AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0217700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0217700 MtrunA17_Chr2g0319591 90.293 443 14 1 1 414 1 443 0.0 816
Msa0217700 MtrunA17_Chr4g0041821 70.136 442 95 6 1 412 1 435 0.0 632
Msa0217700 MtrunA17_Chr1g0183581 47.619 441 172 5 1 412 12 422 1.53e-149 431
Msa0217700 MtrunA17_Chr2g0329651 52.147 163 77 1 141 303 360 521 1.23e-51 184
Msa0217700 MtrunA17_Chr4g0064141 41.096 146 82 2 156 299 431 574 5.37e-31 125
Msa0217700 MtrunA17_Chr3g0127461 33.040 227 122 3 177 403 340 536 5.70e-30 121
Msa0217700 MtrunA17_Chr1g0146661 30.837 227 127 5 177 403 385 581 3.42e-28 116
Msa0217700 MtrunA17_Chr8g0378291 27.329 161 99 4 155 297 222 382 2.37e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0217700 AT4G27100.2 66.063 442 112 5 1 413 1 433 0.0 585
Msa0217700 AT4G27100.1 65.682 440 113 5 1 411 1 431 0.0 581
Msa0217700 AT5G54780.1 63.805 431 115 5 1 401 1 420 0.0 549
Msa0217700 AT2G20440.1 48.182 440 173 6 1 411 7 420 3.69e-151 435
Msa0217700 AT2G20440.2 48.182 440 173 6 1 411 7 420 3.69e-151 435
Msa0217700 AT4G28550.1 47.955 440 174 5 1 411 7 420 5.11e-150 432
Msa0217700 AT2G20440.4 50.909 330 136 4 82 411 1 304 1.36e-122 358
Msa0217700 AT4G28550.3 48.765 324 116 3 1 295 7 309 3.29e-111 330
Msa0217700 AT4G28550.2 48.615 325 117 3 1 296 7 310 1.09e-110 328
Msa0217700 AT2G20440.3 48.466 326 118 4 1 297 7 311 4.24e-110 328
Msa0217700 AT3G59570.1 37.386 329 155 4 129 410 339 663 6.40e-59 204
Msa0217700 AT2G43490.1 53.801 171 78 1 133 303 339 508 1.58e-55 196
Msa0217700 AT2G43490.7 53.801 171 78 1 133 303 339 508 1.58e-55 196
Msa0217700 AT2G43490.3 53.801 171 78 1 133 303 339 508 1.58e-55 196
Msa0217700 AT2G43490.2 53.801 171 78 1 133 303 339 508 1.58e-55 196
Msa0217700 AT2G43490.4 53.801 171 78 1 133 303 339 508 1.72e-55 195
Msa0217700 AT2G43490.6 53.801 171 78 1 133 303 335 504 1.84e-55 195
Msa0217700 AT2G43490.8 53.801 171 78 1 133 303 335 504 1.84e-55 195
Msa0217700 AT2G43490.5 53.801 171 78 1 133 303 339 508 2.35e-55 194
Msa0217700 AT3G59570.2 51.429 175 84 1 129 303 339 512 3.40e-52 186
Msa0217700 AT3G59570.3 51.429 175 84 1 129 303 339 512 5.08e-52 186
Msa0217700 AT5G52580.2 28.346 254 123 4 156 400 456 659 1.99e-29 121
Msa0217700 AT5G52580.3 28.346 254 123 4 156 400 445 648 2.22e-29 120
Msa0217700 AT5G52580.1 28.346 254 123 4 156 400 439 642 2.54e-29 120
Msa0217700 AT5G41940.1 34.802 227 118 7 177 403 345 541 2.70e-29 120
Msa0217700 AT5G53570.1 44.715 123 66 1 177 299 338 458 1.28e-28 118
Msa0217700 AT5G53570.2 44.715 123 66 1 177 299 365 485 1.62e-28 118
Msa0217700 AT5G24390.1 41.463 123 70 1 177 299 317 437 3.13e-27 114
Msa0217700 AT3G49350.1 28.205 234 134 4 177 406 330 533 2.02e-26 111
Msa0217700 AT1G04830.2 29.651 172 98 6 152 304 223 390 3.15e-15 77.8
Msa0217700 AT1G04830.1 29.651 172 98 6 152 304 223 390 3.17e-15 77.8

Find 112 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGTCTGGATTTCTTTC+AGG 0.106976 2_1:+64659733 None:intergenic
AAGAAAACTTGTCAAAATTA+TGG 0.190885 2_1:-64659440 Msa0217700:CDS
ATAAAATACCTATATGTTTA+TGG 0.198183 2_1:+64658720 None:intergenic
TGTTTGGTGCTAGGCTTTCT+TGG 0.220830 2_1:+64656642 None:intergenic
CCTATATGTTTATGGAGTTT+TGG 0.239607 2_1:+64658728 None:intergenic
CGCCAATTGTTTCCTCTTGT+TGG 0.248172 2_1:-64659826 Msa0217700:CDS
CTTCATTATTGTCTCCTATA+AGG 0.248619 2_1:+64656545 None:intergenic
GGAGGCTCAACTAAGTAATT+TGG 0.270154 2_1:-64658774 Msa0217700:CDS
CTGTCAATGTTATACCTTAT+AGG 0.304756 2_1:-64656559 Msa0217700:three_prime_UTR
TGGTTTGCAGAATTGATTAA+AGG 0.313100 2_1:-64656504 Msa0217700:three_prime_UTR
AAACACTAAGTCCAAGAAAA+TGG 0.315609 2_1:-64660531 Msa0217700:CDS
GCATTGTTGTTGAATGTATA+GGG 0.322322 2_1:-64661794 Msa0217700:five_prime_UTR
CATCCAAGCCTCGCGCTTCA+TGG 0.324462 2_1:+64657489 None:intergenic
ATGATGAAGCAGACGCATTT+TGG 0.333770 2_1:-64658995 Msa0217700:CDS
GATGTACTGGTCGCACTCTT+GGG 0.336065 2_1:-64658799 Msa0217700:CDS
AGTTCCCTCAGGGAATTTAA+TGG 0.338293 2_1:+64656467 None:intergenic
TGCATTGTTGTTGAATGTAT+AGG 0.342965 2_1:-64661795 Msa0217700:five_prime_UTR
AGATGTACTGGTCGCACTCT+TGG 0.345747 2_1:-64658800 Msa0217700:CDS
AGGAAATCTAGATGCCAAAA+AGG 0.346102 2_1:-64657154 Msa0217700:CDS
ATGTTAACTCTCCATCAAAT+AGG 0.350184 2_1:-64659616 Msa0217700:intron
TCATACATCAAGAACAAATA+AGG 0.353993 2_1:+64657692 None:intergenic
AGAAAACTTGTCAAAATTAT+GGG 0.382772 2_1:-64659439 Msa0217700:CDS
TACTTCCTCAAGATAATAAT+AGG 0.382978 2_1:-64659702 Msa0217700:CDS
TTTGTGATTCATTGTACCTA+TGG 0.385679 2_1:-64658395 Msa0217700:CDS
AAATTCACAAACCTATTTGA+TGG 0.386030 2_1:+64659605 None:intergenic
TTTACAGAATCTATACTTGA+AGG 0.394310 2_1:+64659679 None:intergenic
GTTCCCTCAGGGAATTTAAT+GGG 0.404583 2_1:+64656468 None:intergenic
GAATTTAATGGGTGGAAACT+TGG 0.405507 2_1:+64656479 None:intergenic
CCAAAACTCCATAAACATAT+AGG 0.406934 2_1:-64658728 Msa0217700:intron
ATAATCATGGGGTCTTGAAT+TGG 0.410294 2_1:+64659757 None:intergenic
GCAACAAGGAAAACAGATAT+AGG 0.410679 2_1:+64657545 None:intergenic
ATTTACTCAAGAAGGGTATC+TGG 0.414638 2_1:-64660500 Msa0217700:CDS
GACCACTCAATGACATGAAA+TGG 0.415891 2_1:+64656303 None:intergenic
CATCTCAAGATTCAAGATCA+AGG 0.418043 2_1:-64661534 Msa0217700:intron
GAGAGACAAAATATGAGAAA+TGG 0.418641 2_1:-64657593 Msa0217700:CDS
ATCATTACTGCAATCTGGTC+TGG 0.419284 2_1:+64661562 None:intergenic
CATCAAGAAGAATTATCATT+GGG 0.422403 2_1:+64659015 None:intergenic
CATTTGAGATGATTAAATGA+TGG 0.423009 2_1:-64656597 Msa0217700:three_prime_UTR
CAAGAAGGGTATCTGGATAT+AGG 0.425363 2_1:-64660493 Msa0217700:CDS
CTTGTGATGTGGAGAGATCC+AGG 0.427729 2_1:-64661611 Msa0217700:exon
ATATTCTTGCAGTTTATGCT+TGG 0.433846 2_1:-64659416 Msa0217700:CDS
CTTGATCTTGAATCTTGAGA+TGG 0.445826 2_1:+64661535 None:intergenic
ACTTGTCAACTCAAAGAGAA+TGG 0.449458 2_1:+64661769 None:intergenic
TCATCAAGAAGAATTATCAT+TGG 0.451073 2_1:+64659014 None:intergenic
GCTTGGATAGATAAAGAAGT+TGG 0.451389 2_1:-64659399 Msa0217700:CDS
TTGTGATTCATTGTACCTAT+GGG 0.454384 2_1:-64658394 Msa0217700:CDS
TTGTTTCCTCTTGTTGGAAG+TGG 0.462346 2_1:-64659820 Msa0217700:CDS
CATCATTTAATCATCTCAAA+TGG 0.467433 2_1:+64656598 None:intergenic
ATTTCTTTCAGGCATAATCA+TGG 0.468298 2_1:+64659744 None:intergenic
AGTACAGCTAATCCCTTGTC+TGG 0.469428 2_1:+64659721 None:intergenic
CGAGGAAATTTCAGATGTAC+TGG 0.471593 2_1:-64658812 Msa0217700:CDS
GGAACATCATTACTGCAATC+TGG 0.472237 2_1:+64661557 None:intergenic
CATGATGCATTTACTCAAGA+AGG 0.472341 2_1:-64660508 Msa0217700:CDS
TTGACGTGGTTCGCACTGAT+AGG 0.478186 2_1:-64659485 Msa0217700:CDS
AAAGAATCAGCTGAAACTCC+TGG 0.480245 2_1:+64661593 None:intergenic
CAATGGATATGTTTGGTGCT+AGG 0.484607 2_1:+64656633 None:intergenic
CAGATATTGAATGACACAAC+AGG 0.486107 2_1:-64657174 Msa0217700:CDS
TGGTCGCACTCTTGGGGTGG+AGG 0.488394 2_1:-64658792 Msa0217700:CDS
GATGGAGAGTTAACATCCAC+TGG 0.490352 2_1:+64659623 None:intergenic
TGGCCATCATCAGTAATTAC+AGG 0.493011 2_1:+64659781 None:intergenic
ACTCCATGAAGCGCGAGGCT+TGG 0.495463 2_1:-64657492 Msa0217700:CDS
TTCCAACAAGAGGAAACAAT+TGG 0.498284 2_1:+64659824 None:intergenic
TTTCTTTCAGGCATAATCAT+GGG 0.498518 2_1:+64659745 None:intergenic
TAGGTACAATGAATCACAAA+AGG 0.507991 2_1:+64658398 None:intergenic
TAACATACAACAGTTCCCTC+AGG 0.510849 2_1:+64656456 None:intergenic
TCTTTCAGTTTCTTGTGATG+TGG 0.511895 2_1:-64661622 Msa0217700:exon
CTTGTCAACTCAAAGAGAAT+GGG 0.517137 2_1:+64661770 None:intergenic
ATTTGAGATGATTAAATGAT+GGG 0.519694 2_1:-64656596 Msa0217700:three_prime_UTR
GTAAAAGCTGAGGGCGTCAA+AGG 0.527510 2_1:-64657650 Msa0217700:CDS
TCACCTGTAATTACTGATGA+TGG 0.529934 2_1:-64659784 Msa0217700:CDS
CACAAACACAAGAAGAAACA+AGG 0.539544 2_1:+64661669 None:intergenic
AGGAAAACAGATATAGGAAG+AGG 0.540547 2_1:+64657551 None:intergenic
GAATTATCATTGGGGAGCAT+AGG 0.542492 2_1:+64659024 None:intergenic
TTGATCTTGAATCTTGAGAT+GGG 0.545349 2_1:+64661536 None:intergenic
GTGTATCCATCCAAAAGAGC+AGG 0.551455 2_1:-64656411 Msa0217700:three_prime_UTR
AGTCAATCAAATTTAGAGTG+TGG 0.558511 2_1:-64656524 Msa0217700:three_prime_UTR
TACTGGTCGCACTCTTGGGG+TGG 0.558646 2_1:-64658795 Msa0217700:CDS
GAAGGCCTATTATTATCTTG+AGG 0.560973 2_1:+64659697 None:intergenic
TGGAGAACAGAACATATTGG+TGG 0.562536 2_1:-64658477 Msa0217700:intron
TCAGGATGCAATATGCTACA+TGG 0.565622 2_1:-64659861 Msa0217700:intron
TCATGGGGTCTTGAATTGGT+TGG 0.566507 2_1:+64659761 None:intergenic
ATTTAATCATCTCAAATGGA+AGG 0.566778 2_1:+64656602 None:intergenic
TTCTTTCAGGCATAATCATG+GGG 0.568000 2_1:+64659746 None:intergenic
ATGTACTGGTCGCACTCTTG+GGG 0.573792 2_1:-64658798 Msa0217700:CDS
AAAGAAGTTGGATACGGTCA+AGG 0.579690 2_1:-64659387 Msa0217700:intron
TGATTCATTGTACCTATGGG+AGG 0.581982 2_1:-64658391 Msa0217700:intron
ATCAGCTTCTGTAAAAGCTG+AGG 0.587749 2_1:-64657660 Msa0217700:CDS
CTTTCAACACACCAGCAACA+AGG 0.588036 2_1:+64657531 None:intergenic
ATCCATTTCATGTCATTGAG+TGG 0.590110 2_1:-64656305 Msa0217700:three_prime_UTR
AATCGACCACTTCCAACAAG+AGG 0.590144 2_1:+64659814 None:intergenic
ATAGATAAAGAAGTTGGATA+CGG 0.592454 2_1:-64659393 Msa0217700:CDS
CCACCCATTAAATTCCCTGA+GGG 0.594717 2_1:-64656471 Msa0217700:three_prime_UTR
AACATACAACAGTTCCCTCA+GGG 0.598715 2_1:+64656457 None:intergenic
AGGCTTGGATGATGTTGTCA+AGG 0.604218 2_1:-64657477 Msa0217700:intron
TCAGCTTCTGTAAAAGCTGA+GGG 0.607394 2_1:-64657659 Msa0217700:CDS
ATGATGCATTTACTCAAGAA+GGG 0.608798 2_1:-64660507 Msa0217700:CDS
GGTTCGCACTGATAGGACAT+TGG 0.613291 2_1:-64659478 Msa0217700:CDS
CCTGAAAGAAATCCAGACAA+GGG 0.614978 2_1:-64659733 Msa0217700:CDS
AGAACAGAACATATTGGTGG+AGG 0.618638 2_1:-64658474 Msa0217700:intron
AAGCCAGACACACCTCCCAT+AGG 0.625296 2_1:+64658379 None:intergenic
GCCTGAAAGAAATCCAGACA+AGG 0.626590 2_1:-64659734 Msa0217700:CDS
CCCTCAGGGAATTTAATGGG+TGG 0.639260 2_1:+64656471 None:intergenic
GTATATGAGCAAATACCCCT+CGG 0.645812 2_1:+64660449 None:intergenic
GCAAAGTCAATACGACAATG+TGG 0.656189 2_1:-64657623 Msa0217700:CDS
CTTTGAGACGAATCTACCGA+GGG 0.661418 2_1:-64660465 Msa0217700:CDS
ATACGTTTCAGGTCTTGACG+TGG 0.662348 2_1:-64659499 Msa0217700:intron
CAGACAAGAAACTAATCCAG+TGG 0.668020 2_1:-64659639 Msa0217700:CDS
ATCAAGAAGAATTATCATTG+GGG 0.677023 2_1:+64659016 None:intergenic
AAATTACTCCATGAAGCGCG+AGG 0.681422 2_1:-64657497 Msa0217700:CDS
TCCACCCATTAAATTCCCTG+AGG 0.686227 2_1:-64656472 Msa0217700:three_prime_UTR
ACTTTGAGACGAATCTACCG+AGG 0.700779 2_1:-64660466 Msa0217700:CDS
TTTGAGACGAATCTACCGAG+GGG 0.798701 2_1:-64660464 Msa0217700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTAATTT+TGG - chr2_1:64657452-64657471 Msa0217700:intron 0.0%
!!! ACTAAAGTTTTTTTTATAAA+TGG - chr2_1:64656858-64656877 Msa0217700:intron 10.0%
!!! TTTTTTTTATTCTAATAAGA+AGG - chr2_1:64658823-64658842 Msa0217700:intron 10.0%
!!! TTTTATTCAACAAATTTTAA+TGG + chr2_1:64659528-64659547 None:intergenic 10.0%
!!! AAAGTTTGATTTTTATTTCT+GGG - chr2_1:64656586-64656605 Msa0217700:three_prime_UTR 15.0%
!!! GTTTTTGTTATAATTTTGTT+TGG - chr2_1:64656608-64656627 Msa0217700:three_prime_UTR 15.0%
!!! TTTTTTTAATTTTGGAAACT+CGG - chr2_1:64657460-64657479 Msa0217700:intron 15.0%
!!! ATAATCATCAATACTTTTAA+GGG + chr2_1:64657751-64657770 None:intergenic 15.0%
!! ATAAAATACCTATATGTTTA+TGG + chr2_1:64659364-64659383 None:intergenic 15.0%
!!! AATTTACTGTCTTTTAATTT+TGG - chr2_1:64659584-64659603 Msa0217700:intron 15.0%
!!! ATTTACATTTTATTGAACAA+TGG - chr2_1:64659750-64659769 Msa0217700:CDS 15.0%
!!! ATATCATAAACTGTTTTAAT+GGG + chr2_1:64660272-64660291 None:intergenic 15.0%
!!! TATATCATAAACTGTTTTAA+TGG + chr2_1:64660273-64660292 None:intergenic 15.0%
!! AATTTAACACATACATAAAA+AGG + chr2_1:64660848-64660867 None:intergenic 15.0%
!! CAGAAATAAAAATCAAACTT+TGG + chr2_1:64656587-64656606 None:intergenic 20.0%
!!! CAAAGTTTGATTTTTATTTC+TGG - chr2_1:64656585-64656604 Msa0217700:three_prime_UTR 20.0%
!!! TTTAAGATAGTGTCTTTTTT+TGG - chr2_1:64657218-64657237 Msa0217700:intron 20.0%
!!! CATAATCATCAATACTTTTA+AGG + chr2_1:64657752-64657771 None:intergenic 20.0%
!!! CTTAAAAGTATTGATGATTA+TGG - chr2_1:64657750-64657769 Msa0217700:intron 20.0%
!!! CAAGAATTTTTATGTTTATG+TGG - chr2_1:64657801-64657820 Msa0217700:intron 20.0%
!! TTGTTAAAAAATTTCAAACC+AGG - chr2_1:64657843-64657862 Msa0217700:intron 20.0%
!! TGTTAAAAAATTTCAAACCA+GGG - chr2_1:64657844-64657863 Msa0217700:intron 20.0%
!! ACATTGAAACAATTATGAAA+TGG + chr2_1:64657983-64658002 None:intergenic 20.0%
!! TTACCATGTGATTTATATTA+CGG + chr2_1:64658541-64658560 None:intergenic 20.0%
!! AAGAAAACTTGTCAAAATTA+TGG - chr2_1:64658641-64658660 Msa0217700:intron 20.0%
!! AGAAAACTTGTCAAAATTAT+GGG - chr2_1:64658642-64658661 Msa0217700:intron 20.0%
!! AATAAACCAAGTAAACAAAT+TGG - chr2_1:64658853-64658872 Msa0217700:intron 20.0%
!! TAAAAGAGATAATAGAGATA+AGG + chr2_1:64659146-64659165 None:intergenic 20.0%
!! TTTCCATTAATAATTTCTTC+AGG + chr2_1:64659484-64659503 None:intergenic 20.0%
!!! TATCATAAACTGTTTTAATG+GGG + chr2_1:64660271-64660290 None:intergenic 20.0%
!!! AAATTTTTAACAGATGATGT+GGG - chr2_1:64660352-64660371 Msa0217700:intron 20.0%
!! TCACAAAAAATATTTGAGAA+AGG - chr2_1:64660972-64660991 Msa0217700:intron 20.0%
!! AAACAAAAAATGTTAACTAG+TGG - chr2_1:64661115-64661134 Msa0217700:intron 20.0%
!! AAAAAATCAATGGATATGTT+TGG + chr2_1:64661458-64661477 None:intergenic 20.0%
!!! ATTTGAGATGATTAAATGAT+GGG - chr2_1:64661485-64661504 Msa0217700:intron 20.0%
!! TAATACAAAAAAGAAAAGAC+AGG - chr2_1:64661745-64661764 Msa0217700:five_prime_UTR 20.0%
!! AGAAACTTTTGTTCATTTTG+AGG - chr2_1:64656928-64656947 Msa0217700:intron 25.0%
!! GAAACTTTTGTTCATTTTGA+GGG - chr2_1:64656929-64656948 Msa0217700:intron 25.0%
!! AAACTTTTGTTCATTTTGAG+GGG - chr2_1:64656930-64656949 Msa0217700:intron 25.0%
! TTAACACACAATGTTATCAA+CGG + chr2_1:64657110-64657129 None:intergenic 25.0%
! TGATAACATTGTGTGTTAAA+TGG - chr2_1:64657111-64657130 Msa0217700:CDS 25.0%
! GATAACATTGTGTGTTAAAT+GGG - chr2_1:64657112-64657131 Msa0217700:CDS 25.0%
!! ATGCAAATGATTTTGTGTTA+AGG + chr2_1:64657376-64657395 None:intergenic 25.0%
!! ACTTCTTGATTGTTATTACA+TGG - chr2_1:64657515-64657534 Msa0217700:CDS 25.0%
! AAATATGATTAAGATCAGAC+AGG + chr2_1:64657717-64657736 None:intergenic 25.0%
!!! CAATGTTTTAAAAACTCAAC+CGG - chr2_1:64657997-64658016 Msa0217700:intron 25.0%
! AGTTCAAGTAATGATCTTAT+AGG + chr2_1:64658180-64658199 None:intergenic 25.0%
!! ACTTTTATGTTTATGTCATC+AGG - chr2_1:64658202-64658221 Msa0217700:intron 25.0%
! TACTTCCTCAAGATAATAAT+AGG - chr2_1:64658379-64658398 Msa0217700:intron 25.0%
! TTTACAGAATCTATACTTGA+AGG + chr2_1:64658405-64658424 None:intergenic 25.0%
! AAATTCACAAACCTATTTGA+TGG + chr2_1:64658479-64658498 None:intergenic 25.0%
! ACGTATTATGTGCATAAAAA+GGG + chr2_1:64658568-64658587 None:intergenic 25.0%
! AACGTATTATGTGCATAAAA+AGG + chr2_1:64658569-64658588 None:intergenic 25.0%
! ATAGATAAAGAAGTTGGATA+CGG - chr2_1:64658688-64658707 Msa0217700:intron 25.0%
! AAAAAAAACTACTACTTGCA+TGG + chr2_1:64658808-64658827 None:intergenic 25.0%
!! TTGTTTCCAATTTGTTTACT+TGG + chr2_1:64658862-64658881 None:intergenic 25.0%
! ATCAAGAAGAATTATCATTG+GGG + chr2_1:64659068-64659087 None:intergenic 25.0%
! CATCAAGAAGAATTATCATT+GGG + chr2_1:64659069-64659088 None:intergenic 25.0%
! TCATCAAGAAGAATTATCAT+TGG + chr2_1:64659070-64659089 None:intergenic 25.0%
! ATGCCTGAAGAAATTATTAA+TGG - chr2_1:64659478-64659497 Msa0217700:CDS 25.0%
! TTTCTTCAACATAACAAAAG+AGG + chr2_1:64659553-64659572 None:intergenic 25.0%
!!! CTTTTGTTATGTTGAAGAAA+TGG - chr2_1:64659553-64659572 Msa0217700:intron 25.0%
! CTAACACTATCTCATTAATT+CGG + chr2_1:64659835-64659854 None:intergenic 25.0%
! GCCATATATATATAGTACTA+CGG - chr2_1:64660014-64660033 Msa0217700:intron 25.0%
! ACCGTAGTACTATATATATA+TGG + chr2_1:64660018-64660037 None:intergenic 25.0%
!!! ATCATAAACTGTTTTAATGG+GGG + chr2_1:64660270-64660289 None:intergenic 25.0%
!! GAAATTTTTAACAGATGATG+TGG - chr2_1:64660351-64660370 Msa0217700:intron 25.0%
! TCATACATCAAGAACAAATA+AGG + chr2_1:64660392-64660411 None:intergenic 25.0%
! AGACTTTGCAATAAATGTAT+TGG + chr2_1:64661075-64661094 None:intergenic 25.0%
! TTTATTGCAAAGTCTTAGAT+TGG - chr2_1:64661080-64661099 Msa0217700:intron 25.0%
! AAAATGTTAACTAGTGGTTA+AGG - chr2_1:64661121-64661140 Msa0217700:intron 25.0%
! AATAGTCATAAGCAATAAGT+TGG + chr2_1:64661249-64661268 None:intergenic 25.0%
! AATAAACTTTAATTGCTTGC+AGG - chr2_1:64661416-64661435 Msa0217700:intron 25.0%
! AATGGAAGGAAAAAAATCAA+TGG + chr2_1:64661468-64661487 None:intergenic 25.0%
! ATTTAATCATCTCAAATGGA+AGG + chr2_1:64661482-64661501 None:intergenic 25.0%
! CATCATTTAATCATCTCAAA+TGG + chr2_1:64661486-64661505 None:intergenic 25.0%
!! CATTTGAGATGATTAAATGA+TGG - chr2_1:64661484-64661503 Msa0217700:intron 25.0%
! TGCATTGTTGTTGAATGTAT+AGG - chr2_1:64656286-64656305 Msa0217700:three_prime_UTR 30.0%
! GCATTGTTGTTGAATGTATA+GGG - chr2_1:64656287-64656306 Msa0217700:three_prime_UTR 30.0%
!! AGTTGACAAGTTTTTGTTTC+TGG - chr2_1:64656324-64656343 Msa0217700:three_prime_UTR 30.0%
!! GTTGACAAGTTTTTGTTTCT+GGG - chr2_1:64656325-64656344 Msa0217700:three_prime_UTR 30.0%
TTGATCTTGAATCTTGAGAT+GGG + chr2_1:64656548-64656567 None:intergenic 30.0%
! TTGGTGATATAAACTGTTGT+TGG - chr2_1:64656627-64656646 Msa0217700:three_prime_UTR 30.0%
TGGTGATATAAACTGTTGTT+GGG - chr2_1:64656628-64656647 Msa0217700:three_prime_UTR 30.0%
TATAAACTGTTGTTGGGTAT+AGG - chr2_1:64656634-64656653 Msa0217700:exon 30.0%
GAAGTGTATTATTGGATTGA+TGG - chr2_1:64656656-64656675 Msa0217700:intron 30.0%
TAGTACATAACAATGAAGCA+CGG + chr2_1:64656799-64656818 None:intergenic 30.0%
! TTTCAGATAGTTGATATGTG+AGG - chr2_1:64656963-64656982 Msa0217700:intron 30.0%
TTGAATGTGATGACAAGTAT+TGG - chr2_1:64656986-64657005 Msa0217700:intron 30.0%
!!! GAATTTTTTGACAATCTCCA+TGG - chr2_1:64657016-64657035 Msa0217700:intron 30.0%
AAACACTAAGTCCAAGAAAA+TGG - chr2_1:64657550-64657569 Msa0217700:CDS 30.0%
ATGATGCATTTACTCAAGAA+GGG - chr2_1:64657574-64657593 Msa0217700:CDS 30.0%
! GAAGTTTGGGAATTTTTACT+TGG - chr2_1:64657889-64657908 Msa0217700:intron 30.0%
! GTCTAGAATTCAGAAATGTT+GGG + chr2_1:64658158-64658177 None:intergenic 30.0%
TTTCTTTCAGGCATAATCAT+GGG + chr2_1:64658339-64658358 None:intergenic 30.0%
ATTTCTTTCAGGCATAATCA+TGG + chr2_1:64658340-64658359 None:intergenic 30.0%
ATGTTAACTCTCCATCAAAT+AGG - chr2_1:64658465-64658484 Msa0217700:CDS 30.0%
TCACCGTAATATAAATCACA+TGG - chr2_1:64658535-64658554 Msa0217700:intron 30.0%
TTATGCACATAATACGTTTC+AGG - chr2_1:64658571-64658590 Msa0217700:intron 30.0%
ATATTCTTGCAGTTTATGCT+TGG - chr2_1:64658665-64658684 Msa0217700:intron 30.0%
!! AGTACTGATCTATTTCAAAG+AGG + chr2_1:64658730-64658749 None:intergenic 30.0%
TCAACGTGAAATATCATAGT+TGG + chr2_1:64658771-64658790 None:intergenic 30.0%
TTCTCGATATATCAATCTAG+TGG + chr2_1:64658900-64658919 None:intergenic 30.0%
AACAATTCACAATTCTGAAC+AGG - chr2_1:64659025-64659044 Msa0217700:CDS 30.0%
AAGTATGTAATTCAAGTGCT+CGG - chr2_1:64659195-64659214 Msa0217700:intron 30.0%
! CCTATATGTTTATGGAGTTT+TGG + chr2_1:64659356-64659375 None:intergenic 30.0%
CCAAAACTCCATAAACATAT+AGG - chr2_1:64659353-64659372 Msa0217700:intron 30.0%
! TCGAATTTTCTAACTCGATT+TGG - chr2_1:64659421-64659440 Msa0217700:CDS 30.0%
! CGAATTTTCTAACTCGATTT+GGG - chr2_1:64659422-64659441 Msa0217700:CDS 30.0%
!! TTTTGGAGAACAGAACATAT+TGG - chr2_1:64659601-64659620 Msa0217700:intron 30.0%
TAGGTACAATGAATCACAAA+AGG + chr2_1:64659686-64659705 None:intergenic 30.0%
TTTGTGATTCATTGTACCTA+TGG - chr2_1:64659686-64659705 Msa0217700:CDS 30.0%
TTGTGATTCATTGTACCTAT+GGG - chr2_1:64659687-64659706 Msa0217700:CDS 30.0%
CATATATAGACACATAAGAG+AGG + chr2_1:64660162-64660181 None:intergenic 30.0%
GTAAAACTATCTGTTGAGTA+TGG + chr2_1:64660187-64660206 None:intergenic 30.0%
GAGAGACAAAATATGAGAAA+TGG - chr2_1:64660488-64660507 Msa0217700:CDS 30.0%
! TGAAATTGATGTTCCCTTTT+TGG - chr2_1:64660704-64660723 Msa0217700:intron 30.0%
!! CATAGCTTGTTAACCAAAAA+GGG + chr2_1:64660720-64660739 None:intergenic 30.0%
!! ACATAGCTTGTTAACCAAAA+AGG + chr2_1:64660721-64660740 None:intergenic 30.0%
! AAGCAATAAGTTGGCAAAAA+TGG + chr2_1:64661240-64661259 None:intergenic 30.0%
! AAGTTTTACATCGTACCATA+TGG + chr2_1:64661368-64661387 None:intergenic 30.0%
CTGTCAATGTTATACCTTAT+AGG - chr2_1:64661522-64661541 Msa0217700:intron 30.0%
CTTCATTATTGTCTCCTATA+AGG + chr2_1:64661539-64661558 None:intergenic 30.0%
! AGTCAATCAAATTTAGAGTG+TGG - chr2_1:64661557-64661576 Msa0217700:CDS 30.0%
! TGGTTTGCAGAATTGATTAA+AGG - chr2_1:64661577-64661596 Msa0217700:CDS 30.0%
! ACAATTTTTACCTGCTCTTT+TGG + chr2_1:64661683-64661702 None:intergenic 30.0%
CTTGTCAACTCAAAGAGAAT+GGG + chr2_1:64656314-64656333 None:intergenic 35.0%
ACTTGTCAACTCAAAGAGAA+TGG + chr2_1:64656315-64656334 None:intergenic 35.0%
CACAAACACAAGAAGAAACA+AGG + chr2_1:64656415-64656434 None:intergenic 35.0%
TCTTTCAGTTTCTTGTGATG+TGG - chr2_1:64656459-64656478 Msa0217700:three_prime_UTR 35.0%
CTTGATCTTGAATCTTGAGA+TGG + chr2_1:64656549-64656568 None:intergenic 35.0%
CATCTCAAGATTCAAGATCA+AGG - chr2_1:64656547-64656566 Msa0217700:three_prime_UTR 35.0%
! GGGTATAGGAAGTGTATTAT+TGG - chr2_1:64656648-64656667 Msa0217700:intron 35.0%
!! GAGCTTGTTAAGTTGATAAC+AGG - chr2_1:64656904-64656923 Msa0217700:intron 35.0%
GATTGTCAAAAAATTCGCCA+TGG + chr2_1:64657012-64657031 None:intergenic 35.0%
! GTATCCATCATGGTGTTTTA+TGG - chr2_1:64657059-64657078 Msa0217700:intron 35.0%
!! ATTGTGTGTTAAATGGGTTG+TGG - chr2_1:64657118-64657137 Msa0217700:CDS 35.0%
CTTTGCTAAGTTGTCAGTAA+TGG - chr2_1:64657143-64657162 Msa0217700:CDS 35.0%
!!! GTTGTCAGTAATGGTTTTGT+TGG - chr2_1:64657152-64657171 Msa0217700:CDS 35.0%
CTAGACTTTCAATCTCACAA+TGG - chr2_1:64657419-64657438 Msa0217700:intron 35.0%
! TGATTGTTATTACATGGCTC+AGG - chr2_1:64657521-64657540 Msa0217700:CDS 35.0%
!!! AATGCATCATGCCATTTTCT+TGG + chr2_1:64657564-64657583 None:intergenic 35.0%
CATGATGCATTTACTCAAGA+AGG - chr2_1:64657573-64657592 Msa0217700:CDS 35.0%
!! ATTTACTCAAGAAGGGTATC+TGG - chr2_1:64657581-64657600 Msa0217700:CDS 35.0%
ATATCTGAATCCTAGCTTGA+TGG - chr2_1:64657687-64657706 Msa0217700:CDS 35.0%
ATCAATTAGGGGAGAAGTTT+GGG - chr2_1:64657876-64657895 Msa0217700:intron 35.0%
TTTCGTCAAATGTACTCTTC+GGG + chr2_1:64657924-64657943 None:intergenic 35.0%
CTTTCGTCAAATGTACTCTT+CGG + chr2_1:64657925-64657944 None:intergenic 35.0%
CAACTATTCGGTTATTTGAG+TGG + chr2_1:64658090-64658109 None:intergenic 35.0%
GTTTAACTGGTTGAACTGTA+TGG - chr2_1:64658126-64658145 Msa0217700:intron 35.0%
! GGTCTAGAATTCAGAAATGT+TGG + chr2_1:64658159-64658178 None:intergenic 35.0%
TTCCAACAAGAGGAAACAAT+TGG + chr2_1:64658260-64658279 None:intergenic 35.0%
TCACCTGTAATTACTGATGA+TGG - chr2_1:64658297-64658316 Msa0217700:intron 35.0%
ATAATCATGGGGTCTTGAAT+TGG + chr2_1:64658327-64658346 None:intergenic 35.0%
TTCTTTCAGGCATAATCATG+GGG + chr2_1:64658338-64658357 None:intergenic 35.0%
GAAGGCCTATTATTATCTTG+AGG + chr2_1:64658387-64658406 None:intergenic 35.0%
! CTTGTGCACTATTTTGTAGT+AGG - chr2_1:64658501-64658520 Msa0217700:intron 35.0%
GCTTGGATAGATAAAGAAGT+TGG - chr2_1:64658682-64658701 Msa0217700:intron 35.0%
TTGCAAGGTTGCAAGAAAAA+TGG + chr2_1:64658951-64658970 None:intergenic 35.0%
TGCAACCTTGCAACAAATAA+TGG - chr2_1:64658958-64658977 Msa0217700:intron 35.0%
! ACTTGCCATTATTTGTTGCA+AGG + chr2_1:64658966-64658985 None:intergenic 35.0%
TAGCTTAGAGACATTGCAAA+TGG + chr2_1:64658997-64659016 None:intergenic 35.0%
!!! ATTTTCTAACTCGATTTGGG+TGG - chr2_1:64659425-64659444 Msa0217700:CDS 35.0%
!! GCGACTATGTATTTGCTTTT+CGG - chr2_1:64659629-64659648 Msa0217700:CDS 35.0%
!! ATTTGCTTTTCGGATGCTTA+TGG - chr2_1:64659639-64659658 Msa0217700:CDS 35.0%
AGAACGCAAATTGCAAACAA+TGG - chr2_1:64659883-64659902 Msa0217700:intron 35.0%
AGGAAAACAGATATAGGAAG+AGG + chr2_1:64660533-64660552 None:intergenic 35.0%
GCAACAAGGAAAACAGATAT+AGG + chr2_1:64660539-64660558 None:intergenic 35.0%
! ATATCTGTTTTCCTTGTTGC+TGG - chr2_1:64660539-64660558 Msa0217700:CDS 35.0%
! ATGTTGTCAAGGTTAGTCAT+GGG - chr2_1:64660615-64660634 Msa0217700:intron 35.0%
CAGATATTGAATGACACAAC+AGG - chr2_1:64660907-64660926 Msa0217700:intron 35.0%
AGGAAATCTAGATGCCAAAA+AGG - chr2_1:64660927-64660946 Msa0217700:intron 35.0%
GAGAATACGAAGATTGTACA+AGG + chr2_1:64661020-64661039 None:intergenic 35.0%
CGAAATACAGATCTATGTGA+CGG + chr2_1:64661177-64661196 None:intergenic 35.0%
AAGTTGGCAAAAATGGCATA+TGG + chr2_1:64661233-64661252 None:intergenic 35.0%
TTTCTCAGTAGTTAGCCATA+TGG - chr2_1:64661350-64661369 Msa0217700:intron 35.0%
! GAATTTAATGGGTGGAAACT+TGG + chr2_1:64661605-64661624 None:intergenic 35.0%
! TTTTTACCTGCTCTTTTGGA+TGG + chr2_1:64661679-64661698 None:intergenic 35.0%
ATCCATTTCATGTCATTGAG+TGG - chr2_1:64661776-64661795 Msa0217700:five_prime_UTR 35.0%
AAAGAATCAGCTGAAACTCC+TGG + chr2_1:64656491-64656510 None:intergenic 40.0%
ATCATTACTGCAATCTGGTC+TGG + chr2_1:64656522-64656541 None:intergenic 40.0%
GGAACATCATTACTGCAATC+TGG + chr2_1:64656527-64656546 None:intergenic 40.0%
CCTAAAAGGCTTTCAATCAG+AGG + chr2_1:64656728-64656747 None:intergenic 40.0%
! CCTCTGATTGAAAGCCTTTT+AGG - chr2_1:64656725-64656744 Msa0217700:intron 40.0%
ATCAACACTGCACACCTAAA+AGG + chr2_1:64656742-64656761 None:intergenic 40.0%
! TCCATCATGGTGTTTTATGG+TGG - chr2_1:64657062-64657081 Msa0217700:intron 40.0%
TCCACCATAAAACACCATGA+TGG + chr2_1:64657066-64657085 None:intergenic 40.0%
ACACACAATGTTATCAACGG+AGG + chr2_1:64657107-64657126 None:intergenic 40.0%
!! CAAGAAGGGTATCTGGATAT+AGG - chr2_1:64657588-64657607 Msa0217700:CDS 40.0%
GTATATGAGCAAATACCCCT+CGG + chr2_1:64657635-64657654 None:intergenic 40.0%
CAAACTTCTCCCCTAATTGA+TGG + chr2_1:64657877-64657896 None:intergenic 40.0%
CATCAATTAGGGGAGAAGTT+TGG - chr2_1:64657875-64657894 Msa0217700:intron 40.0%
ATCAAATAAGAGAACGCCGA+AGG - chr2_1:64657947-64657966 Msa0217700:intron 40.0%
AAATGGAAGCTGACTACCTT+CGG + chr2_1:64657966-64657985 None:intergenic 40.0%
CATAGTTCAACCACTCAAAC+CGG - chr2_1:64658046-64658065 Msa0217700:intron 40.0%
GTTTGACTGTTGTTCTGTTC+CGG + chr2_1:64658068-64658087 None:intergenic 40.0%
AACCGAATAGTTGACAGCAT+CGG - chr2_1:64658097-64658116 Msa0217700:intron 40.0%
AACCGATGCTGTCAACTATT+CGG + chr2_1:64658102-64658121 None:intergenic 40.0%
ACTGGTTGAACTGTATGGTT+CGG - chr2_1:64658131-64658150 Msa0217700:intron 40.0%
TCAGGATGCAATATGCTACA+TGG - chr2_1:64658220-64658239 Msa0217700:intron 40.0%
TTGTTTCCTCTTGTTGGAAG+TGG - chr2_1:64658261-64658280 Msa0217700:intron 40.0%
TGGCCATCATCAGTAATTAC+AGG + chr2_1:64658303-64658322 None:intergenic 40.0%
CCTGAAAGAAATCCAGACAA+GGG - chr2_1:64658348-64658367 Msa0217700:intron 40.0%
CAGACAAGAAACTAATCCAG+TGG - chr2_1:64658442-64658461 Msa0217700:CDS 40.0%
AAAGAAGTTGGATACGGTCA+AGG - chr2_1:64658694-64658713 Msa0217700:intron 40.0%
GAGACATTGCAAATGGTGTT+TGG + chr2_1:64658990-64659009 None:intergenic 40.0%
! GAATTATCATTGGGGAGCAT+AGG + chr2_1:64659060-64659079 None:intergenic 40.0%
! ATGATGAAGCAGACGCATTT+TGG - chr2_1:64659086-64659105 Msa0217700:intron 40.0%
!! GTTCTTGAACTTTTCAAGCG+AGG - chr2_1:64659251-64659270 Msa0217700:intron 40.0%
CGAGGAAATTTCAGATGTAC+TGG - chr2_1:64659269-64659288 Msa0217700:intron 40.0%
GGAGGCTCAACTAAGTAATT+TGG - chr2_1:64659307-64659326 Msa0217700:intron 40.0%
TGGAGAACAGAACATATTGG+TGG - chr2_1:64659604-64659623 Msa0217700:intron 40.0%
AGAACAGAACATATTGGTGG+AGG - chr2_1:64659607-64659626 Msa0217700:intron 40.0%
TGATTCATTGTACCTATGGG+AGG - chr2_1:64659690-64659709 Msa0217700:CDS 40.0%
GATAGTGTTAGAACACCAAC+TGG - chr2_1:64659844-64659863 Msa0217700:CDS 40.0%
! TTTCATTTTCCGCTACCAGT+TGG + chr2_1:64659862-64659881 None:intergenic 40.0%
GATCGTTTGCTTACACAGTT+CGG - chr2_1:64659911-64659930 Msa0217700:intron 40.0%
TAGACACATAAGAGAGGCAA+GGG + chr2_1:64660156-64660175 None:intergenic 40.0%
ATAGACACATAAGAGAGGCA+AGG + chr2_1:64660157-64660176 None:intergenic 40.0%
ATCAGCTTCTGTAAAAGCTG+AGG - chr2_1:64660421-64660440 Msa0217700:intron 40.0%
TCAGCTTCTGTAAAAGCTGA+GGG - chr2_1:64660422-64660441 Msa0217700:intron 40.0%
GCAAAGTCAATACGACAATG+TGG - chr2_1:64660458-64660477 Msa0217700:CDS 40.0%
! GATGTTGTCAAGGTTAGTCA+TGG - chr2_1:64660614-64660633 Msa0217700:intron 40.0%
AATAACACGCAAGATGTCAG+AGG + chr2_1:64660882-64660901 None:intergenic 40.0%
CAGATCTATGTGACGGTAAA+TGG + chr2_1:64661170-64661189 None:intergenic 40.0%
!! CAATGGATATGTTTGGTGCT+AGG + chr2_1:64661451-64661470 None:intergenic 40.0%
GTTCCCTCAGGGAATTTAAT+GGG + chr2_1:64661616-64661635 None:intergenic 40.0%
AGTTCCCTCAGGGAATTTAA+TGG + chr2_1:64661617-64661636 None:intergenic 40.0%
AACATACAACAGTTCCCTCA+GGG + chr2_1:64661627-64661646 None:intergenic 40.0%
TAACATACAACAGTTCCCTC+AGG + chr2_1:64661628-64661647 None:intergenic 40.0%
GACCACTCAATGACATGAAA+TGG + chr2_1:64661781-64661800 None:intergenic 40.0%
TGATGTGTATGTGTCGTGTC+CGG - chr2_1:64656758-64656777 Msa0217700:intron 45.0%
ACGGACACAAACATGAACAC+CGG + chr2_1:64656780-64656799 None:intergenic 45.0%
!! GTGATGACAAGTATTGGCCA+TGG - chr2_1:64656992-64657011 Msa0217700:intron 45.0%
TCTCCATGGCCAATTTGTGA+AGG - chr2_1:64657030-64657049 Msa0217700:intron 45.0%
CATCCTTCACAAATTGGCCA+TGG + chr2_1:64657036-64657055 None:intergenic 45.0%
CATGGCCAATTTGTGAAGGA+TGG - chr2_1:64657034-64657053 Msa0217700:intron 45.0%
TACCGCCATCCTTCACAAAT+TGG + chr2_1:64657042-64657061 None:intergenic 45.0%
ATGTTATCAACGGAGGATCG+CGG + chr2_1:64657100-64657119 None:intergenic 45.0%
!! TTGGCGATGCTACTTTGTTG+AGG - chr2_1:64657171-64657190 Msa0217700:CDS 45.0%
!! TGGCGATGCTACTTTGTTGA+GGG - chr2_1:64657172-64657191 Msa0217700:CDS 45.0%
TGTTATTACATGGCTCAGGC+TGG - chr2_1:64657525-64657544 Msa0217700:CDS 45.0%
!! ACTTTGAGACGAATCTACCG+AGG - chr2_1:64657615-64657634 Msa0217700:CDS 45.0%
!! CTTTGAGACGAATCTACCGA+GGG - chr2_1:64657616-64657635 Msa0217700:CDS 45.0%
! TTTGAGACGAATCTACCGAG+GGG - chr2_1:64657617-64657636 Msa0217700:CDS 45.0%
! GACAGGTTTTCCATCAAGCT+AGG + chr2_1:64657700-64657719 None:intergenic 45.0%
! TAATTGATGGATGGACTCCC+TGG + chr2_1:64657864-64657883 None:intergenic 45.0%
AGGGAGTCCATCCATCAATT+AGG - chr2_1:64657863-64657882 Msa0217700:intron 45.0%
GGGAGTCCATCCATCAATTA+GGG - chr2_1:64657864-64657883 Msa0217700:intron 45.0%
GGAGTCCATCCATCAATTAG+GGG - chr2_1:64657865-64657884 Msa0217700:intron 45.0%
CTTCTCCCCTAATTGATGGA+TGG + chr2_1:64657873-64657892 None:intergenic 45.0%
! GGTCTTGTCAGTTCAATGTC+CGG + chr2_1:64658019-64658038 None:intergenic 45.0%
CATTGAACTGACAAGACCTG+TGG - chr2_1:64658021-64658040 Msa0217700:intron 45.0%
! TTGTTCTGTTCCGGTTTGAG+TGG + chr2_1:64658059-64658078 None:intergenic 45.0%
!! TAGTTGACAGCATCGGTTCA+CGG - chr2_1:64658104-64658123 Msa0217700:intron 45.0%
CGCCAATTGTTTCCTCTTGT+TGG - chr2_1:64658255-64658274 Msa0217700:intron 45.0%
AATCGACCACTTCCAACAAG+AGG + chr2_1:64658270-64658289 None:intergenic 45.0%
TCATGGGGTCTTGAATTGGT+TGG + chr2_1:64658323-64658342 None:intergenic 45.0%
GCCTGAAAGAAATCCAGACA+AGG - chr2_1:64658347-64658366 Msa0217700:intron 45.0%
CCCTTGTCTGGATTTCTTTC+AGG + chr2_1:64658351-64658370 None:intergenic 45.0%
AGTACAGCTAATCCCTTGTC+TGG + chr2_1:64658363-64658382 None:intergenic 45.0%
GATGGAGAGTTAACATCCAC+TGG + chr2_1:64658461-64658480 None:intergenic 45.0%
! ATACGTTTCAGGTCTTGACG+TGG - chr2_1:64658582-64658601 Msa0217700:intron 45.0%
AAGTTGGATACGGTCAAGGT+GGG - chr2_1:64658698-64658717 Msa0217700:intron 45.0%
GTTAGAACACCAACTGGTAG+CGG - chr2_1:64659850-64659869 Msa0217700:CDS 45.0%
! GTCGTAGAGGTATGCACAAT+CGG + chr2_1:64659937-64659956 None:intergenic 45.0%
TAGCTGCTCTATAGTCGTAG+AGG + chr2_1:64659950-64659969 None:intergenic 45.0%
AGACACATAAGAGAGGCAAG+GGG + chr2_1:64660155-64660174 None:intergenic 45.0%
CTTTCAACACACCAGCAACA+AGG + chr2_1:64660553-64660572 None:intergenic 45.0%
AAATTACTCCATGAAGCGCG+AGG - chr2_1:64660584-64660603 Msa0217700:intron 45.0%
AGGCTTGGATGATGTTGTCA+AGG - chr2_1:64660604-64660623 Msa0217700:intron 45.0%
! TTGTCAAGGTTAGTCATGGG+AGG - chr2_1:64660618-64660637 Msa0217700:intron 45.0%
!! TGTTTGGTGCTAGGCTTTCT+TGG + chr2_1:64661442-64661461 None:intergenic 45.0%
TCCACCCATTAAATTCCCTG+AGG - chr2_1:64661609-64661628 Msa0217700:exon 45.0%
CCACCCATTAAATTCCCTGA+GGG - chr2_1:64661610-64661629 Msa0217700:exon 45.0%
GTGTATCCATCCAAAAGAGC+AGG - chr2_1:64661670-64661689 Msa0217700:five_prime_UTR 45.0%
CTTGTGATGTGGAGAGATCC+AGG - chr2_1:64656470-64656489 Msa0217700:three_prime_UTR 50.0%
GGCCAATTTGTGAAGGATGG+CGG - chr2_1:64657037-64657056 Msa0217700:intron 50.0%
! AAGGATGGCGGTATCCATCA+TGG - chr2_1:64657049-64657068 Msa0217700:intron 50.0%
GTGGTTGAACTATGAGCCAC+AGG + chr2_1:64658040-64658059 None:intergenic 50.0%
!! GCATCGGTTCACGGTTTAAC+TGG - chr2_1:64658113-64658132 Msa0217700:intron 50.0%
! TTGACGTGGTTCGCACTGAT+AGG - chr2_1:64658596-64658615 Msa0217700:intron 50.0%
! GGTTCGCACTGATAGGACAT+TGG - chr2_1:64658603-64658622 Msa0217700:intron 50.0%
GAAGTTGGATACGGTCAAGG+TGG - chr2_1:64658697-64658716 Msa0217700:intron 50.0%
! AGATGTACTGGTCGCACTCT+TGG - chr2_1:64659281-64659300 Msa0217700:intron 50.0%
! GATGTACTGGTCGCACTCTT+GGG - chr2_1:64659282-64659301 Msa0217700:intron 50.0%
! ATGTACTGGTCGCACTCTTG+GGG - chr2_1:64659283-64659302 Msa0217700:intron 50.0%
TCTTAGGCCCGACTGTTTGT+CGG + chr2_1:64660093-64660112 None:intergenic 50.0%
!! GTAAAAGCTGAGGGCGTCAA+AGG - chr2_1:64660431-64660450 Msa0217700:intron 50.0%
CACGCAAGATGTCAGAGGAA+CGG + chr2_1:64660877-64660896 None:intergenic 50.0%
TGCCAAAAAGGCTTGCGTTG+AGG - chr2_1:64660939-64660958 Msa0217700:intron 50.0%
! AGCCTCAACGCAAGCCTTTT+TGG + chr2_1:64660944-64660963 None:intergenic 50.0%
CCCTCAGGGAATTTAATGGG+TGG + chr2_1:64661613-64661632 None:intergenic 50.0%
! GTACCTATGGGAGGTGTGTC+TGG - chr2_1:64659699-64659718 Msa0217700:CDS 55.0%
AAGCCAGACACACCTCCCAT+AGG + chr2_1:64659705-64659724 None:intergenic 55.0%
AATACCCCTGAACCGTACCG+CGG - chr2_1:64660050-64660069 Msa0217700:intron 55.0%
TTAGGCCCGACTGTTTGTCG+GGG + chr2_1:64660091-64660110 None:intergenic 55.0%
CTTAGGCCCGACTGTTTGTC+GGG + chr2_1:64660092-64660111 None:intergenic 55.0%
TGAGCTAGCAAAGCTCCCTC+CGG + chr2_1:64660124-64660143 None:intergenic 55.0%
ACATAAGAGAGGCAAGGGGC+GGG + chr2_1:64660151-64660170 None:intergenic 55.0%
CACATAAGAGAGGCAAGGGG+CGG + chr2_1:64660152-64660171 None:intergenic 55.0%
TACTGGTCGCACTCTTGGGG+TGG - chr2_1:64659286-64659305 Msa0217700:intron 60.0%
ATACCCCTGAACCGTACCGC+GGG - chr2_1:64660051-64660070 Msa0217700:intron 60.0%
TAGGCCCGACTGTTTGTCGG+GGG + chr2_1:64660090-64660109 None:intergenic 60.0%
CAGTCGGGCCTAAGACACCA+AGG - chr2_1:64660098-64660117 Msa0217700:intron 60.0%
CCTAAGACACCAAGGCCGGA+GGG - chr2_1:64660106-64660125 Msa0217700:intron 60.0%
CATAAGAGAGGCAAGGGGCG+GGG + chr2_1:64660150-64660169 None:intergenic 60.0%
ACTCCATGAAGCGCGAGGCT+TGG - chr2_1:64660589-64660608 Msa0217700:intron 60.0%
CATCCAAGCCTCGCGCTTCA+TGG + chr2_1:64660595-64660614 None:intergenic 60.0%
TGGTCGCACTCTTGGGGTGG+AGG - chr2_1:64659289-64659308 Msa0217700:intron 65.0%
TACCCCTGAACCGTACCGCG+GGG - chr2_1:64660052-64660071 Msa0217700:intron 65.0%
ATCCCCCGCGGTACGGTTCA+GGG + chr2_1:64660058-64660077 None:intergenic 65.0%
TATCCCCCGCGGTACGGTTC+AGG + chr2_1:64660059-64660078 None:intergenic 65.0%
GACTGTTTGTCGGGGGAGGG+GGG + chr2_1:64660083-64660102 None:intergenic 65.0%
CGACTGTTTGTCGGGGGAGG+GGG + chr2_1:64660084-64660103 None:intergenic 65.0%
CCGACTGTTTGTCGGGGGAG+GGG + chr2_1:64660085-64660104 None:intergenic 65.0%
CCCCTCCCCCGACAAACAGT+CGG - chr2_1:64660082-64660101 Msa0217700:intron 65.0%
CCCGACTGTTTGTCGGGGGA+GGG + chr2_1:64660086-64660105 None:intergenic 65.0%
CCCTCCCCCGACAAACAGTC+GGG - chr2_1:64660083-64660102 Msa0217700:intron 65.0%
CGGGCCTAAGACACCAAGGC+CGG - chr2_1:64660102-64660121 Msa0217700:intron 65.0%
GCCTAAGACACCAAGGCCGG+AGG - chr2_1:64660105-64660124 Msa0217700:intron 65.0%
!! CCCTCCGGCCTTGGTGTCTT+AGG + chr2_1:64660109-64660128 None:intergenic 65.0%
AGCAAAGCTCCCTCCGGCCT+TGG + chr2_1:64660118-64660137 None:intergenic 65.0%
ACCCCTGAACCGTACCGCGG+GGG - chr2_1:64660053-64660072 Msa0217700:intron 70.0%
TCCCCCGCGGTACGGTTCAG+GGG + chr2_1:64660057-64660076 None:intergenic 70.0%
GGGGGATATCCCCCGCGGTA+CGG + chr2_1:64660065-64660084 None:intergenic 70.0%
GCCCGACTGTTTGTCGGGGG+AGG + chr2_1:64660087-64660106 None:intergenic 70.0%
GGGAGGGGGGATATCCCCCG+CGG + chr2_1:64660070-64660089 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 64656271 64661832 64656271 ID=Msa0217700;Name=Msa0217700
chr2_1 mRNA 64656271 64661832 64656271 ID=Msa0217700-mRNA-1;Parent=Msa0217700;Name=Msa0217700-mRNA-1;_AED=0.07;_eAED=0.07;_QI=205|0.88|0.9|1|0.88|0.9|10|380|414
chr2_1 exon 64656271 64656665 64656271 ID=Msa0217700-mRNA-1:exon:17946;Parent=Msa0217700-mRNA-1
chr2_1 exon 64657110 64657193 64657110 ID=Msa0217700-mRNA-1:exon:17945;Parent=Msa0217700-mRNA-1
chr2_1 exon 64657478 64657738 64657478 ID=Msa0217700-mRNA-1:exon:17944;Parent=Msa0217700-mRNA-1
chr2_1 exon 64658392 64658489 64658392 ID=Msa0217700-mRNA-1:exon:17943;Parent=Msa0217700-mRNA-1
chr2_1 exon 64658729 64658834 64658729 ID=Msa0217700-mRNA-1:exon:17942;Parent=Msa0217700-mRNA-1
chr2_1 exon 64658968 64659056 64658968 ID=Msa0217700-mRNA-1:exon:17941;Parent=Msa0217700-mRNA-1
chr2_1 exon 64659388 64659510 64659388 ID=Msa0217700-mRNA-1:exon:17940;Parent=Msa0217700-mRNA-1
chr2_1 exon 64659617 64659879 64659617 ID=Msa0217700-mRNA-1:exon:17939;Parent=Msa0217700-mRNA-1
chr2_1 exon 64660448 64660560 64660448 ID=Msa0217700-mRNA-1:exon:17938;Parent=Msa0217700-mRNA-1
chr2_1 exon 64661535 64661832 64661535 ID=Msa0217700-mRNA-1:exon:17937;Parent=Msa0217700-mRNA-1
chr2_1 five_prime_UTR 64661628 64661832 64661628 ID=Msa0217700-mRNA-1:five_prime_utr;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64661535 64661627 64661535 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64660448 64660560 64660448 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64659617 64659879 64659617 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64659388 64659510 64659388 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64658968 64659056 64658968 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64658729 64658834 64658729 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64658392 64658489 64658392 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64657478 64657738 64657478 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64657110 64657193 64657110 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 CDS 64656651 64656665 64656651 ID=Msa0217700-mRNA-1:cds;Parent=Msa0217700-mRNA-1
chr2_1 three_prime_UTR 64656271 64656650 64656271 ID=Msa0217700-mRNA-1:three_prime_utr;Parent=Msa0217700-mRNA-1
Gene Sequence

>Msa0217700

ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTATGAAACCAGACCAGATTGCAGTAATGATGTTCCCATCTCAAGATTCAAGATCAAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGATGCATTTACTCAAGAAGGGTATCTGGATATAGGCAAGACTTTGAGACGAATCTACCGAGGGGTATTTGCTCATATACAGATGCAATATGCTACATGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTCGATTTATCACATCACCTGTAATTACTGATGATGGCCAACCAATTCAAGACCCCATGATTATGCCTGAAAGAAATCCAGACAAGGGATTAGCTGTACTTCCTCAAGATAATAATAGGCCTTCAAGTATAGATTCTGTAAATAATTTAGAAAATGTGACAGACAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGACGTGGTTCGCACTGATAGGACATTGGTTTTTTATGAGAAACAAGAAAACTTGTCAAAATTATGGGATATTCTTGCAGTTTATGCTTGGATAGATAAAGAAGTTGGATACGGTCAAGGAATGAGTGACCTATGCTCCCCAATGATAATTCTTCTTGATGATGAAGCAGACGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTCGAGGAAATTTCAGATGTACTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAGTTGATCCAAAACTCCATAAACATATAGAACATATTGGTGGAGGCGACTATGTATTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGATGATGTGGGCTCTAGAGTATGATCCTTATTTGTTCTTGATGTATGAAGAAGCTCAATCAGCTTCTGTAAAAGCTGAGGGCGTCAAAGGAAAAGCAAAGTCAATACGACAATGTGGAAAATACGAGAGACAAAATATGAGAAATGGAGCAAAGAATGCTGAATCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTGGTGTGTTGAAAGATAAAAGTACAAAATTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGATATTGAATGACACAACAGGAAATCTAGATGCCAAAAAGGCTTGCGTTGAGGCTATGAAGCTTCACAAAAAATATTTGAGAAAGGCCAAGAAAGCCTAG

Protein sequence

>Msa0217700

MWRDPGVSADSFYETRPDCSNDVPISRFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRIYRGVFAHIQMQYATWKEECRQLFPLVGSGRFITSPVITDDGQPIQDPMIMPERNPDKGLAVLPQDNNRPSSIDSVNNLENVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVVDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPYLFLMYEEAQSASVKAEGVKGKAKSIRQCGKYERQNMRNGAKNAESPLPISVFLVAGVLKDKSTKLLHEARGLDDVVKILNDTTGNLDAKKACVEAMKLHKKYLRKAKKA*