AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0805950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805950 MtrunA17_Chr5g0414331 96.996 466 14 0 1 466 1 466 0.0 934
Msa0805950 MtrunA17_Chr5g0414321 93.886 458 28 0 9 466 7 464 0.0 900
Msa0805950 MtrunA17_Chr6g0464871 49.891 457 224 2 3 455 13 468 9.45e-167 478
Msa0805950 MtrunA17_Chr6g0464841 49.234 457 227 2 3 455 1 456 1.44e-166 477
Msa0805950 MtrunA17_Chr6g0464861 49.342 456 227 2 3 455 1 455 8.63e-161 462
Msa0805950 MtrunA17_Chr6g0464881 48.315 445 225 2 13 453 11 454 8.81e-159 457
Msa0805950 MtrunA17_Chr8g0380531 47.162 458 227 4 10 456 7 460 8.24e-152 439
Msa0805950 MtrunA17_Chr6g0464921 46.861 446 233 1 13 454 11 456 4.05e-150 435
Msa0805950 MtrunA17_Chr7g0249981 46.771 449 234 4 10 455 22 468 1.19e-149 435
Msa0805950 MtrunA17_Chr7g0250001 44.966 447 241 4 10 453 3 447 6.01e-144 419
Msa0805950 MtrunA17_Chr7g0249931 44.543 449 240 7 11 453 38 483 6.03e-133 392
Msa0805950 MtrunA17_Chr8g0377921 41.432 461 243 14 14 451 5 461 1.25e-112 340
Msa0805950 MtrunA17_Chr3g0121991 39.958 473 252 12 10 453 76 545 1.06e-106 327
Msa0805950 MtrunA17_Chr8g0377941 38.723 470 242 14 14 453 8 461 6.84e-102 312
Msa0805950 MtrunA17_Chr1g0207981 36.966 468 268 8 12 456 12 475 9.96e-101 310
Msa0805950 MtrunA17_Chr3g0098111 37.500 472 259 12 12 455 8 471 2.29e-98 303
Msa0805950 MtrunA17_Chr3g0122001 38.186 474 260 12 10 453 3 473 3.47e-95 307
Msa0805950 MtrunA17_Chr3g0122001 38.254 481 263 12 3 453 476 952 2.58e-93 302
Msa0805950 MtrunA17_Chr1g0207861 38.004 471 260 11 11 455 6 470 1.59e-93 291
Msa0805950 MtrunA17_Chr4g0053501 36.229 472 264 12 11 457 9 468 4.56e-92 288
Msa0805950 MtrunA17_Chr1g0207971 35.230 457 273 7 11 453 6 453 8.50e-92 286
Msa0805950 MtrunA17_Chr1g0161351 37.313 469 262 11 11 453 35 497 3.03e-89 281
Msa0805950 MtrunA17_Chr1g0207831 33.891 478 289 9 8 464 3 474 1.49e-87 275
Msa0805950 MtrunA17_Chr4g0053321 36.192 478 264 12 7 457 20 483 1.21e-86 274
Msa0805950 MtrunA17_Chr7g0250021 41.905 315 176 4 11 320 10 322 7.76e-85 264
Msa0805950 MtrunA17_Chr1g0207951 35.512 459 274 9 12 453 655 1108 8.84e-83 276
Msa0805950 MtrunA17_Chr1g0207951 33.775 453 284 6 12 453 123 570 1.84e-82 275
Msa0805950 MtrunA17_Chr8g0365811 34.927 481 279 10 12 464 494 968 9.16e-83 274
Msa0805950 MtrunA17_Chr8g0365811 35.924 476 273 11 12 458 8 480 2.25e-80 268
Msa0805950 MtrunA17_Chr7g0249961 50.201 249 121 3 217 464 24 270 8.16e-82 254
Msa0805950 MtrunA17_Chr1g0207931 34.839 465 222 11 12 453 91 497 7.23e-80 256
Msa0805950 MtrunA17_Chr5g0401721 33.682 478 281 13 12 460 7 477 2.71e-79 254
Msa0805950 MtrunA17_Chr3g0118691 32.292 480 284 11 5 450 7 479 5.92e-77 248
Msa0805950 MtrunA17_Chr3g0118671 31.006 487 287 10 9 457 2 477 1.54e-76 247
Msa0805950 MtrunA17_Chr3g0092641 33.610 482 264 14 13 453 12 478 3.66e-76 246
Msa0805950 MtrunA17_Chr5g0393591 32.328 464 246 9 13 453 17 435 8.83e-76 244
Msa0805950 MtrunA17_Chr3g0118711 32.359 479 283 12 13 457 13 484 2.20e-75 244
Msa0805950 MtrunA17_Chr5g0426431 33.474 475 273 13 10 450 9 474 1.07e-74 242
Msa0805950 MtrunA17_Chr3g0118701 32.292 480 286 12 13 459 15 488 1.57e-74 242
Msa0805950 MtrunA17_Chr3g0118771 31.301 492 289 11 6 459 14 494 7.46e-74 240
Msa0805950 MtrunA17_Chr3g0078841 31.470 483 282 12 9 453 6 477 3.82e-71 233
Msa0805950 MtrunA17_Chr2g0278711 31.656 477 279 14 13 453 11 476 1.22e-70 232
Msa0805950 MtrunA17_Chr6g0454341 30.417 480 285 11 9 450 6 474 1.73e-68 226
Msa0805950 MtrunA17_Chr6g0453951 30.801 487 282 12 9 453 53 526 3.61e-68 226
Msa0805950 MtrunA17_Chr7g0217881 31.522 460 282 11 13 450 10 458 5.70e-67 221
Msa0805950 MtrunA17_Chr6g0454191 30.977 481 276 14 13 450 10 477 4.48e-66 220
Msa0805950 MtrunA17_Chr7g0218791 31.466 464 271 13 11 451 3 442 3.27e-65 216
Msa0805950 MtrunA17_Chr6g0454321 30.490 469 277 12 9 439 6 463 6.66e-65 221
Msa0805950 MtrunA17_Chr6g0454301 29.752 484 289 11 9 453 259 730 1.63e-64 221
Msa0805950 MtrunA17_Chr6g0454301 33.906 233 141 6 224 450 1 226 6.71e-37 144
Msa0805950 MtrunA17_Chr6g0454401 29.792 480 291 12 9 450 6 477 3.97e-64 214
Msa0805950 MtrunA17_Chr3g0118661 32.041 490 288 15 1 456 1 479 6.11e-64 214
Msa0805950 MtrunA17_Chr4g0050341 30.705 482 277 11 13 450 19 487 9.67e-64 214
Msa0805950 MtrunA17_Chr8g0336331 29.228 479 291 11 9 450 6 473 1.97e-63 213
Msa0805950 MtrunA17_Chr6g0454361 30.722 485 271 15 13 448 11 479 2.50e-63 213
Msa0805950 MtrunA17_Chr6g0454331 30.041 486 281 15 13 453 7 478 5.85e-63 211
Msa0805950 MtrunA17_Chr5g0431401 30.252 476 272 15 9 455 6 450 8.59e-63 210
Msa0805950 MtrunA17_Chr5g0431361 29.792 480 280 15 5 455 4 455 1.90e-62 209
Msa0805950 MtrunA17_Chr6g0454141 29.079 478 288 13 13 450 10 476 2.65e-62 210
Msa0805950 MtrunA17_Chr8g0359821 29.787 470 276 13 13 441 10 466 3.74e-62 209
Msa0805950 MtrunA17_Chr3g0118751 29.583 480 270 11 13 459 6 450 1.02e-61 207
Msa0805950 MtrunA17_Chr7g0218811 31.223 458 271 14 13 451 15 447 1.43e-61 207
Msa0805950 MtrunA17_Chr5g0431421 29.565 460 286 11 9 450 6 445 2.39e-61 206
Msa0805950 MtrunA17_Chr6g0454291 31.185 481 274 15 13 450 7 473 3.39e-61 207
Msa0805950 MtrunA17_Chr7g0218841 31.057 454 275 14 13 450 6 437 6.48e-61 205
Msa0805950 MtrunA17_Chr6g0454151 31.328 482 270 17 13 450 10 474 1.09e-60 206
Msa0805950 MtrunA17_Chr6g0454121 30.105 475 286 14 13 450 10 475 2.37e-60 204
Msa0805950 MtrunA17_Chr7g0218831 31.209 455 272 14 13 450 6 436 3.70e-60 203
Msa0805950 MtrunA17_Chr6g0452771 29.769 477 286 14 13 450 10 476 7.35e-60 203
Msa0805950 MtrunA17_Chr7g0243631 29.860 499 301 12 1 458 1 491 9.40e-60 203
Msa0805950 MtrunA17_Chr6g0454261 30.126 478 283 18 13 450 10 476 2.28e-59 202
Msa0805950 MtrunA17_Chr5g0431371 29.228 479 265 14 13 455 10 450 2.61e-59 201
Msa0805950 MtrunA17_Chr6g0454131 30.672 476 282 15 13 450 10 475 3.61e-59 201
Msa0805950 MtrunA17_Chr6g0453961 29.498 478 287 15 13 450 19 486 3.79e-59 202
Msa0805950 MtrunA17_Chr4g0032331 33.120 468 266 17 14 457 9 453 8.53e-59 200
Msa0805950 MtrunA17_Chr3g0112761 31.590 459 279 11 13 453 8 449 1.40e-58 199
Msa0805950 MtrunA17_Chr8g0336691 32.582 488 251 18 11 449 917 1375 2.52e-58 207
Msa0805950 MtrunA17_Chr8g0336691 29.960 494 276 13 1 449 1 469 1.78e-55 199
Msa0805950 MtrunA17_Chr8g0336691 31.906 467 254 17 11 449 478 908 4.19e-51 186
Msa0805950 MtrunA17_Chr6g0454201 29.583 480 283 13 13 450 11 477 3.20e-58 199
Msa0805950 MtrunA17_Chr7g0218821 30.426 470 270 14 13 451 5 448 4.30e-58 198
Msa0805950 MtrunA17_Chr6g0454211 30.785 484 278 16 13 453 297 766 1.39e-57 203
Msa0805950 MtrunA17_Chr6g0454211 31.760 233 114 9 164 392 61 252 3.48e-22 100
Msa0805950 MtrunA17_Chr4g0044511 30.785 497 272 19 7 455 34 506 1.87e-57 197
Msa0805950 MtrunA17_Chr5g0412111 32.158 482 269 21 13 457 5 465 2.50e-57 196
Msa0805950 MtrunA17_Chr3g0118721 36.140 285 170 5 173 450 7 286 4.47e-57 191
Msa0805950 MtrunA17_Chr6g0454351 28.778 483 278 11 7 450 6 461 4.90e-57 196
Msa0805950 MtrunA17_Chr5g0423981 29.501 461 273 14 13 450 10 441 6.71e-57 194
Msa0805950 MtrunA17_Chr7g0243681 30.522 498 290 16 3 458 1 484 1.09e-56 195
Msa0805950 MtrunA17_Chr8g0336651 32.158 482 263 15 11 449 779 1239 1.11e-56 202
Msa0805950 MtrunA17_Chr8g0336651 28.274 481 291 12 11 455 4 466 2.15e-49 181
Msa0805950 MtrunA17_Chr8g0336651 36.604 265 130 6 193 449 536 770 2.37e-42 160
Msa0805950 MtrunA17_Chr5g0412131 31.733 479 276 15 13 457 12 473 1.46e-56 194
Msa0805950 MtrunA17_Chr5g0431441 30.271 479 275 16 13 458 18 470 1.91e-56 194
Msa0805950 MtrunA17_Chr7g0232391 29.835 486 276 12 12 455 5 467 4.62e-56 193
Msa0805950 MtrunA17_Chr6g0454181 28.838 482 284 14 13 450 10 476 1.35e-55 192
Msa0805950 MtrunA17_Chr1g0153451 30.802 474 277 13 11 450 4 460 1.42e-55 192
Msa0805950 MtrunA17_Chr5g0412101 31.667 480 276 18 13 457 12 474 3.57e-55 191
Msa0805950 MtrunA17_Chr5g0440421 30.754 491 277 17 13 450 10 490 4.04e-55 191
Msa0805950 MtrunA17_Chr3g0106231 30.652 460 280 14 13 456 18 454 4.77e-55 190
Msa0805950 MtrunA17_Chr8g0339631 29.607 483 286 12 11 455 4 470 6.39e-55 190
Msa0805950 MtrunA17_Chr8g0373301 30.309 485 277 14 13 458 9 471 1.78e-54 189
Msa0805950 MtrunA17_Chr7g0232411 29.448 489 270 13 11 452 4 464 2.15e-54 189
Msa0805950 MtrunA17_Chr3g0112771 30.064 469 289 13 4 453 3 451 2.69e-54 188
Msa0805950 MtrunA17_Chr7g0232331 29.814 483 275 14 13 453 6 466 5.04e-54 187
Msa0805950 MtrunA17_Chr7g0232401 29.916 478 284 13 12 453 5 467 7.26e-54 187
Msa0805950 MtrunA17_Chr8g0361371 29.303 488 266 17 14 450 8 467 2.94e-53 186
Msa0805950 MtrunA17_Chr7g0275511 30.162 494 273 15 14 461 16 483 6.01e-53 185
Msa0805950 MtrunA17_Chr7g0243931 29.058 499 303 16 2 458 6 495 6.41e-53 185
Msa0805950 MtrunA17_Chr5g0426401 32.588 313 194 6 148 453 8 310 1.85e-52 179
Msa0805950 MtrunA17_Chr8g0347281 29.607 483 254 13 14 446 19 465 2.11e-52 183
Msa0805950 MtrunA17_Chr8g0339451 32.283 381 216 9 104 455 98 465 2.13e-52 183
Msa0805950 MtrunA17_Chr6g0449931 29.814 483 254 15 13 442 6 456 2.27e-52 183
Msa0805950 MtrunA17_Chr6g0459311 28.279 488 264 14 14 449 14 467 2.29e-52 183
Msa0805950 MtrunA17_Chr8g0336741 28.807 486 276 13 8 449 8 467 2.34e-52 183
Msa0805950 MtrunA17_Chr8g0339461 29.046 482 291 10 12 455 5 473 3.72e-52 182
Msa0805950 MtrunA17_Chr7g0232341 29.158 487 285 13 13 459 6 472 4.54e-52 182
Msa0805950 MtrunA17_Chr6g0454251 30.576 399 224 12 13 368 7 395 1.34e-51 179
Msa0805950 MtrunA17_Chr8g0334831 29.592 490 271 17 14 450 7 475 2.26e-51 181
Msa0805950 MtrunA17_Chr7g0243771 30.426 493 274 20 10 453 3 475 2.51e-51 181
Msa0805950 MtrunA17_Chr4g0060511 29.365 504 296 18 3 458 1 492 2.92e-51 181
Msa0805950 MtrunA17_Chr8g0366391 29.792 480 295 17 9 453 5 477 3.00e-51 181
Msa0805950 MtrunA17_Chr7g0275681 29.518 498 287 18 2 453 1 480 5.11e-51 180
Msa0805950 MtrunA17_Chr8g0336731 29.675 492 281 14 1 450 19 487 1.59e-50 179
Msa0805950 MtrunA17_Chr6g0486251 28.398 493 261 15 10 447 3 458 1.84e-50 178
Msa0805950 MtrunA17_Chr6g0486201 28.398 493 261 15 10 447 3 458 1.84e-50 178
Msa0805950 MtrunA17_Chr6g0462531 32.967 364 217 10 94 442 102 453 1.86e-50 178
Msa0805950 MtrunA17_Chr7g0235051 28.834 489 270 16 3 451 1 451 3.61e-50 177
Msa0805950 MtrunA17_Chr7g0243801 30.297 505 269 22 3 453 1 476 3.62e-50 177
Msa0805950 MtrunA17_Chr8g0335161 29.072 485 288 13 9 455 2 468 4.20e-50 177
Msa0805950 MtrunA17_Chr8g0335141 28.630 489 284 12 9 455 5 470 1.27e-49 176
Msa0805950 MtrunA17_Chr7g0243951 27.800 500 305 18 3 458 1 488 2.37e-49 176
Msa0805950 MtrunA17_Chr5g0419771 29.495 495 289 21 10 456 33 515 2.41e-49 176
Msa0805950 MtrunA17_Chr8g0347271 29.140 477 264 12 14 446 20 466 2.52e-49 175
Msa0805950 MtrunA17_Chr6g0462521 33.333 375 202 11 96 449 99 446 2.65e-49 174
Msa0805950 MtrunA17_Chr8g0334851 30.277 469 282 12 13 447 6 463 2.75e-49 175
Msa0805950 MtrunA17_Chr7g0232311 28.099 484 273 11 13 450 6 460 3.75e-49 174
Msa0805950 MtrunA17_Chr7g0243861 29.200 500 297 17 4 458 5 492 4.63e-49 175
Msa0805950 MtrunA17_Chr4g0072761 28.205 468 295 10 7 455 9 454 5.59e-49 174
Msa0805950 MtrunA17_Chr6g0462571 32.440 373 221 11 96 451 101 459 1.53e-48 173
Msa0805950 MtrunA17_Chr7g0243871 28.629 496 287 16 1 453 1 472 2.90e-48 172
Msa0805950 MtrunA17_Chr5g0401851 29.106 481 294 14 15 455 12 485 4.47e-48 172
Msa0805950 MtrunA17_Chr6g0462551 32.845 341 188 11 134 451 140 462 4.99e-48 172
Msa0805950 MtrunA17_Chr5g0420801 29.916 478 280 14 9 453 3 458 1.06e-47 171
Msa0805950 MtrunA17_Chr4g0072771 27.862 463 296 10 12 455 24 467 1.22e-47 170
Msa0805950 MtrunA17_Chr6g0462541 32.011 378 215 12 96 451 104 461 4.53e-47 169
Msa0805950 MtrunA17_Chr5g0429711 28.953 487 284 16 7 457 5 465 8.45e-47 168
Msa0805950 MtrunA17_Chr5g0448551 28.355 462 294 13 14 457 8 450 9.97e-47 167
Msa0805950 MtrunA17_Chr7g0243781 28.713 505 278 20 1 453 1 475 1.35e-46 168
Msa0805950 MtrunA17_Chr5g0442561 27.310 487 293 13 13 455 5 474 1.70e-46 167
Msa0805950 MtrunA17_Chr7g0265041 28.287 502 297 18 1 453 1 488 1.98e-46 168
Msa0805950 MtrunA17_Chr2g0329111 29.555 494 283 18 14 458 7 484 2.05e-46 167
Msa0805950 MtrunA17_Chr4g0066151 28.333 480 285 16 14 453 19 479 3.13e-46 167
Msa0805950 MtrunA17_Chr1g0159551 27.049 488 281 15 7 454 8 460 5.01e-46 166
Msa0805950 MtrunA17_Chr8g0334861 30.087 462 268 12 19 454 32 464 8.52e-46 166
Msa0805950 MtrunA17_Chr4g0066261 29.184 490 271 16 17 453 15 481 8.54e-46 166
Msa0805950 MtrunA17_Chr5g0442521 27.383 493 286 14 14 455 6 477 3.09e-45 164
Msa0805950 MtrunA17_Chr4g0044501 29.202 476 298 17 10 453 7 475 3.42e-45 164
Msa0805950 MtrunA17_Chr4g0066201 28.400 500 280 19 3 455 8 476 3.99e-45 164
Msa0805950 MtrunA17_Chr8g0369341 29.124 491 277 18 9 453 3 468 5.18e-45 163
Msa0805950 MtrunA17_Chr4g0066221 28.542 480 286 17 17 453 15 480 5.25e-45 164
Msa0805950 MtrunA17_Chr5g0448521 27.092 502 272 15 12 455 4 469 6.38e-45 163
Msa0805950 MtrunA17_Chr1g0153461 39.437 213 112 2 260 455 2 214 1.10e-44 155
Msa0805950 MtrunA17_Chr7g0265101 29.600 500 283 21 12 458 8 491 1.68e-44 162
Msa0805950 MtrunA17_Chr3g0079731 27.664 488 285 13 14 450 7 477 1.77e-44 162
Msa0805950 MtrunA17_Chr4g0066131 27.160 486 283 14 14 453 14 474 1.97e-44 162
Msa0805950 MtrunA17_Chr6g0454271 32.753 287 180 7 173 453 7 286 1.97e-44 157
Msa0805950 MtrunA17_Chr7g0265141 28.773 497 284 20 9 452 5 484 5.67e-44 160
Msa0805950 MtrunA17_Chr5g0442601 26.423 492 293 14 14 455 405 877 1.89e-43 164
Msa0805950 MtrunA17_Chr5g0442601 27.679 336 183 10 79 390 34 333 1.18e-27 116
Msa0805950 MtrunA17_Chr7g0265051 29.058 499 285 22 12 458 8 489 1.96e-43 159
Msa0805950 MtrunA17_Chr5g0442541 27.551 490 281 15 13 455 5 467 2.53e-43 159
Msa0805950 MtrunA17_Chr8g0339601 32.812 320 169 7 165 455 30 332 3.54e-43 155
Msa0805950 MtrunA17_Chr1g0173121 26.186 485 292 14 7 454 8 463 5.02e-43 158
Msa0805950 MtrunA17_Chr4g0011051 28.715 498 281 21 12 453 8 487 5.24e-43 158
Msa0805950 MtrunA17_Chr5g0432731 33.887 301 163 10 167 450 12 293 1.48e-42 152
Msa0805950 MtrunA17_Chr5g0419761 26.358 497 296 20 11 452 7 488 2.17e-42 157
Msa0805950 MtrunA17_Chr7g0243761 29.659 499 268 18 3 458 1 459 3.02e-42 155
Msa0805950 MtrunA17_Chr1g0179901 27.143 490 308 17 10 456 13 496 3.36e-42 156
Msa0805950 MtrunA17_Chr5g0442491 27.088 491 289 14 14 455 6 476 3.72e-42 155
Msa0805950 MtrunA17_Chr8g0370941 28.545 536 262 23 13 463 8 507 8.96e-42 155
Msa0805950 MtrunA17_Chr4g0044521 29.106 481 288 15 12 457 8 470 1.02e-41 154
Msa0805950 MtrunA17_Chr4g0014061 29.065 492 268 21 14 453 10 472 1.85e-41 154
Msa0805950 MtrunA17_Chr3g0106251 33.969 262 154 7 201 456 48 296 2.62e-41 149
Msa0805950 MtrunA17_Chr5g0442581 26.337 486 297 13 14 453 6 476 2.74e-41 154
Msa0805950 MtrunA17_Chr8g0374971 25.826 484 299 14 14 453 13 480 3.49e-41 153
Msa0805950 MtrunA17_Chr2g0307961 27.515 487 302 13 1 454 1 469 6.61e-41 152
Msa0805950 MtrunA17_Chr8g0374901 25.880 483 294 16 16 453 15 478 6.99e-41 152
Msa0805950 MtrunA17_Chr6g0463861 27.216 485 283 17 17 455 15 475 1.08e-40 152
Msa0805950 MtrunA17_Chr8g0339441 39.070 215 111 2 261 455 217 431 1.09e-40 150
Msa0805950 MtrunA17_Chr7g0265111 27.733 494 303 14 10 458 36 520 1.72e-40 152
Msa0805950 MtrunA17_Chr4g0066171 28.571 497 278 21 3 453 11 476 1.85e-40 151
Msa0805950 MtrunA17_Chr7g0243711 34.661 251 145 6 225 458 73 321 1.94e-40 147
Msa0805950 MtrunA17_Chr4g0066281 27.824 478 277 17 17 453 16 466 5.06e-40 150
Msa0805950 MtrunA17_Chr5g0429681 27.629 485 284 17 14 457 45 503 1.66e-39 149
Msa0805950 MtrunA17_Chr7g0265151 26.829 492 300 18 12 454 8 488 1.76e-39 149
Msa0805950 MtrunA17_Chr6g0463851 25.941 478 303 15 17 453 15 482 3.40e-39 148
Msa0805950 MtrunA17_Chr8g0374931 27.673 477 295 13 17 453 15 481 3.44e-39 148
Msa0805950 MtrunA17_Chr8g0382021 25.103 486 280 14 18 454 39 489 4.02e-39 147
Msa0805950 MtrunA17_Chr6g0454221 35.776 232 139 5 224 450 1 227 4.64e-39 143
Msa0805950 MtrunA17_Chr2g0294921 27.197 478 296 14 17 453 164 630 5.14e-39 149
Msa0805950 MtrunA17_Chr2g0302961 26.994 489 283 17 13 454 5 466 1.45e-38 145
Msa0805950 MtrunA17_Chr5g0428081 26.327 471 307 12 17 453 15 479 1.86e-38 145
Msa0805950 MtrunA17_Chr8g0374941 26.434 488 295 18 16 457 952 1421 2.39e-38 149
Msa0805950 MtrunA17_Chr8g0374941 25.957 470 284 18 16 439 14 465 3.19e-35 139
Msa0805950 MtrunA17_Chr8g0374941 25.107 466 285 16 16 435 479 926 2.02e-33 134
Msa0805950 MtrunA17_Chr6g0463891 26.829 492 294 15 11 453 10 484 3.76e-38 145
Msa0805950 MtrunA17_Chr7g0243851 25.506 494 283 14 3 458 1 447 4.12e-38 144
Msa0805950 MtrunA17_Chr5g0416741 25.150 501 309 15 1 453 1 483 7.56e-38 144
Msa0805950 MtrunA17_Chr5g0416821 27.071 495 297 18 1 453 1 473 1.23e-37 143
Msa0805950 MtrunA17_Chr2g0278721 28.092 477 300 15 2 453 4 462 1.34e-37 146
Msa0805950 MtrunA17_Chr2g0278721 27.536 483 298 18 9 457 513 977 2.42e-31 128
Msa0805950 MtrunA17_Chr4g0044481 29.323 399 233 15 13 390 27 397 1.40e-37 142
Msa0805950 MtrunA17_Chr7g0232351 28.713 404 212 14 11 367 4 378 2.10e-37 140
Msa0805950 MtrunA17_Chr8g0361411 29.167 480 282 18 13 462 8 459 3.42e-37 142
Msa0805950 MtrunA17_Chr8g0355221 29.301 372 228 13 111 455 125 488 4.26e-37 142
Msa0805950 MtrunA17_Chr6g0466831 27.004 474 307 14 2 453 4 460 1.12e-36 140
Msa0805950 MtrunA17_Chr4g0042891 29.424 486 277 16 12 455 6 467 1.18e-36 140
Msa0805950 MtrunA17_Chr2g0278741 27.004 474 303 13 3 453 87 540 3.33e-36 140
Msa0805950 MtrunA17_Chr7g0218311 27.463 477 293 17 17 453 20 483 4.11e-36 139
Msa0805950 MtrunA17_Chr8g0355011 27.000 400 209 11 81 450 12 358 7.61e-36 136
Msa0805950 MtrunA17_Chr8g0350881 26.166 493 294 19 14 457 13 484 1.12e-35 138
Msa0805950 MtrunA17_Chr4g0029131 26.782 463 272 16 9 434 8 440 1.21e-35 140
Msa0805950 MtrunA17_Chr2g0294931 26.263 495 301 14 12 459 10 487 1.37e-35 138
Msa0805950 MtrunA17_Chr6g0466841 26.585 489 290 17 2 453 4 460 1.77e-35 137
Msa0805950 MtrunA17_Chr1g0165701 26.033 484 306 16 12 455 14 485 2.40e-35 137
Msa0805950 MtrunA17_Chr4g0069611 27.111 450 291 12 5 431 4 439 2.62e-35 136
Msa0805950 MtrunA17_Chr5g0431431 29.032 403 205 14 13 406 10 340 2.73e-35 134
Msa0805950 MtrunA17_Chr4g0042931 29.363 487 274 17 12 455 6 465 5.31e-35 135
Msa0805950 MtrunA17_Chr5g0410941 26.850 473 300 16 17 453 27 489 7.35e-35 135
Msa0805950 MtrunA17_Chr5g0403641 27.143 490 256 16 9 446 55 495 1.26e-34 135
Msa0805950 MtrunA17_Chr7g0241781 26.490 453 285 13 13 453 9 425 1.58e-34 134
Msa0805950 MtrunA17_Chr6g0464091 28.364 483 286 18 8 453 8 467 1.81e-34 134
Msa0805950 MtrunA17_Chr7g0243611 32.639 288 161 10 117 390 3 271 2.23e-34 130
Msa0805950 MtrunA17_Chr7g0241801 26.477 457 286 13 10 453 6 425 2.47e-34 133
Msa0805950 MtrunA17_Chr5g0409591 24.945 457 277 14 14 416 5 449 2.99e-34 134
Msa0805950 MtrunA17_Chr2g0302851 25.904 498 298 18 2 462 4 467 4.53e-34 133
Msa0805950 MtrunA17_Chr1g0196851 25.738 474 277 16 5 434 38 480 1.61e-33 132
Msa0805950 MtrunA17_Chr7g0243911 32.751 229 123 4 237 449 3 216 3.09e-33 125
Msa0805950 MtrunA17_Chr6g0482061 25.678 479 284 15 13 441 11 467 6.22e-33 130
Msa0805950 MtrunA17_Chr5g0442511 24.948 485 280 16 13 453 49 493 7.95e-33 130
Msa0805950 MtrunA17_Chr2g0283041 25.630 476 305 13 10 458 4 457 1.29e-32 129
Msa0805950 MtrunA17_Chr2g0302991 27.366 486 282 17 13 454 5 463 1.34e-32 129
Msa0805950 MtrunA17_Chr4g0039881 26.651 439 268 14 23 431 2 416 1.82e-32 128
Msa0805950 MtrunA17_Chr4g0029151 27.386 482 279 20 9 453 16 463 2.02e-32 128
Msa0805950 MtrunA17_Chr7g0243811 32.180 289 160 10 110 382 99 367 1.52e-31 125
Msa0805950 MtrunA17_Chr8g0367221 26.058 449 290 12 12 431 797 1232 1.78e-31 128
Msa0805950 MtrunA17_Chr8g0367221 23.849 478 304 16 12 453 1287 1740 1.59e-30 125
Msa0805950 MtrunA17_Chr8g0367221 24.468 470 314 13 12 455 11 465 4.62e-30 124
Msa0805950 MtrunA17_Chr6g0454371 35.057 174 105 3 284 453 1 170 2.50e-30 115
Msa0805950 MtrunA17_Chr1g0207881 44.697 132 71 1 324 453 253 384 4.48e-30 120
Msa0805950 MtrunA17_Chr1g0207881 30.370 270 164 7 12 274 7 259 1.08e-28 117
Msa0805950 MtrunA17_Chr6g0454171 31.538 260 145 9 201 450 70 306 8.24e-30 118
Msa0805950 MtrunA17_Chr2g0294941 26.050 357 227 9 110 438 17 364 2.23e-29 118
Msa0805950 MtrunA17_Chr3g0092031 33.663 202 127 3 264 462 6 203 4.90e-29 113
Msa0805950 MtrunA17_Chr4g0040691 25.771 454 279 14 12 431 7 436 6.51e-29 118
Msa0805950 MtrunA17_Chr4g0040711 24.664 446 294 12 12 431 7 436 8.67e-27 112
Msa0805950 MtrunA17_Chr8g0336251 24.779 452 290 14 10 427 4 439 1.35e-26 112
Msa0805950 MtrunA17_Chr8g0336321 24.779 452 290 14 10 427 4 439 1.78e-26 111
Msa0805950 MtrunA17_Chr8g0337381 43.443 122 67 1 328 449 2 121 2.41e-26 103
Msa0805950 MtrunA17_Chr3g0079711 36.066 183 97 4 288 450 3 185 4.31e-26 104
Msa0805950 MtrunA17_Chr6g0454231 31.538 260 130 9 199 451 2 220 1.20e-24 106
Msa0805950 MtrunA17_Chr6g0454231 24.686 239 139 7 9 213 246 477 4.36e-11 64.7
Msa0805950 MtrunA17_Chr4g0029161 25.108 462 253 18 9 434 8 412 2.59e-24 104
Msa0805950 MtrunA17_Chr2g0319801 26.013 469 287 16 10 443 5 448 6.63e-24 103
Msa0805950 MtrunA17_Chr8g0357361 38.060 134 78 3 261 390 117 249 1.06e-23 100
Msa0805950 MtrunA17_Chr2g0319761 27.416 445 283 16 12 431 7 436 6.79e-23 100
Msa0805950 MtrunA17_Chr1g0207911 28.980 245 156 5 8 236 3 245 9.47e-23 97.4
Msa0805950 MtrunA17_Chr2g0319731 25.427 468 291 15 10 443 22 465 1.55e-22 100
Msa0805950 MtrunA17_Chr7g0231631 29.730 259 157 6 208 453 13 259 1.74e-22 97.1
Msa0805950 MtrunA17_Chr5g0427571 29.386 228 144 5 206 427 57 273 4.20e-22 96.3
Msa0805950 MtrunA17_Chr8g0336261 37.226 137 78 3 284 416 1 133 2.56e-21 89.7
Msa0805950 MtrunA17_Chr4g0066141 34.375 160 90 5 308 453 193 351 9.17e-21 93.6
Msa0805950 MtrunA17_Chr6g0453941 26.821 302 168 9 9 308 7 257 1.73e-19 88.2
Msa0805950 MtrunA17_Chr2g0319751 24.025 487 290 15 12 453 484 935 3.88e-19 90.9
Msa0805950 MtrunA17_Chr2g0319751 23.702 443 274 17 12 429 7 410 4.05e-16 81.3
Msa0805950 MtrunA17_Chr2g0319791 35.519 183 108 5 257 429 252 434 8.64e-19 88.6
Msa0805950 MtrunA17_Chr6g0453981 34.247 146 93 3 164 308 61 204 1.70e-18 84.3
Msa0805950 MtrunA17_Chr8g0377911 37.037 135 76 4 14 141 8 140 2.09e-18 82.4
Msa0805950 MtrunA17_Chr7g0249971 48.684 76 37 1 10 83 8 83 3.99e-18 80.5
Msa0805950 MtrunA17_Chr2g0321331 33.714 175 92 5 265 431 87 245 2.57e-17 82.0
Msa0805950 MtrunA17_Chr5g0442501 25.460 326 204 9 14 320 6 311 1.65e-16 80.1
Msa0805950 MtrunA17_Chr8g0334841 34.524 168 93 6 164 328 1 154 1.02e-15 75.1
Msa0805950 MtrunA17_Chr3g0079721 34.973 183 100 8 108 280 113 286 9.01e-15 74.7
Msa0805950 MtrunA17_Chr5g0426411 28.758 153 94 4 10 149 9 159 1.83e-13 68.6
Msa0805950 MtrunA17_Chr8g0336271 23.265 245 150 6 9 221 6 244 2.20e-13 70.5
Msa0805950 MtrunA17_Chr7g0243721 36.937 111 66 2 206 314 34 142 4.30e-13 66.6
Msa0805950 MtrunA17_Chr6g0469961 31.737 167 87 6 148 304 15 164 9.79e-13 66.2
Msa0805950 MtrunA17_Chr6g0454111 27.972 143 98 4 164 304 44 183 6.68e-12 64.3
Msa0805950 MtrunA17_Chr7g0243731 40.541 74 44 0 324 397 5 78 4.01e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805950 AT1G24100.1 51.770 452 203 6 13 453 11 458 1.55e-167 480
Msa0805950 AT2G43820.1 48.107 449 216 7 13 453 7 446 1.58e-152 441
Msa0805950 AT2G43840.2 48.780 451 210 9 13 453 7 446 1.53e-149 434
Msa0805950 AT2G43840.1 48.559 451 211 9 13 453 7 446 1.73e-148 431
Msa0805950 AT1G05675.1 46.358 453 219 4 13 450 6 449 1.03e-139 409
Msa0805950 AT1G05680.1 45.434 449 229 4 13 450 6 449 1.16e-136 401
Msa0805950 AT2G31750.1 44.667 450 231 6 13 450 8 451 2.15e-129 383
Msa0805950 AT2G31750.2 44.079 456 237 6 13 456 8 457 5.49e-129 383
Msa0805950 AT2G31790.1 43.584 452 243 6 13 454 8 457 9.70e-128 379
Msa0805950 AT4G15480.1 35.282 479 277 9 1 453 7 478 1.05e-98 305
Msa0805950 AT4G15490.1 34.694 490 266 11 9 462 4 475 7.40e-97 300
Msa0805950 AT3G21560.1 34.557 463 279 7 13 453 12 472 2.06e-96 299
Msa0805950 AT1G05530.1 37.687 467 248 11 13 453 5 454 4.46e-96 297
Msa0805950 AT1G05560.1 37.076 472 257 10 13 461 5 459 2.52e-95 296
Msa0805950 AT1G05560.2 37.076 472 257 10 13 461 55 509 4.64e-95 296
Msa0805950 AT4G15500.1 34.904 467 281 10 13 461 9 470 3.65e-93 290
Msa0805950 AT4G14090.1 35.118 467 273 12 1 451 1 453 8.40e-87 273
Msa0805950 AT4G15550.1 33.682 478 261 13 13 452 13 472 3.26e-82 262
Msa0805950 AT2G23260.1 34.658 453 277 12 13 454 10 454 1.19e-79 255
Msa0805950 AT2G23250.1 34.009 444 272 13 22 456 7 438 8.12e-78 249
Msa0805950 AT1G22380.1 33.962 477 270 14 13 453 13 480 1.81e-77 250
Msa0805950 AT1G22400.1 32.484 471 280 10 13 450 13 478 5.94e-75 243
Msa0805950 AT1G22360.1 30.947 475 287 10 13 453 10 477 2.57e-73 239
Msa0805950 AT2G28080.1 29.936 471 291 9 17 461 22 479 4.58e-73 238
Msa0805950 AT2G36970.1 30.189 477 285 11 13 455 10 472 7.69e-73 238
Msa0805950 AT1G78270.1 32.075 477 275 13 13 451 13 478 3.75e-72 236
Msa0805950 AT1G22340.1 30.361 471 290 10 13 450 13 478 6.46e-72 236
Msa0805950 AT1G22370.2 33.191 470 278 13 13 453 13 475 1.21e-70 232
Msa0805950 AT1G22360.2 29.895 475 280 10 13 453 10 465 1.87e-68 226
Msa0805950 AT2G30140.2 33.262 466 274 15 9 457 9 454 3.21e-65 217
Msa0805950 AT2G30140.1 33.191 467 274 15 9 457 9 455 8.87e-65 216
Msa0805950 AT5G17050.1 30.297 472 283 11 9 455 8 458 1.16e-61 208
Msa0805950 AT3G02100.1 31.974 466 269 15 13 451 13 457 5.26e-61 206
Msa0805950 AT2G15490.3 30.550 491 275 14 11 453 5 477 7.60e-61 206
Msa0805950 AT3G46670.1 31.749 463 271 14 13 453 9 448 1.16e-60 205
Msa0805950 AT2G15480.1 30.346 491 288 16 5 453 2 480 1.42e-60 206
Msa0805950 AT2G15490.1 29.960 494 277 13 11 453 5 480 8.58e-60 204
Msa0805950 AT2G15480.2 30.219 503 283 17 5 453 2 490 9.63e-60 204
Msa0805950 AT2G30150.2 31.034 464 277 15 13 455 13 454 2.53e-59 201
Msa0805950 AT3G46660.1 30.983 468 273 13 14 456 15 457 2.74e-58 199
Msa0805950 AT4G01070.1 30.146 481 263 12 13 447 8 461 7.18e-58 198
Msa0805950 AT2G30150.1 30.870 460 275 15 17 455 1 438 1.01e-57 197
Msa0805950 AT1G01420.2 30.769 481 281 13 3 448 1 464 6.85e-57 196
Msa0805950 AT1G01420.1 31.013 474 275 13 10 448 5 461 1.14e-56 195
Msa0805950 AT5G59590.1 29.724 471 270 14 13 453 10 449 3.72e-56 193
Msa0805950 AT5G05870.1 29.915 468 290 11 9 454 4 455 8.75e-56 192
Msa0805950 AT5G17040.1 30.044 456 287 10 11 453 3 439 9.51e-56 192
Msa0805950 AT5G59580.1 30.573 471 277 17 13 459 9 453 1.08e-54 189
Msa0805950 AT1G10400.1 28.992 476 291 16 11 455 5 464 1.33e-54 189
Msa0805950 AT3G46650.1 30.586 461 267 13 13 456 10 434 1.15e-53 186
Msa0805950 AT4G34131.1 29.209 493 294 20 5 455 2 481 5.66e-53 185
Msa0805950 AT1G30530.1 30.519 462 283 14 13 456 12 453 1.18e-52 184
Msa0805950 AT5G38010.1 29.707 478 279 11 6 453 3 453 2.22e-52 183
Msa0805950 AT2G16890.2 29.707 478 288 13 13 457 9 471 3.09e-52 183
Msa0805950 AT5G38040.1 31.489 470 247 16 21 453 18 449 6.18e-52 182
Msa0805950 AT2G36760.1 27.869 488 296 13 4 446 5 481 9.76e-51 180
Msa0805950 AT1G73880.1 30.675 489 281 19 2 455 3 468 6.41e-50 177
Msa0805950 AT5G17030.1 28.662 471 291 14 9 455 8 457 8.12e-50 176
Msa0805950 AT2G36780.1 27.921 505 304 17 4 461 5 496 9.88e-50 177
Msa0805950 AT5G05880.1 28.632 475 283 15 9 455 4 450 2.90e-49 175
Msa0805950 AT1G22370.1 35.690 297 179 7 164 453 14 305 5.14e-49 170
Msa0805950 AT5G05860.1 29.122 467 291 14 6 453 2 447 5.33e-49 174
Msa0805950 AT3G46690.1 27.983 461 292 10 13 453 9 449 8.92e-49 173
Msa0805950 AT1G01390.1 29.253 482 278 10 10 450 5 464 1.31e-48 174
Msa0805950 AT1G01390.2 29.253 482 278 10 10 450 22 481 1.95e-48 174
Msa0805950 AT3G46700.1 28.387 465 280 16 13 453 9 444 2.00e-48 172
Msa0805950 AT5G14860.1 28.980 490 287 17 13 458 8 480 1.50e-47 171
Msa0805950 AT3G46680.1 28.384 458 290 10 13 451 9 447 2.76e-47 169
Msa0805950 AT2G36750.1 29.098 488 289 15 5 447 2 477 3.78e-47 170
Msa0805950 AT3G55710.1 30.277 469 277 15 13 453 8 454 8.24e-47 168
Msa0805950 AT4G34135.1 27.088 491 308 14 5 455 3 483 1.20e-46 168
Msa0805950 AT5G03490.1 29.956 454 289 13 13 450 19 459 1.67e-46 167
Msa0805950 AT2G36770.1 26.389 504 313 16 4 461 5 496 4.15e-46 167
Msa0805950 AT3G11340.1 26.154 455 301 13 14 453 10 444 4.26e-46 166
Msa0805950 AT3G46720.1 30.786 458 274 16 13 453 9 440 7.19e-46 166
Msa0805950 AT5G05900.1 27.623 467 295 14 9 454 4 448 9.45e-46 165
Msa0805950 AT2G36800.1 27.586 493 298 16 2 447 1 481 1.02e-45 166
Msa0805950 AT4G34138.1 27.181 493 290 18 10 454 8 479 3.29e-45 164
Msa0805950 AT3G53160.1 28.200 500 293 20 9 458 4 487 6.61e-45 164
Msa0805950 AT3G55700.1 28.633 461 291 15 13 453 8 450 3.40e-44 161
Msa0805950 AT5G17040.2 32.423 293 181 4 164 453 59 337 1.42e-43 157
Msa0805950 AT3G16520.3 30.278 360 218 12 108 450 113 456 3.03e-43 159
Msa0805950 AT3G22250.1 28.884 457 255 15 14 425 9 440 9.97e-43 157
Msa0805950 AT2G29710.1 27.824 478 302 15 10 457 2 466 2.57e-42 156
Msa0805950 AT3G21800.1 26.210 496 296 11 10 455 2 477 4.00e-42 156
Msa0805950 AT2G29740.1 27.642 492 288 12 9 453 4 474 4.95e-42 155
Msa0805950 AT3G16520.1 30.312 353 211 12 108 439 113 451 7.12e-42 155
Msa0805950 AT2G29730.1 27.331 472 298 15 10 450 2 459 1.17e-41 154
Msa0805950 AT5G53990.1 25.902 471 298 14 10 457 3 445 1.35e-41 154
Msa0805950 AT3G16520.2 31.529 314 185 10 108 404 113 413 1.83e-41 154
Msa0805950 AT5G26310.1 28.753 473 279 17 13 446 7 460 1.98e-41 154
Msa0805950 AT2G16890.3 28.941 425 255 12 13 405 9 418 2.10e-41 153
Msa0805950 AT5G12890.1 26.761 497 287 15 10 452 7 480 3.09e-41 154
Msa0805950 AT5G05890.1 26.013 469 307 12 9 455 4 454 3.46e-41 153
Msa0805950 AT3G50740.1 28.221 489 279 16 13 452 7 472 4.56e-41 153
Msa0805950 AT2G26480.1 27.505 469 275 16 13 450 8 442 6.88e-41 152
Msa0805950 AT2G36790.1 27.723 505 311 17 1 461 1 495 7.33e-41 153
Msa0805950 AT2G29750.1 27.586 493 290 17 9 455 4 475 5.73e-40 150
Msa0805950 AT3G53150.1 26.453 499 298 18 10 450 19 506 7.98e-40 150
Msa0805950 AT5G49690.1 28.753 473 276 19 12 455 9 449 2.80e-39 148
Msa0805950 AT5G65550.1 28.870 478 284 20 11 455 7 461 1.39e-38 146
Msa0805950 AT1G07260.1 27.366 486 296 16 13 457 6 475 3.87e-38 145
Msa0805950 AT3G21790.1 25.051 495 301 14 13 455 4 480 5.46e-38 145
Msa0805950 AT5G66690.1 27.215 474 272 16 13 440 7 453 8.38e-38 144
Msa0805950 AT3G21780.1 24.689 482 309 10 12 454 3 469 1.67e-37 143
Msa0805950 AT4G36770.1 27.824 478 262 15 11 437 2 447 5.65e-37 141
Msa0805950 AT1G64910.1 26.427 473 287 18 9 455 2 439 5.68e-37 141
Msa0805950 AT1G51210.1 28.499 393 249 13 13 390 20 395 7.55e-37 140
Msa0805950 AT3G21750.1 24.898 490 302 13 11 455 2 470 7.40e-36 139
Msa0805950 AT2G18570.1 26.205 477 279 15 13 442 5 455 3.47e-35 137
Msa0805950 AT3G21760.1 24.852 507 293 13 11 455 2 482 8.53e-35 135
Msa0805950 AT5G54010.1 24.841 471 299 13 9 453 2 443 9.32e-35 135
Msa0805950 AT3G29630.1 26.582 474 294 17 10 457 3 448 6.29e-34 133
Msa0805950 AT1G07250.1 26.763 482 295 18 14 453 7 472 6.30e-34 133
Msa0805950 AT4G15280.2 25.911 494 303 17 3 450 26 502 2.95e-33 132
Msa0805950 AT3G29630.2 26.923 468 274 15 10 457 3 422 3.90e-33 130
Msa0805950 AT1G07240.1 24.380 484 302 15 14 450 6 472 4.03e-33 131
Msa0805950 AT4G15280.1 25.926 486 297 17 11 450 2 470 3.04e-32 128
Msa0805950 AT1G64920.1 26.349 482 291 19 9 460 2 449 8.02e-32 127
Msa0805950 AT2G18560.1 30.696 316 173 9 161 449 76 372 1.00e-31 125
Msa0805950 AT4G27570.1 23.629 474 296 13 13 455 7 445 4.45e-31 125
Msa0805950 AT4G27560.1 23.431 478 304 13 13 459 7 453 4.66e-30 122
Msa0805950 AT5G37950.1 28.814 295 174 5 92 369 70 345 5.63e-30 120
Msa0805950 AT5G37950.2 29.831 295 165 8 92 369 70 339 1.95e-29 118
Msa0805950 AT1G50580.1 25.887 479 291 18 9 457 2 446 2.26e-29 120
Msa0805950 AT4G09500.2 24.026 462 300 13 13 455 6 435 2.52e-29 119
Msa0805950 AT2G22590.1 24.280 486 306 17 9 458 11 470 6.65e-29 119
Msa0805950 AT4G15260.1 26.829 369 217 11 116 450 2 351 8.56e-28 114
Msa0805950 AT2G22930.1 22.009 468 306 13 13 453 6 441 3.39e-27 114
Msa0805950 AT4G01070.2 28.704 324 177 9 13 308 8 305 3.79e-26 109
Msa0805950 AT5G54060.1 25.506 494 305 17 1 458 1 467 7.59e-26 110
Msa0805950 AT1G06000.1 29.924 264 156 9 205 450 178 430 3.68e-24 104
Msa0805950 AT4G09500.1 30.918 207 131 4 255 455 210 410 3.47e-21 95.9
Msa0805950 AT2G23210.1 26.523 279 183 10 10 277 7 274 3.69e-20 90.9
Msa0805950 AT2G15490.2 25.543 184 112 4 9 168 3 185 1.42e-12 68.2

Find 101 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACTTAAAATGTTAGAATT+TGG 0.135488 5_3:+23092789 Msa0805950:three_prime_UTR
TTAATGCAATCTTCACTTAA+TGG 0.155045 5_3:-23092021 None:intergenic
GCTAAACAACATGGGATTTA+TGG 0.227646 5_3:+23091527 Msa0805950:CDS
ATCAAATCTTTGTACCCTTT+TGG 0.258174 5_3:-23092201 None:intergenic
AAGGGTATGGAGCAAATTTA+TGG 0.263548 5_3:+23091995 Msa0805950:CDS
TAAGTGAAGATTGCATTAAT+TGG 0.270840 5_3:+23092025 Msa0805950:CDS
TGAAAGTTACCCTGCTTATA+TGG 0.273177 5_3:+23091703 Msa0805950:CDS
AAAGTGAAGTGAATTTCTTA+TGG 0.295838 5_3:+23092148 Msa0805950:CDS
GAATTGCCTTTGATTGTTCC+TGG 0.298353 5_3:+23091632 Msa0805950:CDS
GTTCCTTCTGCTTACTTAGA+TGG 0.303927 5_3:+23091955 Msa0805950:CDS
GTGTAACCAACTAGAATTAT+TGG 0.322221 5_3:+23092251 Msa0805950:CDS
AATACATTTGAAGCTTTAGA+AGG 0.325832 5_3:+23091779 Msa0805950:CDS
GAACATTGTTGTTGTAGTTT+TGG 0.330597 5_3:-23091172 None:intergenic
GAGAAAGAGTTCAACATTGT+TGG 0.342656 5_3:-23091384 None:intergenic
ATATAAGCAGGGTAACTTTC+AGG 0.345186 5_3:-23091701 None:intergenic
CAAATTTAAATCAAGCTGAT+TGG 0.345604 5_3:+23091747 Msa0805950:CDS
CAAATAGAAGAGTTGGCTTT+GGG 0.353033 5_3:+23092117 Msa0805950:CDS
ACGAAATACACTATTATTCA+TGG 0.354704 5_3:-23092672 None:intergenic
AATGAGGTTTGAGAGTGTTT+TGG 0.357948 5_3:-23091429 None:intergenic
ATGTGTCCTTGTGCTGGGTA+TGG 0.359401 5_3:-23091209 None:intergenic
AAGTGAAGTGAATTTCTTAT+GGG 0.361840 5_3:+23092149 Msa0805950:CDS
GATAGATTTAACAGTGTAAT+GGG 0.366981 5_3:-23091297 None:intergenic
TCAGTTGTGTATATCTCCTT+TGG 0.374088 5_3:+23092069 Msa0805950:CDS
AAAGAAGTGAAGTGATTAGA+AGG 0.376196 5_3:+23092502 Msa0805950:CDS
GGACTAATGTGTCCTTGTGC+TGG 0.381138 5_3:-23091215 None:intergenic
TCTGATGGGTTCGACGAATC+CGG 0.389070 5_3:+23091350 Msa0805950:CDS
TTAGAGGAAATTTGGGAAGT+TGG 0.394349 5_3:+23092399 Msa0805950:CDS
TAAGAATATTAATGACTTTG+TGG 0.399789 5_3:+23092584 Msa0805950:CDS
ACAAATAGAAGAGTTGGCTT+TGG 0.406858 5_3:+23092116 Msa0805950:CDS
CAAAGATTTGATCAAAGAAA+AGG 0.407300 5_3:+23092212 Msa0805950:CDS
TGTTGTGTGTTTGCCACAAT+GGG 0.407560 5_3:+23092350 Msa0805950:CDS
ATCAAAGGCAATTCATCAAC+AGG 0.413405 5_3:-23091623 None:intergenic
CTGTTGTGTGTTTGCCACAA+TGG 0.421063 5_3:+23092349 Msa0805950:CDS
TCAAAACGATTAGTTTCAAA+AGG 0.423653 5_3:+23091251 Msa0805950:CDS
TGTGTCCTTGTGCTGGGTAT+GGG 0.433513 5_3:-23091208 None:intergenic
GTATATCTCCTTTGGAAGCA+TGG 0.437333 5_3:+23092077 Msa0805950:CDS
AGGCCAAAAGAGGATGAAAA+TGG 0.445376 5_3:+23092426 Msa0805950:CDS
GAGCAAGGAAAATTACCAAA+AGG 0.446513 5_3:+23092186 Msa0805950:CDS
CTCAATTCATTCAAAACCAA+TGG 0.448142 5_3:+23091404 Msa0805950:CDS
TGATAGATTTAACAGTGTAA+TGG 0.454402 5_3:-23091298 None:intergenic
ATTGGTTCGACAGAGATGTT+TGG 0.459900 5_3:-23091326 None:intergenic
AGAATTTGTGTTGAGTTTGA+AGG 0.460934 5_3:+23092464 Msa0805950:CDS
TTTGACTAACACAAATAAGA+TGG 0.461412 5_3:+23092611 Msa0805950:CDS
TTTGTATTATAGGTTGTGAA+AGG 0.464730 5_3:+23091892 Msa0805950:intron
GACTAATGTGTCCTTGTGCT+GGG 0.469831 5_3:-23091214 None:intergenic
CATTGTGGCAAACACACAAC+AGG 0.471881 5_3:-23092348 None:intergenic
TGCGAAATTGATTGGTCCAA+TGG 0.472345 5_3:+23091933 Msa0805950:CDS
TCAGGAAATCTTATAAAACT+TGG 0.478491 5_3:-23091683 None:intergenic
AACTTCATAGCCATATAAGC+AGG 0.478952 5_3:-23091713 None:intergenic
TCGTCGAACCCATCAGAGAT+TGG 0.480355 5_3:-23091344 None:intergenic
ATGTTTCCTGCGAAATTGAT+TGG 0.483081 5_3:+23091925 Msa0805950:CDS
CATTCACTAACATGATTCAA+AGG 0.483266 5_3:-23092721 None:intergenic
ATCAGAACAAATAGAAGAGT+TGG 0.487703 5_3:+23092110 Msa0805950:CDS
CTTTGAATCATGTTAGTGAA+TGG 0.488946 5_3:+23092722 Msa0805950:three_prime_UTR
GTGAATGGAAGAAGTTAGCT+AGG 0.491635 5_3:+23092532 Msa0805950:CDS
CATGTGCCAATAATTCTAGT+TGG 0.504138 5_3:-23092257 None:intergenic
TCATAGACAATGCAAGTGAT+TGG 0.505206 5_3:-23091476 None:intergenic
GAATTCAATGGAGGAAGGCC+AGG 0.506627 5_3:-23091650 None:intergenic
AAAGATTTGATCAAAGAAAA+GGG 0.513523 5_3:+23092213 Msa0805950:CDS
ATTCACTAACATGATTCAAA+GGG 0.514248 5_3:-23092720 None:intergenic
ATCAAAGGAGACAAAGGGTA+TGG 0.516111 5_3:+23091982 Msa0805950:CDS
TTGTATTATAGGTTGTGAAA+GGG 0.516931 5_3:+23091893 Msa0805950:intron
TTAGAAGGAATGCTAGTGAA+TGG 0.522513 5_3:+23092517 Msa0805950:CDS
AGCAAGGAAAATTACCAAAA+GGG 0.523996 5_3:+23092187 Msa0805950:CDS
TCTGTCGAACCAATCTCTGA+TGG 0.530114 5_3:+23091335 Msa0805950:CDS
GGAAGATCTCTAGAATTCAA+TGG 0.531119 5_3:-23091662 None:intergenic
GCTAGGGATGCTGTTTCTGA+AGG 0.535276 5_3:+23092549 Msa0805950:CDS
CTTGATGTTGCTAAACAACA+TGG 0.541379 5_3:+23091518 Msa0805950:CDS
ATTGGACCAATCAATTTCGC+AGG 0.547623 5_3:-23091931 None:intergenic
GTTGAGTTTGAAGGTTGTGA+TGG 0.549431 5_3:+23092473 Msa0805950:CDS
TACTTAGATGGAAGAATCAA+AGG 0.552258 5_3:+23091967 Msa0805950:CDS
GGAAGAATCAAAGGAGACAA+AGG 0.555117 5_3:+23091976 Msa0805950:CDS
AAGTAAGCAGAAGGAACCAT+TGG 0.560336 5_3:-23091949 None:intergenic
GAAGAATCAAAGGAGACAAA+GGG 0.563073 5_3:+23091977 Msa0805950:CDS
ATTTGAAGCTTTAGAAGGAG+AGG 0.567915 5_3:+23091784 Msa0805950:CDS
GGAAGGCCAGGAACAATCAA+AGG 0.568333 5_3:-23091638 None:intergenic
CTGTCGAACCAATCTCTGAT+GGG 0.568980 5_3:+23091336 Msa0805950:CDS
AGTTTGAAGGTTGTGATGGA+AGG 0.569295 5_3:+23092477 Msa0805950:CDS
TTGACTAACACAAATAAGAT+GGG 0.572178 5_3:+23092612 Msa0805950:CDS
AGTTGGAGTGAGGCCAAAAG+AGG 0.574075 5_3:+23092416 Msa0805950:CDS
CTTCCATCTAAGTAAGCAGA+AGG 0.580606 5_3:-23091958 None:intergenic
GTAATGGGTTGTTGCAAATG+TGG 0.584893 5_3:-23091282 None:intergenic
ACACTTGAGAGTCTAAGTCT+TGG 0.586395 5_3:+23092321 Msa0805950:CDS
TTATTGGCACATGATGCTGT+TGG 0.590681 5_3:+23092267 Msa0805950:CDS
CTCTAGAATTCAATGGAGGA+AGG 0.603852 5_3:-23091655 None:intergenic
TAAAGAAACCATGCTTCCAA+AGG 0.612065 5_3:-23092085 None:intergenic
AGGGATGCTGTTTCTGAAGG+AGG 0.617628 5_3:+23092552 Msa0805950:CDS
ACTTCATAGCCATATAAGCA+GGG 0.620841 5_3:-23091712 None:intergenic
ATATACACAACTGATTGTGA+TGG 0.621040 5_3:-23092060 None:intergenic
GGCAATTGATCAGCCCATTG+TGG 0.626636 5_3:-23092363 None:intergenic
TGAATGGAAGAAGTTAGCTA+GGG 0.630021 5_3:+23092533 Msa0805950:CDS
TTAGCAACATCAAGTGCCCA+AGG 0.641911 5_3:-23091509 None:intergenic
AAAAGGGTATAATTGTAACA+TGG 0.647818 5_3:+23092229 Msa0805950:CDS
AAATTTGGGAAGTTGGAGTG+AGG 0.649483 5_3:+23092406 Msa0805950:CDS
TTGATGTTGCTAAACAACAT+GGG 0.649754 5_3:+23091519 Msa0805950:CDS
AAGATGGGAAATGATTTGAG+TGG 0.669554 5_3:+23092627 Msa0805950:CDS
GTGATCCCATACCCAGCACA+AGG 0.680626 5_3:+23091203 Msa0805950:CDS
TTCGACAGAGATGTTTGGTG+CGG 0.690908 5_3:-23091321 None:intergenic
AGATCTCTAGAATTCAATGG+AGG 0.691278 5_3:-23091659 None:intergenic
AAACAGAGAGAAAACAAACA+TGG 0.701373 5_3:+23091139 Msa0805950:exon
CAGAGAGAAAACAAACATGG+TGG 0.730153 5_3:+23091142 Msa0805950:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATACAAATTAAACATA+AGG - chr5_3:23092826-23092845 None:intergenic 10.0%
!! AAAAATACAAATTAAACATA+AGG - chr5_3:23092826-23092845 None:intergenic 10.0%
!! AATTGTTAATCATCAATTCA+TGG - chr5_3:23091865-23091884 None:intergenic 20.0%
!! AAAGATTTGATCAAAGAAAA+GGG + chr5_3:23092213-23092232 Msa0805950:CDS 20.0%
!!! AAAGTTTTTAGAGGAAATTT+GGG + chr5_3:23092392-23092411 Msa0805950:CDS 20.0%
!! TAAGAATATTAATGACTTTG+TGG + chr5_3:23092584-23092603 Msa0805950:CDS 20.0%
!! AATTGTTAATCATCAATTCA+TGG - chr5_3:23091865-23091884 None:intergenic 20.0%
!! AAAGATTTGATCAAAGAAAA+GGG + chr5_3:23092213-23092232 Msa0805950:CDS 20.0%
!!! AAAGTTTTTAGAGGAAATTT+GGG + chr5_3:23092392-23092411 Msa0805950:CDS 20.0%
!! TAAGAATATTAATGACTTTG+TGG + chr5_3:23092584-23092603 Msa0805950:CDS 20.0%
!!! TTTTCTTTCTCTGTTTTTGT+GGG - chr5_3:23091121-23091140 None:intergenic 25.0%
!!! TTTTTCTTTCTCTGTTTTTG+TGG - chr5_3:23091122-23091141 None:intergenic 25.0%
!!! AAACTAATCGTTTTGAGAAT+TGG - chr5_3:23091247-23091266 None:intergenic 25.0%
!!! TCAAAACGATTAGTTTCAAA+AGG + chr5_3:23091251-23091270 Msa0805950:CDS 25.0%
! GATAGATTTAACAGTGTAAT+GGG - chr5_3:23091300-23091319 None:intergenic 25.0%
! TGATAGATTTAACAGTGTAA+TGG - chr5_3:23091301-23091320 None:intergenic 25.0%
!!! TTTTTTGGTGTTTTTGAATG+AGG - chr5_3:23091448-23091467 None:intergenic 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG + chr5_3:23091587-23091606 Msa0805950:CDS 25.0%
! TCAGGAAATCTTATAAAACT+TGG - chr5_3:23091686-23091705 None:intergenic 25.0%
! CAAATTTAAATCAAGCTGAT+TGG + chr5_3:23091747-23091766 Msa0805950:CDS 25.0%
!!! AATACATTTGAAGCTTTAGA+AGG + chr5_3:23091779-23091798 Msa0805950:CDS 25.0%
! TTTGTATTATAGGTTGTGAA+AGG + chr5_3:23091892-23091911 Msa0805950:intron 25.0%
! TTGTATTATAGGTTGTGAAA+GGG + chr5_3:23091893-23091912 Msa0805950:intron 25.0%
! TTAATGCAATCTTCACTTAA+TGG - chr5_3:23092024-23092043 None:intergenic 25.0%
! TAAGTGAAGATTGCATTAAT+TGG + chr5_3:23092025-23092044 Msa0805950:CDS 25.0%
! AAAGTGAAGTGAATTTCTTA+TGG + chr5_3:23092148-23092167 Msa0805950:CDS 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG + chr5_3:23092149-23092168 Msa0805950:CDS 25.0%
! CAAAGATTTGATCAAAGAAA+AGG + chr5_3:23092212-23092231 Msa0805950:CDS 25.0%
!! AAAAGGGTATAATTGTAACA+TGG + chr5_3:23092229-23092248 Msa0805950:CDS 25.0%
!!! CAAAGTTTTTAGAGGAAATT+TGG + chr5_3:23092391-23092410 Msa0805950:CDS 25.0%
! TTTGACTAACACAAATAAGA+TGG + chr5_3:23092611-23092630 Msa0805950:CDS 25.0%
! TTGACTAACACAAATAAGAT+GGG + chr5_3:23092612-23092631 Msa0805950:CDS 25.0%
! ACGAAATACACTATTATTCA+TGG - chr5_3:23092675-23092694 None:intergenic 25.0%
! ATTCACTAACATGATTCAAA+GGG - chr5_3:23092723-23092742 None:intergenic 25.0%
!! CCAAATTCTAACATTTTAAG+TGG - chr5_3:23092792-23092811 None:intergenic 25.0%
! CCACTTAAAATGTTAGAATT+TGG + chr5_3:23092789-23092808 Msa0805950:three_prime_UTR 25.0%
!!! TTTTCTTTCTCTGTTTTTGT+GGG - chr5_3:23091121-23091140 None:intergenic 25.0%
!!! TTTTTCTTTCTCTGTTTTTG+TGG - chr5_3:23091122-23091141 None:intergenic 25.0%
!!! AAACTAATCGTTTTGAGAAT+TGG - chr5_3:23091247-23091266 None:intergenic 25.0%
!!! TCAAAACGATTAGTTTCAAA+AGG + chr5_3:23091251-23091270 Msa0805950:CDS 25.0%
! GATAGATTTAACAGTGTAAT+GGG - chr5_3:23091300-23091319 None:intergenic 25.0%
! TGATAGATTTAACAGTGTAA+TGG - chr5_3:23091301-23091320 None:intergenic 25.0%
!!! TTTTTTGGTGTTTTTGAATG+AGG - chr5_3:23091448-23091467 None:intergenic 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG + chr5_3:23091587-23091606 Msa0805950:CDS 25.0%
! TCAGGAAATCTTATAAAACT+TGG - chr5_3:23091686-23091705 None:intergenic 25.0%
! CAAATTTAAATCAAGCTGAT+TGG + chr5_3:23091747-23091766 Msa0805950:CDS 25.0%
!!! AATACATTTGAAGCTTTAGA+AGG + chr5_3:23091779-23091798 Msa0805950:CDS 25.0%
! TTTGTATTATAGGTTGTGAA+AGG + chr5_3:23091892-23091911 Msa0805950:intron 25.0%
! TTGTATTATAGGTTGTGAAA+GGG + chr5_3:23091893-23091912 Msa0805950:intron 25.0%
! TTAATGCAATCTTCACTTAA+TGG - chr5_3:23092024-23092043 None:intergenic 25.0%
! TAAGTGAAGATTGCATTAAT+TGG + chr5_3:23092025-23092044 Msa0805950:CDS 25.0%
! AAAGTGAAGTGAATTTCTTA+TGG + chr5_3:23092148-23092167 Msa0805950:CDS 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG + chr5_3:23092149-23092168 Msa0805950:CDS 25.0%
! CAAAGATTTGATCAAAGAAA+AGG + chr5_3:23092212-23092231 Msa0805950:CDS 25.0%
!! AAAAGGGTATAATTGTAACA+TGG + chr5_3:23092229-23092248 Msa0805950:CDS 25.0%
!!! CAAAGTTTTTAGAGGAAATT+TGG + chr5_3:23092391-23092410 Msa0805950:CDS 25.0%
! TTTGACTAACACAAATAAGA+TGG + chr5_3:23092611-23092630 Msa0805950:CDS 25.0%
! TTGACTAACACAAATAAGAT+GGG + chr5_3:23092612-23092631 Msa0805950:CDS 25.0%
! ACGAAATACACTATTATTCA+TGG - chr5_3:23092675-23092694 None:intergenic 25.0%
! ATTCACTAACATGATTCAAA+GGG - chr5_3:23092723-23092742 None:intergenic 25.0%
!! CCAAATTCTAACATTTTAAG+TGG - chr5_3:23092792-23092811 None:intergenic 25.0%
! CCACTTAAAATGTTAGAATT+TGG + chr5_3:23092789-23092808 Msa0805950:three_prime_UTR 25.0%
AAACAGAGAGAAAACAAACA+TGG + chr5_3:23091139-23091158 Msa0805950:exon 30.0%
!! GAACATTGTTGTTGTAGTTT+TGG - chr5_3:23091175-23091194 None:intergenic 30.0%
CTCAATTCATTCAAAACCAA+TGG + chr5_3:23091404-23091423 Msa0805950:CDS 30.0%
!!! TGATTGGTGTTGAAGTTTTT+TGG - chr5_3:23091463-23091482 None:intergenic 30.0%
! TCTATGATTCTTTTCTACCT+TGG + chr5_3:23091492-23091511 Msa0805950:CDS 30.0%
! CTATGATTCTTTTCTACCTT+GGG + chr5_3:23091493-23091512 Msa0805950:CDS 30.0%
TTGATGTTGCTAAACAACAT+GGG + chr5_3:23091519-23091538 Msa0805950:CDS 30.0%
CGGTTAAAATTAGTCATGAA+TGG - chr5_3:23091841-23091860 None:intergenic 30.0%
GTTAATCATCAATTCATGGT+CGG - chr5_3:23091861-23091880 None:intergenic 30.0%
TACTTAGATGGAAGAATCAA+AGG + chr5_3:23091967-23091986 Msa0805950:CDS 30.0%
ATATACACAACTGATTGTGA+TGG - chr5_3:23092063-23092082 None:intergenic 30.0%
ATCAGAACAAATAGAAGAGT+TGG + chr5_3:23092110-23092129 Msa0805950:CDS 30.0%
AGCAAGGAAAATTACCAAAA+GGG + chr5_3:23092187-23092206 Msa0805950:CDS 30.0%
! ATCAAATCTTTGTACCCTTT+TGG - chr5_3:23092204-23092223 None:intergenic 30.0%
GTGTAACCAACTAGAATTAT+TGG + chr5_3:23092251-23092270 Msa0805950:CDS 30.0%
AGAATTTGTGTTGAGTTTGA+AGG + chr5_3:23092464-23092483 Msa0805950:CDS 30.0%
AAAGAAGTGAAGTGATTAGA+AGG + chr5_3:23092502-23092521 Msa0805950:CDS 30.0%
CATTCACTAACATGATTCAA+AGG - chr5_3:23092724-23092743 None:intergenic 30.0%
CTTTGAATCATGTTAGTGAA+TGG + chr5_3:23092722-23092741 Msa0805950:three_prime_UTR 30.0%
AAACAGAGAGAAAACAAACA+TGG + chr5_3:23091139-23091158 Msa0805950:exon 30.0%
!! GAACATTGTTGTTGTAGTTT+TGG - chr5_3:23091175-23091194 None:intergenic 30.0%
CTCAATTCATTCAAAACCAA+TGG + chr5_3:23091404-23091423 Msa0805950:CDS 30.0%
!!! TGATTGGTGTTGAAGTTTTT+TGG - chr5_3:23091463-23091482 None:intergenic 30.0%
! TCTATGATTCTTTTCTACCT+TGG + chr5_3:23091492-23091511 Msa0805950:CDS 30.0%
! CTATGATTCTTTTCTACCTT+GGG + chr5_3:23091493-23091512 Msa0805950:CDS 30.0%
TTGATGTTGCTAAACAACAT+GGG + chr5_3:23091519-23091538 Msa0805950:CDS 30.0%
CGGTTAAAATTAGTCATGAA+TGG - chr5_3:23091841-23091860 None:intergenic 30.0%
GTTAATCATCAATTCATGGT+CGG - chr5_3:23091861-23091880 None:intergenic 30.0%
TACTTAGATGGAAGAATCAA+AGG + chr5_3:23091967-23091986 Msa0805950:CDS 30.0%
ATATACACAACTGATTGTGA+TGG - chr5_3:23092063-23092082 None:intergenic 30.0%
ATCAGAACAAATAGAAGAGT+TGG + chr5_3:23092110-23092129 Msa0805950:CDS 30.0%
AGCAAGGAAAATTACCAAAA+GGG + chr5_3:23092187-23092206 Msa0805950:CDS 30.0%
! ATCAAATCTTTGTACCCTTT+TGG - chr5_3:23092204-23092223 None:intergenic 30.0%
GTGTAACCAACTAGAATTAT+TGG + chr5_3:23092251-23092270 Msa0805950:CDS 30.0%
AGAATTTGTGTTGAGTTTGA+AGG + chr5_3:23092464-23092483 Msa0805950:CDS 30.0%
AAAGAAGTGAAGTGATTAGA+AGG + chr5_3:23092502-23092521 Msa0805950:CDS 30.0%
CATTCACTAACATGATTCAA+AGG - chr5_3:23092724-23092743 None:intergenic 30.0%
CTTTGAATCATGTTAGTGAA+TGG + chr5_3:23092722-23092741 Msa0805950:three_prime_UTR 30.0%
! TTGTGGGTTTACTCTTTTGT+AGG - chr5_3:23091105-23091124 None:intergenic 35.0%
!!! CGTTTTGAGAATTGGATTAG+TGG - chr5_3:23091239-23091258 None:intergenic 35.0%
!! ATTGTTGGCTTGTGAAAAAC+CGG - chr5_3:23091372-23091391 None:intergenic 35.0%
GAGAAAGAGTTCAACATTGT+TGG - chr5_3:23091387-23091406 None:intergenic 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG - chr5_3:23091432-23091451 None:intergenic 35.0%
TCATAGACAATGCAAGTGAT+TGG - chr5_3:23091479-23091498 None:intergenic 35.0%
CTTGATGTTGCTAAACAACA+TGG + chr5_3:23091518-23091537 Msa0805950:CDS 35.0%
GCTAAACAACATGGGATTTA+TGG + chr5_3:23091527-23091546 Msa0805950:CDS 35.0%
ATCAAAGGCAATTCATCAAC+AGG - chr5_3:23091626-23091645 None:intergenic 35.0%
!! AGATCTCTAGAATTCAATGG+AGG - chr5_3:23091662-23091681 None:intergenic 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG - chr5_3:23091665-23091684 None:intergenic 35.0%
ATATAAGCAGGGTAACTTTC+AGG - chr5_3:23091704-23091723 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG + chr5_3:23091703-23091722 Msa0805950:CDS 35.0%
ACTTCATAGCCATATAAGCA+GGG - chr5_3:23091715-23091734 None:intergenic 35.0%
AACTTCATAGCCATATAAGC+AGG - chr5_3:23091716-23091735 None:intergenic 35.0%
!! ATTTGAAGCTTTAGAAGGAG+AGG + chr5_3:23091784-23091803 Msa0805950:CDS 35.0%
ATGTTTCCTGCGAAATTGAT+TGG + chr5_3:23091925-23091944 Msa0805950:CDS 35.0%
GAAGAATCAAAGGAGACAAA+GGG + chr5_3:23091977-23091996 Msa0805950:CDS 35.0%
! AAGGGTATGGAGCAAATTTA+TGG + chr5_3:23091995-23092014 Msa0805950:CDS 35.0%
TCAGTTGTGTATATCTCCTT+TGG + chr5_3:23092069-23092088 Msa0805950:CDS 35.0%
TAAAGAAACCATGCTTCCAA+AGG - chr5_3:23092088-23092107 None:intergenic 35.0%
! ACAAATAGAAGAGTTGGCTT+TGG + chr5_3:23092116-23092135 Msa0805950:CDS 35.0%
!! CAAATAGAAGAGTTGGCTTT+GGG + chr5_3:23092117-23092136 Msa0805950:CDS 35.0%
GAGCAAGGAAAATTACCAAA+AGG + chr5_3:23092186-23092205 Msa0805950:CDS 35.0%
CATGTGCCAATAATTCTAGT+TGG - chr5_3:23092260-23092279 None:intergenic 35.0%
! TCCTCTAAAAACTTTGCATC+TGG - chr5_3:23092387-23092406 None:intergenic 35.0%
TTAGAGGAAATTTGGGAAGT+TGG + chr5_3:23092399-23092418 Msa0805950:CDS 35.0%
! ACACCATTTTCATCCTCTTT+TGG - chr5_3:23092432-23092451 None:intergenic 35.0%
TTAGAAGGAATGCTAGTGAA+TGG + chr5_3:23092517-23092536 Msa0805950:CDS 35.0%
TGAATGGAAGAAGTTAGCTA+GGG + chr5_3:23092533-23092552 Msa0805950:CDS 35.0%
AAGATGGGAAATGATTTGAG+TGG + chr5_3:23092627-23092646 Msa0805950:CDS 35.0%
! TTGTGGGTTTACTCTTTTGT+AGG - chr5_3:23091105-23091124 None:intergenic 35.0%
!!! CGTTTTGAGAATTGGATTAG+TGG - chr5_3:23091239-23091258 None:intergenic 35.0%
!! ATTGTTGGCTTGTGAAAAAC+CGG - chr5_3:23091372-23091391 None:intergenic 35.0%
GAGAAAGAGTTCAACATTGT+TGG - chr5_3:23091387-23091406 None:intergenic 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG - chr5_3:23091432-23091451 None:intergenic 35.0%
TCATAGACAATGCAAGTGAT+TGG - chr5_3:23091479-23091498 None:intergenic 35.0%
CTTGATGTTGCTAAACAACA+TGG + chr5_3:23091518-23091537 Msa0805950:CDS 35.0%
GCTAAACAACATGGGATTTA+TGG + chr5_3:23091527-23091546 Msa0805950:CDS 35.0%
ATCAAAGGCAATTCATCAAC+AGG - chr5_3:23091626-23091645 None:intergenic 35.0%
!! AGATCTCTAGAATTCAATGG+AGG - chr5_3:23091662-23091681 None:intergenic 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG - chr5_3:23091665-23091684 None:intergenic 35.0%
ATATAAGCAGGGTAACTTTC+AGG - chr5_3:23091704-23091723 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG + chr5_3:23091703-23091722 Msa0805950:CDS 35.0%
ACTTCATAGCCATATAAGCA+GGG - chr5_3:23091715-23091734 None:intergenic 35.0%
AACTTCATAGCCATATAAGC+AGG - chr5_3:23091716-23091735 None:intergenic 35.0%
!! ATTTGAAGCTTTAGAAGGAG+AGG + chr5_3:23091784-23091803 Msa0805950:CDS 35.0%
ATGTTTCCTGCGAAATTGAT+TGG + chr5_3:23091925-23091944 Msa0805950:CDS 35.0%
GAAGAATCAAAGGAGACAAA+GGG + chr5_3:23091977-23091996 Msa0805950:CDS 35.0%
! AAGGGTATGGAGCAAATTTA+TGG + chr5_3:23091995-23092014 Msa0805950:CDS 35.0%
TCAGTTGTGTATATCTCCTT+TGG + chr5_3:23092069-23092088 Msa0805950:CDS 35.0%
TAAAGAAACCATGCTTCCAA+AGG - chr5_3:23092088-23092107 None:intergenic 35.0%
! ACAAATAGAAGAGTTGGCTT+TGG + chr5_3:23092116-23092135 Msa0805950:CDS 35.0%
!! CAAATAGAAGAGTTGGCTTT+GGG + chr5_3:23092117-23092136 Msa0805950:CDS 35.0%
GAGCAAGGAAAATTACCAAA+AGG + chr5_3:23092186-23092205 Msa0805950:CDS 35.0%
CATGTGCCAATAATTCTAGT+TGG - chr5_3:23092260-23092279 None:intergenic 35.0%
! TCCTCTAAAAACTTTGCATC+TGG - chr5_3:23092387-23092406 None:intergenic 35.0%
TTAGAGGAAATTTGGGAAGT+TGG + chr5_3:23092399-23092418 Msa0805950:CDS 35.0%
! ACACCATTTTCATCCTCTTT+TGG - chr5_3:23092432-23092451 None:intergenic 35.0%
TTAGAAGGAATGCTAGTGAA+TGG + chr5_3:23092517-23092536 Msa0805950:CDS 35.0%
TGAATGGAAGAAGTTAGCTA+GGG + chr5_3:23092533-23092552 Msa0805950:CDS 35.0%
AAGATGGGAAATGATTTGAG+TGG + chr5_3:23092627-23092646 Msa0805950:CDS 35.0%
CAGAGAGAAAACAAACATGG+TGG + chr5_3:23091142-23091161 Msa0805950:exon 40.0%
!! GTAATGGGTTGTTGCAAATG+TGG - chr5_3:23091285-23091304 None:intergenic 40.0%
!! ATTGGTTCGACAGAGATGTT+TGG - chr5_3:23091329-23091348 None:intergenic 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG - chr5_3:23091423-23091442 None:intergenic 40.0%
GAATTGCCTTTGATTGTTCC+TGG + chr5_3:23091632-23091651 Msa0805950:CDS 40.0%
!! CTCTAGAATTCAATGGAGGA+AGG - chr5_3:23091658-23091677 None:intergenic 40.0%
ATTGGACCAATCAATTTCGC+AGG - chr5_3:23091934-23091953 None:intergenic 40.0%
! TGCGAAATTGATTGGTCCAA+TGG + chr5_3:23091933-23091952 Msa0805950:CDS 40.0%
AAGTAAGCAGAAGGAACCAT+TGG - chr5_3:23091952-23091971 None:intergenic 40.0%
GTTCCTTCTGCTTACTTAGA+TGG + chr5_3:23091955-23091974 Msa0805950:CDS 40.0%
CTTCCATCTAAGTAAGCAGA+AGG - chr5_3:23091961-23091980 None:intergenic 40.0%
GGAAGAATCAAAGGAGACAA+AGG + chr5_3:23091976-23091995 Msa0805950:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG + chr5_3:23091982-23092001 Msa0805950:CDS 40.0%
! GTATATCTCCTTTGGAAGCA+TGG + chr5_3:23092077-23092096 Msa0805950:CDS 40.0%
!!! GTTTTAAGAGAGTCAGAGCA+AGG + chr5_3:23092171-23092190 Msa0805950:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG + chr5_3:23092267-23092286 Msa0805950:CDS 40.0%
! GGATGTTTTGTGACACATTG+TGG + chr5_3:23092288-23092307 Msa0805950:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG + chr5_3:23092292-23092311 Msa0805950:CDS 40.0%
ACACTTGAGAGTCTAAGTCT+TGG + chr5_3:23092321-23092340 Msa0805950:CDS 40.0%
TGTTGTGTGTTTGCCACAAT+GGG + chr5_3:23092350-23092369 Msa0805950:CDS 40.0%
!! GCCAGATGCAAAGTTTTTAG+AGG + chr5_3:23092383-23092402 Msa0805950:CDS 40.0%
AAATTTGGGAAGTTGGAGTG+AGG + chr5_3:23092406-23092425 Msa0805950:CDS 40.0%
AGGCCAAAAGAGGATGAAAA+TGG + chr5_3:23092426-23092445 Msa0805950:CDS 40.0%
GTTGAGTTTGAAGGTTGTGA+TGG + chr5_3:23092473-23092492 Msa0805950:CDS 40.0%
! AGTTTGAAGGTTGTGATGGA+AGG + chr5_3:23092477-23092496 Msa0805950:CDS 40.0%
GTGAATGGAAGAAGTTAGCT+AGG + chr5_3:23092532-23092551 Msa0805950:CDS 40.0%
CAGAGAGAAAACAAACATGG+TGG + chr5_3:23091142-23091161 Msa0805950:exon 40.0%
!! GTAATGGGTTGTTGCAAATG+TGG - chr5_3:23091285-23091304 None:intergenic 40.0%
!! ATTGGTTCGACAGAGATGTT+TGG - chr5_3:23091329-23091348 None:intergenic 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG - chr5_3:23091423-23091442 None:intergenic 40.0%
GAATTGCCTTTGATTGTTCC+TGG + chr5_3:23091632-23091651 Msa0805950:CDS 40.0%
!! CTCTAGAATTCAATGGAGGA+AGG - chr5_3:23091658-23091677 None:intergenic 40.0%
ATTGGACCAATCAATTTCGC+AGG - chr5_3:23091934-23091953 None:intergenic 40.0%
! TGCGAAATTGATTGGTCCAA+TGG + chr5_3:23091933-23091952 Msa0805950:CDS 40.0%
AAGTAAGCAGAAGGAACCAT+TGG - chr5_3:23091952-23091971 None:intergenic 40.0%
GTTCCTTCTGCTTACTTAGA+TGG + chr5_3:23091955-23091974 Msa0805950:CDS 40.0%
CTTCCATCTAAGTAAGCAGA+AGG - chr5_3:23091961-23091980 None:intergenic 40.0%
GGAAGAATCAAAGGAGACAA+AGG + chr5_3:23091976-23091995 Msa0805950:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG + chr5_3:23091982-23092001 Msa0805950:CDS 40.0%
! GTATATCTCCTTTGGAAGCA+TGG + chr5_3:23092077-23092096 Msa0805950:CDS 40.0%
!!! GTTTTAAGAGAGTCAGAGCA+AGG + chr5_3:23092171-23092190 Msa0805950:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG + chr5_3:23092267-23092286 Msa0805950:CDS 40.0%
! GGATGTTTTGTGACACATTG+TGG + chr5_3:23092288-23092307 Msa0805950:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG + chr5_3:23092292-23092311 Msa0805950:CDS 40.0%
ACACTTGAGAGTCTAAGTCT+TGG + chr5_3:23092321-23092340 Msa0805950:CDS 40.0%
TGTTGTGTGTTTGCCACAAT+GGG + chr5_3:23092350-23092369 Msa0805950:CDS 40.0%
!! GCCAGATGCAAAGTTTTTAG+AGG + chr5_3:23092383-23092402 Msa0805950:CDS 40.0%
AAATTTGGGAAGTTGGAGTG+AGG + chr5_3:23092406-23092425 Msa0805950:CDS 40.0%
AGGCCAAAAGAGGATGAAAA+TGG + chr5_3:23092426-23092445 Msa0805950:CDS 40.0%
GTTGAGTTTGAAGGTTGTGA+TGG + chr5_3:23092473-23092492 Msa0805950:CDS 40.0%
! AGTTTGAAGGTTGTGATGGA+AGG + chr5_3:23092477-23092496 Msa0805950:CDS 40.0%
GTGAATGGAAGAAGTTAGCT+AGG + chr5_3:23092532-23092551 Msa0805950:CDS 40.0%
GACTAATGTGTCCTTGTGCT+GGG - chr5_3:23091217-23091236 None:intergenic 45.0%
! TTCGACAGAGATGTTTGGTG+CGG - chr5_3:23091324-23091343 None:intergenic 45.0%
TCTGTCGAACCAATCTCTGA+TGG + chr5_3:23091335-23091354 Msa0805950:CDS 45.0%
CTGTCGAACCAATCTCTGAT+GGG + chr5_3:23091336-23091355 Msa0805950:CDS 45.0%
TTAGCAACATCAAGTGCCCA+AGG - chr5_3:23091512-23091531 None:intergenic 45.0%
CATTGTGGCAAACACACAAC+AGG - chr5_3:23092351-23092370 None:intergenic 45.0%
CTGTTGTGTGTTTGCCACAA+TGG + chr5_3:23092349-23092368 Msa0805950:CDS 45.0%
GACTAATGTGTCCTTGTGCT+GGG - chr5_3:23091217-23091236 None:intergenic 45.0%
! TTCGACAGAGATGTTTGGTG+CGG - chr5_3:23091324-23091343 None:intergenic 45.0%
TCTGTCGAACCAATCTCTGA+TGG + chr5_3:23091335-23091354 Msa0805950:CDS 45.0%
CTGTCGAACCAATCTCTGAT+GGG + chr5_3:23091336-23091355 Msa0805950:CDS 45.0%
TTAGCAACATCAAGTGCCCA+AGG - chr5_3:23091512-23091531 None:intergenic 45.0%
CATTGTGGCAAACACACAAC+AGG - chr5_3:23092351-23092370 None:intergenic 45.0%
CTGTTGTGTGTTTGCCACAA+TGG + chr5_3:23092349-23092368 Msa0805950:CDS 45.0%
!!! ATTTTTTTTTTTTGTATTAT+AGG + chr5_3:23091882-23091901 Msa0805950:intron 5.0%
!!! ATTTTTTTTTTTTGTATTAT+AGG + chr5_3:23091882-23091901 Msa0805950:intron 5.0%
TGTGTCCTTGTGCTGGGTAT+GGG - chr5_3:23091211-23091230 None:intergenic 50.0%
ATGTGTCCTTGTGCTGGGTA+TGG - chr5_3:23091212-23091231 None:intergenic 50.0%
GGACTAATGTGTCCTTGTGC+TGG - chr5_3:23091218-23091237 None:intergenic 50.0%
TCGTCGAACCCATCAGAGAT+TGG - chr5_3:23091347-23091366 None:intergenic 50.0%
!! TCTGATGGGTTCGACGAATC+CGG + chr5_3:23091350-23091369 Msa0805950:CDS 50.0%
GGAAGGCCAGGAACAATCAA+AGG - chr5_3:23091641-23091660 None:intergenic 50.0%
GAATTCAATGGAGGAAGGCC+AGG - chr5_3:23091653-23091672 None:intergenic 50.0%
GGCAATTGATCAGCCCATTG+TGG - chr5_3:23092366-23092385 None:intergenic 50.0%
AGTTGGAGTGAGGCCAAAAG+AGG + chr5_3:23092416-23092435 Msa0805950:CDS 50.0%
!! GCTAGGGATGCTGTTTCTGA+AGG + chr5_3:23092549-23092568 Msa0805950:CDS 50.0%
!! AGGGATGCTGTTTCTGAAGG+AGG + chr5_3:23092552-23092571 Msa0805950:CDS 50.0%
TGTGTCCTTGTGCTGGGTAT+GGG - chr5_3:23091211-23091230 None:intergenic 50.0%
ATGTGTCCTTGTGCTGGGTA+TGG - chr5_3:23091212-23091231 None:intergenic 50.0%
GGACTAATGTGTCCTTGTGC+TGG - chr5_3:23091218-23091237 None:intergenic 50.0%
TCGTCGAACCCATCAGAGAT+TGG - chr5_3:23091347-23091366 None:intergenic 50.0%
!! TCTGATGGGTTCGACGAATC+CGG + chr5_3:23091350-23091369 Msa0805950:CDS 50.0%
GGAAGGCCAGGAACAATCAA+AGG - chr5_3:23091641-23091660 None:intergenic 50.0%
GAATTCAATGGAGGAAGGCC+AGG - chr5_3:23091653-23091672 None:intergenic 50.0%
GGCAATTGATCAGCCCATTG+TGG - chr5_3:23092366-23092385 None:intergenic 50.0%
AGTTGGAGTGAGGCCAAAAG+AGG + chr5_3:23092416-23092435 Msa0805950:CDS 50.0%
!! GCTAGGGATGCTGTTTCTGA+AGG + chr5_3:23092549-23092568 Msa0805950:CDS 50.0%
!! AGGGATGCTGTTTCTGAAGG+AGG + chr5_3:23092552-23092571 Msa0805950:CDS 50.0%
GTGATCCCATACCCAGCACA+AGG + chr5_3:23091203-23091222 Msa0805950:CDS 55.0%
GTGATCCCATACCCAGCACA+AGG + chr5_3:23091203-23091222 Msa0805950:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 23091091 23092929 23091091 ID=Msa0805950;Name=Msa0805950
chr5_3 mRNA 23091091 23092929 23091091 ID=Msa0805950-mRNA-1;Parent=Msa0805950;Name=Msa0805950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=67|1|1|1|1|1|2|273|466
chr5_3 exon 23091091 23091805 23091091 ID=Msa0805950-mRNA-1:exon:9203;Parent=Msa0805950-mRNA-1
chr5_3 exon 23091904 23092929 23091904 ID=Msa0805950-mRNA-1:exon:9204;Parent=Msa0805950-mRNA-1
chr5_3 five_prime_UTR 23091091 23091157 23091091 ID=Msa0805950-mRNA-1:five_prime_utr;Parent=Msa0805950-mRNA-1
chr5_3 CDS 23091158 23091805 23091158 ID=Msa0805950-mRNA-1:cds;Parent=Msa0805950-mRNA-1
chr5_3 CDS 23091904 23092656 23091904 ID=Msa0805950-mRNA-1:cds;Parent=Msa0805950-mRNA-1
chr5_3 three_prime_UTR 23092657 23092929 23092657 ID=Msa0805950-mRNA-1:three_prime_utr;Parent=Msa0805950-mRNA-1
Gene Sequence

>Msa0805950

ATGGTGGTACAGAGCCAAAACTACAACAACAATGTTCATGTCTTAGTGATCCCATACCCAGCACAAGGACACATTAGTCCACTAATCCAATTCTCAAAACGATTAGTTTCAAAAGGCATAAAAACCACATTTGCAACAACCCATTACACTGTTAAATCTATCACCGCACCAAACATCTCTGTCGAACCAATCTCTGATGGGTTCGACGAATCCGGTTTTTCACAAGCCAACAATGTTGAACTCTTTCTCAATTCATTCAAAACCAATGGTTCCAAAACACTCTCAAACCTCATTCAAAAACACCAAAAAACTTCAACACCAATCACTTGCATTGTCTATGATTCTTTTCTACCTTGGGCACTTGATGTTGCTAAACAACATGGGATTTATGGTGCTGCTTTTTTCACTAATTCTGCTGCTGTTTGTAACATTTTTTGTCGTATACATCATGGTTTGATTAAAACTCCTGTTGATGAATTGCCTTTGATTGTTCCTGGCCTTCCTCCATTGAATTCTAGAGATCTTCCAAGTTTTATAAGATTTCCTGAAAGTTACCCTGCTTATATGGCTATGAAGTTAAATCAATTCTCAAATTTAAATCAAGCTGATTGGATGTTTGTCAATACATTTGAAGCTTTAGAAGGAGAGGTTGTGAAAGGGCTAACTGAGATGTTTCCTGCGAAATTGATTGGTCCAATGGTTCCTTCTGCTTACTTAGATGGAAGAATCAAAGGAGACAAAGGGTATGGAGCAAATTTATGGAAGCCATTAAGTGAAGATTGCATTAATTGGTTAAATGCAAAGCCATCACAATCAGTTGTGTATATCTCCTTTGGAAGCATGGTTTCTTTAACATCAGAACAAATAGAAGAGTTGGCTTTGGGATTAAAAGAAAGTGAAGTGAATTTCTTATGGGTTTTAAGAGAGTCAGAGCAAGGAAAATTACCAAAAGGGTACAAAGATTTGATCAAAGAAAAGGGTATAATTGTAACATGGTGTAACCAACTAGAATTATTGGCACATGATGCTGTTGGATGTTTTGTGACACATTGTGGTTGGAATTCAACACTTGAGAGTCTAAGTCTTGGTGTTCCTGTTGTGTGTTTGCCACAATGGGCTGATCAATTGCCAGATGCAAAGTTTTTAGAGGAAATTTGGGAAGTTGGAGTGAGGCCAAAAGAGGATGAAAATGGTGTTGTGAAGAGAGAAGAATTTGTGTTGAGTTTGAAGGTTGTGATGGAAGGTGAAAGAAGTGAAGTGATTAGAAGGAATGCTAGTGAATGGAAGAAGTTAGCTAGGGATGCTGTTTCTGAAGGAGGTAGCTCTGATAAGAATATTAATGACTTTGTGGATCATTTGACTAACACAAATAAGATGGGAAATGATTTGAGTGGTTATTAG

Protein sequence

>Msa0805950

MVVQSQNYNNNVHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVKSITAPNISVEPISDGFDESGFSQANNVELFLNSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAKQHGIYGAAFFTNSAAVCNIFCRIHHGLIKTPVDELPLIVPGLPPLNSRDLPSFIRFPESYPAYMAMKLNQFSNLNQADWMFVNTFEALEGEVVKGLTEMFPAKLIGPMVPSAYLDGRIKGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRESEQGKLPKGYKDLIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWADQLPDAKFLEEIWEVGVRPKEDENGVVKREEFVLSLKVVMEGERSEVIRRNASEWKKLARDAVSEGGSSDKNINDFVDHLTNTNKMGNDLSGY*