AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806000 MtrunA17_Chr5g0414321 93.750 464 22 1 1 457 1 464 0.0 899
Msa0806000 MtrunA17_Chr5g0414331 93.450 458 23 1 7 457 9 466 0.0 887
Msa0806000 MtrunA17_Chr6g0464871 48.578 457 223 3 1 446 13 468 2.42e-160 461
Msa0806000 MtrunA17_Chr6g0464841 48.359 457 224 3 1 446 1 456 4.69e-160 460
Msa0806000 MtrunA17_Chr6g0464861 48.026 456 226 3 1 446 1 455 4.78e-154 445
Msa0806000 MtrunA17_Chr6g0464881 46.593 455 231 3 1 444 1 454 8.65e-154 444
Msa0806000 MtrunA17_Chr8g0380531 46.552 464 226 5 2 447 1 460 5.18e-148 429
Msa0806000 MtrunA17_Chr6g0464921 45.614 456 237 2 1 445 1 456 4.48e-146 424
Msa0806000 MtrunA17_Chr7g0249981 46.222 450 228 6 8 446 22 468 1.99e-145 424
Msa0806000 MtrunA17_Chr7g0250001 45.190 447 233 5 8 444 3 447 1.77e-142 416
Msa0806000 MtrunA17_Chr7g0249931 43.653 449 237 7 9 444 38 483 1.06e-129 384
Msa0806000 MtrunA17_Chr8g0377921 40.998 461 238 15 12 442 5 461 5.65e-108 327
Msa0806000 MtrunA17_Chr3g0121991 38.936 470 254 12 8 444 76 545 3.60e-103 318
Msa0806000 MtrunA17_Chr8g0377941 38.298 470 237 15 12 444 8 461 4.70e-98 302
Msa0806000 MtrunA17_Chr3g0098111 37.131 474 251 12 10 446 8 471 3.01e-96 298
Msa0806000 MtrunA17_Chr1g0207981 35.684 468 267 8 10 447 12 475 8.15e-96 296
Msa0806000 MtrunA17_Chr3g0122001 37.792 471 259 13 8 444 3 473 7.79e-92 298
Msa0806000 MtrunA17_Chr3g0122001 38.136 472 255 13 8 444 483 952 8.57e-89 290
Msa0806000 MtrunA17_Chr1g0207861 37.155 471 257 10 9 446 6 470 1.24e-91 286
Msa0806000 MtrunA17_Chr1g0207971 34.361 454 268 7 9 441 6 450 2.50e-89 279
Msa0806000 MtrunA17_Chr1g0161351 35.957 470 260 9 9 444 35 497 9.04e-88 276
Msa0806000 MtrunA17_Chr4g0053501 35.158 475 264 13 6 448 6 468 2.47e-86 273
Msa0806000 MtrunA17_Chr1g0207831 33.544 474 281 9 10 455 7 474 2.18e-85 270
Msa0806000 MtrunA17_Chr7g0250021 41.270 315 171 5 9 311 10 322 6.45e-82 256
Msa0806000 MtrunA17_Chr7g0249961 51.489 235 112 2 221 455 38 270 9.57e-82 253
Msa0806000 MtrunA17_Chr1g0207951 33.913 460 267 9 10 444 123 570 2.17e-81 272
Msa0806000 MtrunA17_Chr1g0207951 34.573 457 274 9 10 444 655 1108 3.22e-80 269
Msa0806000 MtrunA17_Chr8g0365811 33.888 481 277 10 10 455 494 968 1.45e-80 268
Msa0806000 MtrunA17_Chr8g0365811 35.232 474 272 10 10 449 8 480 1.17e-78 263
Msa0806000 MtrunA17_Chr4g0053321 34.855 482 266 13 1 448 16 483 1.95e-80 258
Msa0806000 MtrunA17_Chr1g0207931 34.498 458 226 10 10 444 91 497 2.02e-80 258
Msa0806000 MtrunA17_Chr3g0118691 32.211 475 274 11 11 444 15 482 1.99e-75 244
Msa0806000 MtrunA17_Chr5g0393591 31.957 460 246 9 11 444 17 435 8.43e-75 241
Msa0806000 MtrunA17_Chr5g0401721 33.054 478 277 14 10 451 7 477 4.01e-74 240
Msa0806000 MtrunA17_Chr3g0118711 31.429 490 280 11 4 448 6 484 4.21e-74 241
Msa0806000 MtrunA17_Chr3g0118671 30.595 487 282 10 7 448 2 477 4.50e-74 240
Msa0806000 MtrunA17_Chr3g0118701 32.083 480 280 12 11 450 15 488 6.78e-73 238
Msa0806000 MtrunA17_Chr3g0118771 30.894 492 284 11 4 450 14 494 1.20e-71 234
Msa0806000 MtrunA17_Chr5g0426431 31.809 481 268 12 8 442 9 475 3.32e-71 233
Msa0806000 MtrunA17_Chr3g0092641 32.495 477 266 13 5 437 6 470 4.90e-71 232
Msa0806000 MtrunA17_Chr3g0078841 30.722 485 276 13 7 444 6 477 1.21e-66 221
Msa0806000 MtrunA17_Chr7g0218791 32.321 461 264 14 9 442 3 442 2.34e-66 219
Msa0806000 MtrunA17_Chr2g0278711 30.672 476 278 13 11 444 11 476 8.11e-66 219
Msa0806000 MtrunA17_Chr6g0454341 29.668 482 279 12 7 441 6 474 9.81e-64 213
Msa0806000 MtrunA17_Chr6g0453951 28.947 494 287 12 1 444 47 526 3.46e-63 213
Msa0806000 MtrunA17_Chr7g0217881 30.886 463 280 12 11 444 10 461 5.89e-63 211
Msa0806000 MtrunA17_Chr4g0050341 31.250 480 270 12 11 441 19 487 6.72e-63 211
Msa0806000 MtrunA17_Chr7g0218811 31.373 459 262 14 11 442 15 447 7.89e-63 210
Msa0806000 MtrunA17_Chr7g0218831 31.236 461 259 15 11 442 6 437 3.43e-62 208
Msa0806000 MtrunA17_Chr6g0454191 29.412 493 285 13 2 444 1 480 4.62e-62 209
Msa0806000 MtrunA17_Chr7g0218841 31.042 451 272 15 11 441 6 437 4.77e-62 207
Msa0806000 MtrunA17_Chr6g0454361 29.545 484 273 14 11 442 11 478 3.81e-61 206
Msa0806000 MtrunA17_Chr5g0431401 30.515 485 256 16 5 446 4 450 1.52e-60 204
Msa0806000 MtrunA17_Chr5g0431361 29.314 481 276 14 2 446 3 455 3.65e-60 203
Msa0806000 MtrunA17_Chr6g0454331 29.835 486 275 16 11 444 7 478 5.39e-60 203
Msa0806000 MtrunA17_Chr6g0454321 29.512 471 272 13 7 430 6 463 2.31e-59 205
Msa0806000 MtrunA17_Chr6g0454301 29.012 486 283 12 7 444 259 730 5.35e-59 206
Msa0806000 MtrunA17_Chr6g0454301 33.906 233 141 6 215 441 1 226 3.17e-37 144
Msa0806000 MtrunA17_Chr3g0118751 28.958 480 266 11 11 450 6 450 6.02e-59 200
Msa0806000 MtrunA17_Chr5g0431421 29.237 472 275 12 5 444 4 448 6.35e-59 200
Msa0806000 MtrunA17_Chr7g0218821 30.454 463 272 13 11 442 5 448 1.26e-58 199
Msa0806000 MtrunA17_Chr3g0118661 31.034 464 271 14 11 433 13 468 2.75e-58 199
Msa0806000 MtrunA17_Chr6g0454401 28.157 483 294 12 7 444 6 480 3.32e-58 199
Msa0806000 MtrunA17_Chr4g0032331 33.895 475 259 19 6 448 2 453 4.74e-58 197
Msa0806000 MtrunA17_Chr8g0359821 28.067 481 286 13 11 444 10 477 5.09e-58 198
Msa0806000 MtrunA17_Chr5g0431371 29.436 479 257 15 11 446 10 450 6.79e-58 197
Msa0806000 MtrunA17_Chr8g0336331 28.423 482 290 12 7 444 6 476 1.12e-57 197
Msa0806000 MtrunA17_Chr3g0112761 32.265 468 267 15 6 444 3 449 1.13e-57 197
Msa0806000 MtrunA17_Chr6g0454141 28.067 481 288 14 11 444 10 479 2.65e-57 196
Msa0806000 MtrunA17_Chr6g0454291 30.165 484 274 16 11 444 7 476 8.07e-57 195
Msa0806000 MtrunA17_Chr4g0044511 30.584 497 266 20 5 446 34 506 8.89e-57 196
Msa0806000 MtrunA17_Chr3g0118721 36.140 285 163 5 171 441 7 286 1.73e-56 189
Msa0806000 MtrunA17_Chr6g0454151 29.363 487 290 16 6 448 5 481 2.63e-56 194
Msa0806000 MtrunA17_Chr6g0454121 29.474 475 282 15 11 441 10 475 3.01e-56 193
Msa0806000 MtrunA17_Chr8g0336691 31.733 479 260 16 9 440 917 1375 4.46e-56 201
Msa0806000 MtrunA17_Chr8g0336691 30.947 475 273 12 7 440 9 469 2.21e-53 193
Msa0806000 MtrunA17_Chr8g0336691 32.120 467 246 16 9 440 478 908 2.46e-51 187
Msa0806000 MtrunA17_Chr8g0336651 31.733 479 262 13 9 440 779 1239 4.71e-56 201
Msa0806000 MtrunA17_Chr8g0336651 27.859 481 286 12 9 446 4 466 7.49e-47 174
Msa0806000 MtrunA17_Chr8g0336651 38.583 254 133 5 191 440 536 770 1.86e-41 158
Msa0806000 MtrunA17_Chr5g0412131 31.513 476 274 17 11 448 12 473 1.52e-55 191
Msa0806000 MtrunA17_Chr7g0243631 28.717 491 294 12 7 449 9 491 3.92e-55 191
Msa0806000 MtrunA17_Chr6g0454261 28.926 484 290 17 6 444 5 479 5.38e-55 190
Msa0806000 MtrunA17_Chr6g0454201 28.803 493 289 12 1 444 1 480 7.82e-55 190
Msa0806000 MtrunA17_Chr6g0452771 28.898 481 284 15 11 444 10 479 1.44e-54 189
Msa0806000 MtrunA17_Chr5g0431441 30.705 482 262 17 11 449 18 470 1.79e-54 188
Msa0806000 MtrunA17_Chr5g0412101 30.453 486 277 16 6 448 7 474 2.48e-54 188
Msa0806000 MtrunA17_Chr6g0454211 30.165 484 274 17 11 444 297 766 5.09e-54 192
Msa0806000 MtrunA17_Chr6g0454211 30.303 231 113 6 162 383 61 252 1.16e-18 89.0
Msa0806000 MtrunA17_Chr3g0112771 30.201 447 290 9 12 444 13 451 5.21e-54 187
Msa0806000 MtrunA17_Chr7g0232391 29.243 489 268 12 10 446 5 467 7.85e-54 187
Msa0806000 MtrunA17_Chr3g0106231 30.000 460 276 14 11 447 18 454 8.27e-54 187
Msa0806000 MtrunA17_Chr6g0453961 28.243 478 286 14 11 441 19 486 1.98e-53 186
Msa0806000 MtrunA17_Chr5g0412111 30.625 480 272 21 11 448 5 465 2.56e-53 185
Msa0806000 MtrunA17_Chr1g0153451 30.638 470 276 14 9 441 4 460 2.57e-53 185
Msa0806000 MtrunA17_Chr6g0454131 28.632 475 286 14 11 441 10 475 5.12e-53 185
Msa0806000 MtrunA17_Chr7g0232411 28.807 486 268 12 10 443 5 464 2.36e-52 183
Msa0806000 MtrunA17_Chr7g0243681 30.101 495 289 17 1 449 1 484 2.43e-52 183
Msa0806000 MtrunA17_Chr8g0361371 29.532 491 266 17 6 441 2 467 3.92e-52 182
Msa0806000 MtrunA17_Chr6g0454351 28.008 482 272 11 7 441 8 461 6.40e-52 182
Msa0806000 MtrunA17_Chr5g0440421 30.339 501 280 19 1 442 1 491 1.07e-51 182
Msa0806000 MtrunA17_Chr5g0423981 27.837 467 272 13 11 444 10 444 3.54e-51 179
Msa0806000 MtrunA17_Chr6g0454181 27.835 485 284 13 11 444 10 479 4.21e-51 180
Msa0806000 MtrunA17_Chr8g0336741 29.918 488 269 13 2 440 4 467 4.90e-51 179
Msa0806000 MtrunA17_Chr8g0339631 28.810 479 284 11 11 446 6 470 1.17e-50 178
Msa0806000 MtrunA17_Chr7g0232401 28.721 477 284 13 10 444 5 467 2.24e-50 177
Msa0806000 MtrunA17_Chr7g0243931 28.514 498 298 16 1 449 7 495 2.53e-50 178
Msa0806000 MtrunA17_Chr8g0373301 29.485 485 274 14 11 449 9 471 3.73e-50 177
Msa0806000 MtrunA17_Chr5g0426401 32.907 313 186 6 146 444 8 310 4.48e-50 172
Msa0806000 MtrunA17_Chr7g0232331 29.012 486 268 15 11 444 6 466 5.24e-50 176
Msa0806000 MtrunA17_Chr8g0347281 29.598 473 266 12 12 440 19 468 8.27e-50 176
Msa0806000 MtrunA17_Chr8g0334831 29.713 488 266 16 12 441 7 475 1.04e-49 176
Msa0806000 MtrunA17_Chr8g0366391 29.339 484 289 18 5 444 3 477 1.09e-49 176
Msa0806000 MtrunA17_Chr6g0459311 29.025 472 274 13 12 440 14 467 1.23e-49 176
Msa0806000 MtrunA17_Chr6g0486251 29.668 482 262 15 8 438 3 458 1.31e-49 175
Msa0806000 MtrunA17_Chr6g0486201 29.668 482 262 15 8 438 3 458 1.31e-49 175
Msa0806000 MtrunA17_Chr8g0339451 31.496 381 212 9 102 446 98 465 3.01e-49 174
Msa0806000 MtrunA17_Chr7g0275511 29.839 496 265 17 12 452 16 483 1.03e-48 173
Msa0806000 MtrunA17_Chr8g0339461 28.631 482 286 10 10 446 5 473 1.18e-48 173
Msa0806000 MtrunA17_Chr7g0243771 28.370 497 272 18 8 444 3 475 2.13e-48 172
Msa0806000 MtrunA17_Chr8g0336731 30.488 492 268 17 1 441 19 487 2.30e-48 173
Msa0806000 MtrunA17_Chr7g0243801 29.032 496 274 21 6 444 2 476 3.74e-48 172
Msa0806000 MtrunA17_Chr7g0232341 28.163 490 279 13 11 450 6 472 4.05e-48 171
Msa0806000 MtrunA17_Chr7g0243871 27.273 484 294 14 5 444 3 472 6.07e-48 171
Msa0806000 MtrunA17_Chr6g0462571 29.670 455 276 15 14 433 5 450 6.29e-48 171
Msa0806000 MtrunA17_Chr5g0419771 29.495 495 282 21 8 447 33 515 1.05e-47 171
Msa0806000 MtrunA17_Chr5g0401851 28.750 480 286 13 13 444 12 483 1.11e-47 171
Msa0806000 MtrunA17_Chr6g0454251 29.073 399 223 11 11 359 7 395 1.38e-47 168
Msa0806000 MtrunA17_Chr8g0347271 29.792 480 256 13 12 440 20 469 1.70e-47 170
Msa0806000 MtrunA17_Chr4g0060511 28.175 504 295 18 1 449 1 492 2.09e-47 170
Msa0806000 MtrunA17_Chr2g0329111 29.719 498 270 18 12 449 7 484 2.66e-47 170
Msa0806000 MtrunA17_Chr6g0449931 28.274 481 257 15 11 433 6 456 2.75e-47 169
Msa0806000 MtrunA17_Chr8g0335161 28.008 482 290 13 7 446 2 468 3.42e-47 169
Msa0806000 MtrunA17_Chr5g0448551 28.132 455 297 12 12 448 8 450 1.09e-46 167
Msa0806000 MtrunA17_Chr6g0462531 31.793 368 223 10 92 440 102 460 1.38e-46 167
Msa0806000 MtrunA17_Chr8g0335141 28.306 484 291 14 4 446 2 470 1.64e-46 167
Msa0806000 MtrunA17_Chr4g0072761 27.932 469 292 12 3 446 7 454 3.59e-46 166
Msa0806000 MtrunA17_Chr7g0243951 26.800 500 303 19 1 449 1 488 4.04e-46 167
Msa0806000 MtrunA17_Chr6g0462521 33.427 356 206 9 94 433 99 439 4.11e-46 166
Msa0806000 MtrunA17_Chr7g0275681 28.803 493 276 18 7 444 8 480 4.30e-46 166
Msa0806000 MtrunA17_Chr4g0072771 28.200 461 290 12 10 446 24 467 5.64e-46 166
Msa0806000 MtrunA17_Chr5g0429711 29.854 479 279 17 7 448 7 465 8.35e-46 165
Msa0806000 MtrunA17_Chr8g0334851 30.042 476 267 15 11 438 6 463 1.02e-45 165
Msa0806000 MtrunA17_Chr4g0066131 27.711 498 276 16 3 444 5 474 1.02e-45 165
Msa0806000 MtrunA17_Chr4g0066151 27.992 493 283 16 2 444 9 479 1.75e-45 165
Msa0806000 MtrunA17_Chr4g0066261 28.367 490 268 15 15 444 15 481 3.23e-45 164
Msa0806000 MtrunA17_Chr5g0420801 29.810 473 280 15 7 444 3 458 4.41e-45 163
Msa0806000 MtrunA17_Chr7g0243861 28.081 495 292 17 7 449 10 492 8.81e-45 163
Msa0806000 MtrunA17_Chr1g0153461 38.967 213 113 2 251 446 2 214 9.14e-45 155
Msa0806000 MtrunA17_Chr7g0265141 29.435 496 279 19 5 443 3 484 1.01e-44 162
Msa0806000 MtrunA17_Chr7g0265041 28.056 499 293 15 1 444 1 488 1.10e-44 163
Msa0806000 MtrunA17_Chr7g0232311 27.615 478 276 11 11 441 6 460 1.18e-44 162
Msa0806000 MtrunA17_Chr6g0462551 27.813 471 261 18 17 433 8 453 1.26e-44 162
Msa0806000 MtrunA17_Chr5g0442561 26.899 487 288 13 11 446 5 474 1.76e-44 162
Msa0806000 MtrunA17_Chr7g0235051 27.066 484 268 15 1 437 1 446 3.30e-44 161
Msa0806000 MtrunA17_Chr4g0066221 28.690 481 277 18 15 444 15 480 9.02e-44 160
Msa0806000 MtrunA17_Chr7g0243781 27.054 499 279 20 5 444 3 475 1.25e-43 160
Msa0806000 MtrunA17_Chr1g0159551 26.216 473 275 15 16 445 19 460 1.27e-43 159
Msa0806000 MtrunA17_Chr7g0265101 28.627 510 278 21 5 449 3 491 2.05e-43 159
Msa0806000 MtrunA17_Chr4g0066201 28.631 482 267 17 15 446 22 476 2.19e-43 159
Msa0806000 MtrunA17_Chr8g0369341 29.448 489 271 19 7 444 3 468 3.10e-43 158
Msa0806000 MtrunA17_Chr4g0044501 27.975 479 293 18 8 444 7 475 5.61e-43 158
Msa0806000 MtrunA17_Chr3g0079731 27.198 489 281 13 12 442 7 478 5.77e-43 158
Msa0806000 MtrunA17_Chr5g0448521 26.494 502 268 15 10 446 4 469 6.63e-43 157
Msa0806000 MtrunA17_Chr8g0334861 32.124 386 223 11 89 445 89 464 1.24e-42 157
Msa0806000 MtrunA17_Chr5g0442521 26.775 493 282 14 12 446 6 477 1.76e-42 156
Msa0806000 MtrunA17_Chr7g0265051 28.974 497 291 21 5 449 3 489 4.07e-42 156
Msa0806000 MtrunA17_Chr6g0462541 30.707 368 208 11 94 433 104 452 4.86e-42 155
Msa0806000 MtrunA17_Chr8g0339601 32.812 320 162 7 163 446 30 332 1.73e-41 150
Msa0806000 MtrunA17_Chr6g0454271 32.404 287 174 8 171 444 7 286 2.20e-41 149
Msa0806000 MtrunA17_Chr4g0044521 28.690 481 291 15 6 448 4 470 5.96e-41 152
Msa0806000 MtrunA17_Chr4g0014061 28.333 480 294 18 5 444 3 472 8.20e-41 152
Msa0806000 MtrunA17_Chr4g0011051 28.486 502 270 21 10 444 8 487 8.23e-41 152
Msa0806000 MtrunA17_Chr6g0463861 26.598 485 279 15 15 446 15 475 9.93e-41 152
Msa0806000 MtrunA17_Chr5g0442601 25.301 498 298 13 5 446 398 877 1.22e-40 155
Msa0806000 MtrunA17_Chr5g0442601 27.660 329 185 10 77 381 34 333 2.74e-28 118
Msa0806000 MtrunA17_Chr5g0432731 32.680 306 163 10 165 446 12 298 1.47e-40 147
Msa0806000 MtrunA17_Chr8g0339441 39.070 215 111 2 252 446 217 431 1.68e-40 150
Msa0806000 MtrunA17_Chr5g0442541 26.844 488 280 13 11 446 5 467 1.83e-40 150
Msa0806000 MtrunA17_Chr5g0442491 26.680 491 284 14 12 446 6 476 2.38e-40 150
Msa0806000 MtrunA17_Chr1g0179901 26.939 490 302 17 8 447 13 496 5.88e-40 150
Msa0806000 MtrunA17_Chr3g0106251 34.818 247 143 7 206 447 63 296 6.89e-40 145
Msa0806000 MtrunA17_Chr5g0419761 25.662 491 304 17 6 444 4 485 8.46e-40 149
Msa0806000 MtrunA17_Chr8g0374971 25.625 480 298 14 12 444 13 480 1.21e-39 149
Msa0806000 MtrunA17_Chr8g0370941 28.358 536 256 24 11 454 8 507 4.62e-39 147
Msa0806000 MtrunA17_Chr7g0243711 33.466 251 148 6 216 449 73 321 5.68e-39 143
Msa0806000 MtrunA17_Chr5g0442581 25.720 486 293 13 12 444 6 476 5.69e-39 147
Msa0806000 MtrunA17_Chr5g0429681 27.755 490 292 16 1 448 34 503 5.77e-39 147
Msa0806000 MtrunA17_Chr6g0463851 26.569 478 293 17 15 444 15 482 8.26e-39 146
Msa0806000 MtrunA17_Chr6g0454221 35.345 232 140 5 215 441 1 227 1.15e-38 142
Msa0806000 MtrunA17_Chr8g0374901 24.895 478 298 13 14 444 15 478 1.19e-38 146
Msa0806000 MtrunA17_Chr2g0307961 26.749 486 284 13 7 445 9 469 1.20e-38 145
Msa0806000 MtrunA17_Chr4g0066281 27.883 477 271 18 15 444 16 466 2.40e-38 145
Msa0806000 MtrunA17_Chr6g0463891 27.126 494 300 17 1 444 1 484 2.90e-38 145
Msa0806000 MtrunA17_Chr2g0302961 27.439 492 270 19 11 445 5 466 4.70e-38 144
Msa0806000 MtrunA17_Chr2g0294921 27.778 486 276 17 15 444 164 630 4.86e-38 146
Msa0806000 MtrunA17_Chr4g0044481 28.676 408 229 15 5 381 21 397 5.28e-38 143
Msa0806000 MtrunA17_Chr7g0243761 27.510 498 273 17 1 449 1 459 5.83e-38 144
Msa0806000 MtrunA17_Chr5g0416741 25.000 496 307 14 1 444 1 483 6.98e-38 144
Msa0806000 MtrunA17_Chr7g0265111 26.230 488 311 13 8 449 36 520 7.47e-38 144
Msa0806000 MtrunA17_Chr8g0382021 25.417 480 279 16 16 445 39 489 7.56e-38 144
Msa0806000 MtrunA17_Chr4g0066171 28.067 481 266 20 15 444 25 476 9.83e-38 143
Msa0806000 MtrunA17_Chr8g0374941 25.205 488 294 16 14 448 952 1421 1.95e-37 146
Msa0806000 MtrunA17_Chr8g0374941 24.947 469 283 15 14 430 14 465 1.71e-34 137
Msa0806000 MtrunA17_Chr8g0374941 24.516 465 282 14 14 426 479 926 7.43e-33 132
Msa0806000 MtrunA17_Chr7g0265151 25.697 502 292 18 4 444 2 483 2.06e-37 142
Msa0806000 MtrunA17_Chr5g0416821 27.254 488 285 18 5 444 8 473 3.55e-37 142
Msa0806000 MtrunA17_Chr5g0428081 27.215 474 292 14 15 444 15 479 3.85e-37 142
Msa0806000 MtrunA17_Chr8g0374931 27.883 477 287 15 15 444 15 481 4.24e-37 142
Msa0806000 MtrunA17_Chr1g0173121 32.692 208 126 3 252 445 256 463 1.34e-36 140
Msa0806000 MtrunA17_Chr8g0355011 27.500 360 192 9 105 441 45 358 2.67e-36 137
Msa0806000 MtrunA17_Chr8g0355221 28.455 369 228 11 109 446 125 488 3.19e-36 139
Msa0806000 MtrunA17_Chr8g0361411 29.461 482 271 19 11 453 8 459 3.67e-36 139
Msa0806000 MtrunA17_Chr6g0466831 27.696 473 299 15 1 447 4 459 7.04e-36 138
Msa0806000 MtrunA17_Chr1g0165701 26.132 486 312 16 2 446 6 485 3.96e-35 136
Msa0806000 MtrunA17_Chr8g0350881 25.410 488 297 15 12 448 13 484 6.22e-35 135
Msa0806000 MtrunA17_Chr7g0232351 27.970 404 208 12 9 358 4 378 1.10e-34 133
Msa0806000 MtrunA17_Chr6g0466841 27.273 473 301 15 1 447 4 459 2.52e-34 134
Msa0806000 MtrunA17_Chr4g0042891 29.012 486 272 16 10 446 6 467 2.72e-34 134
Msa0806000 MtrunA17_Chr7g0218311 27.044 477 288 19 15 444 20 483 2.99e-34 134
Msa0806000 MtrunA17_Chr2g0278721 27.426 474 294 15 3 444 7 462 4.79e-34 135
Msa0806000 MtrunA17_Chr2g0278721 27.495 491 293 20 1 448 507 977 9.86e-31 125
Msa0806000 MtrunA17_Chr4g0029131 25.597 461 273 14 7 425 8 440 5.95e-34 135
Msa0806000 MtrunA17_Chr4g0069611 26.364 440 296 11 5 422 6 439 6.49e-34 132
Msa0806000 MtrunA17_Chr2g0294931 26.263 495 294 16 10 450 10 487 1.39e-33 132
Msa0806000 MtrunA17_Chr6g0464091 26.362 459 274 15 6 422 13 449 2.47e-33 131
Msa0806000 MtrunA17_Chr5g0410941 26.850 473 293 18 15 444 27 489 3.64e-33 131
Msa0806000 MtrunA17_Chr7g0243611 31.944 288 156 10 115 381 3 271 4.07e-33 127
Msa0806000 MtrunA17_Chr2g0302851 27.571 457 276 18 1 422 4 440 4.11e-33 130
Msa0806000 MtrunA17_Chr2g0278741 27.111 450 278 13 7 422 93 526 4.87e-33 131
Msa0806000 MtrunA17_Chr7g0243851 26.392 485 283 18 1 449 1 447 5.38e-33 130
Msa0806000 MtrunA17_Chr7g0241781 26.049 453 280 14 11 444 9 425 1.51e-32 128
Msa0806000 MtrunA17_Chr5g0403641 26.166 493 250 15 7 437 55 495 3.45e-32 128
Msa0806000 MtrunA17_Chr5g0442511 25.105 478 293 14 5 444 43 493 3.70e-32 128
Msa0806000 MtrunA17_Chr4g0039881 27.126 435 264 14 21 422 2 416 4.62e-32 127
Msa0806000 MtrunA17_Chr4g0042931 28.008 482 280 15 10 446 6 465 5.08e-32 127
Msa0806000 MtrunA17_Chr5g0409591 24.508 457 272 14 12 407 5 449 5.18e-32 127
Msa0806000 MtrunA17_Chr7g0243911 32.877 219 124 5 228 429 3 215 5.27e-32 122
Msa0806000 MtrunA17_Chr6g0482061 25.971 489 283 15 1 432 1 467 8.03e-32 127
Msa0806000 MtrunA17_Chr8g0367221 24.684 474 313 13 4 446 5 465 1.46e-31 128
Msa0806000 MtrunA17_Chr8g0367221 25.499 451 295 11 4 422 791 1232 2.71e-30 125
Msa0806000 MtrunA17_Chr8g0367221 32.323 198 123 3 254 444 1547 1740 8.92e-29 120
Msa0806000 MtrunA17_Chr5g0431431 27.861 402 204 13 11 397 10 340 1.51e-31 124
Msa0806000 MtrunA17_Chr2g0283041 26.591 440 289 12 8 422 4 434 1.89e-31 125
Msa0806000 MtrunA17_Chr7g0241801 25.439 456 285 13 8 444 6 425 2.40e-31 125
Msa0806000 MtrunA17_Chr1g0196851 24.843 479 260 17 7 425 42 480 3.91e-31 125
Msa0806000 MtrunA17_Chr6g0454371 35.632 174 104 3 275 444 1 170 4.92e-31 117
Msa0806000 MtrunA17_Chr6g0454171 31.496 254 145 8 194 441 76 306 2.66e-30 119
Msa0806000 MtrunA17_Chr7g0243811 30.877 285 162 10 108 373 99 367 2.98e-30 121
Msa0806000 MtrunA17_Chr4g0029151 25.983 458 275 15 7 425 16 448 6.76e-30 121
Msa0806000 MtrunA17_Chr2g0302991 26.626 492 269 16 12 445 6 463 7.07e-30 121
Msa0806000 MtrunA17_Chr1g0207881 44.961 129 69 1 315 441 253 381 1.09e-29 119
Msa0806000 MtrunA17_Chr1g0207881 29.520 271 158 7 10 265 7 259 3.12e-27 112
Msa0806000 MtrunA17_Chr3g0092031 33.168 202 128 3 255 453 6 203 2.60e-28 111
Msa0806000 MtrunA17_Chr2g0294941 26.722 363 206 12 108 427 17 362 4.39e-28 114
Msa0806000 MtrunA17_Chr8g0336251 25.826 484 291 18 8 446 4 464 1.52e-27 114
Msa0806000 MtrunA17_Chr8g0336321 25.826 484 291 18 8 446 4 464 2.34e-27 114
Msa0806000 MtrunA17_Chr4g0040691 26.444 450 274 14 10 422 7 436 1.09e-26 112
Msa0806000 MtrunA17_Chr8g0337381 42.623 122 68 1 319 440 2 121 7.09e-26 102
Msa0806000 MtrunA17_Chr3g0079711 35.326 184 99 4 279 442 3 186 1.65e-25 103
Msa0806000 MtrunA17_Chr4g0040711 25.503 447 282 14 10 422 7 436 3.22e-24 104
Msa0806000 MtrunA17_Chr8g0357361 38.060 134 78 3 252 381 117 249 1.81e-23 99.4
Msa0806000 MtrunA17_Chr4g0029161 23.913 460 254 16 7 425 8 412 1.42e-22 99.8
Msa0806000 MtrunA17_Chr5g0427571 29.730 222 144 5 204 418 57 273 1.46e-22 97.8
Msa0806000 MtrunA17_Chr6g0454231 30.980 255 125 9 197 441 2 215 2.37e-22 99.4
Msa0806000 MtrunA17_Chr7g0231631 32.367 207 115 6 251 444 65 259 4.42e-22 95.5
Msa0806000 MtrunA17_Chr2g0319761 26.608 451 272 18 10 422 7 436 2.79e-21 95.9
Msa0806000 MtrunA17_Chr1g0207911 28.829 222 142 4 10 215 7 228 2.90e-21 93.2
Msa0806000 MtrunA17_Chr2g0319731 25.482 467 281 16 1 422 9 453 4.74e-21 95.5
Msa0806000 MtrunA17_Chr8g0336261 36.496 137 79 3 275 407 1 133 5.21e-21 89.0
Msa0806000 MtrunA17_Chr4g0066141 34.375 160 90 5 299 444 193 351 6.54e-21 94.0
Msa0806000 MtrunA17_Chr2g0319801 25.055 455 278 14 8 422 5 436 1.50e-20 94.0
Msa0806000 MtrunA17_Chr2g0319751 24.783 460 265 16 10 420 484 911 2.27e-20 94.4
Msa0806000 MtrunA17_Chr2g0319751 23.991 446 262 20 10 420 7 410 4.09e-17 84.3
Msa0806000 MtrunA17_Chr2g0319791 25.771 454 268 14 10 420 7 434 2.62e-20 93.2
Msa0806000 MtrunA17_Chr8g0377911 36.567 134 78 3 12 139 8 140 1.72e-18 82.4
Msa0806000 MtrunA17_Chr7g0249971 50.649 77 34 2 8 81 8 83 8.27e-18 79.7
Msa0806000 MtrunA17_Chr2g0321331 34.091 176 90 5 256 422 87 245 3.16e-17 81.6
Msa0806000 MtrunA17_Chr5g0442501 25.705 319 205 9 12 311 6 311 4.21e-16 79.0
Msa0806000 MtrunA17_Chr6g0453941 27.358 212 118 6 116 299 54 257 8.51e-15 74.7
Msa0806000 MtrunA17_Chr3g0079721 33.186 226 120 10 66 271 72 286 2.37e-14 73.6
Msa0806000 MtrunA17_Chr6g0453981 30.612 147 90 3 162 299 61 204 7.16e-14 70.9
Msa0806000 MtrunA17_Chr8g0334841 33.333 162 96 5 162 319 1 154 1.12e-13 68.9
Msa0806000 MtrunA17_Chr5g0426411 27.742 155 97 4 6 147 7 159 1.06e-12 66.2
Msa0806000 MtrunA17_Chr7g0243721 41.176 85 48 1 221 305 60 142 2.19e-12 64.7
Msa0806000 MtrunA17_Chr6g0469961 31.847 157 93 4 146 295 15 164 2.94e-12 64.7
Msa0806000 MtrunA17_Chr3g0106241 34.328 134 75 4 11 138 18 144 2.32e-11 62.8
Msa0806000 MtrunA17_Chr8g0336271 22.672 247 153 6 7 221 6 246 2.89e-11 63.9
Msa0806000 MtrunA17_Chr5g0442551 24.127 315 164 10 48 328 21 294 4.06e-11 63.9
Msa0806000 MtrunA17_Chr7g0243731 40.541 74 44 0 315 388 5 78 6.53e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806000 AT1G24100.1 49.784 462 210 6 1 444 1 458 7.00e-163 468
Msa0806000 AT2G43820.1 48.018 454 212 9 6 444 2 446 3.16e-152 440
Msa0806000 AT2G43840.1 48.337 451 205 10 11 444 7 446 5.73e-147 427
Msa0806000 AT2G43840.2 48.115 451 206 10 11 444 7 446 7.77e-147 426
Msa0806000 AT1G05675.1 45.880 449 222 5 11 442 6 450 9.59e-136 398
Msa0806000 AT1G05680.1 45.111 450 224 5 11 442 6 450 1.08e-133 393
Msa0806000 AT2G31750.1 44.176 455 229 7 6 441 3 451 1.16e-126 375
Msa0806000 AT2G31750.2 43.601 461 235 7 6 447 3 457 6.34e-126 375
Msa0806000 AT2G31790.1 42.140 458 246 7 5 445 2 457 8.69e-122 363
Msa0806000 AT1G05530.1 37.768 466 242 11 11 444 5 454 1.36e-96 298
Msa0806000 AT1G05560.1 37.367 471 250 11 11 452 5 459 4.35e-95 295
Msa0806000 AT4G15480.1 35.745 470 262 10 8 444 16 478 6.07e-95 295
Msa0806000 AT1G05560.2 37.367 471 250 11 11 452 55 509 1.19e-94 295
Msa0806000 AT4G15490.1 34.490 490 260 12 7 453 4 475 1.48e-92 288
Msa0806000 AT3G21560.1 34.341 463 273 9 11 444 12 472 1.16e-91 287
Msa0806000 AT4G15500.1 34.322 472 280 10 6 452 4 470 3.71e-90 282
Msa0806000 AT4G14090.1 35.398 452 261 12 11 442 13 453 2.09e-83 264
Msa0806000 AT4G15550.1 33.333 477 255 14 11 442 13 471 5.67e-78 251
Msa0806000 AT2G23260.1 34.641 459 274 13 5 445 4 454 2.32e-77 248
Msa0806000 AT1G22380.1 33.753 477 264 14 11 444 13 480 9.24e-75 243
Msa0806000 AT2G23250.1 34.009 444 265 14 20 447 7 438 6.51e-74 239
Msa0806000 AT1G22400.1 31.992 472 276 10 11 442 13 479 6.20e-72 235
Msa0806000 AT1G22360.1 31.447 477 275 14 11 444 10 477 6.07e-71 233
Msa0806000 AT1G78270.1 31.677 483 278 14 5 444 7 480 1.17e-69 229
Msa0806000 AT2G36970.1 28.747 487 290 12 2 446 1 472 1.47e-68 226
Msa0806000 AT1G22340.1 29.498 478 284 11 11 444 13 481 1.47e-68 226
Msa0806000 AT1G22370.2 32.415 472 272 15 11 444 13 475 1.81e-67 223
Msa0806000 AT2G28080.1 28.814 472 288 10 15 452 22 479 3.45e-67 223
Msa0806000 AT1G22360.2 30.398 477 268 14 11 444 10 465 5.22e-66 219
Msa0806000 AT2G30140.1 33.820 479 256 16 3 448 5 455 7.28e-64 213
Msa0806000 AT2G30140.2 33.682 478 257 16 3 448 5 454 8.69e-64 213
Msa0806000 AT3G02100.1 32.174 460 269 14 11 442 13 457 6.49e-63 211
Msa0806000 AT3G46670.1 31.947 457 271 13 11 444 9 448 1.03e-60 205
Msa0806000 AT3G46660.1 31.360 456 275 11 12 444 15 455 2.40e-59 201
Msa0806000 AT5G17050.1 29.873 472 278 11 7 446 8 458 5.15e-58 198
Msa0806000 AT2G15490.3 29.752 484 281 14 9 444 5 477 1.04e-57 197
Msa0806000 AT2G30150.2 31.034 464 270 15 11 446 13 454 1.89e-57 196
Msa0806000 AT2G15480.1 30.247 486 280 17 7 444 6 480 5.97e-57 196
Msa0806000 AT5G59590.1 29.598 473 279 13 2 444 1 449 6.49e-57 195
Msa0806000 AT2G15490.1 29.158 487 283 13 9 444 5 480 1.45e-56 195
Msa0806000 AT2G30150.1 30.870 460 268 15 15 446 1 438 5.81e-56 192
Msa0806000 AT2G15480.2 30.120 498 275 18 7 444 6 490 8.71e-56 193
Msa0806000 AT3G46650.1 31.767 447 260 12 11 440 10 428 3.67e-55 190
Msa0806000 AT4G01070.1 30.608 477 269 12 6 438 3 461 4.06e-55 191
Msa0806000 AT1G01420.2 30.579 484 271 14 1 439 1 464 4.06e-55 191
Msa0806000 AT1G01420.1 30.625 480 268 14 5 439 2 461 1.22e-54 189
Msa0806000 AT5G05870.1 30.444 473 276 13 6 445 3 455 4.60e-54 187
Msa0806000 AT1G10400.1 28.512 477 291 16 6 446 2 464 5.01e-54 187
Msa0806000 AT5G59580.1 30.998 471 268 17 11 450 9 453 6.93e-54 187
Msa0806000 AT2G16890.2 29.661 472 289 13 11 448 9 471 2.88e-53 186
Msa0806000 AT5G38010.1 29.560 477 278 11 2 444 1 453 3.03e-52 182
Msa0806000 AT5G17040.1 29.167 456 284 11 9 444 3 439 3.37e-52 182
Msa0806000 AT5G38040.1 32.484 471 234 19 19 444 18 449 5.69e-52 182
Msa0806000 AT4G34131.1 29.448 489 283 20 7 446 6 481 7.52e-52 182
Msa0806000 AT1G30530.1 29.412 459 285 13 11 447 12 453 3.51e-51 179
Msa0806000 AT3G46700.1 29.412 459 276 15 11 444 9 444 8.81e-51 178
Msa0806000 AT5G14860.1 29.400 483 287 16 11 449 8 480 8.74e-50 177
Msa0806000 AT5G05880.1 28.785 469 285 13 6 446 3 450 9.76e-50 176
Msa0806000 AT3G46720.1 31.278 454 270 15 11 444 9 440 4.61e-49 174
Msa0806000 AT5G05860.1 28.817 465 284 12 6 444 4 447 5.32e-49 174
Msa0806000 AT3G46680.1 28.889 450 291 8 11 442 9 447 2.02e-48 172
Msa0806000 AT1G73880.1 30.247 486 274 19 3 446 6 468 3.41e-48 172
Msa0806000 AT3G46690.1 28.355 462 282 11 11 444 9 449 1.40e-47 170
Msa0806000 AT3G55710.1 30.323 465 275 15 11 444 8 454 3.49e-47 169
Msa0806000 AT5G17030.1 28.025 471 287 15 7 446 8 457 1.39e-46 167
Msa0806000 AT1G01390.1 28.810 479 283 10 5 441 2 464 2.26e-46 167
Msa0806000 AT2G36780.1 27.833 503 296 20 4 452 7 496 3.23e-46 167
Msa0806000 AT1G01390.2 28.810 479 283 10 5 441 19 481 3.71e-46 167
Msa0806000 AT5G05900.1 27.371 464 295 12 6 445 3 448 9.42e-46 165
Msa0806000 AT4G34138.1 27.968 497 278 19 6 445 6 479 9.85e-46 166
Msa0806000 AT1G22370.1 34.448 299 173 8 162 444 14 305 1.12e-45 161
Msa0806000 AT3G55700.1 28.942 463 290 15 6 444 3 450 2.61e-45 164
Msa0806000 AT2G36750.1 29.938 481 273 19 10 438 9 477 2.94e-45 164
Msa0806000 AT3G11340.1 26.096 456 293 13 12 444 10 444 3.59e-45 163
Msa0806000 AT2G36760.1 27.500 480 285 15 10 437 13 481 4.21e-45 164
Msa0806000 AT4G34135.1 26.962 497 298 15 1 446 1 483 4.52e-45 164
Msa0806000 AT5G03490.1 28.992 476 277 17 5 444 12 462 2.00e-44 162
Msa0806000 AT2G36800.1 27.846 492 285 19 3 438 4 481 2.56e-44 162
Msa0806000 AT2G29710.1 27.021 470 309 9 8 448 2 466 1.48e-43 159
Msa0806000 AT2G29740.1 27.733 494 282 12 5 444 2 474 1.99e-43 159
Msa0806000 AT5G12890.1 28.425 489 282 16 8 443 7 480 3.43e-43 159
Msa0806000 AT3G22250.1 28.289 456 252 14 12 416 9 440 8.52e-43 157
Msa0806000 AT2G36770.1 26.471 510 294 18 4 452 7 496 1.18e-42 157
Msa0806000 AT2G16890.3 29.117 419 255 12 11 396 9 418 1.45e-42 156
Msa0806000 AT2G29730.1 27.527 465 299 14 8 441 2 459 1.89e-41 154
Msa0806000 AT3G21800.1 26.253 499 285 13 8 446 2 477 6.10e-41 152
Msa0806000 AT3G53160.1 27.767 497 292 20 7 449 4 487 8.14e-41 152
Msa0806000 AT2G29750.1 26.749 486 298 14 6 446 3 475 1.26e-40 152
Msa0806000 AT5G17040.2 38.342 193 116 1 252 444 148 337 1.47e-40 148
Msa0806000 AT5G26310.1 28.785 469 277 18 11 437 7 460 2.10e-40 151
Msa0806000 AT3G50740.1 28.721 477 283 17 11 442 7 471 2.76e-40 151
Msa0806000 AT3G21780.1 25.840 476 306 10 9 445 2 469 3.30e-40 150
Msa0806000 AT2G26480.1 24.948 477 288 14 5 444 2 445 1.89e-39 148
Msa0806000 AT5G49690.1 29.289 478 277 20 1 446 1 449 4.96e-39 147
Msa0806000 AT3G16520.3 30.141 355 202 13 106 433 113 448 6.27e-39 147
Msa0806000 AT3G16520.1 30.056 356 201 13 106 430 113 451 1.01e-38 146
Msa0806000 AT5G05890.1 24.468 470 308 11 6 446 3 454 2.22e-38 145
Msa0806000 AT5G53990.1 25.732 478 285 16 7 448 2 445 2.89e-38 144
Msa0806000 AT1G07260.1 25.767 489 293 14 11 448 6 475 2.90e-38 145
Msa0806000 AT2G36790.1 27.689 502 298 19 6 452 4 495 3.77e-38 145
Msa0806000 AT1G51210.1 29.167 408 220 17 11 381 20 395 8.66e-38 143
Msa0806000 AT3G16520.2 30.915 317 176 11 106 395 113 413 1.13e-37 143
Msa0806000 AT5G66690.1 27.158 475 264 17 11 431 7 453 2.06e-37 143
Msa0806000 AT3G53150.1 26.667 510 284 21 5 442 16 507 4.56e-37 142
Msa0806000 AT3G21790.1 24.494 494 296 14 12 446 5 480 2.09e-36 140
Msa0806000 AT3G21750.1 25.000 480 307 11 9 446 2 470 2.60e-36 139
Msa0806000 AT5G65550.1 28.795 448 269 19 9 421 7 439 2.99e-36 139
Msa0806000 AT1G07250.1 27.049 488 296 16 1 444 1 472 1.81e-35 137
Msa0806000 AT3G21760.1 25.397 504 287 13 9 446 2 482 3.45e-35 137
Msa0806000 AT4G36770.1 27.766 461 277 13 9 428 2 447 5.10e-35 135
Msa0806000 AT1G64910.1 25.000 476 293 17 7 449 2 446 3.00e-34 133
Msa0806000 AT3G29630.1 27.235 481 275 18 8 448 3 448 4.68e-33 130
Msa0806000 AT1G07240.1 24.540 489 294 17 12 444 6 475 1.21e-32 129
Msa0806000 AT4G15280.2 23.848 499 300 14 4 444 29 505 1.51e-32 129
Msa0806000 AT4G15280.1 24.089 494 295 14 9 444 2 473 1.70e-32 129
Msa0806000 AT2G18570.1 26.050 476 294 14 11 443 5 465 2.15e-32 129
Msa0806000 AT5G54010.1 24.573 468 297 14 7 444 2 443 1.53e-31 126
Msa0806000 AT3G29630.2 27.350 468 265 16 8 448 3 422 3.81e-31 124
Msa0806000 AT5G37950.1 30.169 295 163 7 90 360 70 345 7.42e-31 122
Msa0806000 AT5G37950.2 31.186 295 154 9 90 360 70 339 2.16e-30 120
Msa0806000 AT4G27570.1 24.051 474 287 15 11 446 7 445 2.53e-29 120
Msa0806000 AT1G50580.1 25.572 481 283 19 7 448 2 446 2.99e-29 119
Msa0806000 AT2G18560.1 29.781 319 171 9 159 443 76 375 4.52e-29 118
Msa0806000 AT4G15260.1 26.902 368 217 12 114 444 2 354 1.65e-28 115
Msa0806000 AT1G64920.1 25.053 471 289 17 7 442 2 443 2.95e-28 117
Msa0806000 AT4G27560.1 23.188 483 298 15 11 455 7 454 1.44e-27 114
Msa0806000 AT5G54060.1 25.866 491 288 17 5 449 7 467 2.92e-26 111
Msa0806000 AT2G22590.1 30.542 203 129 4 254 449 273 470 5.67e-26 110
Msa0806000 AT4G09500.2 24.554 448 268 16 11 422 6 419 1.24e-25 109
Msa0806000 AT2G22930.1 21.627 467 302 12 11 444 6 441 5.05e-24 104
Msa0806000 AT1G06000.1 31.863 204 122 5 255 444 233 433 4.91e-23 101
Msa0806000 AT4G01070.2 29.063 320 184 9 6 299 3 305 5.48e-23 100
Msa0806000 AT4G09500.1 30.811 185 120 3 246 422 210 394 7.54e-21 94.7
Msa0806000 AT2G23210.1 27.305 282 174 12 6 268 5 274 4.48e-17 82.0

Find 96 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGTATTTAGAGGAAATT+TGG 0.112057 5_3:+23156125 Msa0806000:CDS
TTAATGCAATCTTCACTTAA+TGG 0.155045 5_3:-23155755 None:intergenic
GCTAAACAACATGGGATTTA+TGG 0.227646 5_3:+23153652 Msa0806000:CDS
GTGTAACCAACTTGAATTAT+TGG 0.248012 5_3:+23155985 Msa0806000:CDS
ATCAAATCTTTGTACCCTTT+TGG 0.258174 5_3:-23155935 None:intergenic
AAGGGTATGGAGCAAATTTA+TGG 0.263548 5_3:+23155729 Msa0806000:CDS
TAAGTGAAGATTGCATTAAT+TGG 0.270840 5_3:+23155759 Msa0806000:CDS
TGAAAGTTACCCTGCTTATA+TGG 0.273177 5_3:+23153828 Msa0806000:CDS
CGATACGTTTGGTGCGGTTA+TGG 0.273619 5_3:-23153440 None:intergenic
AAAGTGAAGTGAATTTCTTA+TGG 0.295838 5_3:+23155882 Msa0806000:CDS
GTTCCTTCTGCTTACTTAGA+TGG 0.303927 5_3:+23155689 Msa0806000:CDS
GCCAGATGCAAAGTATTTAG+AGG 0.322912 5_3:+23156117 Msa0806000:CDS
CTATTTCCTGCTAAATTGAT+TGG 0.338865 5_3:+23155659 Msa0806000:CDS
ATATAAGCAGGGTAACTTTC+AGG 0.345186 5_3:-23153826 None:intergenic
TGTCAATACATTTGAAGCTT+TGG 0.349021 5_3:+23153900 Msa0806000:CDS
GAGAAAGAGTTCAACATTGT+TGG 0.352328 5_3:-23153509 None:intergenic
AATGAGGTTTGAGAGTGTTT+TGG 0.357948 5_3:-23153554 None:intergenic
ATGTGTCCTTGTGCTGGGTA+TGG 0.358266 5_3:-23153334 None:intergenic
TCCTCTAAATACTTTGCATC+TGG 0.359343 5_3:-23156118 None:intergenic
CTAATTTGAATCAAGCTGAT+TGG 0.360880 5_3:+23153872 Msa0806000:CDS
AAGTGAAGTGAATTTCTTAT+GGG 0.361840 5_3:+23155883 Msa0806000:CDS
AGAATTTATGTTGAGTTTGA+AGG 0.376290 5_3:+23156198 Msa0806000:CDS
GGGCTAATGTGTCCTTGTGC+TGG 0.378473 5_3:-23153340 None:intergenic
TCCTGTTGATGAATTGCCTT+TGG 0.385043 5_3:+23153747 Msa0806000:CDS
TTAGAGGAAATTTGGGAAGT+TGG 0.386537 5_3:+23156133 Msa0806000:CDS
TCTGATGGGTTCGACGAATC+CGG 0.389070 5_3:+23153475 Msa0806000:CDS
GCAAATAGAAGAGCTGGCTT+TGG 0.394825 5_3:+23155850 Msa0806000:CDS
CAAATAGAAGAGCTGGCTTT+GGG 0.397560 5_3:+23155851 Msa0806000:CDS
AAAGTATTTAGAGGAAATTT+GGG 0.403427 5_3:+23156126 Msa0806000:CDS
CAAAGATTTGATCAAAGAAA+AGG 0.407300 5_3:+23155946 Msa0806000:CDS
TGTTGTGTGTTTGCCACAAT+GGG 0.407560 5_3:+23156084 Msa0806000:CDS
TCAGTGGTGTATATCTCATT+TGG 0.408403 5_3:+23155803 Msa0806000:CDS
ATTGTTGGCTTGTGTAAAAC+CGG 0.420407 5_3:-23153494 None:intergenic
CTGTTGTGTGTTTGCCACAA+TGG 0.421063 5_3:+23156083 Msa0806000:CDS
TCAAAACGATTAGTTTCAAA+AGG 0.423653 5_3:+23153376 Msa0806000:CDS
TGTGTCCTTGTGCTGGGTAT+GGG 0.433513 5_3:-23153333 None:intergenic
TGCTAAATTGATTGGTCCAA+TGG 0.436681 5_3:+23155667 Msa0806000:CDS
GCTAGGGATGCTGTTTCTGA+TGG 0.436704 5_3:+23156283 Msa0806000:CDS
ACCAAAGGCAATTCATCAAC+AGG 0.444274 5_3:-23153748 None:intergenic
CTCACTTCATTCAAAACCAA+TGG 0.450750 5_3:+23153529 Msa0806000:CDS
GAACAAGGAAAATTACCAAA+AGG 0.453545 5_3:+23155920 Msa0806000:CDS
GAATTCAATGGAGGAAGATC+AGG 0.457561 5_3:-23153775 None:intergenic
CATTGTGGCAAACACACAAC+AGG 0.471881 5_3:-23156082 None:intergenic
ATCTGAGCAAATAGAAGAGC+TGG 0.471976 5_3:+23155844 Msa0806000:CDS
GGCTAATGTGTCCTTGTGCT+GGG 0.473260 5_3:-23153339 None:intergenic
TTTGACGAACACAAATAAGA+TGG 0.474109 5_3:+23156345 Msa0806000:CDS
GTATATCTCATTTGGAAGCA+TGG 0.479986 5_3:+23155811 Msa0806000:CDS
TCGTCGAACCCATCAGAGAT+TGG 0.480355 5_3:-23153469 None:intergenic
ATTGGACCAATCAATTTAGC+AGG 0.490090 5_3:-23155665 None:intergenic
TCAGGAAACCTTATAAAACT+TGG 0.490909 5_3:-23153808 None:intergenic
TTAGAAGAAATGCTAGTGAA+TGG 0.500015 5_3:+23156251 Msa0806000:CDS
AGGCCAAAAGAGGATGAAAA+TGG 0.504839 5_3:+23156160 Msa0806000:CDS
AACAAGGAAAATTACCAAAA+GGG 0.508668 5_3:+23155921 Msa0806000:CDS
ATTGGTTCGACCGATACGTT+TGG 0.511541 5_3:-23153451 None:intergenic
AATACATTTGAAGCTTTGGA+AGG 0.512855 5_3:+23153904 Msa0806000:CDS
AAAGATTTGATCAAAGAAAA+GGG 0.513523 5_3:+23155947 Msa0806000:CDS
ATCAAAGGAGACAAAGGGTA+TGG 0.516111 5_3:+23155716 Msa0806000:CDS
AGTTTGAAGGTTGTGATGGA+AGG 0.520929 5_3:+23156211 Msa0806000:CDS
AATTTCATAGCCATATAAGC+AGG 0.521666 5_3:-23153838 None:intergenic
TGCTAGTGAATGGAAGAAGT+TGG 0.523356 5_3:+23156261 Msa0806000:CDS
GTGAATGGAAGAAGTTGGCT+AGG 0.530432 5_3:+23156266 Msa0806000:CDS
GGAAGATCTCTAGAATTCAA+TGG 0.531119 5_3:-23153787 None:intergenic
CTTGATGTTGCTAAACAACA+TGG 0.541379 5_3:+23153643 Msa0806000:CDS
TACTTAGATGGAAGAATCAA+AGG 0.552258 5_3:+23155701 Msa0806000:CDS
TCGGTCGAACCAATCTCTGA+TGG 0.553340 5_3:+23153460 Msa0806000:CDS
GGAAGAATCAAAGGAGACAA+AGG 0.555117 5_3:+23155710 Msa0806000:CDS
TCATACACAATGCATGTGAT+TGG 0.555679 5_3:-23153601 None:intergenic
ATTTGAAGCTTTGGAAGGAG+AGG 0.558150 5_3:+23153909 Msa0806000:CDS
AAGTAAGCAGAAGGAACCAT+TGG 0.560336 5_3:-23155683 None:intergenic
GAAGAATCAAAGGAGACAAA+GGG 0.563073 5_3:+23155711 Msa0806000:CDS
GTTGAGTTTGAAGGTTGTGA+TGG 0.568417 5_3:+23156207 Msa0806000:CDS
AGGGATGCTGTTTCTGATGG+AGG 0.568534 5_3:+23156286 Msa0806000:CDS
CATGTGCCAATAATTCAAGT+TGG 0.569238 5_3:-23155991 None:intergenic
AGTTGGTGTGAGGCCAAAAG+AGG 0.574075 5_3:+23156150 Msa0806000:CDS
CTTCCATCTAAGTAAGCAGA+AGG 0.580606 5_3:-23155692 None:intergenic
ACACTTGAGAGTCTAAGTCT+TGG 0.586395 5_3:+23156055 Msa0806000:CDS
TTGACGAACACAAATAAGAT+GGG 0.586406 5_3:+23156346 Msa0806000:CDS
CGGTCGAACCAATCTCTGAT+GGG 0.589041 5_3:+23153461 Msa0806000:CDS
TTATTGGCACATGATGCTGT+TGG 0.599016 5_3:+23156001 Msa0806000:CDS
GTTTGAAGGTTGTGATGGAA+GGG 0.604572 5_3:+23156212 Msa0806000:CDS
GGAAGATCAGGTACAACCAA+AGG 0.604962 5_3:-23153763 None:intergenic
TTTGAAGGTTGTGATGGAAG+GGG 0.608330 5_3:+23156213 Msa0806000:CDS
TGCAAAGCCATCACAATCAG+TGG 0.611111 5_3:+23155787 Msa0806000:CDS
CATAACCGCACCAAACGTAT+CGG 0.615703 5_3:+23153441 Msa0806000:CDS
TGAATGGAAGAAGTTGGCTA+GGG 0.620033 5_3:+23156267 Msa0806000:CDS
GGCAATTGATCAGCCCATTG+TGG 0.626636 5_3:-23156097 None:intergenic
AAGATGGGAAATGATTTGAG+TGG 0.640537 5_3:+23156361 Msa0806000:CDS
TTAGCAACATCAAGTGCCCA+AGG 0.641911 5_3:-23153634 None:intergenic
AAAAGGGTATAATTGTAACA+TGG 0.647818 5_3:+23155963 Msa0806000:CDS
TTGATGTTGCTAAACAACAT+GGG 0.649754 5_3:+23153644 Msa0806000:CDS
ATTTCATAGCCATATAAGCA+GGG 0.651404 5_3:-23153837 None:intergenic
AAATTTGGGAAGTTGGTGTG+AGG 0.651908 5_3:+23156140 Msa0806000:CDS
TTCGACCGATACGTTTGGTG+CGG 0.664292 5_3:-23153446 None:intergenic
ATATACACCACTGATTGTGA+TGG 0.678691 5_3:-23155794 None:intergenic
GTGATCCCATACCCAGCACA+AGG 0.680626 5_3:+23153328 Msa0806000:CDS
AGATCTCTAGAATTCAATGG+AGG 0.691278 5_3:-23153784 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCAAATACATTAATTT+TGG - chr5_3:23154011-23154030 None:intergenic 10.0%
!! AAAAAAAAAGTTAATGTATT+TGG + chr5_3:23154060-23154079 Msa0806000:intron 10.0%
!! AAAAAAAAGTTAATGTATTT+GGG + chr5_3:23154061-23154080 Msa0806000:intron 10.0%
!!! CTTTTAATTTATACTTAAAA+TGG + chr5_3:23154315-23154334 Msa0806000:intron 10.0%
!! AAAAAAAAAAATCAAAAAGA+GGG - chr5_3:23154696-23154715 None:intergenic 10.0%
!! AAAAAAAAAAAATCAAAAAG+AGG - chr5_3:23154697-23154716 None:intergenic 10.0%
!! GATATTTAGTTAATGTATTT+AGG + chr5_3:23154025-23154044 Msa0806000:intron 15.0%
!! AATAGATAGAATAAAATACT+TGG - chr5_3:23154342-23154361 None:intergenic 15.0%
!!! ATAATGGTTTCTTTAATTTA+TGG + chr5_3:23155240-23155259 Msa0806000:intron 15.0%
!!! GTTGTTCTAAAAAAAAAAAA+AGG + chr5_3:23155616-23155635 Msa0806000:intron 15.0%
!!! TTCTTTGTGTGTTTATTTTT+TGG - chr5_3:23153252-23153271 None:intergenic 20.0%
!! ATAAATAGTCATGAATATTG+TGG - chr5_3:23154201-23154220 None:intergenic 20.0%
!!! TCTTGACTTTTTGAAAATTT+TGG + chr5_3:23154749-23154768 Msa0806000:intron 20.0%
!! ATTAAAGAAACCATTATTGT+GGG - chr5_3:23155237-23155256 None:intergenic 20.0%
!! AATTAAAGAAACCATTATTG+TGG - chr5_3:23155238-23155257 None:intergenic 20.0%
!! AAAAAAAAAAAGGTTGTGAA+AGG + chr5_3:23155626-23155645 Msa0806000:intron 20.0%
!! AAAAAAAAAAGGTTGTGAAA+GGG + chr5_3:23155627-23155646 Msa0806000:intron 20.0%
!! AAAGATTTGATCAAAGAAAA+GGG + chr5_3:23155947-23155966 Msa0806000:CDS 20.0%
!!! AAAGTATTTAGAGGAAATTT+GGG + chr5_3:23156126-23156145 Msa0806000:CDS 20.0%
!!! GTTTTGAGAATTGGATTAAT+GGG - chr5_3:23153363-23153382 None:intergenic 25.0%
!!! AAACTAATCGTTTTGAGAAT+TGG - chr5_3:23153372-23153391 None:intergenic 25.0%
!!! TCAAAACGATTAGTTTCAAA+AGG + chr5_3:23153376-23153395 Msa0806000:CDS 25.0%
!!! TTTTTTGGTGTTTTTGAATG+AGG - chr5_3:23153573-23153592 None:intergenic 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG + chr5_3:23153712-23153731 Msa0806000:CDS 25.0%
!!! CTAAACACATTTCACTTTTT+TGG - chr5_3:23154269-23154288 None:intergenic 25.0%
! TGGAATAAGAAAACAATAGT+TGG - chr5_3:23154444-23154463 None:intergenic 25.0%
! AAATCACATCTTACATGTTT+GGG + chr5_3:23154608-23154627 Msa0806000:intron 25.0%
! ATTAAAAGTTGTGACGTTTA+TGG + chr5_3:23154647-23154666 Msa0806000:intron 25.0%
!! GCTTTTCTATTTGTATTTGA+AGG + chr5_3:23154717-23154736 Msa0806000:intron 25.0%
!! TGAAAATTTTGGATAGAAAC+TGG + chr5_3:23154760-23154779 Msa0806000:intron 25.0%
! TCAATATCCTTTACACTATA+TGG + chr5_3:23154820-23154839 Msa0806000:intron 25.0%
! GCAATAATAATGTTAATAGC+CGG - chr5_3:23154894-23154913 None:intergenic 25.0%
! ATTTGTAAGATTACCTGTTA+TGG - chr5_3:23154925-23154944 None:intergenic 25.0%
! TTACAAATGAAGTCTATAGA+GGG + chr5_3:23154937-23154956 Msa0806000:intron 25.0%
!! TGGTTTCTTTAATTTATGGT+TGG + chr5_3:23155244-23155263 Msa0806000:intron 25.0%
! AGAGAATACAGAAAAGAAAA+GGG - chr5_3:23155573-23155592 None:intergenic 25.0%
! AAGAGAATACAGAAAAGAAA+AGG - chr5_3:23155574-23155593 None:intergenic 25.0%
! TTAATGCAATCTTCACTTAA+TGG - chr5_3:23155758-23155777 None:intergenic 25.0%
! TAAGTGAAGATTGCATTAAT+TGG + chr5_3:23155759-23155778 Msa0806000:CDS 25.0%
! AAAGTGAAGTGAATTTCTTA+TGG + chr5_3:23155882-23155901 Msa0806000:CDS 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG + chr5_3:23155883-23155902 Msa0806000:CDS 25.0%
! AACAAGGAAAATTACCAAAA+GGG + chr5_3:23155921-23155940 Msa0806000:CDS 25.0%
! CAAAGATTTGATCAAAGAAA+AGG + chr5_3:23155946-23155965 Msa0806000:CDS 25.0%
!! AAAAGGGTATAATTGTAACA+TGG + chr5_3:23155963-23155982 Msa0806000:CDS 25.0%
!! CAAAGTATTTAGAGGAAATT+TGG + chr5_3:23156125-23156144 Msa0806000:CDS 25.0%
! AGAATTTATGTTGAGTTTGA+AGG + chr5_3:23156198-23156217 Msa0806000:CDS 25.0%
AAACCGAAAAAGAGAAAACA+TGG + chr5_3:23153270-23153289 Msa0806000:exon 30.0%
!!! CGTTTTGAGAATTGGATTAA+TGG - chr5_3:23153364-23153383 None:intergenic 30.0%
!!! TGATTGGTGTTGATGTTTTT+TGG - chr5_3:23153588-23153607 None:intergenic 30.0%
! TGTATGATTCTTTTCTACCT+TGG + chr5_3:23153617-23153636 Msa0806000:CDS 30.0%
! GTATGATTCTTTTCTACCTT+GGG + chr5_3:23153618-23153637 Msa0806000:CDS 30.0%
TTGATGTTGCTAAACAACAT+GGG + chr5_3:23153644-23153663 Msa0806000:CDS 30.0%
!! GAGATCTTCCAAGTTTTATA+AGG + chr5_3:23153800-23153819 Msa0806000:CDS 30.0%
TCAGGAAACCTTATAAAACT+TGG - chr5_3:23153811-23153830 None:intergenic 30.0%
ATTTCATAGCCATATAAGCA+GGG - chr5_3:23153840-23153859 None:intergenic 30.0%
AATTTCATAGCCATATAAGC+AGG - chr5_3:23153841-23153860 None:intergenic 30.0%
CTAATTTGAATCAAGCTGAT+TGG + chr5_3:23153872-23153891 Msa0806000:CDS 30.0%
! TGTCAATACATTTGAAGCTT+TGG + chr5_3:23153900-23153919 Msa0806000:CDS 30.0%
!! AATACATTTGAAGCTTTGGA+AGG + chr5_3:23153904-23153923 Msa0806000:CDS 30.0%
GTGAATACTTTAGTCATGAA+TGG - chr5_3:23153966-23153985 None:intergenic 30.0%
GAAATCACATCTTACATGTT+TGG + chr5_3:23154607-23154626 Msa0806000:intron 30.0%
TCCTTTACACTATATGGATT+AGG + chr5_3:23154826-23154845 Msa0806000:intron 30.0%
TCCTAATCCATATAGTGTAA+AGG - chr5_3:23154830-23154849 None:intergenic 30.0%
!! TTTACACTATATGGATTAGG+AGG + chr5_3:23154829-23154848 Msa0806000:intron 30.0%
TTGTGTCTTTAAATCTCACA+TGG - chr5_3:23154857-23154876 None:intergenic 30.0%
ATGTGAGATTTAAAGACACA+AGG + chr5_3:23154856-23154875 Msa0806000:intron 30.0%
CTTACAAATGAAGTCTATAG+AGG + chr5_3:23154936-23154955 Msa0806000:intron 30.0%
TACAAATGAAGTCTATAGAG+GGG + chr5_3:23154938-23154957 Msa0806000:intron 30.0%
CAAATTACTTCTCTGATGAT+TGG - chr5_3:23155023-23155042 None:intergenic 30.0%
CAATCATCAGAGAAGTAATT+TGG + chr5_3:23155021-23155040 Msa0806000:intron 30.0%
TGACTCAAAATTGGTTACTT+TGG + chr5_3:23155271-23155290 Msa0806000:intron 30.0%
AAATAGGTGGCTTAATTGTT+TGG + chr5_3:23155331-23155350 Msa0806000:intron 30.0%
!!! AGTGTCTCATATTTTTAGAG+AGG + chr5_3:23155379-23155398 Msa0806000:intron 30.0%
!!! GTGTCTCATATTTTTAGAGA+GGG + chr5_3:23155380-23155399 Msa0806000:intron 30.0%
ATGTAAGACCAATATTAGCA+AGG - chr5_3:23155424-23155443 None:intergenic 30.0%
! CTTTTCAGAAGGTAGTAAAT+CGG - chr5_3:23155535-23155554 None:intergenic 30.0%
! TAAACCAAAACCTTTTCAGA+AGG - chr5_3:23155546-23155565 None:intergenic 30.0%
AGAATACAGAAAAGAAAAGG+GGG - chr5_3:23155571-23155590 None:intergenic 30.0%
GAGAATACAGAAAAGAAAAG+GGG - chr5_3:23155572-23155591 None:intergenic 30.0%
CTATTTCCTGCTAAATTGAT+TGG + chr5_3:23155659-23155678 Msa0806000:CDS 30.0%
TACTTAGATGGAAGAATCAA+AGG + chr5_3:23155701-23155720 Msa0806000:CDS 30.0%
GAACAAGGAAAATTACCAAA+AGG + chr5_3:23155920-23155939 Msa0806000:CDS 30.0%
! ATCAAATCTTTGTACCCTTT+TGG - chr5_3:23155938-23155957 None:intergenic 30.0%
GTGTAACCAACTTGAATTAT+TGG + chr5_3:23155985-23156004 Msa0806000:CDS 30.0%
TTAGAAGAAATGCTAGTGAA+TGG + chr5_3:23156251-23156270 Msa0806000:CDS 30.0%
TTTGACGAACACAAATAAGA+TGG + chr5_3:23156345-23156364 Msa0806000:CDS 30.0%
TTGACGAACACAAATAAGAT+GGG + chr5_3:23156346-23156365 Msa0806000:CDS 30.0%
! CCACCATGTTTTCTCTTTTT+CGG - chr5_3:23153276-23153295 None:intergenic 35.0%
!! ATTGTTGGCTTGTGTAAAAC+CGG - chr5_3:23153497-23153516 None:intergenic 35.0%
GAGAAAGAGTTCAACATTGT+TGG - chr5_3:23153512-23153531 None:intergenic 35.0%
CTCACTTCATTCAAAACCAA+TGG + chr5_3:23153529-23153548 Msa0806000:CDS 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG - chr5_3:23153557-23153576 None:intergenic 35.0%
TCATACACAATGCATGTGAT+TGG - chr5_3:23153604-23153623 None:intergenic 35.0%
CTTGATGTTGCTAAACAACA+TGG + chr5_3:23153643-23153662 Msa0806000:CDS 35.0%
GCTAAACAACATGGGATTTA+TGG + chr5_3:23153652-23153671 Msa0806000:CDS 35.0%
!! AGATCTCTAGAATTCAATGG+AGG - chr5_3:23153787-23153806 None:intergenic 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG - chr5_3:23153790-23153809 None:intergenic 35.0%
ATATAAGCAGGGTAACTTTC+AGG - chr5_3:23153829-23153848 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG + chr5_3:23153828-23153847 Msa0806000:CDS 35.0%
TTAATCCAAAAGGACAAAGG+TGG - chr5_3:23155050-23155069 None:intergenic 35.0%
GCTTTAATCCAAAAGGACAA+AGG - chr5_3:23155053-23155072 None:intergenic 35.0%
!! AGTGTTGGCTTTAATCCAAA+AGG - chr5_3:23155060-23155079 None:intergenic 35.0%
AATTCGGATAGCGTTTGTAT+TGG + chr5_3:23155134-23155153 Msa0806000:intron 35.0%
ATTATTGTGGGCAATCTCAA+TGG - chr5_3:23155225-23155244 None:intergenic 35.0%
ATTGAGATTGCCCACAATAA+TGG + chr5_3:23155224-23155243 Msa0806000:intron 35.0%
! GTTGGAAACTGACTCAAAAT+TGG + chr5_3:23155262-23155281 Msa0806000:intron 35.0%
TTCCTTGGGTCTTACAAAAT+AGG + chr5_3:23155315-23155334 Msa0806000:intron 35.0%
TCTATTGTACTCTCCTCTAA+TGG - chr5_3:23155489-23155508 None:intergenic 35.0%
AGAGTACAATAGAGATAGGT+TGG + chr5_3:23155496-23155515 Msa0806000:intron 35.0%
GAGTACAATAGAGATAGGTT+GGG + chr5_3:23155497-23155516 Msa0806000:intron 35.0%
AAGGTAGTAAATCGGAAGTT+GGG - chr5_3:23155527-23155546 None:intergenic 35.0%
! CGATTTACTACCTTCTGAAA+AGG + chr5_3:23155533-23155552 Msa0806000:intron 35.0%
!! ACTACCTTCTGAAAAGGTTT+TGG + chr5_3:23155539-23155558 Msa0806000:intron 35.0%
CAATTTAGCAGGAAATAGCT+CGG - chr5_3:23155657-23155676 None:intergenic 35.0%
ATTGGACCAATCAATTTAGC+AGG - chr5_3:23155668-23155687 None:intergenic 35.0%
! TGCTAAATTGATTGGTCCAA+TGG + chr5_3:23155667-23155686 Msa0806000:CDS 35.0%
GAAGAATCAAAGGAGACAAA+GGG + chr5_3:23155711-23155730 Msa0806000:CDS 35.0%
! AAGGGTATGGAGCAAATTTA+TGG + chr5_3:23155729-23155748 Msa0806000:CDS 35.0%
! ATATACACCACTGATTGTGA+TGG - chr5_3:23155797-23155816 None:intergenic 35.0%
TCAGTGGTGTATATCTCATT+TGG + chr5_3:23155803-23155822 Msa0806000:CDS 35.0%
GTATATCTCATTTGGAAGCA+TGG + chr5_3:23155811-23155830 Msa0806000:CDS 35.0%
!!! GTTTTAAGAGAGTCAGAACA+AGG + chr5_3:23155905-23155924 Msa0806000:CDS 35.0%
CATGTGCCAATAATTCAAGT+TGG - chr5_3:23155994-23156013 None:intergenic 35.0%
TCCTCTAAATACTTTGCATC+TGG - chr5_3:23156121-23156140 None:intergenic 35.0%
TTAGAGGAAATTTGGGAAGT+TGG + chr5_3:23156133-23156152 Msa0806000:CDS 35.0%
! ACACCATTTTCATCCTCTTT+TGG - chr5_3:23156166-23156185 None:intergenic 35.0%
AAGATGGGAAATGATTTGAG+TGG + chr5_3:23156361-23156380 Msa0806000:CDS 35.0%
CCGAAAAAGAGAAAACATGG+TGG + chr5_3:23153273-23153292 Msa0806000:exon 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG - chr5_3:23153548-23153567 None:intergenic 40.0%
! TCCTGTTGATGAATTGCCTT+TGG + chr5_3:23153747-23153766 Msa0806000:CDS 40.0%
ACCAAAGGCAATTCATCAAC+AGG - chr5_3:23153751-23153770 None:intergenic 40.0%
GAATTCAATGGAGGAAGATC+AGG - chr5_3:23153778-23153797 None:intergenic 40.0%
!! ATTTGAAGCTTTGGAAGGAG+AGG + chr5_3:23153909-23153928 Msa0806000:CDS 40.0%
GAACATGCATGCCTTCAAAA+CGG - chr5_3:23154802-23154821 None:intergenic 40.0%
TTAAAGACACAAGGATGCAC+TGG + chr5_3:23154865-23154884 Msa0806000:intron 40.0%
ATTGCTCAAACTGCCATAAC+AGG + chr5_3:23154909-23154928 Msa0806000:intron 40.0%
TGGATTAAAGCCAACACTGA+CGG + chr5_3:23155062-23155081 Msa0806000:intron 40.0%
! CGAATTTCTGAAGATACCTC+CGG - chr5_3:23155120-23155139 None:intergenic 40.0%
!! CGGAGGTATCTTCAGAAATT+CGG + chr5_3:23155118-23155137 Msa0806000:intron 40.0%
! TGGTTGTTTCACTCAATCTC+TGG + chr5_3:23155154-23155173 Msa0806000:intron 40.0%
! GGTTGTTTCACTCAATCTCT+GGG + chr5_3:23155155-23155174 Msa0806000:intron 40.0%
! GTTGTTTCACTCAATCTCTG+GGG + chr5_3:23155156-23155175 Msa0806000:intron 40.0%
TTGTTTCACTCAATCTCTGG+GGG + chr5_3:23155157-23155176 Msa0806000:intron 40.0%
! GGCTTTCAAGTCTATTTCCT+TGG + chr5_3:23155292-23155311 Msa0806000:intron 40.0%
AGTCTATTTCCTTGGTTCCT+TGG + chr5_3:23155300-23155319 Msa0806000:intron 40.0%
GTCTATTTCCTTGGTTCCTT+GGG + chr5_3:23155301-23155320 Msa0806000:intron 40.0%
! CACCTATTTTGTAAGACCCA+AGG - chr5_3:23155320-23155339 None:intergenic 40.0%
CTTGGGTCTTACAAAATAGG+TGG + chr5_3:23155318-23155337 Msa0806000:intron 40.0%
GCTGACATCCTTGCTAATAT+TGG + chr5_3:23155413-23155432 Msa0806000:intron 40.0%
! TGTCCTCGTCTGAATTGTTT+TGG + chr5_3:23155444-23155463 Msa0806000:intron 40.0%
AGACCAAAACAATTCAGACG+AGG - chr5_3:23155450-23155469 None:intergenic 40.0%
TTATTGCCTGACTCCATTAG+AGG + chr5_3:23155473-23155492 Msa0806000:intron 40.0%
! GAGGAGAGTACAATAGAGAT+AGG + chr5_3:23155492-23155511 Msa0806000:intron 40.0%
GAAGGTAGTAAATCGGAAGT+TGG - chr5_3:23155528-23155547 None:intergenic 40.0%
AAGTAAGCAGAAGGAACCAT+TGG - chr5_3:23155686-23155705 None:intergenic 40.0%
GTTCCTTCTGCTTACTTAGA+TGG + chr5_3:23155689-23155708 Msa0806000:CDS 40.0%
CTTCCATCTAAGTAAGCAGA+AGG - chr5_3:23155695-23155714 None:intergenic 40.0%
GGAAGAATCAAAGGAGACAA+AGG + chr5_3:23155710-23155729 Msa0806000:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG + chr5_3:23155716-23155735 Msa0806000:CDS 40.0%
ATCTGAGCAAATAGAAGAGC+TGG + chr5_3:23155844-23155863 Msa0806000:CDS 40.0%
!! CAAATAGAAGAGCTGGCTTT+GGG + chr5_3:23155851-23155870 Msa0806000:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG + chr5_3:23156001-23156020 Msa0806000:CDS 40.0%
! GGATGTTTTGTGACACATTG+TGG + chr5_3:23156022-23156041 Msa0806000:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG + chr5_3:23156026-23156045 Msa0806000:CDS 40.0%
ACACTTGAGAGTCTAAGTCT+TGG + chr5_3:23156055-23156074 Msa0806000:CDS 40.0%
TGTTGTGTGTTTGCCACAAT+GGG + chr5_3:23156084-23156103 Msa0806000:CDS 40.0%
! GCCAGATGCAAAGTATTTAG+AGG + chr5_3:23156117-23156136 Msa0806000:CDS 40.0%
!! AAATTTGGGAAGTTGGTGTG+AGG + chr5_3:23156140-23156159 Msa0806000:CDS 40.0%
AGGCCAAAAGAGGATGAAAA+TGG + chr5_3:23156160-23156179 Msa0806000:CDS 40.0%
GTTGAGTTTGAAGGTTGTGA+TGG + chr5_3:23156207-23156226 Msa0806000:CDS 40.0%
! AGTTTGAAGGTTGTGATGGA+AGG + chr5_3:23156211-23156230 Msa0806000:CDS 40.0%
! GTTTGAAGGTTGTGATGGAA+GGG + chr5_3:23156212-23156231 Msa0806000:CDS 40.0%
! TTTGAAGGTTGTGATGGAAG+GGG + chr5_3:23156213-23156232 Msa0806000:CDS 40.0%
TGCTAGTGAATGGAAGAAGT+TGG + chr5_3:23156261-23156280 Msa0806000:CDS 40.0%
TGAATGGAAGAAGTTGGCTA+GGG + chr5_3:23156267-23156286 Msa0806000:CDS 40.0%
CATAACCGCACCAAACGTAT+CGG + chr5_3:23153441-23153460 Msa0806000:CDS 45.0%
!! ATTGGTTCGACCGATACGTT+TGG - chr5_3:23153454-23153473 None:intergenic 45.0%
TTAGCAACATCAAGTGCCCA+AGG - chr5_3:23153637-23153656 None:intergenic 45.0%
GGAAGATCAGGTACAACCAA+AGG - chr5_3:23153766-23153785 None:intergenic 45.0%
AGTCTATAGAGGGGATATGC+AGG + chr5_3:23154947-23154966 Msa0806000:intron 45.0%
AAGTAAACATTCATCCCCCG+AGG + chr5_3:23154994-23155013 Msa0806000:intron 45.0%
AGTAAACATTCATCCCCCGA+GGG + chr5_3:23154995-23155014 Msa0806000:intron 45.0%
GACAAAGAACCCAAACAGAG+CGG + chr5_3:23155091-23155110 Msa0806000:intron 45.0%
TTGTAAGACCCAAGGAACCA+AGG - chr5_3:23155312-23155331 None:intergenic 45.0%
ATTAGCAAGGATGTCAGCAC+AGG - chr5_3:23155411-23155430 None:intergenic 45.0%
TACTCTCCTCTAATGGAGTC+AGG - chr5_3:23155482-23155501 None:intergenic 45.0%
TGCAAAGCCATCACAATCAG+TGG + chr5_3:23155787-23155806 Msa0806000:CDS 45.0%
! GCAAATAGAAGAGCTGGCTT+TGG + chr5_3:23155850-23155869 Msa0806000:CDS 45.0%
CATTGTGGCAAACACACAAC+AGG - chr5_3:23156085-23156104 None:intergenic 45.0%
CTGTTGTGTGTTTGCCACAA+TGG + chr5_3:23156083-23156102 Msa0806000:CDS 45.0%
GTGAATGGAAGAAGTTGGCT+AGG + chr5_3:23156266-23156285 Msa0806000:CDS 45.0%
!!! GAAAATAAATTAATTTTATT+TGG + chr5_3:23154159-23154178 Msa0806000:intron 5.0%
!!! AAACAATTTTTTTTTTTTTT+TGG - chr5_3:23154464-23154483 None:intergenic 5.0%
TGTGTCCTTGTGCTGGGTAT+GGG - chr5_3:23153336-23153355 None:intergenic 50.0%
ATGTGTCCTTGTGCTGGGTA+TGG - chr5_3:23153337-23153356 None:intergenic 50.0%
GGCTAATGTGTCCTTGTGCT+GGG - chr5_3:23153342-23153361 None:intergenic 50.0%
!! CGATACGTTTGGTGCGGTTA+TGG - chr5_3:23153443-23153462 None:intergenic 50.0%
! TTCGACCGATACGTTTGGTG+CGG - chr5_3:23153449-23153468 None:intergenic 50.0%
TCGGTCGAACCAATCTCTGA+TGG + chr5_3:23153460-23153479 Msa0806000:CDS 50.0%
CGGTCGAACCAATCTCTGAT+GGG + chr5_3:23153461-23153480 Msa0806000:CDS 50.0%
TCGTCGAACCCATCAGAGAT+TGG - chr5_3:23153472-23153491 None:intergenic 50.0%
!! TCTGATGGGTTCGACGAATC+CGG + chr5_3:23153475-23153494 Msa0806000:CDS 50.0%
TTCAAAACGGTCCTGCACTG+AGG - chr5_3:23154789-23154808 None:intergenic 50.0%
! TCAGTGCAGGACCGTTTTGA+AGG + chr5_3:23154788-23154807 Msa0806000:intron 50.0%
GAGGGGATATGCAGGAATTC+AGG + chr5_3:23154955-23154974 Msa0806000:intron 50.0%
TCTCTGATGATTGGAGCCCT+CGG - chr5_3:23155014-23155033 None:intergenic 50.0%
! GGTCACCACCTTTGTCCTTT+TGG + chr5_3:23155042-23155061 Msa0806000:intron 50.0%
GGCAATTGATCAGCCCATTG+TGG - chr5_3:23156100-23156119 None:intergenic 50.0%
! AGTTGGTGTGAGGCCAAAAG+AGG + chr5_3:23156150-23156169 Msa0806000:CDS 50.0%
!! GCTAGGGATGCTGTTTCTGA+TGG + chr5_3:23156283-23156302 Msa0806000:CDS 50.0%
!! AGGGATGCTGTTTCTGATGG+AGG + chr5_3:23156286-23156305 Msa0806000:CDS 50.0%
GTGATCCCATACCCAGCACA+AGG + chr5_3:23153328-23153347 Msa0806000:CDS 55.0%
GGGCTAATGTGTCCTTGTGC+TGG - chr5_3:23153343-23153362 None:intergenic 55.0%
! GAAACTGGTCTCCTCAGTGC+AGG + chr5_3:23154775-23154794 Msa0806000:intron 55.0%
CACAAGGATGCACTGGAAGC+CGG + chr5_3:23154872-23154891 Msa0806000:intron 55.0%
TCTGATGATTGGAGCCCTCG+GGG - chr5_3:23155012-23155031 None:intergenic 55.0%
CTCTGATGATTGGAGCCCTC+GGG - chr5_3:23155013-23155032 None:intergenic 55.0%
CTGATGATTGGAGCCCTCGG+GGG - chr5_3:23155011-23155030 None:intergenic 60.0%
TGTCGCTGCACCGTCAGTGT+TGG - chr5_3:23155075-23155094 None:intergenic 60.0%
AACCCAAACAGAGCGGCTGC+CGG + chr5_3:23155098-23155117 Msa0806000:intron 60.0%
CTCCGGCAGCCGCTCTGTTT+GGG - chr5_3:23155103-23155122 None:intergenic 65.0%
CCTCCGGCAGCCGCTCTGTT+TGG - chr5_3:23155104-23155123 None:intergenic 70.0%
CCAAACAGAGCGGCTGCCGG+AGG + chr5_3:23155101-23155120 Msa0806000:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 23153247 23156390 23153247 ID=Msa0806000;Name=Msa0806000
chr5_3 mRNA 23153247 23156390 23153247 ID=Msa0806000-mRNA-1;Parent=Msa0806000;Name=Msa0806000-mRNA-1;_AED=0.22;_eAED=0.22;_QI=42|0|0.5|1|1|1|2|0|457
chr5_3 exon 23153247 23153930 23153247 ID=Msa0806000-mRNA-1:exon:9207;Parent=Msa0806000-mRNA-1
chr5_3 exon 23155659 23156390 23155659 ID=Msa0806000-mRNA-1:exon:9208;Parent=Msa0806000-mRNA-1
chr5_3 five_prime_UTR 23153247 23153288 23153247 ID=Msa0806000-mRNA-1:five_prime_utr;Parent=Msa0806000-mRNA-1
chr5_3 CDS 23153289 23153930 23153289 ID=Msa0806000-mRNA-1:cds;Parent=Msa0806000-mRNA-1
chr5_3 CDS 23155659 23156390 23155659 ID=Msa0806000-mRNA-1:cds;Parent=Msa0806000-mRNA-1
Gene Sequence

>Msa0806000

ATGGTGGAACATAGTGAAAACAACAACGTTCATGTGTTAGTGATCCCATACCCAGCACAAGGACACATTAGCCCATTAATCCAATTCTCAAAACGATTAGTTTCAAAAGGCATCAAAACAACATTTGCAACAACACATTACACTGTTCAATCCATAACCGCACCAAACGTATCGGTCGAACCAATCTCTGATGGGTTCGACGAATCCGGTTTTACACAAGCCAACAATGTTGAACTCTTTCTCACTTCATTCAAAACCAATGGTTCCAAAACACTCTCAAACCTCATTCAAAAACACCAAAAAACATCAACACCAATCACATGCATTGTGTATGATTCTTTTCTACCTTGGGCACTTGATGTTGCTAAACAACATGGGATTTATGGTGCTGCATTTTTCACTAATTCTGCTGCTGTTTGTAACATTTTTTGTCGTATACATCATGGTTTGATCGAAACTCCTGTTGATGAATTGCCTTTGGTTGTACCTGATCTTCCTCCATTGAATTCTAGAGATCTTCCAAGTTTTATAAGGTTTCCTGAAAGTTACCCTGCTTATATGGCTATGAAATTGAGTCAATTCTCTAATTTGAATCAAGCTGATTGGATGTTTGTCAATACATTTGAAGCTTTGGAAGGAGAGCTATTTCCTGCTAAATTGATTGGTCCAATGGTTCCTTCTGCTTACTTAGATGGAAGAATCAAAGGAGACAAAGGGTATGGAGCAAATTTATGGAAGCCATTAAGTGAAGATTGCATTAATTGGTTAAATGCAAAGCCATCACAATCAGTGGTGTATATCTCATTTGGAAGCATGGTTTCTTTAACATCTGAGCAAATAGAAGAGCTGGCTTTGGGATTAAAAGAAAGTGAAGTGAATTTCTTATGGGTTTTAAGAGAGTCAGAACAAGGAAAATTACCAAAAGGGTACAAAGATTTGATCAAAGAAAAGGGTATAATTGTAACATGGTGTAACCAACTTGAATTATTGGCACATGATGCTGTTGGATGTTTTGTGACACATTGTGGTTGGAATTCAACACTTGAGAGTCTAAGTCTTGGTGTTCCTGTTGTGTGTTTGCCACAATGGGCTGATCAATTGCCAGATGCAAAGTATTTAGAGGAAATTTGGGAAGTTGGTGTGAGGCCAAAAGAGGATGAAAATGGTGTTGTAAAGAGAGAAGAATTTATGTTGAGTTTGAAGGTTGTGATGGAAGGGGAAAGAAGTGAAGTGATTAGAAGAAATGCTAGTGAATGGAAGAAGTTGGCTAGGGATGCTGTTTCTGATGGAGGTAGCTCTGATAAGAATATTAATGAGTTTGTGAATCATTTGACGAACACAAATAAGATGGGAAATGATTTGAGTGGTTTCTAG
Protein sequence

>Msa0806000

MVEHSENNNVHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVQSITAPNVSVEPISDGFDESGFTQANNVELFLTSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAKQHGIYGAAFFTNSAAVCNIFCRIHHGLIETPVDELPLVVPDLPPLNSRDLPSFIRFPESYPAYMAMKLSQFSNLNQADWMFVNTFEALEGELFPAKLIGPMVPSAYLDGRIKGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRESEQGKLPKGYKDLIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWADQLPDAKYLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMEGERSEVIRRNASEWKKLARDAVSDGGSSDKNINEFVNHLTNTNKMGNDLSGF*