunA17_Chr4g0004121 | 27.488 | 211 | 117 | 6 | 362 | 561 | 277 | 462 | 4.34e-14 | 75.1 |
| Msa0869130 | MtrunA17_Chr8g0362771 | 30.049 | 203 | 112 | 6 | 364 | 561 | 274 | 451 | 1.26e-13 | 73.9 |
| Msa0869130 | MtrunA17_Chr1g0202381 | 33.333 | 153 | 96 | 4 | 362 | 509 | 505 | 656 | 2.89e-13 | 73.2 |
| Msa0869130 | MtrunA17_Chr6g0459561 | 28.436 | 211 | 114 | 8 | 360 | 561 | 415 | 597 | 1.68e-12 | 70.5 |
| Msa0869130 | MtrunA17_Chr8g0357301 | 31.847 | 157 | 89 | 4 | 364 | 506 | 507 | 659 | 2.65e-12 | 70.1 |
| Msa0869130 | MtrunA17_Chr7g0255721 | 27.830 | 212 | 122 | 7 | 356 | 561 | 715 | 901 | 5.47e-12 | 68.9 |
| Msa0869130 | MtrunA17_Chr2g0277831 | 33.537 | 164 | 97 | 7 | 362 | 516 | 278 | 438 | 2.88e-11 | 66.6 |
| Msa0869130 | MtrunA17_Chr8g0388371 | 31.515 | 165 | 97 | 5 | 357 | 506 | 434 | 597 | 3.28e-11 | 66.6 |
| Msa0869130 | MtrunA17_Chr7g0217421 | 28.641 | 206 | 113 | 7 | 364 | 561 | 76 | 255 | 3.55e-11 | 65.5 |
| Msa0869130 | MtrunA17_Chr7g0246111 | 31.690 | 142 | 92 | 3 | 362 | 499 | 247 | 387 | 3.60e-11 | 65.9 |
| Msa0869130 | MtrunA17_Chr7g0255641 | 27.652 | 264 | 149 | 12 | 348 | 600 | 684 | 916 | 5.37e-11 | 65.9 |
| Msa0869130 | MtrunA17_Chr3g0086401 | 27.315 | 216 | 138 | 7 | 367 | 578 | 426 | 626 | 7.31e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869130 | AT3G03060.1 | 74.825 | 572 | 140 | 2 | 32 | 602 | 58 | 626 | 0.0 | 892 |
| Msa0869130 | AT5G16930.1 | 71.264 | 609 | 162 | 4 | 5 | 602 | 32 | 638 | 0.0 | 884 |
| Msa0869130 | AT2G18330.1 | 63.558 | 579 | 202 | 5 | 28 | 599 | 52 | 628 | 0.0 | 699 |
| Msa0869130 | AT4G36580.1 | 60.938 | 576 | 218 | 4 | 29 | 600 | 51 | 623 | 0.0 | 684 |
| Msa0869130 | AT3G19740.1 | 30.841 | 214 | 113 | 7 | 362 | 569 | 738 | 922 | 1.21e-18 | 90.9 |
| Msa0869130 | AT1G50140.2 | 30.841 | 214 | 113 | 7 | 362 | 569 | 726 | 910 | 2.65e-18 | 89.7 |
| Msa0869130 | AT1G50140.5 | 30.841 | 214 | 113 | 7 | 362 | 569 | 726 | 910 | 2.65e-18 | 89.7 |
| Msa0869130 | AT1G50140.3 | 30.841 | 214 | 113 | 7 | 362 | 569 | 748 | 932 | 2.90e-18 | 89.7 |
| Msa0869130 | AT1G50140.1 | 30.841 | 214 | 113 | 7 | 362 | 569 | 748 | 932 | 2.90e-18 | 89.7 |
| Msa0869130 | AT1G50140.4 | 30.841 | 214 | 113 | 7 | 362 | 569 | 748 | 932 | 2.90e-18 | 89.7 |
| Msa0869130 | AT5G19990.1 | 32.673 | 202 | 103 | 8 | 364 | 557 | 196 | 372 | 5.71e-16 | 80.9 |
| Msa0869130 | AT5G19990.3 | 32.673 | 202 | 103 | 8 | 364 | 557 | 196 | 372 | 5.71e-16 | 80.9 |
| Msa0869130 | AT5G19990.2 | 32.673 | 202 | 103 | 8 | 364 | 557 | 138 | 314 | 7.53e-16 | 80.1 |
| Msa0869130 | AT5G20000.1 | 32.673 | 202 | 103 | 8 | 364 | 557 | 196 | 372 | 7.89e-16 | 80.5 |
| Msa0869130 | AT1G45000.1 | 33.553 | 152 | 93 | 5 | 362 | 506 | 172 | 322 | 1.25e-15 | 79.7 |
| Msa0869130 | AT3G53230.1 | 30.047 | 213 | 115 | 9 | 357 | 561 | 509 | 695 | 1.30e-15 | 80.9 |
| Msa0869130 | AT3G53230.1 | 30.872 | 149 | 98 | 4 | 362 | 506 | 241 | 388 | 9.06e-14 | 75.1 |
| Msa0869130 | AT4G04180.1 | 36.601 | 153 | 79 | 5 | 364 | 506 | 362 | 506 | 1.33e-15 | 80.5 |
| Msa0869130 | AT4G04180.2 | 36.601 | 153 | 79 | 5 | 364 | 506 | 357 | 501 | 1.44e-15 | 80.5 |
| Msa0869130 | AT1G02890.1 | 29.665 | 209 | 113 | 6 | 362 | 563 | 978 | 1159 | 4.26e-15 | 79.7 |
| Msa0869130 | AT5G53540.1 | 35.065 | 154 | 89 | 4 | 361 | 507 | 120 | 269 | 5.01e-15 | 77.8 |
| Msa0869130 | AT5G03340.1 | 30.516 | 213 | 114 | 9 | 357 | 561 | 508 | 694 | 6.06e-15 | 79.0 |
| Msa0869130 | AT5G03340.1 | 30.872 | 149 | 98 | 4 | 362 | 506 | 240 | 387 | 2.13e-13 | 73.9 |
| Msa0869130 | AT1G53750.1 | 27.799 | 259 | 151 | 10 | 272 | 506 | 105 | 351 | 6.27e-15 | 77.8 |
| Msa0869130 | AT4G28000.3 | 32.692 | 156 | 93 | 4 | 362 | 509 | 553 | 704 | 6.62e-15 | 79.0 |
| Msa0869130 | AT4G28000.1 | 32.692 | 156 | 93 | 4 | 362 | 509 | 551 | 702 | 7.51e-15 | 78.6 |
| Msa0869130 | AT4G28000.2 | 32.692 | 156 | 93 | 4 | 362 | 509 | 553 | 704 | 7.59e-15 | 78.6 |
| Msa0869130 | AT5G43010.1 | 32.895 | 152 | 94 | 5 | 362 | 506 | 172 | 322 | 7.59e-15 | 77.4 |
| Msa0869130 | AT1G53780.2 | 34.810 | 158 | 95 | 5 | 356 | 506 | 388 | 544 | 1.14e-14 | 77.8 |
| Msa0869130 | AT1G64110.1 | 32.051 | 156 | 94 | 4 | 362 | 509 | 549 | 700 | 1.20e-14 | 77.8 |
| Msa0869130 | AT1G64110.2 | 32.051 | 156 | 94 | 4 | 362 | 509 | 554 | 705 | 1.25e-14 | 77.8 |
| Msa0869130 | AT1G64110.4 | 32.051 | 156 | 94 | 4 | 362 | 509 | 554 | 705 | 1.25e-14 | 77.8 |
| Msa0869130 | AT1G64110.5 | 32.051 | 156 | 94 | 4 | 362 | 509 | 552 | 703 | 1.29e-14 | 77.8 |
| Msa0869130 | AT1G64110.3 | 32.051 | 156 | 94 | 4 | 362 | 509 | 552 | 703 | 1.29e-14 | 77.8 |
| Msa0869130 | AT4G02480.1 | 29.665 | 209 | 113 | 6 | 362 | 563 | 997 | 1178 | 1.30e-14 | 78.2 |
| Msa0869130 | AT1G53780.3 | 34.810 | 158 | 95 | 5 | 356 | 506 | 366 | 522 | 1.39e-14 | 77.4 |
| Msa0869130 | AT1G53780.1 | 34.810 | 158 | 95 | 5 | 356 | 506 | 367 | 523 | 1.41e-14 | 77.4 |
| Msa0869130 | AT1G53780.4 | 34.810 | 158 | 95 | 5 | 356 | 506 | 367 | 523 | 1.41e-14 | 77.4 |
| Msa0869130 | AT3G09840.1 | 29.577 | 213 | 117 | 9 | 357 | 561 | 508 | 695 | 1.68e-14 | 77.4 |
| Msa0869130 | AT3G09840.1 | 30.872 | 149 | 98 | 4 | 362 | 506 | 240 | 387 | 2.05e-13 | 73.9 |
| Msa0869130 | AT5G52882.1 | 33.117 | 154 | 95 | 4 | 362 | 509 | 550 | 701 | 2.12e-14 | 77.0 |
| Msa0869130 | AT4G27680.1 | 36.129 | 155 | 86 | 6 | 361 | 507 | 117 | 266 | 2.16e-14 | 75.9 |
| Msa0869130 | AT1G09100.1 | 35.032 | 157 | 94 | 5 | 357 | 506 | 198 | 353 | 1.06e-13 | 73.9 |
| Msa0869130 | AT2G27600.1 | 26.570 | 207 | 124 | 5 | 362 | 564 | 164 | 346 | 2.61e-13 | 72.8 |
| Msa0869130 | AT4G24860.1 | 28.708 | 209 | 115 | 6 | 362 | 563 | 854 | 1035 | 2.66e-13 | 73.9 |
| Msa0869130 | AT3G05530.1 | 34.395 | 157 | 95 | 5 | 357 | 506 | 199 | 354 | 2.69e-13 | 72.8 |
| Msa0869130 | AT4G24860.3 | 28.708 | 209 | 115 | 6 | 362 | 563 | 852 | 1033 | 2.70e-13 | 73.9 |
| Msa0869130 | AT1G80350.1 | 27.488 | 211 | 117 | 6 | 362 | 561 | 271 | 456 | 2.76e-13 | 73.2 |
| Msa0869130 | AT4G24860.4 | 28.708 | 209 | 115 | 6 | 362 | 563 | 827 | 1008 | 2.82e-13 | 73.6 |
| Msa0869130 | AT4G24860.2 | 28.708 | 209 | 115 | 6 | 362 | 563 | 850 | 1031 | 3.29e-13 | 73.6 |
| Msa0869130 | AT1G79560.3 | 26.073 | 303 | 169 | 12 | 326 | 601 | 485 | 759 | 9.27e-13 | 72.0 |
| Msa0869130 | AT1G79560.2 | 26.073 | 303 | 169 | 12 | 326 | 601 | 485 | 759 | 1.03e-12 | 72.0 |
| Msa0869130 | AT1G79560.1 | 26.073 | 303 | 169 | 12 | 326 | 601 | 485 | 759 | 1.09e-12 | 71.6 |
| Msa0869130 | AT3G02450.1 | 34.228 | 149 | 91 | 5 | 364 | 507 | 368 | 514 | 1.29e-12 | 71.2 |
| Msa0869130 | AT1G62130.2 | 29.064 | 203 | 110 | 6 | 362 | 563 | 780 | 949 | 1.57e-12 | 71.2 |
| Msa0869130 | AT1G62130.1 | 29.064 | 203 | 110 | 6 | 362 | 563 | 787 | 956 | 1.69e-12 | 71.2 |
| Msa0869130 | AT3G27120.1 | 28.436 | 211 | 114 | 7 | 360 | 561 | 433 | 615 | 2.65e-12 | 70.5 |
| Msa0869130 | AT3G56690.1 | 28.155 | 206 | 118 | 7 | 362 | 562 | 417 | 597 | 4.48e-11 | 66.6 |
Find 155 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATTGATGGGAAGATTT+TGG | 0.152491 | 6_1:-2952788 | Msa0869130:intron |
| GCCATTGTCTTCCCTGTTCC+TGG | 0.205135 | 6_1:+2954411 | None:intergenic |
| TCAAATAATGGAAAGGGTTT+TGG | 0.219162 | 6_1:-2954546 | Msa0869130:CDS |
| GGGAAGGTGCACGGGTTATT+TGG | 0.224243 | 6_1:-2954698 | Msa0869130:CDS |
| GGGATATGTTGATAGAATAT+TGG | 0.232274 | 6_1:-2954676 | Msa0869130:CDS |
| AGATTTGTTTGAGAGCTTTA+AGG | 0.242036 | 6_1:+2957947 | None:intergenic |
| CCAGAATCTGTTTCAAATAA+TGG | 0.246142 | 6_1:-2954558 | Msa0869130:CDS |
| GGAAGGTGCACGGGTTATTT+GGG | 0.252159 | 6_1:-2954697 | Msa0869130:CDS |
| CCATTATTTGAAACAGATTC+TGG | 0.258534 | 6_1:+2954558 | None:intergenic |
| TGCTTCATCATATGCTAAAA+AGG | 0.263247 | 6_1:-2957923 | Msa0869130:intron |
| AATACTACCTTTGACCATAT+TGG | 0.291759 | 6_1:-2955396 | Msa0869130:CDS |
| CCACAAAAGATAGAGATTAA+AGG | 0.293367 | 6_1:-2953115 | Msa0869130:CDS |
| CCGTGAAGTTGTAGATTATA+AGG | 0.298092 | 6_1:-2952957 | Msa0869130:CDS |
| TAAACCCCTATTGGACTTCT+TGG | 0.299729 | 6_1:+2953656 | None:intergenic |
| GTCCTAGAATTTCCCTTGCC+TGG | 0.304734 | 6_1:-2953238 | Msa0869130:CDS |
| GATCCTGAACCTCTTGAAAA+AGG | 0.309618 | 6_1:-2957970 | Msa0869130:CDS |
| AATCCAAGGAGTGCTTCTTC+TGG | 0.327589 | 6_1:-2957997 | Msa0869130:CDS |
| GCTCTTGGTTCCTTACTCTA+TGG | 0.329815 | 6_1:+2955667 | None:intergenic |
| GCATCAACAAAGAATAAAAT+TGG | 0.330618 | 6_1:-2952927 | Msa0869130:CDS |
| CCCCAGGCAAGGGAAATTCT+AGG | 0.335721 | 6_1:+2953236 | None:intergenic |
| CAGTTTCGCTATTTCCCTTC+CGG | 0.338361 | 6_1:+2953042 | None:intergenic |
| TTATATGTAACACATGATTC+AGG | 0.338912 | 6_1:-2952704 | Msa0869130:three_prime_UTR |
| GGAAACAAGGCAAGCTGAAT+TGG | 0.344892 | 6_1:-2957729 | Msa0869130:CDS |
| TTCATGAATTATCATGGTTA+AGG | 0.346779 | 6_1:+2952645 | None:intergenic |
| GGATATGTTGATAGAATATT+GGG | 0.347459 | 6_1:-2954675 | Msa0869130:CDS |
| GGAGTGACTGCTCTGGCAGC+CGG | 0.356065 | 6_1:-2954960 | Msa0869130:CDS |
| AGCGACGGTGGCGGCGGTTA+AGG | 0.361305 | 6_1:+2958086 | None:intergenic |
| CAAGCTGGATCAAGAAAATC+TGG | 0.381037 | 6_1:-2953163 | Msa0869130:CDS |
| AGAAAAGGTTCTGAGGGTTT+TGG | 0.381654 | 6_1:+2958173 | None:intergenic |
| AAGTCGAGAAAGGGTGCTTT+TGG | 0.394444 | 6_1:+2954587 | None:intergenic |
| GAGTGACTGCTCTGGCAGCC+GGG | 0.400139 | 6_1:-2954959 | Msa0869130:CDS |
| TCATGAATTATCATGGTTAA+GGG | 0.401647 | 6_1:+2952646 | None:intergenic |
| TAATCGAATGAAAGCACAAT+TGG | 0.409012 | 6_1:-2957687 | Msa0869130:CDS |
| TCCTAGAATTTCCCTTGCCT+GGG | 0.409654 | 6_1:-2953237 | Msa0869130:CDS |
| ATTGGGCCAAGAAGTCCAAT+AGG | 0.417609 | 6_1:-2953662 | Msa0869130:CDS |
| TTATAGTGAAATCTTATTGA+AGG | 0.417856 | 6_1:-2952758 | Msa0869130:three_prime_UTR |
| CTTATTACGATCTGTTAGAA+TGG | 0.422073 | 6_1:+2955001 | None:intergenic |
| GATACACGAGTTGTTTGATT+GGG | 0.423129 | 6_1:-2953679 | Msa0869130:CDS |
| TGTGAAGAATGGTGAAGAAA+AGG | 0.423543 | 6_1:+2958158 | None:intergenic |
| ATGGCGAAAACCACTTTATC+CGG | 0.429316 | 6_1:-2958120 | Msa0869130:CDS |
| ATTTCCCTTGCCTGGGGAAG+AGG | 0.433738 | 6_1:-2953230 | Msa0869130:CDS |
| AGTGTCCAAGCTGCCGTGTA+TGG | 0.437138 | 6_1:-2953013 | Msa0869130:CDS |
| ACAGCACTTGCAAAAGCAAA+AGG | 0.438572 | 6_1:-2955513 | Msa0869130:CDS |
| CAGAGAGTTGGCTTACAAAT+CGG | 0.447484 | 6_1:-2954385 | Msa0869130:intron |
| TTGGGCCAAGAAGTCCAATA+GGG | 0.448894 | 6_1:-2953661 | Msa0869130:CDS |
| CAAGGACTATGTCTTTAGAT+TGG | 0.454660 | 6_1:+2953320 | None:intergenic |
| TCTGTTTCAAATAATGGAAA+GGG | 0.454708 | 6_1:-2954552 | Msa0869130:CDS |
| CCGTAGTTCATGAATTATCA+TGG | 0.459136 | 6_1:+2952639 | None:intergenic |
| CCTTATAATCTACAACTTCA+CGG | 0.459905 | 6_1:+2952957 | None:intergenic |
| CTGGTTTAGCAAGTCGAGAA+AGG | 0.462717 | 6_1:+2954577 | None:intergenic |
| AGATACACGAGTTGTTTGAT+TGG | 0.464111 | 6_1:-2953680 | Msa0869130:CDS |
| TCGAGAAAACGTGCCAGACC+AGG | 0.465385 | 6_1:+2954611 | None:intergenic |
| AGACCAGGGGTATTTCCCTC+TGG | 0.471013 | 6_1:+2954626 | None:intergenic |
| ATTGAGCGATGATATCATAA+AGG | 0.472275 | 6_1:-2953092 | Msa0869130:CDS |
| GCCCTTGCGACGAACCGTCC+TGG | 0.475674 | 6_1:-2953298 | Msa0869130:CDS |
| ATCTCAGATGGCTAAATATG+AGG | 0.478813 | 6_1:-2955815 | Msa0869130:CDS |
| CTAAATCACCCTTCTCAAGT+TGG | 0.479623 | 6_1:+2955445 | None:intergenic |
| AGGATGAGTTGGCAAGGAAG+AGG | 0.479629 | 6_1:-2955795 | Msa0869130:CDS |
| CACCAGGACGGTTCGTCGCA+AGG | 0.481861 | 6_1:+2953296 | None:intergenic |
| CGCTTCCATACACGGCAGCT+TGG | 0.482291 | 6_1:+2953008 | None:intergenic |
| ACCCGCTTTCGAAGATGAAT+CGG | 0.491673 | 6_1:+2958026 | None:intergenic |
| TGTTGCTCCACTCGGATCAC+AGG | 0.494047 | 6_1:-2953712 | Msa0869130:CDS |
| AAAATGAGTACCATAGAGTA+AGG | 0.494834 | 6_1:-2955677 | Msa0869130:CDS |
| GCCACCGTCGCTTTCTCCGA+TGG | 0.496229 | 6_1:-2958075 | Msa0869130:CDS |
| TTGTCTTCCCTGTTCCTGGA+GGG | 0.498774 | 6_1:+2954415 | None:intergenic |
| GGCTAAATATGAGGATGAGT+TGG | 0.500126 | 6_1:-2955806 | Msa0869130:CDS |
| AGAGGGAAATACCCCTGGTC+TGG | 0.500897 | 6_1:-2954624 | Msa0869130:CDS |
| TGAAAACACAAAATTACATC+AGG | 0.504750 | 6_1:-2954466 | Msa0869130:CDS |
| CGCTCCTCTTCCCCAGGCAA+GGG | 0.507955 | 6_1:+2953226 | None:intergenic |
| GACGGTTCGTCGCAAGGGCA+AGG | 0.508323 | 6_1:+2953302 | None:intergenic |
| TCATGTGTTACATATAATCA+TGG | 0.508564 | 6_1:+2952710 | None:intergenic |
| TGAAGAAGGAATGGCGCCAT+CGG | 0.514941 | 6_1:+2958059 | None:intergenic |
| GCAAGCTGAATTGGCTGCTA+AGG | 0.515586 | 6_1:-2957720 | Msa0869130:CDS |
| ATTTCCCTCTGGAGGACTCT+CGG | 0.515937 | 6_1:+2954637 | None:intergenic |
| TTCATGAACTACGGTGATTG+AGG | 0.516702 | 6_1:-2952630 | Msa0869130:three_prime_UTR |
| ATCTGTTTCAAATAATGGAA+AGG | 0.518634 | 6_1:-2954553 | Msa0869130:CDS |
| ACTACGAAAGCAAACTATAG+AGG | 0.520051 | 6_1:-2955571 | Msa0869130:CDS |
| AATCCAGAAGAAGCACTCCT+TGG | 0.521894 | 6_1:+2957994 | None:intergenic |
| CGATTTGTAAGCCAACTCTC+TGG | 0.521968 | 6_1:+2954386 | None:intergenic |
| GACAAGTACATAGCTCAAGC+TGG | 0.523738 | 6_1:-2953178 | Msa0869130:CDS |
| ACCGATTCATCTTCGAAAGC+GGG | 0.525273 | 6_1:-2958027 | Msa0869130:CDS |
| TGGTTTAGCAAGTCGAGAAA+GGG | 0.525545 | 6_1:+2954578 | None:intergenic |
| ACGCTCCTCTTCCCCAGGCA+AGG | 0.527101 | 6_1:+2953225 | None:intergenic |
| TCTAACAGATCGTAATAAGT+TGG | 0.527875 | 6_1:-2954997 | Msa0869130:CDS |
| TGGTGAAGAAAAGGTTCTGA+GGG | 0.528739 | 6_1:+2958167 | None:intergenic |
| TGCTGAAGATGAAGAAGGAA+TGG | 0.530211 | 6_1:+2958050 | None:intergenic |
| GAGGACTCTCGGATCAATGA+TGG | 0.530746 | 6_1:+2954648 | None:intergenic |
| CTTGAGCTATGTACTTGTCT+AGG | 0.530944 | 6_1:+2953182 | None:intergenic |
| ACCAGGACGGTTCGTCGCAA+GGG | 0.533090 | 6_1:+2953297 | None:intergenic |
| GAAGGTGCACGGGTTATTTG+GGG | 0.534601 | 6_1:-2954696 | Msa0869130:CDS |
| GGAGAAAGCGACGGTGGCGG+CGG | 0.535914 | 6_1:+2958080 | None:intergenic |
| TTGGATTATGCATTGATGAC+TGG | 0.537644 | 6_1:-2953741 | Msa0869130:CDS |
| TTCCCTTCCGGAAAATCCAT+CGG | 0.538043 | 6_1:+2953054 | None:intergenic |
| CCTCCAGAGGGAAATACCCC+TGG | 0.539942 | 6_1:-2954629 | Msa0869130:CDS |
| ATCGGAGAAAGCGACGGTGG+CGG | 0.539960 | 6_1:+2958077 | None:intergenic |
| CTAATGTAGGGAAGGTGCAC+GGG | 0.540661 | 6_1:-2954706 | Msa0869130:intron |
| AAGTTGGTCGTAACAGTTGG+TGG | 0.542001 | 6_1:-2954981 | Msa0869130:CDS |
| TGAGATATTGAAGAAACAAG+AGG | 0.542015 | 6_1:-2957750 | Msa0869130:CDS |
| ACTACCTTTGACCATATTGG+AGG | 0.546392 | 6_1:-2955393 | Msa0869130:intron |
| TTAAAACGCTCCTCTTCCCC+AGG | 0.548339 | 6_1:+2953220 | None:intergenic |
| CCATGATAATTCATGAACTA+CGG | 0.551545 | 6_1:-2952639 | Msa0869130:three_prime_UTR |
| GGTTAAGGCTGAGAATAAAC+CGG | 0.551769 | 6_1:+2958101 | None:intergenic |
| TGAGAATAAACCGGATAAAG+TGG | 0.552481 | 6_1:+2958110 | None:intergenic |
| GACAATGGCTGCCAGAGAGT+TGG | 0.552771 | 6_1:-2954397 | Msa0869130:CDS |
| TAGTAAGAGAATTGAGCAGC+TGG | 0.554062 | 6_1:-2954499 | Msa0869130:CDS |
| CCTAATGTAGGGAAGGTGCA+CGG | 0.555109 | 6_1:-2954707 | Msa0869130:intron |
| CAGGAGAAACCAACTTGAGA+AGG | 0.557237 | 6_1:-2955454 | Msa0869130:CDS |
| AATGCCCTTCTCTTTCGTAC+CGG | 0.559914 | 6_1:-2953346 | Msa0869130:CDS |
| ATTGTCTTCCCTGTTCCTGG+AGG | 0.560179 | 6_1:+2954414 | None:intergenic |
| AAAGCAAACTATAGAGGAGA+AGG | 0.564579 | 6_1:-2955565 | Msa0869130:CDS |
| GTTGGCAAGGAAGAGGATGC+AGG | 0.565436 | 6_1:-2955788 | Msa0869130:intron |
| AGAAGATTCATCAATCAGAC+TGG | 0.565440 | 6_1:-2955631 | Msa0869130:CDS |
| GGAGGAGATGTTGCTCCACT+CGG | 0.565757 | 6_1:-2953720 | Msa0869130:CDS |
| ATTCTAGGACCTCATCAATA+CGG | 0.565931 | 6_1:+2953251 | None:intergenic |
| AGTGACTGCTCTGGCAGCCG+GGG | 0.566373 | 6_1:-2954958 | Msa0869130:CDS |
| GGTCTGCTACAGCTGAATCA+AGG | 0.566819 | 6_1:+2953272 | None:intergenic |
| TAAAGCTTAGTTAGTGCAAG+AGG | 0.575329 | 6_1:-2952894 | Msa0869130:exon |
| TCAATTCTCTTACTAAGAGA+AGG | 0.575379 | 6_1:+2954507 | None:intergenic |
| TCGGTTGCTGAAGATGAAGA+AGG | 0.576794 | 6_1:+2958045 | None:intergenic |
| TTTACCTCCAATATGGTCAA+AGG | 0.577286 | 6_1:+2955389 | None:intergenic |
| CAGCACTTGCAAAAGCAAAA+GGG | 0.577360 | 6_1:-2955512 | Msa0869130:CDS |
| AGTTGGTGGAGTGACTGCTC+TGG | 0.577512 | 6_1:-2954967 | Msa0869130:CDS |
| TGAAGAAACAAGAGGAAACA+AGG | 0.578075 | 6_1:-2957742 | Msa0869130:CDS |
| AATAAGTTGGTCGTAACAGT+TGG | 0.580574 | 6_1:-2954984 | Msa0869130:CDS |
| ACAGTTGTCGCTTCCATACA+CGG | 0.583469 | 6_1:+2953000 | None:intergenic |
| CGAGAAAACGTGCCAGACCA+GGG | 0.583981 | 6_1:+2954612 | None:intergenic |
| ATGGTGAAGAAAAGGTTCTG+AGG | 0.593657 | 6_1:+2958166 | None:intergenic |
| ATACCTTGTTGTGTAGACCC+CGG | 0.606322 | 6_1:+2954941 | None:intergenic |
| GGTCACCGGTACGAAAGAGA+AGG | 0.606869 | 6_1:+2953341 | None:intergenic |
| AGGAGAAACCAACTTGAGAA+GGG | 0.608125 | 6_1:-2955453 | Msa0869130:CDS |
| GGCACAAACAAAATCTCAGA+TGG | 0.613066 | 6_1:-2955827 | Msa0869130:CDS |
| AATATGAGGATGAGTTGGCA+AGG | 0.615642 | 6_1:-2955801 | Msa0869130:CDS |
| AACCGATTCATCTTCGAAAG+CGG | 0.617854 | 6_1:-2958028 | Msa0869130:CDS |
| CACGGAACAAGCTTGCGTCA+AGG | 0.619585 | 6_1:+2952975 | None:intergenic |
| CAGCCGGGGTCTACACAACA+AGG | 0.619731 | 6_1:-2954944 | Msa0869130:intron |
| GAAGCCGCAGCTAAAACCGA+TGG | 0.622294 | 6_1:-2953070 | Msa0869130:CDS |
| TATGTCTTTAGATTGGTCAC+CGG | 0.628772 | 6_1:+2953327 | None:intergenic |
| AAGCGGGTAACGATAATCCA+AGG | 0.630177 | 6_1:-2958011 | Msa0869130:CDS |
| GTCACCGGTACGAAAGAGAA+GGG | 0.632116 | 6_1:+2953342 | None:intergenic |
| TTTATGGCCCTCCAGGAACA+GGG | 0.634037 | 6_1:-2954422 | Msa0869130:CDS |
| ACAGCTGAATCAAGGTCACC+AGG | 0.637144 | 6_1:+2953280 | None:intergenic |
| AAGGGAAATAGCGAAACTGA+TGG | 0.642775 | 6_1:-2953038 | Msa0869130:CDS |
| CCTAGAATTTCCCTTGCCTG+GGG | 0.646412 | 6_1:-2953236 | Msa0869130:CDS |
| GTTACAGCCTGTGATCCGAG+TGG | 0.647718 | 6_1:+2953705 | None:intergenic |
| GGCGCCATCGGAGAAAGCGA+CGG | 0.647778 | 6_1:+2958071 | None:intergenic |
| CTGAATCAAGGTCACCAGGA+CGG | 0.653067 | 6_1:+2953284 | None:intergenic |
| TGTAGCAGACCGTATTGATG+AGG | 0.665500 | 6_1:-2953260 | Msa0869130:CDS |
| GCCATCGGAGAAAGCGACGG+TGG | 0.665675 | 6_1:+2958074 | None:intergenic |
| TGGGCCAAGAAGTCCAATAG+GGG | 0.667815 | 6_1:-2953660 | Msa0869130:CDS |
| GATTATGCATTGATGACTGG+AGG | 0.668224 | 6_1:-2953738 | Msa0869130:CDS |
| TCCAGGAACAGGGAAGACAA+TGG | 0.668408 | 6_1:-2954412 | Msa0869130:CDS |
| CCAGGGGTATTTCCCTCTGG+AGG | 0.673340 | 6_1:+2954629 | None:intergenic |
| TGATCCGAGAGTCCTCCAGA+GGG | 0.678628 | 6_1:-2954641 | Msa0869130:CDS |
| TTGATCCGAGAGTCCTCCAG+AGG | 0.688066 | 6_1:-2954642 | Msa0869130:CDS |
| GAGAAAACGTGCCAGACCAG+GGG | 0.697208 | 6_1:+2954613 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATATATATATTTT+CGG | - | chr6_1:2954163-2954182 | Msa0869130:intron | 0.0% |
| !! | ATTATATATTAAATATAAAA+TGG | - | chr6_1:2956880-2956899 | Msa0869130:intron | 0.0% |
| !!! | TATGTTTAATATTTTATTTG+TGG | - | chr6_1:2952987-2953006 | Msa0869130:CDS | 10.0% |
| !! | TACAATAATAAAAATTTGAT+AGG | + | chr6_1:2954614-2954633 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTGTTTTTTTGA+AGG | - | chr6_1:2953011-2953030 | Msa0869130:CDS | 15.0% |
| !! | TAATAACATGCAAATTTATT+TGG | + | chr6_1:2953695-2953714 | None:intergenic | 15.0% |
| !! | ATTAAACTAATAGAACATTA+TGG | + | chr6_1:2954712-2954731 | None:intergenic | 15.0% |
| !!! | AACATGAAACATATTTTTTT+TGG | + | chr6_1:2956485-2956504 | None:intergenic | 15.0% |
| !! | TATAAAAAATCTGAAAAATG+AGG | + | chr6_1:2956616-2956635 | None:intergenic | 15.0% |
| !!! | AAAATATCATTTTATCTAGA+AGG | + | chr6_1:2956993-2957012 | None:intergenic | 15.0% |
| !!! | TTTGTTTTCAATTTAAATTC+AGG | - | chr6_1:2957022-2957041 | Msa0869130:intron | 15.0% |
| !!! | TTGTTTTCAATTTAAATTCA+GGG | - | chr6_1:2957023-2957042 | Msa0869130:intron | 15.0% |
| !! | ATAATAATATATGAAAAGCA+TGG | + | chr6_1:2957217-2957236 | None:intergenic | 15.0% |
| !! | ATTCATTATTATACACATGT+TGG | - | chr6_1:2953762-2953781 | Msa0869130:intron | 20.0% |
| !! | TTCATTATTATACACATGTT+GGG | - | chr6_1:2953763-2953782 | Msa0869130:intron | 20.0% |
| !!! | CTATTTTCTCAAATTATCAA+AGG | + | chr6_1:2953957-2953976 | None:intergenic | 20.0% |
| !!! | TATATTTTCAGACAATGAAA+TGG | + | chr6_1:2954082-2954101 | None:intergenic | 20.0% |
| !!! | ATTAAACCTTTTGAAACTTT+GGG | - | chr6_1:2955029-2955048 | Msa0869130:intron | 20.0% |
| !! | TAAAAAATTTACCTCCAATA+TGG | + | chr6_1:2955409-2955428 | None:intergenic | 20.0% |
| !!! | ATAATTGAGTTTTCAGATTT+GGG | + | chr6_1:2955746-2955765 | None:intergenic | 20.0% |
| !! | TATAAATTGTCCATAAAGTT+TGG | - | chr6_1:2955867-2955886 | Msa0869130:CDS | 20.0% |
| !!! | TTGTATATTCTCTAAAAATG+GGG | + | chr6_1:2955957-2955976 | None:intergenic | 20.0% |
| !!! | GTTGTATATTCTCTAAAAAT+GGG | + | chr6_1:2955958-2955977 | None:intergenic | 20.0% |
| !!! | AGTTGTATATTCTCTAAAAA+TGG | + | chr6_1:2955959-2955978 | None:intergenic | 20.0% |
| !! | AATTAGAACAAGAAGATAAA+TGG | + | chr6_1:2956446-2956465 | None:intergenic | 20.0% |
| !! | TGATCACTTATACTTAATAT+AGG | + | chr6_1:2956573-2956592 | None:intergenic | 20.0% |
| !! | ATATTCCTCTTTATAATTTC+TGG | - | chr6_1:2956635-2956654 | Msa0869130:intron | 20.0% |
| !!! | TCTAAAATCATCTTTCTTAA+AGG | - | chr6_1:2956695-2956714 | Msa0869130:intron | 20.0% |
| !! | ATTGAATTTAGAAAGACAAT+TGG | + | chr6_1:2956738-2956757 | None:intergenic | 20.0% |
| !!! | GCATCTTTTTTTTTTTTGAA+TGG | - | chr6_1:2956848-2956867 | Msa0869130:intron | 20.0% |
| !! | AAAAAAATGATGAGCAAATA+AGG | + | chr6_1:2956956-2956975 | None:intergenic | 20.0% |
| !! | TCATATATTATTATCCAACT+CGG | - | chr6_1:2957223-2957242 | Msa0869130:intron | 20.0% |
| !! | TTATAGTGAAATCTTATTGA+AGG | - | chr6_1:2958030-2958049 | Msa0869130:CDS | 20.0% |
| !! | TCTGACAACTTTCTTTTTAT+TGG | - | chr6_1:2953293-2953312 | Msa0869130:CDS | 25.0% |
| !!! | ACAATTTTACAGCCATTTTT+CGG | + | chr6_1:2953383-2953402 | None:intergenic | 25.0% |
| !! | TATCATCTGAGTTCTAATTA+CGG | + | chr6_1:2953569-2953588 | None:intergenic | 25.0% |
| ! | TGATTAAATGTAACATCTGT+TGG | - | chr6_1:2953980-2953999 | Msa0869130:intron | 25.0% |
| !! | TATTTTCGGTATTAGATAGA+TGG | - | chr6_1:2954177-2954196 | Msa0869130:intron | 25.0% |
| ! | AATAGTTCATCATGAATGAA+TGG | - | chr6_1:2954216-2954235 | Msa0869130:intron | 25.0% |
| !! | TCGTTTGAATTTTATCCAAT+TGG | - | chr6_1:2954300-2954319 | Msa0869130:intron | 25.0% |
| !! | CGTTTGAATTTTATCCAATT+GGG | - | chr6_1:2954301-2954320 | Msa0869130:intron | 25.0% |
| !! | GTTTGAATTTTATCCAATTG+GGG | - | chr6_1:2954302-2954321 | Msa0869130:intron | 25.0% |
| ! | AAAGTCAGAGTTTGAAAATA+CGG | + | chr6_1:2954414-2954433 | None:intergenic | 25.0% |
| ! | ATCAATTACTAACAACTTCA+AGG | - | chr6_1:2954502-2954521 | Msa0869130:CDS | 25.0% |
| ! | AACAATAATGACAATGTTTC+AGG | - | chr6_1:2954568-2954587 | Msa0869130:CDS | 25.0% |
| ! | ACAATAATGACAATGTTTCA+GGG | - | chr6_1:2954569-2954588 | Msa0869130:CDS | 25.0% |
| ! | TAAAAATTTGATAGGCAGTA+TGG | + | chr6_1:2954606-2954625 | None:intergenic | 25.0% |
| !! | TTTTATTGCAAGTACAAGTT+TGG | - | chr6_1:2954783-2954802 | Msa0869130:intron | 25.0% |
| ! | CACATATCTTCAATTGTTTA+AGG | + | chr6_1:2954809-2954828 | None:intergenic | 25.0% |
| !!! | TATTTTGTGTTTTGGTTTTC+CGG | - | chr6_1:2954864-2954883 | Msa0869130:intron | 25.0% |
| !!! | CATTAAACCTTTTGAAACTT+TGG | - | chr6_1:2955028-2955047 | Msa0869130:intron | 25.0% |
| !! | ATTCTCACATTTTTATTGTC+AGG | - | chr6_1:2955085-2955104 | Msa0869130:intron | 25.0% |
| ! | CATAATATATAGTTCGTATC+TGG | + | chr6_1:2955432-2955451 | None:intergenic | 25.0% |
| !! | GTGAAGCATTATATCTTAAT+TGG | - | chr6_1:2955663-2955682 | Msa0869130:CDS | 25.0% |
| !!! | ACTCAATCAATATTTTTGCT+TGG | - | chr6_1:2955693-2955712 | Msa0869130:intron | 25.0% |
| !! | TAATTGAGTTTTCAGATTTG+GGG | + | chr6_1:2955745-2955764 | None:intergenic | 25.0% |
| !! | GATAATTGAGTTTTCAGATT+TGG | + | chr6_1:2955747-2955766 | None:intergenic | 25.0% |
| !! | AAAACTCAATTATCTTTTGC+AGG | - | chr6_1:2955753-2955772 | Msa0869130:intron | 25.0% |
| !! | AAACTCAATTATCTTTTGCA+GGG | - | chr6_1:2955754-2955773 | Msa0869130:intron | 25.0% |
| ! | GAAATAGTCTGATAAATAGA+GGG | + | chr6_1:2955993-2956012 | None:intergenic | 25.0% |
| ! | AGAAATAGTCTGATAAATAG+AGG | + | chr6_1:2955994-2956013 | None:intergenic | 25.0% |
| !! | GGATATGTTGATAGAATATT+GGG | - | chr6_1:2956113-2956132 | Msa0869130:intron | 25.0% |
| !! | ATCTGTTTCAAATAATGGAA+AGG | - | chr6_1:2956235-2956254 | Msa0869130:intron | 25.0% |
| !! | TCTGTTTCAAATAATGGAAA+GGG | - | chr6_1:2956236-2956255 | Msa0869130:intron | 25.0% |
| ! | TGAAAACACAAAATTACATC+AGG | - | chr6_1:2956322-2956341 | Msa0869130:intron | 25.0% |
| ! | TTCAATTTAAATTCAGGGAT+TGG | - | chr6_1:2957028-2957047 | Msa0869130:intron | 25.0% |
| !! | AATATATGAAAAGCATGGAA+TGG | + | chr6_1:2957212-2957231 | None:intergenic | 25.0% |
| ! | AAAAGTAATGAAATTGCATC+AGG | + | chr6_1:2957281-2957300 | None:intergenic | 25.0% |
| !! | CTTTAATCTCTATCTTTTGT+GGG | + | chr6_1:2957675-2957694 | None:intergenic | 25.0% |
| ! | GCATCAACAAAGAATAAAAT+TGG | - | chr6_1:2957861-2957880 | Msa0869130:intron | 25.0% |
| ! | TCATGTGTTACATATAATCA+TGG | + | chr6_1:2958081-2958100 | None:intergenic | 25.0% |
| ! | TTATATGTAACACATGATTC+AGG | - | chr6_1:2958084-2958103 | Msa0869130:CDS | 25.0% |
| ! | TCATGAATTATCATGGTTAA+GGG | + | chr6_1:2958145-2958164 | None:intergenic | 25.0% |
| ! | TTCATGAATTATCATGGTTA+AGG | + | chr6_1:2958146-2958165 | None:intergenic | 25.0% |
| ! | AGATTTGTTTGAGAGCTTTA+AGG | + | chr6_1:2952844-2952863 | None:intergenic | 30.0% |
| TGCTTCATCATATGCTAAAA+AGG | - | chr6_1:2952865-2952884 | Msa0869130:intron | 30.0% | |
| TGAGATATTGAAGAAACAAG+AGG | - | chr6_1:2953038-2953057 | Msa0869130:CDS | 30.0% | |
| ! | TAATCGAATGAAAGCACAAT+TGG | - | chr6_1:2953101-2953120 | Msa0869130:CDS | 30.0% |
| ACTGACAACATAAGAATTTC+TGG | + | chr6_1:2953143-2953162 | None:intergenic | 30.0% | |
| ! | AGCATTTTTGTATGCGAAAT+AGG | - | chr6_1:2953227-2953246 | Msa0869130:CDS | 30.0% |
| AAGTAGTAATCGCATGTTAT+CGG | - | chr6_1:2953541-2953560 | Msa0869130:intron | 30.0% | |
| ! | ATCATCTGAGTTCTAATTAC+GGG | + | chr6_1:2953568-2953587 | None:intergenic | 30.0% |
| ACTCAGATGATAAAAGATTG+CGG | - | chr6_1:2953577-2953596 | Msa0869130:intron | 30.0% | |
| GGAGACATTTAATATGATCA+GGG | - | chr6_1:2953598-2953617 | Msa0869130:intron | 30.0% | |
| GAGACATTTAATATGATCAG+GGG | - | chr6_1:2953599-2953618 | Msa0869130:intron | 30.0% | |
| !!! | TATGTAGTTTTGTAGCTTGA+AGG | - | chr6_1:2953864-2953883 | Msa0869130:intron | 30.0% |
| CATTCATGATGAACTATTCA+AGG | + | chr6_1:2954214-2954233 | None:intergenic | 30.0% | |
| TTTACATGAGTCTGTATCAT+GGG | - | chr6_1:2954250-2954269 | Msa0869130:intron | 30.0% | |
| GACAGTAATGTCCTAATTAT+GGG | + | chr6_1:2954344-2954363 | None:intergenic | 30.0% | |
| AGACAGTAATGTCCTAATTA+TGG | + | chr6_1:2954345-2954364 | None:intergenic | 30.0% | |
| TAATTAGGACATTACTGTCT+AGG | - | chr6_1:2954345-2954364 | Msa0869130:intron | 30.0% | |
| CAATAATGACAATGTTTCAG+GGG | - | chr6_1:2954570-2954589 | Msa0869130:CDS | 30.0% | |
| ! | TCTGTGTGTATTTTGTGTTT+TGG | - | chr6_1:2954856-2954875 | Msa0869130:intron | 30.0% |
| AAGAAAACCAATTGATAAGC+CGG | + | chr6_1:2954886-2954905 | None:intergenic | 30.0% | |
| ATATGACGAAGAAAAAAAGC+TGG | - | chr6_1:2954928-2954947 | Msa0869130:intron | 30.0% | |
| CAAAAACCCAAAGTTTCAAA+AGG | + | chr6_1:2955038-2955057 | None:intergenic | 30.0% | |
| AAAATGAGTACCATAGAGTA+AGG | - | chr6_1:2955111-2955130 | Msa0869130:intron | 30.0% | |
| GTGATTTAGATCGAGAAAAA+TGG | - | chr6_1:2955357-2955376 | Msa0869130:intron | 30.0% | |
| AATACTACCTTTGACCATAT+TGG | - | chr6_1:2955392-2955411 | Msa0869130:intron | 30.0% | |
| !! | CATCGTGAATTCGTTTTTAA+AGG | + | chr6_1:2955514-2955533 | None:intergenic | 30.0% |
| ! | TCAGCATAATTGTAGTTTGT+TGG | - | chr6_1:2955592-2955611 | Msa0869130:CDS | 30.0% |
| !! | AATCAATATTTTTGCTTGGC+TGG | - | chr6_1:2955697-2955716 | Msa0869130:intron | 30.0% |
| !! | ATCAATATTTTTGCTTGGCT+GGG | - | chr6_1:2955698-2955717 | Msa0869130:intron | 30.0% |
| ! | AACTCAATTATCTTTTGCAG+GGG | - | chr6_1:2955755-2955774 | Msa0869130:intron | 30.0% |
| CTTATTACGATCTGTTAGAA+TGG | + | chr6_1:2955790-2955809 | None:intergenic | 30.0% | |
| TCTAACAGATCGTAATAAGT+TGG | - | chr6_1:2955791-2955810 | Msa0869130:CDS | 30.0% | |
| ATTCAGATTGTACCTAATGT+AGG | - | chr6_1:2956069-2956088 | Msa0869130:intron | 30.0% | |
| TTCAGATTGTACCTAATGTA+GGG | - | chr6_1:2956070-2956089 | Msa0869130:intron | 30.0% | |
| ! | GGGATATGTTGATAGAATAT+TGG | - | chr6_1:2956112-2956131 | Msa0869130:intron | 30.0% |
| ! | CCATTATTTGAAACAGATTC+TGG | + | chr6_1:2956233-2956252 | None:intergenic | 30.0% |
| CCAGAATCTGTTTCAAATAA+TGG | - | chr6_1:2956230-2956249 | Msa0869130:intron | 30.0% | |
| !! | TCAAATAATGGAAAGGGTTT+TGG | - | chr6_1:2956242-2956261 | Msa0869130:intron | 30.0% |
| TCAATTCTCTTACTAAGAGA+AGG | + | chr6_1:2956284-2956303 | None:intergenic | 30.0% | |
| ! | TAAAAAAGCACGTTTCTGAA+TGG | + | chr6_1:2956350-2956369 | None:intergenic | 30.0% |
| !!! | TTCAGAAACGTGCTTTTTTA+TGG | - | chr6_1:2956350-2956369 | Msa0869130:intron | 30.0% |
| ! | AATGCAAAGTTCTTTTTCTG+TGG | - | chr6_1:2956755-2956774 | Msa0869130:intron | 30.0% |
| !! | TGCAACTTTTACTCACTTTT+TGG | + | chr6_1:2957320-2957339 | None:intergenic | 30.0% |
| TGAGAATTGTCTGAGTAAAT+TGG | - | chr6_1:2957363-2957382 | Msa0869130:intron | 30.0% | |
| GAGAATTGTCTGAGTAAATT+GGG | - | chr6_1:2957364-2957383 | Msa0869130:intron | 30.0% | |
| ! | CCTTTAATCTCTATCTTTTG+TGG | + | chr6_1:2957676-2957695 | None:intergenic | 30.0% |
| CCACAAAAGATAGAGATTAA+AGG | - | chr6_1:2957673-2957692 | Msa0869130:intron | 30.0% | |
| ATTGAGCGATGATATCATAA+AGG | - | chr6_1:2957696-2957715 | Msa0869130:CDS | 30.0% | |
| CCTTATAATCTACAACTTCA+CGG | + | chr6_1:2957834-2957853 | None:intergenic | 30.0% | |
| CCATGATAATTCATGAACTA+CGG | - | chr6_1:2958149-2958168 | Msa0869130:five_prime_UTR | 30.0% | |
| TGTGAAGAATGGTGAAGAAA+AGG | + | chr6_1:2952633-2952652 | None:intergenic | 35.0% | |
| ! | GAAGAGGTTTTTGTGAAGAA+TGG | + | chr6_1:2952644-2952663 | None:intergenic | 35.0% |
| CACAAAAACCTCTTCTTCAA+TGG | - | chr6_1:2952649-2952668 | Msa0869130:three_prime_UTR | 35.0% | |
| TGAGAATAAACCGGATAAAG+TGG | + | chr6_1:2952681-2952700 | None:intergenic | 35.0% | |
| TGAAGAAACAAGAGGAAACA+AGG | - | chr6_1:2953046-2953065 | Msa0869130:CDS | 35.0% | |
| AGAGACAGTTATCCGAAAAA+TGG | - | chr6_1:2953368-2953387 | Msa0869130:CDS | 35.0% | |
| CATAAGTAGAACTCAAGAGA+TGG | - | chr6_1:2953416-2953435 | Msa0869130:intron | 35.0% | |
| TGTAGAGACAATTGATATGC+TGG | - | chr6_1:2953447-2953466 | Msa0869130:intron | 35.0% | |
| GTAGAGACAATTGATATGCT+GGG | - | chr6_1:2953448-2953467 | Msa0869130:intron | 35.0% | |
| CGGAGACATTTAATATGATC+AGG | - | chr6_1:2953597-2953616 | Msa0869130:intron | 35.0% | |
| ! | TCAAAGGTGTATGCATTTCT+GGG | + | chr6_1:2953941-2953960 | None:intergenic | 35.0% |
| ! | ATCAAAGGTGTATGCATTTC+TGG | + | chr6_1:2953942-2953961 | None:intergenic | 35.0% |
| CTTTACATGAGTCTGTATCA+TGG | - | chr6_1:2954249-2954268 | Msa0869130:intron | 35.0% | |
| TTACATGAGTCTGTATCATG+GGG | - | chr6_1:2954251-2954270 | Msa0869130:intron | 35.0% | |
| GTGTTTCATCTCCCATAATT+AGG | - | chr6_1:2954330-2954349 | Msa0869130:intron | 35.0% | |
| CAGAGTTTGAAAATACGGTT+GGG | + | chr6_1:2954409-2954428 | None:intergenic | 35.0% | |
| TCAGAGTTTGAAAATACGGT+TGG | + | chr6_1:2954410-2954429 | None:intergenic | 35.0% | |
| ATTTGATAGGCAGTATGGAA+AGG | + | chr6_1:2954601-2954620 | None:intergenic | 35.0% | |
| ATTATGGCGTAATTTGATCC+AGG | + | chr6_1:2954696-2954715 | None:intergenic | 35.0% | |
| ACACAAAATACACACAGAAC+AGG | + | chr6_1:2954854-2954873 | None:intergenic | 35.0% | |
| !!! | GGCTTATCAATTGGTTTTCT+TGG | - | chr6_1:2954885-2954904 | Msa0869130:intron | 35.0% |
| !!! | TATCAATTGGTTTTCTTGGC+AGG | - | chr6_1:2954889-2954908 | Msa0869130:intron | 35.0% |
| TTTCTTGGCAGGAAAAACAA+AGG | - | chr6_1:2954900-2954919 | Msa0869130:intron | 35.0% | |
| !! | TTTTGTTTGTGCCTGATGTT+GGG | + | chr6_1:2954954-2954973 | None:intergenic | 35.0% |
| !! | ATTTTGTTTGTGCCTGATGT+TGG | + | chr6_1:2954955-2954974 | None:intergenic | 35.0% |
| ATCTCAGATGGCTAAATATG+AGG | - | chr6_1:2954973-2954992 | Msa0869130:CDS | 35.0% | |
| ! | CTTGCAATTTTACAAGCTCT+TGG | + | chr6_1:2955139-2955158 | None:intergenic | 35.0% |
| AGAAGATTCATCAATCAGAC+TGG | - | chr6_1:2955157-2955176 | Msa0869130:intron | 35.0% | |
| ACTACGAAAGCAAACTATAG+AGG | - | chr6_1:2955217-2955236 | Msa0869130:intron | 35.0% | |
| AAAGCAAACTATAGAGGAGA+AGG | - | chr6_1:2955223-2955242 | Msa0869130:intron | 35.0% | |
| TTTACCTCCAATATGGTCAA+AGG | + | chr6_1:2955402-2955421 | None:intergenic | 35.0% | |
| ! | CGAATTCACGATGATTTTTG+TGG | - | chr6_1:2955521-2955540 | Msa0869130:CDS | 35.0% |
| ! | ACTCAATTATCTTTTGCAGG+GGG | - | chr6_1:2955756-2955775 | Msa0869130:intron | 35.0% |
| !! | AATAAGTTGGTCGTAACAGT+TGG | - | chr6_1:2955804-2955823 | Msa0869130:CDS | 35.0% |
| GTAGCTCATTCCAAACTTTA+TGG | + | chr6_1:2955880-2955899 | None:intergenic | 35.0% | |
| TTTGACACGTTGACAAAACA+AGG | + | chr6_1:2956513-2956532 | None:intergenic | 35.0% | |
| TGTCAACGTGTCAAATAAGT+AGG | - | chr6_1:2956518-2956537 | Msa0869130:intron | 35.0% | |
| GTCAACGTGTCAAATAAGTA+GGG | - | chr6_1:2956519-2956538 | Msa0869130:intron | 35.0% | |
| GTGTCAAATAAGTAGGGAAT+TGG | - | chr6_1:2956525-2956544 | Msa0869130:intron | 35.0% | |
| GTCAGCCAGAAATTATAAAG+AGG | + | chr6_1:2956643-2956662 | None:intergenic | 35.0% | |
| ! | TGCAGTTATTAGCTTACAAG+TGG | - | chr6_1:2956783-2956802 | Msa0869130:intron | 35.0% |
| ! | GCAGTTATTAGCTTACAAGT+GGG | - | chr6_1:2956784-2956803 | Msa0869130:intron | 35.0% |
| TTCAAGGAGATTTCTCTTGT+AGG | + | chr6_1:2956914-2956933 | None:intergenic | 35.0% | |
| AATGTTCAGGATACACTTCA+AGG | + | chr6_1:2956930-2956949 | None:intergenic | 35.0% | |
| GCAAATAAGGTCAAATGTTC+AGG | + | chr6_1:2956943-2956962 | None:intergenic | 35.0% | |
| ! | TTGGATTATGCATTGATGAC+TGG | - | chr6_1:2957047-2957066 | Msa0869130:intron | 35.0% |
| AGATACACGAGTTGTTTGAT+TGG | - | chr6_1:2957108-2957127 | Msa0869130:intron | 35.0% | |
| GATACACGAGTTGTTTGATT+GGG | - | chr6_1:2957109-2957128 | Msa0869130:intron | 35.0% | |
| AAAAAGCAGTAAACCCCTAT+TGG | + | chr6_1:2957144-2957163 | None:intergenic | 35.0% | |
| ! | GTAAATTGGGTGAATTTTGC+AGG | - | chr6_1:2957377-2957396 | Msa0869130:intron | 35.0% |
| ! | TATGTCTTTAGATTGGTCAC+CGG | + | chr6_1:2957464-2957483 | None:intergenic | 35.0% |
| CAAGGACTATGTCTTTAGAT+TGG | + | chr6_1:2957471-2957490 | None:intergenic | 35.0% | |
| !! | ATTCTAGGACCTCATCAATA+CGG | + | chr6_1:2957540-2957559 | None:intergenic | 35.0% |
| CCGTGAAGTTGTAGATTATA+AGG | - | chr6_1:2957831-2957850 | Msa0869130:intron | 35.0% | |
| TAAAGCTTAGTTAGTGCAAG+AGG | - | chr6_1:2957894-2957913 | Msa0869130:intron | 35.0% | |
| TGTCAGCAATCTTCTAATGT+AGG | - | chr6_1:2957939-2957958 | Msa0869130:CDS | 35.0% | |
| GTCAGCAATCTTCTAATGTA+GGG | - | chr6_1:2957940-2957959 | Msa0869130:CDS | 35.0% | |
| ! | GATAAAAGCATGCTCAGAAT+AGG | + | chr6_1:2957970-2957989 | None:intergenic | 35.0% |
| ATTGTTTGTCCCTGATTGAT+GGG | - | chr6_1:2957990-2958009 | Msa0869130:CDS | 35.0% | |
| CAAAATCTTCCCATCAATCA+GGG | + | chr6_1:2958002-2958021 | None:intergenic | 35.0% | |
| CCGTAGTTCATGAATTATCA+TGG | + | chr6_1:2958152-2958171 | None:intergenic | 35.0% | |
| ! | TGGTGAAGAAAAGGTTCTGA+GGG | + | chr6_1:2952624-2952643 | None:intergenic | 40.0% |
| ATGGTGAAGAAAAGGTTCTG+AGG | + | chr6_1:2952625-2952644 | None:intergenic | 40.0% | |
| ATGGCGAAAACCACTTTATC+CGG | - | chr6_1:2952668-2952687 | Msa0869130:three_prime_UTR | 40.0% | |
| GGTTAAGGCTGAGAATAAAC+CGG | + | chr6_1:2952690-2952709 | None:intergenic | 40.0% | |
| TGCTGAAGATGAAGAAGGAA+TGG | + | chr6_1:2952741-2952760 | None:intergenic | 40.0% | |
| ! | AACCGATTCATCTTCGAAAG+CGG | - | chr6_1:2952760-2952779 | Msa0869130:three_prime_UTR | 40.0% |
| GATCCTGAACCTCTTGAAAA+AGG | - | chr6_1:2952818-2952837 | Msa0869130:intron | 40.0% | |
| !!! | GCTTTAAGGCCTTTTTCAAG+AGG | + | chr6_1:2952830-2952849 | None:intergenic | 40.0% |
| !! | TGCTAAAAAGGTACTGACAC+CGG | - | chr6_1:2952877-2952896 | Msa0869130:intron | 40.0% |
| ACACATGTGATTACTGTCAC+TGG | + | chr6_1:2952923-2952942 | None:intergenic | 40.0% | |
| CGTAAGTAGAGCTCAAATTG+CGG | - | chr6_1:2953165-2953184 | Msa0869130:CDS | 40.0% | |
| TTAGTAGTGTGCGTGAGTTT+CGG | - | chr6_1:2953645-2953664 | Msa0869130:CDS | 40.0% | |
| CAGAGAAGATAGAGTTTGAG+AGG | - | chr6_1:2953836-2953855 | Msa0869130:intron | 40.0% | |
| TTGTAGCTTGAAGGTTTGTG+TGG | - | chr6_1:2953873-2953892 | Msa0869130:intron | 40.0% | |
| TGTAGCTTGAAGGTTTGTGT+GGG | - | chr6_1:2953874-2953893 | Msa0869130:intron | 40.0% | |
| TTTGAGTGTCCAAAACATGC+CGG | + | chr6_1:2953903-2953922 | None:intergenic | 40.0% | |
| ! | CTTCATATTGAAGGTGTGTC+TGG | + | chr6_1:2954032-2954051 | None:intergenic | 40.0% |
| ! | GCATTGGCACTTCATATTGA+AGG | + | chr6_1:2954041-2954060 | None:intergenic | 40.0% |
| TGAAACACATACACCCCAAT+TGG | + | chr6_1:2954318-2954337 | None:intergenic | 40.0% | |
| TCCTTAATTCCTTCAAACCC+TGG | - | chr6_1:2954438-2954457 | Msa0869130:CDS | 40.0% | |
| TCCAGGGTTTGAAGGAATTA+AGG | + | chr6_1:2954442-2954461 | None:intergenic | 40.0% | |
| ! | TATGAAGCACTTACAGTCCA+GGG | + | chr6_1:2954458-2954477 | None:intergenic | 40.0% |
| ! | AACAACTTCAAGGTACTCGT+AGG | - | chr6_1:2954512-2954531 | Msa0869130:CDS | 40.0% |
| AACAGAAGACTAACTCTAGC+TGG | - | chr6_1:2954535-2954554 | Msa0869130:CDS | 40.0% | |
| ! | TGGTTTTCCGGCTTATCAAT+TGG | - | chr6_1:2954876-2954895 | Msa0869130:intron | 40.0% |
| GGCACAAACAAAATCTCAGA+TGG | - | chr6_1:2954961-2954980 | Msa0869130:CDS | 40.0% | |
| GGCTAAATATGAGGATGAGT+TGG | - | chr6_1:2954982-2955001 | Msa0869130:CDS | 40.0% | |
| ! | AATATGAGGATGAGTTGGCA+AGG | - | chr6_1:2954987-2955006 | Msa0869130:CDS | 40.0% |
| ACAGCACTTGCAAAAGCAAA+AGG | - | chr6_1:2955275-2955294 | Msa0869130:intron | 40.0% | |
| CAGCACTTGCAAAAGCAAAA+GGG | - | chr6_1:2955276-2955295 | Msa0869130:intron | 40.0% | |
| CGAAAAACGAAGAGATTGAC+AGG | - | chr6_1:2955315-2955334 | Msa0869130:intron | 40.0% | |
| AGGAGAAACCAACTTGAGAA+GGG | - | chr6_1:2955335-2955354 | Msa0869130:intron | 40.0% | |
| CTAAATCACCCTTCTCAAGT+TGG | + | chr6_1:2955346-2955365 | None:intergenic | 40.0% | |
| ACTACCTTTGACCATATTGG+AGG | - | chr6_1:2955395-2955414 | Msa0869130:CDS | 40.0% | |
| ! | GAGTTTTCAGATTTGGGGAT+TGG | + | chr6_1:2955740-2955759 | None:intergenic | 40.0% |
| GGAATGAGCTACTATAAACG+AGG | - | chr6_1:2955888-2955907 | Msa0869130:intron | 40.0% | |
| TGAGCTACTATAAACGAGGA+AGG | - | chr6_1:2955892-2955911 | Msa0869130:intron | 40.0% | |
| CTACTATAAACGAGGAAGGA+GGG | - | chr6_1:2955896-2955915 | Msa0869130:intron | 40.0% | |
| !!! | GGTCGAGTGTTATTTTTGCA+TGG | - | chr6_1:2955927-2955946 | Msa0869130:intron | 40.0% |
| GATTGTACCTAATGTAGGGA+AGG | - | chr6_1:2956074-2956093 | Msa0869130:intron | 40.0% | |
| TGGTTTAGCAAGTCGAGAAA+GGG | + | chr6_1:2956213-2956232 | None:intergenic | 40.0% | |
| TAGTAAGAGAATTGAGCAGC+TGG | - | chr6_1:2956289-2956308 | Msa0869130:intron | 40.0% | |
| ! | CAGAGAGTTGGCTTACAAAT+CGG | - | chr6_1:2956403-2956422 | Msa0869130:intron | 40.0% |
| !! | AATTTCTGGCTGACAGTCTA+AGG | - | chr6_1:2956649-2956668 | Msa0869130:intron | 40.0% |
| AACAGCAATAACCAGAAGCA+TGG | + | chr6_1:2956819-2956838 | None:intergenic | 40.0% | |
| ! | GATTATGCATTGATGACTGG+AGG | - | chr6_1:2957050-2957069 | Msa0869130:intron | 40.0% |
| TAAACCCCTATTGGACTTCT+TGG | + | chr6_1:2957135-2957154 | None:intergenic | 40.0% | |
| ATTATCCAACTCGGTTCTTG+TGG | - | chr6_1:2957232-2957251 | Msa0869130:intron | 40.0% | |
| ! | AATTGGGTGAATTTTGCAGG+CGG | - | chr6_1:2957380-2957399 | Msa0869130:intron | 40.0% |
| CAAGCTGGATCAAGAAAATC+TGG | - | chr6_1:2957625-2957644 | Msa0869130:intron | 40.0% | |
| !!! | AAATCCATCGGTTTTAGCTG+CGG | + | chr6_1:2957725-2957744 | None:intergenic | 40.0% |
| !! | GCTAAAACCGATGGATTTTC+CGG | - | chr6_1:2957727-2957746 | Msa0869130:CDS | 40.0% |
| AAGGGAAATAGCGAAACTGA+TGG | - | chr6_1:2957750-2957769 | Msa0869130:CDS | 40.0% | |
| CATTGTTTGTCCCTGATTGA+TGG | - | chr6_1:2957989-2958008 | Msa0869130:CDS | 40.0% | |
| CCAAAATCTTCCCATCAATC+AGG | + | chr6_1:2958003-2958022 | None:intergenic | 40.0% | |
| ! | CCTGATTGATGGGAAGATTT+TGG | - | chr6_1:2958000-2958019 | Msa0869130:CDS | 40.0% |
| TTCATGAACTACGGTGATTG+AGG | - | chr6_1:2958158-2958177 | Msa0869130:five_prime_UTR | 40.0% | |
| ! | GGTTTTCGCCATTGAAGAAG+AGG | + | chr6_1:2952660-2952679 | None:intergenic | 45.0% |
| TCGGTTGCTGAAGATGAAGA+AGG | + | chr6_1:2952746-2952765 | None:intergenic | 45.0% | |
| ! | ACCGATTCATCTTCGAAAGC+GGG | - | chr6_1:2952761-2952780 | Msa0869130:three_prime_UTR | 45.0% |
| ACCCGCTTTCGAAGATGAAT+CGG | + | chr6_1:2952765-2952784 | None:intergenic | 45.0% | |
| AAGCGGGTAACGATAATCCA+AGG | - | chr6_1:2952777-2952796 | Msa0869130:three_prime_UTR | 45.0% | |
| !! | AATCCAAGGAGTGCTTCTTC+TGG | - | chr6_1:2952791-2952810 | Msa0869130:intron | 45.0% |
| !! | AATCCAGAAGAAGCACTCCT+TGG | + | chr6_1:2952797-2952816 | None:intergenic | 45.0% |
| !!! | AGGCCTTTTTCAAGAGGTTC+AGG | + | chr6_1:2952824-2952843 | None:intergenic | 45.0% |
| GGAAACAAGGCAAGCTGAAT+TGG | - | chr6_1:2953059-2953078 | Msa0869130:CDS | 45.0% | |
| CGGAGACATTTGATATGTCG+AGG | - | chr6_1:2953185-2953204 | Msa0869130:CDS | 45.0% | |
| ! | AGGTGTATGCATTTCTGGGT+CGG | + | chr6_1:2953937-2953956 | None:intergenic | 45.0% |
| TGTCAGATGCAATGTGGCAT+TGG | + | chr6_1:2954057-2954076 | None:intergenic | 45.0% | |
| ! | ATGGAGTGTCAGATGCAATG+TGG | + | chr6_1:2954063-2954082 | None:intergenic | 45.0% |
| TTTCCTCAGCGTGTTGAAGA+CGG | - | chr6_1:2954120-2954139 | Msa0869130:intron | 45.0% | |
| ACTTACAGTCCAGGGTTTGA+AGG | + | chr6_1:2954450-2954469 | None:intergenic | 45.0% | |
| ! | CTATGAAGCACTTACAGTCC+AGG | + | chr6_1:2954459-2954478 | None:intergenic | 45.0% |
| CTGGACTGTAAGTGCTTCAT+AGG | - | chr6_1:2954457-2954476 | Msa0869130:CDS | 45.0% | |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr6_1:2954662-2954681 | Msa0869130:CDS | 45.0% |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr6_1:2954663-2954682 | Msa0869130:CDS | 45.0% |
| ACACAGAACAGGAGCAAAGA+AGG | + | chr6_1:2954843-2954862 | None:intergenic | 45.0% | |
| AAAAAAGCTGGCCCAACATC+AGG | - | chr6_1:2954940-2954959 | Msa0869130:intron | 45.0% | |
| GCTCTTGGTTCCTTACTCTA+TGG | + | chr6_1:2955124-2955143 | None:intergenic | 45.0% | |
| CAGGAGAAACCAACTTGAGA+AGG | - | chr6_1:2955334-2955353 | Msa0869130:intron | 45.0% | |
| ! | TTCAGATTTGGGGATTGGTG+TGG | + | chr6_1:2955735-2955754 | None:intergenic | 45.0% |
| ! | AAGTTGGTCGTAACAGTTGG+TGG | - | chr6_1:2955807-2955826 | Msa0869130:CDS | 45.0% |
| ! | ATACCTTGTTGTGTAGACCC+CGG | + | chr6_1:2955850-2955869 | None:intergenic | 45.0% |
| GCTACTATAAACGAGGAAGG+AGG | - | chr6_1:2955895-2955914 | Msa0869130:intron | 45.0% | |
| CGAGGAAGGAGGGAAAAAAT+TGG | - | chr6_1:2955906-2955925 | Msa0869130:intron | 45.0% | |
| !!! | AAGTCGAGAAAGGGTGCTTT+TGG | + | chr6_1:2956204-2956223 | None:intergenic | 45.0% |
| CTGGTTTAGCAAGTCGAGAA+AGG | + | chr6_1:2956214-2956233 | None:intergenic | 45.0% | |
| CGATTTGTAAGCCAACTCTC+TGG | + | chr6_1:2956405-2956424 | None:intergenic | 45.0% | |
| GGTATTCAGTACCATGCTTC+TGG | - | chr6_1:2956805-2956824 | Msa0869130:intron | 45.0% | |
| ATTGGGCCAAGAAGTCCAAT+AGG | - | chr6_1:2957126-2957145 | Msa0869130:intron | 45.0% | |
| TTGGGCCAAGAAGTCCAATA+GGG | - | chr6_1:2957127-2957146 | Msa0869130:intron | 45.0% | |
| AATGCCCTTCTCTTTCGTAC+CGG | - | chr6_1:2957442-2957461 | Msa0869130:intron | 45.0% | |
| ! | TGTAGCAGACCGTATTGATG+AGG | - | chr6_1:2957528-2957547 | Msa0869130:intron | 45.0% |
| TCCTAGAATTTCCCTTGCCT+GGG | - | chr6_1:2957551-2957570 | Msa0869130:intron | 45.0% | |
| !! | AAACCGATGGATTTTCCGGA+AGG | - | chr6_1:2957731-2957750 | Msa0869130:CDS | 45.0% |
| !! | AACCGATGGATTTTCCGGAA+GGG | - | chr6_1:2957732-2957751 | Msa0869130:CDS | 45.0% |
| TTCCCTTCCGGAAAATCCAT+CGG | + | chr6_1:2957737-2957756 | None:intergenic | 45.0% | |
| ! | CAGTTTCGCTATTTCCCTTC+CGG | + | chr6_1:2957749-2957768 | None:intergenic | 45.0% |
| ! | ACAGTTGTCGCTTCCATACA+CGG | + | chr6_1:2957791-2957810 | None:intergenic | 45.0% |
| TGAAGAAGGAATGGCGCCAT+CGG | + | chr6_1:2952732-2952751 | None:intergenic | 50.0% | |
| AGACATGTCAGTGTCGTGTC+CGG | + | chr6_1:2952899-2952918 | None:intergenic | 50.0% | |
| GCAAGCTGAATTGGCTGCTA+AGG | - | chr6_1:2953068-2953087 | Msa0869130:CDS | 50.0% | |
| TGAAGGTTTGTGTGGGTGTC+CGG | - | chr6_1:2953881-2953900 | Msa0869130:intron | 50.0% | |
| ! | GGTGTATGCATTTCTGGGTC+GGG | + | chr6_1:2953936-2953955 | None:intergenic | 50.0% |
| TGTCCGACTCATGCCATTGT+CGG | - | chr6_1:2954003-2954022 | Msa0869130:intron | 50.0% | |
| TGTCCGACAATGGCATGAGT+CGG | + | chr6_1:2954009-2954028 | None:intergenic | 50.0% | |
| TTCCTCAGCGTGTTGAAGAC+GGG | - | chr6_1:2954121-2954140 | Msa0869130:intron | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr6_1:2954664-2954683 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr6_1:2954661-2954680 | Msa0869130:CDS | 50.0% |
| CAACCCCACTTAGTGGGAAA+AGG | + | chr6_1:2954669-2954688 | None:intergenic | 50.0% | |
| ! | CTTTTCCCACTAAGTGGGGT+TGG | - | chr6_1:2954667-2954686 | Msa0869130:CDS | 50.0% |
| ! | AGGATGAGTTGGCAAGGAAG+AGG | - | chr6_1:2954993-2955012 | Msa0869130:CDS | 50.0% |
| ! | CCTAATGTAGGGAAGGTGCA+CGG | - | chr6_1:2956081-2956100 | Msa0869130:intron | 50.0% |
| ! | CTAATGTAGGGAAGGTGCAC+GGG | - | chr6_1:2956082-2956101 | Msa0869130:intron | 50.0% |
| ! | GGAAGGTGCACGGGTTATTT+GGG | - | chr6_1:2956091-2956110 | Msa0869130:intron | 50.0% |
| ! | GAAGGTGCACGGGTTATTTG+GGG | - | chr6_1:2956092-2956111 | Msa0869130:intron | 50.0% |
| GAGGACTCTCGGATCAATGA+TGG | + | chr6_1:2956143-2956162 | None:intergenic | 50.0% | |
| ! | ATTTCCCTCTGGAGGACTCT+CGG | + | chr6_1:2956154-2956173 | None:intergenic | 50.0% |
| !!! | GTGCTTTTTTATGGCCCTCC+AGG | - | chr6_1:2956359-2956378 | Msa0869130:intron | 50.0% |
| ! | TTTTATGGCCCTCCAGGAAC+AGG | - | chr6_1:2956365-2956384 | Msa0869130:intron | 50.0% |
| TTTATGGCCCTCCAGGAACA+GGG | - | chr6_1:2956366-2956385 | Msa0869130:intron | 50.0% | |
| TTGTCTTCCCTGTTCCTGGA+GGG | + | chr6_1:2956376-2956395 | None:intergenic | 50.0% | |
| ATTGTCTTCCCTGTTCCTGG+AGG | + | chr6_1:2956377-2956396 | None:intergenic | 50.0% | |
| TCCAGGAACAGGGAAGACAA+TGG | - | chr6_1:2956376-2956395 | Msa0869130:intron | 50.0% | |
| TGGGCCAAGAAGTCCAATAG+GGG | - | chr6_1:2957128-2957147 | Msa0869130:intron | 50.0% | |
| TGATGCCACAAGAACCGAGT+TGG | + | chr6_1:2957240-2957259 | None:intergenic | 50.0% | |
| GTCACCGGTACGAAAGAGAA+GGG | + | chr6_1:2957449-2957468 | None:intergenic | 50.0% | |
| CTGAATCAAGGTCACCAGGA+CGG | + | chr6_1:2957507-2957526 | None:intergenic | 50.0% | |
| ACAGCTGAATCAAGGTCACC+AGG | + | chr6_1:2957511-2957530 | None:intergenic | 50.0% | |
| GGTCTGCTACAGCTGAATCA+AGG | + | chr6_1:2957519-2957538 | None:intergenic | 50.0% | |
| GTCCTAGAATTTCCCTTGCC+TGG | - | chr6_1:2957550-2957569 | Msa0869130:intron | 50.0% | |
| CCTAGAATTTCCCTTGCCTG+GGG | - | chr6_1:2957552-2957571 | Msa0869130:intron | 50.0% | |
| TTAAAACGCTCCTCTTCCCC+AGG | + | chr6_1:2957571-2957590 | None:intergenic | 50.0% | |
| TGTGCGTGAGTTTCGGCCTT+CGG | - | chr6_1:2953652-2953671 | Msa0869130:CDS | 55.0% | |
| TTCAAAGAGCCTAGCCCCGA+AGG | + | chr6_1:2953671-2953690 | None:intergenic | 55.0% | |
| ! | TGTGGGTGTCCGGCATGTTT+TGG | - | chr6_1:2953891-2953910 | Msa0869130:intron | 55.0% |
| GTGTGTCTGGTGTCCGACAA+TGG | + | chr6_1:2954019-2954038 | None:intergenic | 55.0% | |
| TCCTCAGCGTGTTGAAGACG+GGG | - | chr6_1:2954122-2954141 | Msa0869130:intron | 55.0% | |
| GGTAGCCAACCCCACTTAGT+GGG | + | chr6_1:2954675-2954694 | None:intergenic | 55.0% | |
| AGGTAGCCAACCCCACTTAG+TGG | + | chr6_1:2954676-2954695 | None:intergenic | 55.0% | |
| !! | ACTAAGTGGGGTTGGCTACC+TGG | - | chr6_1:2954675-2954694 | Msa0869130:CDS | 55.0% |
| GTTGGCAAGGAAGAGGATGC+AGG | - | chr6_1:2955000-2955019 | Msa0869130:CDS | 55.0% | |
| !! | AGTTGGTGGAGTGACTGCTC+TGG | - | chr6_1:2955821-2955840 | Msa0869130:CDS | 55.0% |
| CCGTGCACCTTCCCTACATT+AGG | + | chr6_1:2956084-2956103 | None:intergenic | 55.0% | |
| ! | GGGAAGGTGCACGGGTTATT+TGG | - | chr6_1:2956090-2956109 | Msa0869130:intron | 55.0% |
| TTGATCCGAGAGTCCTCCAG+AGG | - | chr6_1:2956146-2956165 | Msa0869130:intron | 55.0% | |
| TGATCCGAGAGTCCTCCAGA+GGG | - | chr6_1:2956147-2956166 | Msa0869130:intron | 55.0% | |
| !! | AGACCAGGGGTATTTCCCTC+TGG | + | chr6_1:2956165-2956184 | None:intergenic | 55.0% |
| AGAGGGAAATACCCCTGGTC+TGG | - | chr6_1:2956164-2956183 | Msa0869130:intron | 55.0% | |
| GAGAAAACGTGCCAGACCAG+GGG | + | chr6_1:2956178-2956197 | None:intergenic | 55.0% | |
| CGAGAAAACGTGCCAGACCA+GGG | + | chr6_1:2956179-2956198 | None:intergenic | 55.0% | |
| TCGAGAAAACGTGCCAGACC+AGG | + | chr6_1:2956180-2956199 | None:intergenic | 55.0% | |
| GCCATTGTCTTCCCTGTTCC+TGG | + | chr6_1:2956380-2956399 | None:intergenic | 55.0% | |
| GACAATGGCTGCCAGAGAGT+TGG | - | chr6_1:2956391-2956410 | Msa0869130:intron | 55.0% | |
| GGAGGAGATGTTGCTCCACT+CGG | - | chr6_1:2957068-2957087 | Msa0869130:intron | 55.0% | |
| TGTTGCTCCACTCGGATCAC+AGG | - | chr6_1:2957076-2957095 | Msa0869130:intron | 55.0% | |
| GTTACAGCCTGTGATCCGAG+TGG | + | chr6_1:2957086-2957105 | None:intergenic | 55.0% | |
| GGTCACCGGTACGAAAGAGA+AGG | + | chr6_1:2957450-2957469 | None:intergenic | 55.0% | |
| CCCCAGGCAAGGGAAATTCT+AGG | + | chr6_1:2957555-2957574 | None:intergenic | 55.0% | |
| ATTTCCCTTGCCTGGGGAAG+AGG | - | chr6_1:2957558-2957577 | Msa0869130:intron | 55.0% | |
| GAAGCCGCAGCTAAAACCGA+TGG | - | chr6_1:2957718-2957737 | Msa0869130:CDS | 55.0% | |
| AGTGTCCAAGCTGCCGTGTA+TGG | - | chr6_1:2957775-2957794 | Msa0869130:intron | 55.0% | |
| CACGGAACAAGCTTGCGTCA+AGG | + | chr6_1:2957816-2957835 | None:intergenic | 55.0% | |
| ATCGGAGAAAGCGACGGTGG+CGG | + | chr6_1:2952714-2952733 | None:intergenic | 60.0% | |
| GTGCGTGAGTTTCGGCCTTC+GGG | - | chr6_1:2953653-2953672 | Msa0869130:CDS | 60.0% | |
| TGCGTGAGTTTCGGCCTTCG+GGG | - | chr6_1:2953654-2953673 | Msa0869130:CDS | 60.0% | |
| CAGCCGGGGTCTACACAACA+AGG | - | chr6_1:2955844-2955863 | Msa0869130:CDS | 60.0% | |
| !! | CCAGGGGTATTTCCCTCTGG+AGG | + | chr6_1:2956162-2956181 | None:intergenic | 60.0% |
| CCTCCAGAGGGAAATACCCC+TGG | - | chr6_1:2956159-2956178 | Msa0869130:intron | 60.0% | |
| ACCAGGACGGTTCGTCGCAA+GGG | + | chr6_1:2957494-2957513 | None:intergenic | 60.0% | |
| CGCTTCCATACACGGCAGCT+TGG | + | chr6_1:2957783-2957802 | None:intergenic | 60.0% | |
| ! | GCCACCGTCGCTTTCTCCGA+TGG | - | chr6_1:2952713-2952732 | Msa0869130:three_prime_UTR | 65.0% |
| GCCATCGGAGAAAGCGACGG+TGG | + | chr6_1:2952717-2952736 | None:intergenic | 65.0% | |
| GGCGCCATCGGAGAAAGCGA+CGG | + | chr6_1:2952720-2952739 | None:intergenic | 65.0% | |
| GAGTTTCGGCCTTCGGGGCT+AGG | - | chr6_1:2953659-2953678 | Msa0869130:CDS | 65.0% | |
| GCCCCGTCTTCAACACGCTG+AGG | + | chr6_1:2954126-2954145 | None:intergenic | 65.0% | |
| GGAGTGACTGCTCTGGCAGC+CGG | - | chr6_1:2955828-2955847 | Msa0869130:CDS | 65.0% | |
| GAGTGACTGCTCTGGCAGCC+GGG | - | chr6_1:2955829-2955848 | Msa0869130:CDS | 65.0% | |
| AGTGACTGCTCTGGCAGCCG+GGG | - | chr6_1:2955830-2955849 | Msa0869130:CDS | 65.0% | |
| GACGGTTCGTCGCAAGGGCA+AGG | + | chr6_1:2957489-2957508 | None:intergenic | 65.0% | |
| CACCAGGACGGTTCGTCGCA+AGG | + | chr6_1:2957495-2957514 | None:intergenic | 65.0% | |
| CGCTCCTCTTCCCCAGGCAA+GGG | + | chr6_1:2957565-2957584 | None:intergenic | 65.0% | |
| ACGCTCCTCTTCCCCAGGCA+AGG | + | chr6_1:2957566-2957585 | None:intergenic | 65.0% | |
| ! | AGCGACGGTGGCGGCGGTTA+AGG | + | chr6_1:2952705-2952724 | None:intergenic | 70.0% |
| ! | GGAGAAAGCGACGGTGGCGG+CGG | + | chr6_1:2952711-2952730 | None:intergenic | 70.0% |
| GCCCTTGCGACGAACCGTCC+TGG | - | chr6_1:2957490-2957509 | Msa0869130:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 2952617 | 2958193 | 2952617 | ID=Msa0869130;Name=Msa0869130 |
| chr6_1 | mRNA | 2952617 | 2958193 | 2952617 | ID=Msa0869130-mRNA-1;Parent=Msa0869130;Name=Msa0869130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=51|1|1|1|0.87|0.77|9|203|604 |
| chr6_1 | exon | 2952617 | 2952804 | 2952617 | ID=Msa0869130-mRNA-1:exon:933;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2952892 | 2953411 | 2952892 | ID=Msa0869130-mRNA-1:exon:932;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2953618 | 2953766 | 2953618 | ID=Msa0869130-mRNA-1:exon:931;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2954386 | 2954719 | 2954386 | ID=Msa0869130-mRNA-1:exon:930;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2954945 | 2955035 | 2954945 | ID=Msa0869130-mRNA-1:exon:929;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2955394 | 2955703 | 2955394 | ID=Msa0869130-mRNA-1:exon:928;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2955789 | 2955899 | 2955789 | ID=Msa0869130-mRNA-1:exon:927;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2957682 | 2957777 | 2957682 | ID=Msa0869130-mRNA-1:exon:926;Parent=Msa0869130-mRNA-1 |
| chr6_1 | exon | 2957924 | 2958193 | 2957924 | ID=Msa0869130-mRNA-1:exon:925;Parent=Msa0869130-mRNA-1 |
| chr6_1 | five_prime_UTR | 2958143 | 2958193 | 2958143 | ID=Msa0869130-mRNA-1:five_prime_utr;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2957924 | 2958142 | 2957924 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2957682 | 2957777 | 2957682 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2955789 | 2955899 | 2955789 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2955394 | 2955703 | 2955394 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2954945 | 2955035 | 2954945 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2954386 | 2954719 | 2954386 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2953618 | 2953766 | 2953618 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | CDS | 2952907 | 2953411 | 2952907 | ID=Msa0869130-mRNA-1:cds;Parent=Msa0869130-mRNA-1 |
| chr6_1 | three_prime_UTR | 2952892 | 2952906 | 2952892 | ID=Msa0869130-mRNA-1:three_prime_utr;Parent=Msa0869130-mRNA-1 |
| chr6_1 | three_prime_UTR | 2952617 | 2952804 | 2952617 | ID=Msa0869130-mRNA-1:three_prime_utr;Parent=Msa0869130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
