Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822830 | sp|Q8VWJ2|WRK28_ARATH | 45.151 | 299 | 135 | 12 | 22 | 309 | 38 | 318 | 4.32e-56 | 187 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822830 | G7KD54 | 98.065 | 310 | 5 | 1 | 1 | 309 | 1 | 310 | 0.0 | 621 |
Gene ID | Type | Classification |
---|---|---|
Msa0822830 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0100090 | Msa0822830 | 0.800788 | 1.222751e-48 | -8.615850e-47 |
Msa0741740 | Msa0822830 | 0.880299 | 6.152880e-70 | -8.615850e-47 |
Msa0786430 | Msa0822830 | 0.877609 | 5.477311e-69 | -8.615850e-47 |
Msa0822830 | Msa0876360 | 0.801498 | 8.753580e-49 | -8.615850e-47 |
Msa0822830 | Msa1026410 | 0.800700 | 1.274171e-48 | -8.615850e-47 |
Msa0822830 | Msa1270660 | 0.815533 | 8.805441e-52 | -8.615850e-47 |
Msa0822830 | Msa1270730 | 0.817059 | 4.012240e-52 | -8.615850e-47 |
Msa0822830 | Msa1335230 | 0.814695 | 1.351417e-51 | -8.615850e-47 |
Msa0822830 | Msa1372150 | 0.800973 | 1.121098e-48 | -8.615850e-47 |
Msa0822830 | Msa1397120 | 0.805764 | 1.140061e-49 | -8.615850e-47 |
Msa0822830 | Msa1423820 | 0.814851 | 1.247875e-51 | -8.615850e-47 |
Msa0412840 | Msa0822830 | 0.803152 | 3.994864e-49 | -8.615850e-47 |
Msa0326110 | Msa0822830 | 0.804010 | 2.652219e-49 | -8.615850e-47 |
Msa0357830 | Msa0822830 | 0.807681 | 4.488543e-50 | -8.615850e-47 |
Msa0357840 | Msa0822830 | 0.807837 | 4.158846e-50 | -8.615850e-47 |
Msa0530650 | Msa0822830 | 0.801407 | 9.136561e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822830 | MtrunA17_Chr5g0443131 | 98.065 | 310 | 5 | 1 | 1 | 309 | 1 | 310 | 0.0 | 621 |
Msa0822830 | MtrunA17_Chr4g0051881 | 44.966 | 298 | 135 | 11 | 28 | 303 | 41 | 331 | 2.14e-58 | 191 |
Msa0822830 | MtrunA17_Chr1g0194481 | 46.193 | 197 | 84 | 4 | 125 | 301 | 125 | 319 | 2.37e-46 | 159 |
Msa0822830 | MtrunA17_Chr5g0418781 | 46.429 | 196 | 86 | 5 | 123 | 308 | 89 | 275 | 6.14e-46 | 156 |
Msa0822830 | MtrunA17_Chr7g0270191 | 46.809 | 188 | 87 | 5 | 121 | 301 | 108 | 289 | 1.06e-42 | 149 |
Msa0822830 | MtrunA17_Chr2g0294231 | 77.381 | 84 | 19 | 0 | 141 | 224 | 187 | 270 | 3.06e-41 | 147 |
Msa0822830 | MtrunA17_Chr4g0068541 | 55.556 | 108 | 39 | 2 | 141 | 248 | 192 | 290 | 7.49e-35 | 130 |
Msa0822830 | MtrunA17_Chr8g0335811 | 53.509 | 114 | 48 | 1 | 100 | 213 | 102 | 210 | 6.40e-34 | 124 |
Msa0822830 | MtrunA17_Chr7g0218081 | 43.353 | 173 | 84 | 4 | 64 | 233 | 323 | 484 | 2.67e-33 | 128 |
Msa0822830 | MtrunA17_Chr7g0218081 | 44.762 | 105 | 42 | 2 | 127 | 216 | 183 | 286 | 1.02e-18 | 86.3 |
Msa0822830 | MtrunA17_Chr7g0248721 | 52.893 | 121 | 52 | 2 | 95 | 215 | 83 | 198 | 1.10e-31 | 117 |
Msa0822830 | MtrunA17_Chr5g0418191 | 48.760 | 121 | 52 | 2 | 131 | 241 | 294 | 414 | 2.69e-31 | 121 |
Msa0822830 | MtrunA17_Chr5g0418191 | 41.071 | 112 | 50 | 3 | 157 | 261 | 151 | 253 | 4.61e-17 | 81.3 |
Msa0822830 | MtrunA17_Chr3g0129361 | 66.216 | 74 | 25 | 0 | 140 | 213 | 127 | 200 | 2.78e-31 | 116 |
Msa0822830 | MtrunA17_Chr5g0445311 | 51.402 | 107 | 49 | 1 | 138 | 244 | 345 | 448 | 2.03e-30 | 120 |
Msa0822830 | MtrunA17_Chr5g0445311 | 57.627 | 59 | 24 | 1 | 158 | 216 | 201 | 258 | 4.61e-14 | 72.4 |
Msa0822830 | MtrunA17_Chr3g0129321 | 44.538 | 119 | 60 | 1 | 117 | 229 | 72 | 190 | 4.55e-30 | 113 |
Msa0822830 | MtrunA17_Chr8g0383351 | 65.333 | 75 | 25 | 1 | 140 | 213 | 142 | 216 | 8.73e-30 | 113 |
Msa0822830 | MtrunA17_Chr7g0249311 | 41.611 | 149 | 78 | 3 | 115 | 254 | 345 | 493 | 1.14e-29 | 118 |
Msa0822830 | MtrunA17_Chr7g0249311 | 58.571 | 70 | 27 | 2 | 157 | 225 | 179 | 247 | 1.63e-17 | 83.2 |
Msa0822830 | MtrunA17_Chr4g0042831 | 60.000 | 80 | 32 | 0 | 138 | 217 | 259 | 338 | 2.26e-29 | 115 |
Msa0822830 | MtrunA17_Chr4g0042831 | 42.500 | 80 | 42 | 1 | 137 | 216 | 129 | 204 | 2.16e-15 | 75.9 |
Msa0822830 | MtrunA17_Chr3g0101131 | 57.303 | 89 | 37 | 1 | 138 | 226 | 396 | 483 | 2.57e-29 | 117 |
Msa0822830 | MtrunA17_Chr3g0101131 | 38.679 | 106 | 64 | 1 | 124 | 229 | 210 | 314 | 6.50e-14 | 72.0 |
Msa0822830 | MtrunA17_Chr3g0079691 | 50.485 | 103 | 46 | 1 | 121 | 218 | 454 | 556 | 3.33e-29 | 117 |
Msa0822830 | MtrunA17_Chr3g0079691 | 59.375 | 64 | 25 | 1 | 157 | 220 | 280 | 342 | 1.95e-17 | 82.8 |
Msa0822830 | MtrunA17_Chr1g0150801 | 66.234 | 77 | 25 | 1 | 137 | 213 | 83 | 158 | 9.74e-29 | 108 |
Msa0822830 | MtrunA17_Chr4g0004911 | 62.025 | 79 | 30 | 0 | 138 | 216 | 317 | 395 | 1.19e-28 | 114 |
Msa0822830 | MtrunA17_Chr4g0004911 | 46.392 | 97 | 51 | 1 | 157 | 253 | 184 | 279 | 1.16e-18 | 86.3 |
Msa0822830 | MtrunA17_Chr5g0432161 | 53.922 | 102 | 43 | 2 | 126 | 224 | 387 | 487 | 1.25e-28 | 115 |
Msa0822830 | MtrunA17_Chr5g0432161 | 55.000 | 60 | 26 | 1 | 157 | 216 | 244 | 302 | 4.13e-14 | 72.8 |
Msa0822830 | MtrunA17_Chr7g0243891 | 52.830 | 106 | 46 | 2 | 122 | 227 | 342 | 443 | 1.62e-28 | 114 |
Msa0822830 | MtrunA17_Chr7g0243891 | 56.250 | 64 | 27 | 1 | 157 | 220 | 216 | 278 | 2.04e-15 | 76.6 |
Msa0822830 | MtrunA17_Chr3g0106491 | 52.381 | 105 | 44 | 2 | 119 | 217 | 321 | 425 | 2.34e-28 | 114 |
Msa0822830 | MtrunA17_Chr3g0106491 | 51.471 | 68 | 32 | 1 | 157 | 224 | 198 | 264 | 1.28e-14 | 74.3 |
Msa0822830 | MtrunA17_Chr7g0224801 | 65.217 | 69 | 24 | 0 | 145 | 213 | 81 | 149 | 7.65e-28 | 106 |
Msa0822830 | MtrunA17_Chr7g0249301 | 56.790 | 81 | 35 | 0 | 138 | 218 | 273 | 353 | 3.56e-27 | 109 |
Msa0822830 | MtrunA17_Chr7g0249301 | 54.930 | 71 | 30 | 2 | 156 | 225 | 61 | 130 | 1.83e-16 | 79.0 |
Msa0822830 | MtrunA17_Chr7g0263531 | 45.455 | 121 | 52 | 2 | 119 | 225 | 309 | 429 | 1.42e-26 | 108 |
Msa0822830 | MtrunA17_Chr7g0263531 | 55.405 | 74 | 30 | 2 | 158 | 229 | 190 | 262 | 5.41e-17 | 80.9 |
Msa0822830 | MtrunA17_Chr3g0099641 | 31.513 | 238 | 116 | 7 | 82 | 288 | 171 | 392 | 1.99e-26 | 108 |
Msa0822830 | MtrunA17_Chr1g0188941 | 51.899 | 79 | 38 | 0 | 141 | 219 | 35 | 113 | 2.10e-26 | 100 |
Msa0822830 | MtrunA17_Chr8g0383251 | 54.762 | 84 | 38 | 0 | 135 | 218 | 86 | 169 | 4.46e-26 | 102 |
Msa0822830 | MtrunA17_Chr8g0386241 | 50.000 | 86 | 43 | 0 | 128 | 213 | 74 | 159 | 3.47e-25 | 99.8 |
Msa0822830 | MtrunA17_Chr2g0302391 | 34.132 | 167 | 105 | 3 | 90 | 255 | 146 | 308 | 6.77e-24 | 100 |
Msa0822830 | MtrunA17_Chr5g0447701 | 51.648 | 91 | 43 | 1 | 142 | 232 | 237 | 326 | 2.27e-22 | 96.3 |
Msa0822830 | MtrunA17_Chr7g0238921 | 66.667 | 57 | 19 | 0 | 157 | 213 | 124 | 180 | 6.94e-22 | 93.6 |
Msa0822830 | MtrunA17_Chr6g0485431 | 48.148 | 81 | 41 | 1 | 143 | 222 | 140 | 220 | 2.70e-21 | 92.8 |
Msa0822830 | MtrunA17_Chr1g0147881 | 40.187 | 107 | 62 | 2 | 123 | 227 | 227 | 333 | 5.21e-21 | 91.7 |
Msa0822830 | MtrunA17_Chr2g0288871 | 35.374 | 147 | 79 | 4 | 85 | 216 | 220 | 365 | 1.07e-20 | 92.4 |
Msa0822830 | MtrunA17_Chr2g0333851 | 50.000 | 82 | 38 | 2 | 139 | 217 | 149 | 230 | 2.31e-20 | 89.4 |
Msa0822830 | MtrunA17_Chr2g0322391 | 40.385 | 104 | 55 | 2 | 133 | 229 | 325 | 428 | 2.80e-20 | 91.3 |
Msa0822830 | MtrunA17_Chr4g0074001 | 47.500 | 80 | 42 | 0 | 138 | 217 | 340 | 419 | 4.60e-20 | 90.5 |
Msa0822830 | MtrunA17_Chr4g0075201 | 46.914 | 81 | 42 | 1 | 137 | 216 | 247 | 327 | 4.77e-20 | 90.1 |
Msa0822830 | MtrunA17_Chr1g0150281 | 40.594 | 101 | 50 | 4 | 119 | 213 | 101 | 197 | 5.47e-20 | 87.8 |
Msa0822830 | MtrunA17_Chr7g0270831 | 49.351 | 77 | 38 | 1 | 141 | 216 | 200 | 276 | 6.62e-20 | 89.4 |
Msa0822830 | MtrunA17_Chr4g0025061 | 43.269 | 104 | 52 | 2 | 137 | 233 | 340 | 443 | 9.99e-20 | 89.7 |
Msa0822830 | MtrunA17_Chr4g0025051 | 44.330 | 97 | 47 | 2 | 144 | 233 | 322 | 418 | 2.13e-19 | 88.6 |
Msa0822830 | MtrunA17_Chr4g0060271 | 47.436 | 78 | 40 | 1 | 140 | 216 | 238 | 315 | 2.23e-19 | 88.6 |
Msa0822830 | MtrunA17_Chr5g0401821 | 48.148 | 81 | 41 | 1 | 134 | 213 | 176 | 256 | 2.44e-19 | 85.9 |
Msa0822830 | MtrunA17_Chr4g0053281 | 34.615 | 182 | 108 | 5 | 54 | 231 | 164 | 338 | 2.59e-19 | 87.0 |
Msa0822830 | MtrunA17_Chr2g0284321 | 55.000 | 60 | 26 | 1 | 158 | 216 | 36 | 95 | 4.11e-19 | 84.0 |
Msa0822830 | MtrunA17_Chr8g0387501 | 55.556 | 63 | 27 | 1 | 156 | 217 | 128 | 190 | 5.22e-19 | 85.1 |
Msa0822830 | MtrunA17_Chr4g0051181 | 47.436 | 78 | 40 | 1 | 141 | 217 | 227 | 304 | 5.41e-19 | 87.0 |
Msa0822830 | MtrunA17_Chr3g0139021 | 42.553 | 94 | 53 | 1 | 122 | 214 | 279 | 372 | 5.93e-19 | 86.7 |
Msa0822830 | MtrunA17_Chr7g0216891 | 45.652 | 92 | 45 | 2 | 141 | 231 | 203 | 290 | 9.64e-19 | 86.7 |
Msa0822830 | MtrunA17_Chr8g0379461 | 47.500 | 80 | 41 | 1 | 140 | 218 | 59 | 138 | 1.42e-18 | 83.2 |
Msa0822830 | MtrunA17_Chr2g0319961 | 42.718 | 103 | 53 | 3 | 119 | 216 | 39 | 140 | 2.38e-18 | 82.8 |
Msa0822830 | MtrunA17_Chr3g0136961 | 51.667 | 60 | 28 | 1 | 155 | 213 | 136 | 195 | 2.95e-18 | 83.2 |
Msa0822830 | MtrunA17_Chr8g0348311 | 56.667 | 60 | 25 | 1 | 158 | 216 | 156 | 215 | 4.51e-18 | 83.2 |
Msa0822830 | MtrunA17_Chr7g0248691 | 54.098 | 61 | 27 | 1 | 158 | 217 | 155 | 215 | 1.02e-17 | 82.4 |
Msa0822830 | MtrunA17_Chr7g0270051 | 41.414 | 99 | 51 | 2 | 128 | 219 | 18 | 116 | 1.58e-17 | 80.9 |
Msa0822830 | MtrunA17_Chr2g0293481 | 55.738 | 61 | 26 | 1 | 158 | 217 | 268 | 328 | 1.81e-17 | 82.4 |
Msa0822830 | MtrunA17_Chr1g0184691 | 52.239 | 67 | 31 | 1 | 158 | 223 | 294 | 360 | 2.19e-17 | 81.6 |
Msa0822830 | MtrunA17_Chr4g0071521 | 44.578 | 83 | 44 | 2 | 133 | 213 | 220 | 302 | 2.99e-17 | 80.9 |
Msa0822830 | MtrunA17_Chr4g0001361 | 44.318 | 88 | 45 | 2 | 156 | 239 | 161 | 248 | 3.85e-17 | 80.5 |
Msa0822830 | MtrunA17_Chr1g0189391 | 46.479 | 71 | 37 | 1 | 144 | 213 | 84 | 154 | 1.12e-16 | 79.3 |
Msa0822830 | MtrunA17_Chr7g0228941 | 54.386 | 57 | 25 | 1 | 158 | 213 | 53 | 109 | 2.63e-16 | 73.9 |
Msa0822830 | MtrunA17_Chr1g0202461 | 46.429 | 84 | 43 | 2 | 158 | 240 | 262 | 344 | 5.72e-16 | 77.8 |
Msa0822830 | MtrunA17_Chr1g0150271 | 46.774 | 62 | 32 | 1 | 156 | 216 | 100 | 161 | 1.64e-15 | 74.7 |
Msa0822830 | MtrunA17_Chr3g0126391 | 37.931 | 116 | 50 | 6 | 115 | 215 | 84 | 192 | 2.15e-15 | 75.5 |
Msa0822830 | MtrunA17_Chr8g0387981 | 43.956 | 91 | 42 | 3 | 129 | 211 | 100 | 189 | 4.99e-15 | 74.7 |
Msa0822830 | MtrunA17_Chr4g0024391 | 37.500 | 104 | 58 | 2 | 137 | 233 | 209 | 312 | 7.26e-15 | 74.7 |
Msa0822830 | MtrunA17_Chr5g0447711 | 40.816 | 98 | 50 | 2 | 142 | 232 | 215 | 311 | 7.70e-15 | 73.9 |
Msa0822830 | MtrunA17_Chr5g0432071 | 46.667 | 75 | 38 | 2 | 157 | 230 | 104 | 177 | 1.72e-14 | 71.2 |
Msa0822830 | MtrunA17_Chr7g0275531 | 38.835 | 103 | 53 | 3 | 156 | 254 | 117 | 213 | 2.69e-14 | 72.4 |
Msa0822830 | MtrunA17_Chr8g0347251 | 33.065 | 124 | 74 | 3 | 96 | 211 | 71 | 193 | 7.39e-14 | 71.2 |
Msa0822830 | MtrunA17_Chr2g0289181 | 46.032 | 63 | 33 | 1 | 157 | 218 | 14 | 76 | 9.83e-14 | 69.3 |
Msa0822830 | MtrunA17_Chr2g0315381 | 35.484 | 124 | 54 | 3 | 156 | 253 | 143 | 266 | 1.89e-13 | 69.7 |
Msa0822830 | MtrunA17_Chr7g0244981 | 50.000 | 58 | 26 | 1 | 157 | 211 | 122 | 179 | 1.56e-12 | 66.6 |
Msa0822830 | MtrunA17_Chr2g0315361 | 50.847 | 59 | 26 | 1 | 156 | 211 | 147 | 205 | 1.95e-12 | 66.6 |
Msa0822830 | MtrunA17_Chr7g0244971 | 40.449 | 89 | 40 | 3 | 156 | 237 | 122 | 204 | 5.08e-12 | 65.5 |
Msa0822830 | MtrunA17_Chr1g0188961 | 46.552 | 58 | 28 | 1 | 177 | 234 | 3 | 57 | 9.88e-12 | 59.7 |
Msa0822830 | MtrunA17_Chr3g0128671 | 33.613 | 119 | 59 | 5 | 127 | 232 | 102 | 213 | 1.57e-11 | 63.9 |
Msa0822830 | MtrunA17_Chr8g0334541 | 48.276 | 58 | 27 | 1 | 157 | 211 | 103 | 160 | 2.19e-11 | 63.2 |
Msa0822830 | MtrunA17_Chr5g0428351 | 26.452 | 155 | 103 | 4 | 121 | 270 | 151 | 299 | 5.36e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0822830 | AT4G18170.1 | 45.151 | 299 | 135 | 12 | 22 | 309 | 38 | 318 | 4.39e-57 | 187 |
Msa0822830 | AT1G29860.1 | 45.936 | 283 | 119 | 9 | 33 | 303 | 17 | 277 | 2.58e-54 | 179 |
Msa0822830 | AT5G46350.1 | 46.429 | 224 | 98 | 6 | 34 | 249 | 71 | 280 | 2.77e-46 | 159 |
Msa0822830 | AT1G69310.4 | 42.009 | 219 | 96 | 6 | 90 | 303 | 92 | 284 | 1.10e-45 | 156 |
Msa0822830 | AT1G69310.2 | 42.009 | 219 | 96 | 6 | 90 | 303 | 92 | 284 | 1.10e-45 | 156 |
Msa0822830 | AT1G69310.1 | 42.009 | 219 | 96 | 6 | 90 | 303 | 92 | 284 | 1.10e-45 | 156 |
Msa0822830 | AT2G47260.1 | 62.931 | 116 | 39 | 2 | 127 | 241 | 143 | 255 | 8.14e-43 | 150 |
Msa0822830 | AT5G49520.1 | 47.802 | 182 | 70 | 4 | 141 | 301 | 205 | 382 | 7.06e-42 | 149 |
Msa0822830 | AT1G69310.3 | 40.183 | 219 | 96 | 7 | 90 | 303 | 92 | 280 | 4.48e-40 | 142 |
Msa0822830 | AT5G07100.2 | 49.275 | 138 | 61 | 2 | 90 | 227 | 83 | 211 | 7.28e-37 | 131 |
Msa0822830 | AT5G07100.2 | 43.836 | 73 | 41 | 0 | 157 | 229 | 24 | 96 | 6.03e-15 | 72.8 |
Msa0822830 | AT5G07100.4 | 49.275 | 138 | 61 | 2 | 90 | 227 | 83 | 211 | 7.28e-37 | 131 |
Msa0822830 | AT5G07100.4 | 43.836 | 73 | 41 | 0 | 157 | 229 | 24 | 96 | 6.03e-15 | 72.8 |
Msa0822830 | AT5G07100.5 | 49.275 | 138 | 61 | 2 | 90 | 227 | 83 | 211 | 7.28e-37 | 131 |
Msa0822830 | AT5G07100.5 | 43.836 | 73 | 41 | 0 | 157 | 229 | 24 | 96 | 6.03e-15 | 72.8 |
Msa0822830 | AT5G07100.3 | 49.275 | 138 | 61 | 2 | 90 | 227 | 83 | 211 | 7.28e-37 | 131 |
Msa0822830 | AT5G07100.3 | 43.836 | 73 | 41 | 0 | 157 | 229 | 24 | 96 | 6.03e-15 | 72.8 |
Msa0822830 | AT5G07100.1 | 49.275 | 138 | 61 | 2 | 90 | 227 | 176 | 304 | 1.43e-36 | 133 |
Msa0822830 | AT5G07100.1 | 43.836 | 73 | 41 | 0 | 157 | 229 | 117 | 189 | 9.21e-15 | 73.9 |
Msa0822830 | AT3G62340.1 | 62.353 | 85 | 32 | 0 | 135 | 219 | 96 | 180 | 1.17e-33 | 125 |
Msa0822830 | AT4G39410.1 | 67.073 | 82 | 27 | 0 | 132 | 213 | 198 | 279 | 2.02e-33 | 125 |
Msa0822830 | AT2G46130.1 | 67.500 | 80 | 26 | 0 | 136 | 215 | 9 | 88 | 3.71e-33 | 118 |
Msa0822830 | AT2G44745.1 | 64.286 | 84 | 29 | 1 | 130 | 213 | 119 | 201 | 5.44e-33 | 121 |
Msa0822830 | AT2G03340.1 | 40.719 | 167 | 85 | 3 | 57 | 217 | 317 | 475 | 4.57e-32 | 125 |
Msa0822830 | AT2G03340.1 | 59.091 | 66 | 25 | 2 | 157 | 222 | 250 | 313 | 2.16e-17 | 82.8 |
Msa0822830 | AT4G26640.5 | 35.751 | 193 | 110 | 3 | 84 | 271 | 136 | 319 | 2.19e-30 | 118 |
Msa0822830 | AT4G26640.5 | 52.857 | 70 | 32 | 1 | 157 | 226 | 35 | 103 | 4.79e-15 | 75.5 |
Msa0822830 | AT4G26640.6 | 35.751 | 193 | 110 | 3 | 84 | 271 | 136 | 319 | 2.19e-30 | 118 |
Msa0822830 | AT4G26640.6 | 52.857 | 70 | 32 | 1 | 157 | 226 | 35 | 103 | 4.79e-15 | 75.5 |
Msa0822830 | AT4G26640.4 | 35.751 | 193 | 110 | 3 | 84 | 271 | 136 | 319 | 2.19e-30 | 118 |
Msa0822830 | AT4G26640.4 | 52.857 | 70 | 32 | 1 | 157 | 226 | 35 | 103 | 4.79e-15 | 75.5 |
Msa0822830 | AT4G26640.3 | 35.751 | 193 | 110 | 3 | 84 | 271 | 136 | 319 | 2.19e-30 | 118 |
Msa0822830 | AT4G26640.3 | 52.857 | 70 | 32 | 1 | 157 | 226 | 35 | 103 | 4.79e-15 | 75.5 |
Msa0822830 | AT1G13960.2 | 62.025 | 79 | 30 | 0 | 138 | 216 | 237 | 315 | 2.56e-30 | 117 |
Msa0822830 | AT1G13960.2 | 59.701 | 67 | 25 | 2 | 157 | 222 | 76 | 141 | 8.15e-18 | 83.2 |
Msa0822830 | AT1G13960.1 | 62.025 | 79 | 30 | 0 | 138 | 216 | 390 | 468 | 3.95e-30 | 119 |
Msa0822830 | AT1G13960.1 | 59.701 | 67 | 25 | 2 | 157 | 222 | 229 | 294 | 5.59e-18 | 84.7 |
Msa0822830 | AT5G41570.1 | 53.763 | 93 | 43 | 0 | 123 | 215 | 64 | 156 | 7.31e-30 | 112 |
Msa0822830 | AT4G26640.1 | 43.571 | 140 | 65 | 3 | 84 | 218 | 240 | 370 | 9.42e-30 | 118 |
Msa0822830 | AT4G26640.1 | 52.857 | 70 | 32 | 1 | 157 | 226 | 139 | 207 | 5.22e-15 | 75.9 |
Msa0822830 | AT4G26640.7 | 43.571 | 140 | 65 | 3 | 84 | 218 | 272 | 402 | 9.73e-30 | 118 |
Msa0822830 | AT4G26640.7 | 52.857 | 70 | 32 | 1 | 157 | 226 | 171 | 239 | 5.00e-15 | 75.9 |
Msa0822830 | AT4G26640.2 | 43.571 | 140 | 65 | 3 | 84 | 218 | 312 | 442 | 1.16e-29 | 118 |
Msa0822830 | AT4G26640.2 | 52.857 | 70 | 32 | 1 | 157 | 226 | 211 | 279 | 4.67e-15 | 75.9 |
Msa0822830 | AT1G64000.1 | 60.000 | 85 | 33 | 1 | 131 | 215 | 89 | 172 | 1.33e-29 | 112 |
Msa0822830 | AT5G26170.1 | 64.286 | 70 | 25 | 0 | 144 | 213 | 100 | 169 | 4.01e-29 | 110 |
Msa0822830 | AT3G01080.2 | 52.747 | 91 | 43 | 0 | 126 | 216 | 313 | 403 | 1.11e-28 | 115 |
Msa0822830 | AT3G01080.2 | 54.412 | 68 | 30 | 1 | 157 | 224 | 205 | 271 | 5.47e-17 | 81.6 |
Msa0822830 | AT3G01970.1 | 62.857 | 70 | 26 | 0 | 144 | 213 | 52 | 121 | 1.38e-28 | 107 |
Msa0822830 | AT3G01080.1 | 52.747 | 91 | 43 | 0 | 126 | 216 | 275 | 365 | 1.66e-28 | 114 |
Msa0822830 | AT3G01080.1 | 54.412 | 68 | 30 | 1 | 157 | 224 | 167 | 233 | 6.79e-17 | 80.9 |
Msa0822830 | AT2G38470.1 | 59.302 | 86 | 34 | 1 | 138 | 223 | 343 | 427 | 1.90e-28 | 115 |
Msa0822830 | AT2G38470.1 | 58.333 | 60 | 24 | 1 | 157 | 216 | 184 | 242 | 1.62e-14 | 74.3 |
Msa0822830 | AT2G30250.1 | 62.651 | 83 | 31 | 0 | 138 | 220 | 309 | 391 | 2.83e-28 | 112 |
Msa0822830 | AT2G30250.1 | 41.000 | 100 | 53 | 2 | 131 | 230 | 145 | 238 | 6.32e-13 | 69.3 |
Msa0822830 | AT2G46130.2 | 62.500 | 80 | 26 | 1 | 136 | 215 | 9 | 84 | 8.56e-28 | 104 |
Msa0822830 | AT5G56270.1 | 56.790 | 81 | 35 | 0 | 138 | 218 | 468 | 548 | 1.06e-27 | 113 |
Msa0822830 | AT5G56270.1 | 61.667 | 60 | 22 | 1 | 157 | 216 | 273 | 331 | 1.24e-16 | 80.9 |
Msa0822830 | AT5G13080.1 | 64.286 | 70 | 25 | 0 | 144 | 213 | 54 | 123 | 4.18e-27 | 103 |
Msa0822830 | AT5G64810.1 | 49.533 | 107 | 48 | 3 | 127 | 229 | 76 | 180 | 7.96e-27 | 104 |
Msa0822830 | AT4G26440.1 | 45.600 | 125 | 56 | 2 | 123 | 237 | 328 | 450 | 2.29e-25 | 106 |
Msa0822830 | AT4G26440.1 | 56.667 | 60 | 25 | 1 | 157 | 216 | 178 | 236 | 1.02e-14 | 75.1 |
Msa0822830 | AT2G04880.2 | 51.648 | 91 | 44 | 0 | 137 | 227 | 263 | 353 | 4.14e-25 | 105 |
Msa0822830 | AT2G04880.2 | 53.030 | 66 | 28 | 2 | 156 | 221 | 110 | 172 | 1.02e-13 | 71.6 |
Msa0822830 | AT2G04880.1 | 51.648 | 91 | 44 | 0 | 137 | 227 | 287 | 377 | 5.51e-25 | 104 |
Msa0822830 | AT2G04880.1 | 46.154 | 91 | 44 | 4 | 156 | 246 | 110 | 195 | 1.52e-14 | 74.3 |
Msa0822830 | AT2G37260.3 | 47.899 | 119 | 52 | 5 | 119 | 234 | 233 | 344 | 3.19e-24 | 101 |
Msa0822830 | AT2G37260.3 | 48.315 | 89 | 40 | 3 | 158 | 241 | 86 | 173 | 6.83e-16 | 77.8 |
Msa0822830 | AT2G37260.2 | 47.899 | 119 | 52 | 5 | 119 | 234 | 231 | 342 | 3.30e-24 | 100 |
Msa0822830 | AT2G37260.2 | 48.315 | 89 | 40 | 3 | 158 | 241 | 84 | 171 | 7.06e-16 | 77.4 |
Msa0822830 | AT2G37260.1 | 47.899 | 119 | 52 | 5 | 119 | 234 | 313 | 424 | 5.56e-24 | 101 |
Msa0822830 | AT2G37260.1 | 54.286 | 70 | 28 | 2 | 158 | 224 | 166 | 234 | 8.28e-16 | 77.8 |
Msa0822830 | AT2G21900.1 | 41.905 | 105 | 57 | 2 | 130 | 230 | 78 | 182 | 1.19e-23 | 96.3 |
Msa0822830 | AT4G04450.2 | 42.373 | 118 | 61 | 2 | 121 | 231 | 162 | 279 | 1.53e-23 | 100 |
Msa0822830 | AT4G04450.1 | 42.373 | 118 | 61 | 2 | 121 | 231 | 256 | 373 | 5.17e-23 | 99.4 |
Msa0822830 | AT4G30935.1 | 44.118 | 102 | 51 | 2 | 141 | 240 | 315 | 412 | 1.36e-21 | 95.1 |
Msa0822830 | AT4G31800.2 | 48.750 | 80 | 40 | 1 | 156 | 234 | 110 | 189 | 2.23e-21 | 91.3 |
Msa0822830 | AT4G31800.1 | 48.750 | 80 | 40 | 1 | 156 | 234 | 175 | 254 | 4.01e-21 | 92.0 |
Msa0822830 | AT1G68150.1 | 39.683 | 126 | 62 | 3 | 141 | 265 | 219 | 331 | 5.87e-21 | 92.4 |
Msa0822830 | AT1G62300.1 | 36.601 | 153 | 78 | 4 | 79 | 216 | 224 | 372 | 1.06e-20 | 92.8 |
Msa0822830 | AT2G30590.1 | 41.228 | 114 | 63 | 3 | 104 | 213 | 257 | 370 | 1.21e-20 | 91.7 |
Msa0822830 | AT2G25000.2 | 56.452 | 62 | 26 | 1 | 156 | 216 | 102 | 163 | 1.29e-20 | 89.0 |
Msa0822830 | AT2G25000.4 | 56.452 | 62 | 26 | 1 | 156 | 216 | 102 | 163 | 1.29e-20 | 89.0 |
Msa0822830 | AT1G55600.1 | 53.425 | 73 | 34 | 0 | 144 | 216 | 294 | 366 | 1.68e-20 | 92.0 |
Msa0822830 | AT4G22070.4 | 48.148 | 81 | 41 | 1 | 137 | 216 | 277 | 357 | 1.94e-20 | 92.0 |
Msa0822830 | AT4G22070.3 | 48.148 | 81 | 41 | 1 | 137 | 216 | 277 | 357 | 1.94e-20 | 92.0 |
Msa0822830 | AT4G22070.2 | 48.148 | 81 | 41 | 1 | 137 | 216 | 277 | 357 | 1.94e-20 | 92.0 |
Msa0822830 | AT4G22070.1 | 48.148 | 81 | 41 | 1 | 137 | 216 | 277 | 357 | 1.94e-20 | 92.0 |
Msa0822830 | AT2G25000.3 | 56.452 | 62 | 26 | 1 | 156 | 216 | 124 | 185 | 2.08e-20 | 89.0 |
Msa0822830 | AT2G25000.1 | 56.452 | 62 | 26 | 1 | 156 | 216 | 145 | 206 | 3.10e-20 | 88.6 |
Msa0822830 | AT4G01250.1 | 40.217 | 92 | 52 | 2 | 126 | 216 | 99 | 188 | 2.06e-19 | 87.0 |
Msa0822830 | AT1G18860.1 | 48.718 | 78 | 39 | 1 | 140 | 216 | 222 | 299 | 2.74e-19 | 88.6 |
Msa0822830 | AT1G29280.1 | 56.452 | 62 | 26 | 1 | 158 | 218 | 75 | 136 | 4.50e-19 | 85.5 |
Msa0822830 | AT5G15130.2 | 36.641 | 131 | 74 | 2 | 96 | 225 | 132 | 254 | 6.87e-19 | 87.4 |
Msa0822830 | AT1G80840.1 | 41.667 | 96 | 51 | 2 | 132 | 222 | 117 | 212 | 7.12e-19 | 85.5 |
Msa0822830 | AT5G15130.1 | 36.641 | 131 | 74 | 2 | 96 | 225 | 174 | 296 | 7.88e-19 | 87.0 |
Msa0822830 | AT3G58710.1 | 42.857 | 105 | 55 | 2 | 119 | 218 | 29 | 133 | 1.04e-18 | 84.7 |
Msa0822830 | AT4G01720.1 | 34.615 | 130 | 81 | 2 | 88 | 216 | 173 | 299 | 1.96e-18 | 85.9 |
Msa0822830 | AT4G23550.1 | 54.545 | 66 | 29 | 1 | 152 | 216 | 135 | 200 | 2.89e-18 | 84.0 |
Msa0822830 | AT3G58710.2 | 43.810 | 105 | 53 | 3 | 119 | 218 | 29 | 132 | 7.52e-18 | 82.0 |
Msa0822830 | AT5G52830.1 | 57.377 | 61 | 25 | 1 | 158 | 217 | 166 | 226 | 8.70e-18 | 83.2 |
Msa0822830 | AT5G45050.4 | 43.564 | 101 | 54 | 3 | 126 | 225 | 1011 | 1109 | 1.76e-17 | 83.6 |
Msa0822830 | AT4G31550.2 | 41.975 | 81 | 46 | 1 | 134 | 213 | 222 | 302 | 1.85e-17 | 82.0 |
Msa0822830 | AT5G45050.1 | 44.000 | 100 | 53 | 3 | 126 | 224 | 1150 | 1247 | 1.90e-17 | 83.6 |
Msa0822830 | AT5G43290.1 | 58.621 | 58 | 24 | 0 | 157 | 214 | 114 | 171 | 1.93e-17 | 80.9 |
Msa0822830 | AT3G01080.3 | 54.412 | 68 | 30 | 1 | 157 | 224 | 205 | 271 | 1.96e-17 | 81.6 |
Msa0822830 | AT5G45050.2 | 45.745 | 94 | 48 | 3 | 132 | 224 | 1128 | 1219 | 1.98e-17 | 83.6 |
Msa0822830 | AT2G34830.1 | 56.667 | 60 | 25 | 1 | 158 | 216 | 216 | 275 | 2.82e-17 | 82.0 |
Msa0822830 | AT2G34830.2 | 56.667 | 60 | 25 | 1 | 158 | 216 | 225 | 284 | 3.12e-17 | 82.0 |
Msa0822830 | AT2G23320.1 | 45.679 | 81 | 43 | 1 | 134 | 213 | 217 | 297 | 3.33e-17 | 80.9 |
Msa0822830 | AT4G31550.1 | 40.964 | 83 | 48 | 1 | 132 | 213 | 221 | 303 | 3.83e-17 | 80.9 |
Msa0822830 | AT5G28650.1 | 41.573 | 89 | 51 | 1 | 126 | 213 | 231 | 319 | 9.15e-17 | 80.1 |
Msa0822830 | AT1G30650.1 | 55.000 | 60 | 26 | 1 | 158 | 216 | 218 | 277 | 1.37e-16 | 80.1 |
Msa0822830 | AT4G24240.1 | 43.373 | 83 | 45 | 2 | 133 | 213 | 256 | 338 | 2.11e-16 | 79.0 |
Msa0822830 | AT2G24570.1 | 40.476 | 84 | 49 | 1 | 132 | 214 | 218 | 301 | 2.13e-16 | 79.0 |
Msa0822830 | AT3G04670.1 | 40.449 | 89 | 52 | 1 | 126 | 213 | 231 | 319 | 4.49e-16 | 77.8 |
Msa0822830 | AT1G69810.2 | 45.570 | 79 | 41 | 2 | 140 | 216 | 128 | 206 | 4.19e-15 | 75.1 |
Msa0822830 | AT1G69810.1 | 45.570 | 79 | 41 | 2 | 140 | 216 | 186 | 264 | 4.44e-15 | 75.5 |
Msa0822830 | AT2G46400.1 | 40.816 | 98 | 52 | 3 | 121 | 215 | 69 | 163 | 2.28e-14 | 72.8 |
Msa0822830 | AT2G40750.1 | 32.877 | 146 | 83 | 5 | 106 | 239 | 99 | 241 | 6.06e-14 | 72.0 |
Msa0822830 | AT1G66560.1 | 51.724 | 58 | 25 | 1 | 157 | 211 | 103 | 160 | 1.12e-13 | 70.1 |
Msa0822830 | AT4G12020.4 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.14e-13 | 72.4 |
Msa0822830 | AT4G12020.4 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.81e-12 | 66.6 |
Msa0822830 | AT4G12020.10 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.15e-13 | 72.4 |
Msa0822830 | AT4G12020.10 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.00e-12 | 66.6 |
Msa0822830 | AT4G12020.6 | 38.400 | 125 | 67 | 3 | 56 | 177 | 544 | 661 | 1.17e-13 | 72.0 |
Msa0822830 | AT4G12020.6 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 6.76e-12 | 67.0 |
Msa0822830 | AT4G12020.8 | 38.400 | 125 | 67 | 3 | 56 | 177 | 544 | 661 | 1.17e-13 | 72.0 |
Msa0822830 | AT4G12020.8 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 6.76e-12 | 67.0 |
Msa0822830 | AT4G12020.2 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.24e-13 | 72.0 |
Msa0822830 | AT4G12020.2 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.75e-12 | 66.6 |
Msa0822830 | AT4G12020.3 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.25e-13 | 72.0 |
Msa0822830 | AT4G12020.3 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.20e-12 | 66.6 |
Msa0822830 | AT4G12020.11 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.29e-13 | 72.0 |
Msa0822830 | AT4G12020.11 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.92e-12 | 66.6 |
Msa0822830 | AT4G12020.7 | 38.400 | 125 | 67 | 3 | 56 | 177 | 544 | 661 | 1.29e-13 | 72.0 |
Msa0822830 | AT4G12020.7 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.42e-12 | 66.6 |
Msa0822830 | AT4G12020.5 | 38.583 | 127 | 64 | 3 | 56 | 177 | 477 | 594 | 1.29e-13 | 72.0 |
Msa0822830 | AT4G12020.5 | 43.421 | 76 | 42 | 1 | 156 | 231 | 400 | 474 | 8.44e-12 | 66.6 |
Msa0822830 | AT4G12020.1 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.30e-13 | 72.0 |
Msa0822830 | AT4G12020.1 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.77e-12 | 66.6 |
Msa0822830 | AT4G12020.9 | 38.583 | 127 | 64 | 3 | 56 | 177 | 544 | 661 | 1.30e-13 | 72.0 |
Msa0822830 | AT4G12020.9 | 43.421 | 76 | 42 | 1 | 156 | 231 | 467 | 541 | 7.77e-12 | 66.6 |
Msa0822830 | AT3G56400.1 | 38.400 | 125 | 67 | 5 | 95 | 215 | 61 | 179 | 4.21e-13 | 68.9 |
Msa0822830 | AT1G80590.1 | 43.662 | 71 | 37 | 1 | 158 | 225 | 86 | 156 | 1.09e-12 | 67.0 |
Msa0822830 | AT1G66600.1 | 50.847 | 59 | 26 | 1 | 156 | 211 | 102 | 160 | 1.55e-12 | 66.6 |
Msa0822830 | AT4G11070.2 | 50.000 | 58 | 26 | 1 | 157 | 211 | 109 | 166 | 4.56e-12 | 65.9 |
Msa0822830 | AT4G11070.1 | 50.000 | 58 | 26 | 1 | 157 | 211 | 141 | 198 | 5.16e-12 | 65.9 |
Msa0822830 | AT2G40740.1 | 42.500 | 80 | 40 | 2 | 157 | 230 | 173 | 252 | 1.27e-11 | 64.7 |
Msa0822830 | AT1G66550.2 | 49.123 | 57 | 26 | 1 | 158 | 211 | 104 | 160 | 1.51e-11 | 63.9 |
Msa0822830 | AT5G01900.1 | 50.877 | 57 | 25 | 1 | 158 | 211 | 111 | 167 | 1.71e-11 | 63.9 |
Msa0822830 | AT2G40740.3 | 42.500 | 80 | 40 | 2 | 157 | 230 | 182 | 261 | 1.72e-11 | 64.3 |
Msa0822830 | AT1G66550.1 | 49.123 | 57 | 26 | 1 | 158 | 211 | 109 | 165 | 1.80e-11 | 63.5 |
Msa0822830 | AT5G45260.1 | 38.532 | 109 | 60 | 4 | 123 | 225 | 1172 | 1279 | 4.93e-11 | 64.3 |
Msa0822830 | AT5G24110.1 | 45.763 | 59 | 29 | 1 | 156 | 211 | 112 | 170 | 6.89e-11 | 62.4 |
Find 80 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATATAGAGACTTAATTTA+TGG | 0.118571 | 5_3:+61215836 | None:intergenic |
CCATCTTCACACCCTAATTT+TGG | 0.163856 | 5_3:+61217237 | None:intergenic |
AAAGATAAGCAGCCAAAATT+AGG | 0.198323 | 5_3:-61217249 | Msa0822830:CDS |
TATATATAGCTTGGTGAATA+TGG | 0.256845 | 5_3:-61215687 | Msa0822830:three_prime_UTR |
GAGGATGATTCTGAAGATTT+TGG | 0.268686 | 5_3:+61217312 | None:intergenic |
GATGAGGTTGTGGAAGATTT+TGG | 0.287257 | 5_3:+61216014 | None:intergenic |
TATGTTGTCATCACAATTGA+TGG | 0.321462 | 5_3:+61216217 | None:intergenic |
GAGGAGAGAAGGTTGAATTA+TGG | 0.325115 | 5_3:+61217625 | None:intergenic |
GGATATAGATGGAGAAAATA+TGG | 0.326911 | 5_3:-61216635 | Msa0822830:CDS |
CCATTGAAGTGGAAGCAAAT+AGG | 0.331270 | 5_3:+61216116 | None:intergenic |
GCATTACCCCTGAGTGTTGC+TGG | 0.346247 | 5_3:+61216169 | None:intergenic |
CCTATTTGCTTCCACTTCAA+TGG | 0.351388 | 5_3:-61216116 | Msa0822830:CDS |
AGCTATAAGACTTAATTTGA+TGG | 0.363938 | 5_3:+61217688 | None:intergenic |
TTCCAACTTCGTCGTGACTA+TGG | 0.365043 | 5_3:-61215959 | Msa0822830:CDS |
ATATATATGCATACAAATCT+AGG | 0.369799 | 5_3:+61215780 | None:intergenic |
TGGCTGCTTATCTTTCTTGT+TGG | 0.381457 | 5_3:+61217257 | None:intergenic |
CTTTGTGTTGTTGTCATCAA+TGG | 0.382924 | 5_3:+61217383 | None:intergenic |
AGTGATTGAGTTCATCTTGA+TGG | 0.385025 | 5_3:+61217553 | None:intergenic |
TGCTTCCACTTCAATGGGAT+TGG | 0.385569 | 5_3:-61216110 | Msa0822830:CDS |
TATTCACCAAGCTATATATA+TGG | 0.386825 | 5_3:+61215690 | None:intergenic |
CATTGAAGTGGAAGCAAATA+GGG | 0.387044 | 5_3:+61216117 | None:intergenic |
TTACTACCATCATCATTTCC+TGG | 0.387601 | 5_3:-61215923 | Msa0822830:CDS |
TACTTTAGTATATAAGTTCA+AGG | 0.390389 | 5_3:+61215890 | None:intergenic |
GGAGATTTATCATCACTAGT+AGG | 0.395111 | 5_3:-61217348 | Msa0822830:CDS |
GTTTCAAAGTTGTAAATTTG+AGG | 0.396404 | 5_3:-61215620 | Msa0822830:three_prime_UTR |
TCATCACAATTGATGGATCT+TGG | 0.397918 | 5_3:+61216224 | None:intergenic |
GGAAAATTTGTTGATCGCTT+TGG | 0.406223 | 5_3:+61216038 | None:intergenic |
CTATTTGCTTCCACTTCAAT+GGG | 0.415381 | 5_3:-61216115 | Msa0822830:CDS |
TAAAATATATGCTGATCAAA+TGG | 0.427798 | 5_3:+61215643 | None:intergenic |
TAGGTATACAGAACAAGTTA+AGG | 0.430151 | 5_3:+61215799 | None:intergenic |
TCCATCTATATCCATCTTCA+AGG | 0.432417 | 5_3:+61216645 | None:intergenic |
GGATATACTACAGATTCAAA+TGG | 0.436320 | 5_3:+61215857 | None:intergenic |
GAAACTGAGAAAAGAAATCT+TGG | 0.441450 | 5_3:+61216074 | None:intergenic |
AAGATAAGCAGCCAAAATTA+GGG | 0.445322 | 5_3:-61217248 | Msa0822830:CDS |
TGATAGGGTGTTGTAGTCCA+TGG | 0.448321 | 5_3:+61217449 | None:intergenic |
GCCATGGAAGAGAGAAGAAA+AGG | 0.449660 | 5_3:+61217597 | None:intergenic |
AGAAGTGCATTGTGAAGAAA+AGG | 0.456809 | 5_3:-61216261 | Msa0822830:CDS |
TGCTGTTGCTGATGAGGTTG+TGG | 0.472117 | 5_3:+61216004 | None:intergenic |
AAAAGGTGAGTGAGGAGAGA+AGG | 0.476270 | 5_3:+61217614 | None:intergenic |
TGAGTGTTGCTGGGCAGTGA+TGG | 0.485817 | 5_3:+61216179 | None:intergenic |
TGATCGCTTTGGCTATAAGT+TGG | 0.486588 | 5_3:+61216049 | None:intergenic |
AAGGAGGAGTGTGTAAAAGT+AGG | 0.493096 | 5_3:-61217779 | Msa0822830:five_prime_UTR |
TGTTAACCATATATATAGCT+TGG | 0.494226 | 5_3:-61215696 | Msa0822830:three_prime_UTR |
AAATAATTTAACCTTGGGTA+CGG | 0.496177 | 5_3:+61216590 | None:intergenic |
GAGATTGATCACCTTGAAGA+TGG | 0.500355 | 5_3:-61216656 | Msa0822830:CDS |
ATCACTGCCCAGCAACACTC+AGG | 0.501416 | 5_3:-61216177 | Msa0822830:CDS |
ACCTTGAAGATGGATATAGA+TGG | 0.501904 | 5_3:-61216646 | Msa0822830:CDS |
CCAAAATTAGGGTGTGAAGA+TGG | 0.502839 | 5_3:-61217237 | Msa0822830:CDS |
AGGTATACAGAACAAGTTAA+GGG | 0.504936 | 5_3:+61215800 | None:intergenic |
AGTTTCAGTGACTATTTACA+AGG | 0.509885 | 5_3:-61217474 | Msa0822830:CDS |
TGACTATTTACAAGGTTCCA+TGG | 0.510765 | 5_3:-61217466 | Msa0822830:CDS |
AAACTTGTACTATGAGAAGA+AGG | 0.518284 | 5_3:+61217492 | None:intergenic |
GAGAGAAGAAAAGGTGAGTG+AGG | 0.518848 | 5_3:+61217606 | None:intergenic |
GAGATTTATCATCACTAGTA+GGG | 0.519054 | 5_3:-61217347 | Msa0822830:CDS |
AACCATAGTCACGACGAAGT+TGG | 0.520777 | 5_3:+61215957 | None:intergenic |
GATATACTACAGATTCAAAT+GGG | 0.523306 | 5_3:+61215858 | None:intergenic |
TTGCTCCAATCCCATTGAAG+TGG | 0.528723 | 5_3:+61216105 | None:intergenic |
TAAATTTGAGGTGAGGATGA+TGG | 0.530073 | 5_3:-61215608 | Msa0822830:three_prime_UTR |
TGTTGTTGCTGTTGCTGATG+AGG | 0.533557 | 5_3:+61215998 | None:intergenic |
CATTACCCCTGAGTGTTGCT+GGG | 0.536203 | 5_3:+61216170 | None:intergenic |
GAGGAGTGTGTAAAAGTAGG+AGG | 0.544818 | 5_3:-61217776 | Msa0822830:five_prime_UTR |
TTGAGTTCATCTTGATGGAA+AGG | 0.547448 | 5_3:+61217558 | None:intergenic |
AAAGTTGTAAATTTGAGGTG+AGG | 0.555382 | 5_3:-61215615 | Msa0822830:three_prime_UTR |
ATTGTGATGACAACATATGA+AGG | 0.558492 | 5_3:-61216211 | Msa0822830:CDS |
TTAGTCAAGAATGCAAACCT+TGG | 0.566799 | 5_3:+61216683 | None:intergenic |
ATCATGATTCTCATTAGCCA+TGG | 0.579134 | 5_3:+61217581 | None:intergenic |
TATCACAGCTTCATTAGATG+AGG | 0.580828 | 5_3:+61217293 | None:intergenic |
AACACAAAGAAATCTAGTGC+AGG | 0.593942 | 5_3:-61217369 | Msa0822830:CDS |
GCGGATGATGATGATGCACT+TGG | 0.605313 | 5_3:-61215727 | Msa0822830:three_prime_UTR |
TCACTGCCCAGCAACACTCA+GGG | 0.607605 | 5_3:-61216176 | Msa0822830:CDS |
GGTGAGGATGATGGTTTGAA+AGG | 0.624990 | 5_3:-61215599 | Msa0822830:three_prime_UTR |
TGAAGAACAAGACAAGTCAA+AGG | 0.626003 | 5_3:+61217422 | None:intergenic |
TCAAGAATAGTCCGTACCCA+AGG | 0.626808 | 5_3:-61216601 | Msa0822830:intron |
TTAAGAACTAATTATTACTG+CGG | 0.630487 | 5_3:-61215746 | Msa0822830:three_prime_UTR |
GTGCATTGTGAAGAAAAGGG+TGG | 0.634026 | 5_3:-61216257 | Msa0822830:CDS |
GAAGTGCATTGTGAAGAAAA+GGG | 0.651750 | 5_3:-61216260 | Msa0822830:CDS |
GAAGTGGAAGCAAATAGGGA+TGG | 0.655945 | 5_3:+61216121 | None:intergenic |
CACTGCCCAGCAACACTCAG+GGG | 0.674656 | 5_3:-61216175 | Msa0822830:CDS |
TGGTGATGATGACAACAACA+TGG | 0.706923 | 5_3:+61216141 | None:intergenic |
TGATGATGACAACAACATGG+AGG | 0.818574 | 5_3:+61216144 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTACTAAATTTGAAAAT+TGG | + | chr5_3:61216777-61216796 | None:intergenic | 10.0% |
!!! | TAATTTTTTGTCAAAATTAA+TGG | - | chr5_3:61216791-61216810 | Msa0822830:intron | 10.0% |
!! | AAATTACTAAATTTGAAAAT+TGG | + | chr5_3:61216777-61216796 | None:intergenic | 10.0% |
!!! | TAATTTTTTGTCAAAATTAA+TGG | - | chr5_3:61216791-61216810 | Msa0822830:intron | 10.0% |
!!! | TTTTCATTGAATTACTATAA+TGG | - | chr5_3:61216339-61216358 | Msa0822830:intron | 15.0% |
!!! | TTTTCATTGAATTACTATAA+TGG | - | chr5_3:61216339-61216358 | Msa0822830:intron | 15.0% |
!!! | AAAAAAGTTAGCTTTATTTC+TGG | - | chr5_3:61215692-61215711 | Msa0822830:three_prime_UTR | 20.0% |
!! | CAAAAAATCATGAAGAAAAA+GGG | + | chr5_3:61216190-61216209 | None:intergenic | 20.0% |
!! | TCAAAAAATCATGAAGAAAA+AGG | + | chr5_3:61216191-61216210 | None:intergenic | 20.0% |
!!! | ATGATTTTTTGATAGATCAA+TGG | - | chr5_3:61216199-61216218 | Msa0822830:CDS | 20.0% |
!!! | ATTTTTTGTTGTTTACTTTG+TGG | - | chr5_3:61216304-61216323 | Msa0822830:intron | 20.0% |
!! | TTGTGTATATATGACTAAAA+TGG | - | chr5_3:61216477-61216496 | Msa0822830:intron | 20.0% |
!! | TAAGAAATGTATGTACATTA+GGG | + | chr5_3:61216519-61216538 | None:intergenic | 20.0% |
!! | ATAAGAAATGTATGTACATT+AGG | + | chr5_3:61216520-61216539 | None:intergenic | 20.0% |
!! | ATTGGAAATAATTTAACCTT+GGG | + | chr5_3:61216759-61216778 | None:intergenic | 20.0% |
!! | AATTGGAAATAATTTAACCT+TGG | + | chr5_3:61216760-61216779 | None:intergenic | 20.0% |
!!! | GAATTAGTTTCAGATTTTAA+AGG | + | chr5_3:61216830-61216849 | None:intergenic | 20.0% |
!! | TACTTTAGTATATAAGTTCA+AGG | + | chr5_3:61217454-61217473 | None:intergenic | 20.0% |
!! | CTATATAGAGACTTAATTTA+TGG | + | chr5_3:61217508-61217527 | None:intergenic | 20.0% |
!! | ATATATATGCATACAAATCT+AGG | + | chr5_3:61217564-61217583 | None:intergenic | 20.0% |
!! | TTAAGAACTAATTATTACTG+CGG | - | chr5_3:61217595-61217614 | Msa0822830:exon | 20.0% |
!! | TAAAATATATGCTGATCAAA+TGG | + | chr5_3:61217701-61217720 | None:intergenic | 20.0% |
!!! | TACTATGTTGATATTTTGAT+AGG | - | chr5_3:61217775-61217794 | Msa0822830:five_prime_UTR | 20.0% |
!!! | AAAAAAGTTAGCTTTATTTC+TGG | - | chr5_3:61215692-61215711 | Msa0822830:three_prime_UTR | 20.0% |
!! | CAAAAAATCATGAAGAAAAA+GGG | + | chr5_3:61216190-61216209 | None:intergenic | 20.0% |
!! | TCAAAAAATCATGAAGAAAA+AGG | + | chr5_3:61216191-61216210 | None:intergenic | 20.0% |
!!! | ATGATTTTTTGATAGATCAA+TGG | - | chr5_3:61216199-61216218 | Msa0822830:CDS | 20.0% |
!!! | ATTTTTTGTTGTTTACTTTG+TGG | - | chr5_3:61216304-61216323 | Msa0822830:intron | 20.0% |
!! | TTGTGTATATATGACTAAAA+TGG | - | chr5_3:61216477-61216496 | Msa0822830:intron | 20.0% |
!! | TAAGAAATGTATGTACATTA+GGG | + | chr5_3:61216519-61216538 | None:intergenic | 20.0% |
!! | ATAAGAAATGTATGTACATT+AGG | + | chr5_3:61216520-61216539 | None:intergenic | 20.0% |
!! | ATTGGAAATAATTTAACCTT+GGG | + | chr5_3:61216759-61216778 | None:intergenic | 20.0% |
!! | AATTGGAAATAATTTAACCT+TGG | + | chr5_3:61216760-61216779 | None:intergenic | 20.0% |
!!! | GAATTAGTTTCAGATTTTAA+AGG | + | chr5_3:61216830-61216849 | None:intergenic | 20.0% |
!! | TACTTTAGTATATAAGTTCA+AGG | + | chr5_3:61217454-61217473 | None:intergenic | 20.0% |
!! | CTATATAGAGACTTAATTTA+TGG | + | chr5_3:61217508-61217527 | None:intergenic | 20.0% |
!! | ATATATATGCATACAAATCT+AGG | + | chr5_3:61217564-61217583 | None:intergenic | 20.0% |
!! | TTAAGAACTAATTATTACTG+CGG | - | chr5_3:61217595-61217614 | Msa0822830:exon | 20.0% |
!! | TAAAATATATGCTGATCAAA+TGG | + | chr5_3:61217701-61217720 | None:intergenic | 20.0% |
!!! | TACTATGTTGATATTTTGAT+AGG | - | chr5_3:61217775-61217794 | Msa0822830:five_prime_UTR | 20.0% |
!! | AGCTATAAGACTTAATTTGA+TGG | + | chr5_3:61215656-61215675 | None:intergenic | 25.0% |
!! | TCATTTTCACAAAACTTTCA+AGG | - | chr5_3:61215819-61215838 | Msa0822830:three_prime_UTR | 25.0% |
!!! | ATTTTTTGATAGATCAATGG+AGG | - | chr5_3:61216202-61216221 | Msa0822830:CDS | 25.0% |
!!! | TTTTTTGATAGATCAATGGA+GGG | - | chr5_3:61216203-61216222 | Msa0822830:CDS | 25.0% |
! | ACACTGAAAATGTCATAATT+AGG | + | chr5_3:61216386-61216405 | None:intergenic | 25.0% |
! | TGTATATATGACTAAAATGG+TGG | - | chr5_3:61216480-61216499 | Msa0822830:intron | 25.0% |
! | TACATTTCTTATGATGAGTT+TGG | - | chr5_3:61216528-61216547 | Msa0822830:intron | 25.0% |
! | ATTGTTGTGAATTTGTCTAA+TGG | - | chr5_3:61216583-61216602 | Msa0822830:intron | 25.0% |
! | AAATAATTTAACCTTGGGTA+CGG | + | chr5_3:61216754-61216773 | None:intergenic | 25.0% |
! | TTTGTCAAAATTAATGGTTG+TGG | - | chr5_3:61216797-61216816 | Msa0822830:intron | 25.0% |
! | TATGACATGAAATATGGAAT+AGG | + | chr5_3:61216987-61217006 | None:intergenic | 25.0% |
! | TTATGCTATGACATGAAATA+TGG | + | chr5_3:61216993-61217012 | None:intergenic | 25.0% |
! | TATGTATATGTATACAATGC+AGG | - | chr5_3:61217035-61217054 | Msa0822830:intron | 25.0% |
! | GATATACTACAGATTCAAAT+GGG | + | chr5_3:61217486-61217505 | None:intergenic | 25.0% |
! | TGTTAACCATATATATAGCT+TGG | - | chr5_3:61217645-61217664 | Msa0822830:five_prime_UTR | 25.0% |
! | TATTCACCAAGCTATATATA+TGG | + | chr5_3:61217654-61217673 | None:intergenic | 25.0% |
!! | TATATATAGCTTGGTGAATA+TGG | - | chr5_3:61217654-61217673 | Msa0822830:five_prime_UTR | 25.0% |
! | GTTTCAAAGTTGTAAATTTG+AGG | - | chr5_3:61217721-61217740 | Msa0822830:five_prime_UTR | 25.0% |
!! | AGCTATAAGACTTAATTTGA+TGG | + | chr5_3:61215656-61215675 | None:intergenic | 25.0% |
!! | TCATTTTCACAAAACTTTCA+AGG | - | chr5_3:61215819-61215838 | Msa0822830:three_prime_UTR | 25.0% |
!!! | ATTTTTTGATAGATCAATGG+AGG | - | chr5_3:61216202-61216221 | Msa0822830:CDS | 25.0% |
!!! | TTTTTTGATAGATCAATGGA+GGG | - | chr5_3:61216203-61216222 | Msa0822830:CDS | 25.0% |
! | ACACTGAAAATGTCATAATT+AGG | + | chr5_3:61216386-61216405 | None:intergenic | 25.0% |
! | TGTATATATGACTAAAATGG+TGG | - | chr5_3:61216480-61216499 | Msa0822830:intron | 25.0% |
! | TACATTTCTTATGATGAGTT+TGG | - | chr5_3:61216528-61216547 | Msa0822830:intron | 25.0% |
! | ATTGTTGTGAATTTGTCTAA+TGG | - | chr5_3:61216583-61216602 | Msa0822830:intron | 25.0% |
! | AAATAATTTAACCTTGGGTA+CGG | + | chr5_3:61216754-61216773 | None:intergenic | 25.0% |
! | TTTGTCAAAATTAATGGTTG+TGG | - | chr5_3:61216797-61216816 | Msa0822830:intron | 25.0% |
! | TATGACATGAAATATGGAAT+AGG | + | chr5_3:61216987-61217006 | None:intergenic | 25.0% |
! | TTATGCTATGACATGAAATA+TGG | + | chr5_3:61216993-61217012 | None:intergenic | 25.0% |
! | TATGTATATGTATACAATGC+AGG | - | chr5_3:61217035-61217054 | Msa0822830:intron | 25.0% |
! | GATATACTACAGATTCAAAT+GGG | + | chr5_3:61217486-61217505 | None:intergenic | 25.0% |
! | TGTTAACCATATATATAGCT+TGG | - | chr5_3:61217645-61217664 | Msa0822830:five_prime_UTR | 25.0% |
! | TATTCACCAAGCTATATATA+TGG | + | chr5_3:61217654-61217673 | None:intergenic | 25.0% |
!! | TATATATAGCTTGGTGAATA+TGG | - | chr5_3:61217654-61217673 | Msa0822830:five_prime_UTR | 25.0% |
! | GTTTCAAAGTTGTAAATTTG+AGG | - | chr5_3:61217721-61217740 | Msa0822830:five_prime_UTR | 25.0% |
AAACTTGTACTATGAGAAGA+AGG | + | chr5_3:61215852-61215871 | None:intergenic | 30.0% | |
AGTTTCAGTGACTATTTACA+AGG | - | chr5_3:61215867-61215886 | Msa0822830:three_prime_UTR | 30.0% | |
GAGATTTATCATCACTAGTA+GGG | - | chr5_3:61215994-61216013 | Msa0822830:CDS | 30.0% | |
AAAGATAAGCAGCCAAAATT+AGG | - | chr5_3:61216092-61216111 | Msa0822830:CDS | 30.0% | |
AAGATAAGCAGCCAAAATTA+GGG | - | chr5_3:61216093-61216112 | Msa0822830:CDS | 30.0% | |
TGAAAAGTCTAAGAAAGAGT+AGG | - | chr5_3:61216133-61216152 | Msa0822830:CDS | 30.0% | |
CTTGTCTATATTAAGTACAG+TGG | - | chr5_3:61216431-61216450 | Msa0822830:intron | 30.0% | |
! | TATGACTAAAATGGTGGAAA+AGG | - | chr5_3:61216486-61216505 | Msa0822830:intron | 30.0% |
TGTGAATTTGTCTAATGGTT+TGG | - | chr5_3:61216588-61216607 | Msa0822830:intron | 30.0% | |
!!! | CTAATGGTTTGGTGTATTTT+AGG | - | chr5_3:61216599-61216618 | Msa0822830:intron | 30.0% |
!! | TTTGGTGTATTTTAGGAACA+AGG | - | chr5_3:61216606-61216625 | Msa0822830:CDS | 30.0% |
GGCTAAAAAGAAAGAGAAAA+AGG | - | chr5_3:61216627-61216646 | Msa0822830:CDS | 30.0% | |
GGATATAGATGGAGAAAATA+TGG | - | chr5_3:61216706-61216725 | Msa0822830:CDS | 30.0% | |
GAAATATGGAATAGGATTAG+AGG | + | chr5_3:61216979-61216998 | None:intergenic | 30.0% | |
TATGTTGTCATCACAATTGA+TGG | + | chr5_3:61217127-61217146 | None:intergenic | 30.0% | |
ATTGTGATGACAACATATGA+AGG | - | chr5_3:61217130-61217149 | Msa0822830:intron | 30.0% | |
GAAACTGAGAAAAGAAATCT+TGG | + | chr5_3:61217270-61217289 | None:intergenic | 30.0% | |
GGATATACTACAGATTCAAA+TGG | + | chr5_3:61217487-61217506 | None:intergenic | 30.0% | |
AGGTATACAGAACAAGTTAA+GGG | + | chr5_3:61217544-61217563 | None:intergenic | 30.0% | |
TAGGTATACAGAACAAGTTA+AGG | + | chr5_3:61217545-61217564 | None:intergenic | 30.0% | |
! | AAAGTTGTAAATTTGAGGTG+AGG | - | chr5_3:61217726-61217745 | Msa0822830:five_prime_UTR | 30.0% |
AAACTTGTACTATGAGAAGA+AGG | + | chr5_3:61215852-61215871 | None:intergenic | 30.0% | |
AGTTTCAGTGACTATTTACA+AGG | - | chr5_3:61215867-61215886 | Msa0822830:three_prime_UTR | 30.0% | |
GAGATTTATCATCACTAGTA+GGG | - | chr5_3:61215994-61216013 | Msa0822830:CDS | 30.0% | |
AAAGATAAGCAGCCAAAATT+AGG | - | chr5_3:61216092-61216111 | Msa0822830:CDS | 30.0% | |
AAGATAAGCAGCCAAAATTA+GGG | - | chr5_3:61216093-61216112 | Msa0822830:CDS | 30.0% | |
TGAAAAGTCTAAGAAAGAGT+AGG | - | chr5_3:61216133-61216152 | Msa0822830:CDS | 30.0% | |
CTTGTCTATATTAAGTACAG+TGG | - | chr5_3:61216431-61216450 | Msa0822830:intron | 30.0% | |
! | TATGACTAAAATGGTGGAAA+AGG | - | chr5_3:61216486-61216505 | Msa0822830:intron | 30.0% |
TGTGAATTTGTCTAATGGTT+TGG | - | chr5_3:61216588-61216607 | Msa0822830:intron | 30.0% | |
!!! | CTAATGGTTTGGTGTATTTT+AGG | - | chr5_3:61216599-61216618 | Msa0822830:intron | 30.0% |
!! | TTTGGTGTATTTTAGGAACA+AGG | - | chr5_3:61216606-61216625 | Msa0822830:CDS | 30.0% |
GGCTAAAAAGAAAGAGAAAA+AGG | - | chr5_3:61216627-61216646 | Msa0822830:CDS | 30.0% | |
GGATATAGATGGAGAAAATA+TGG | - | chr5_3:61216706-61216725 | Msa0822830:CDS | 30.0% | |
GAAATATGGAATAGGATTAG+AGG | + | chr5_3:61216979-61216998 | None:intergenic | 30.0% | |
TATGTTGTCATCACAATTGA+TGG | + | chr5_3:61217127-61217146 | None:intergenic | 30.0% | |
ATTGTGATGACAACATATGA+AGG | - | chr5_3:61217130-61217149 | Msa0822830:intron | 30.0% | |
GAAACTGAGAAAAGAAATCT+TGG | + | chr5_3:61217270-61217289 | None:intergenic | 30.0% | |
GGATATACTACAGATTCAAA+TGG | + | chr5_3:61217487-61217506 | None:intergenic | 30.0% | |
AGGTATACAGAACAAGTTAA+GGG | + | chr5_3:61217544-61217563 | None:intergenic | 30.0% | |
TAGGTATACAGAACAAGTTA+AGG | + | chr5_3:61217545-61217564 | None:intergenic | 30.0% | |
! | AAAGTTGTAAATTTGAGGTG+AGG | - | chr5_3:61217726-61217745 | Msa0822830:five_prime_UTR | 30.0% |
ATCATGATTCTCATTAGCCA+TGG | + | chr5_3:61215763-61215782 | None:intergenic | 35.0% | |
TTGAGTTCATCTTGATGGAA+AGG | + | chr5_3:61215786-61215805 | None:intergenic | 35.0% | |
AGTGATTGAGTTCATCTTGA+TGG | + | chr5_3:61215791-61215810 | None:intergenic | 35.0% | |
TGACTATTTACAAGGTTCCA+TGG | - | chr5_3:61215875-61215894 | Msa0822830:three_prime_UTR | 35.0% | |
! | CAAGTCAAAGGCTTTTGATA+GGG | + | chr5_3:61215910-61215929 | None:intergenic | 35.0% |
! | ACAAGTCAAAGGCTTTTGAT+AGG | + | chr5_3:61215911-61215930 | None:intergenic | 35.0% |
TGAAGAACAAGACAAGTCAA+AGG | + | chr5_3:61215922-61215941 | None:intergenic | 35.0% | |
! | CTTTGTGTTGTTGTCATCAA+TGG | + | chr5_3:61215961-61215980 | None:intergenic | 35.0% |
AACACAAAGAAATCTAGTGC+AGG | - | chr5_3:61215972-61215991 | Msa0822830:CDS | 35.0% | |
GGAGATTTATCATCACTAGT+AGG | - | chr5_3:61215993-61216012 | Msa0822830:CDS | 35.0% | |
!! | GAGGATGATTCTGAAGATTT+TGG | + | chr5_3:61216032-61216051 | None:intergenic | 35.0% |
TATCACAGCTTCATTAGATG+AGG | + | chr5_3:61216051-61216070 | None:intergenic | 35.0% | |
ATCATGAAGAAAAAGGGACA+AGG | + | chr5_3:61216184-61216203 | None:intergenic | 35.0% | |
CCTAGCTACTCATGAATTAA+AGG | + | chr5_3:61216277-61216296 | None:intergenic | 35.0% | |
CCTTTAATTCATGAGTAGCT+AGG | - | chr5_3:61216274-61216293 | Msa0822830:CDS | 35.0% | |
AGAAAAAGGTAAAAGAGCCA+AGG | - | chr5_3:61216641-61216660 | Msa0822830:CDS | 35.0% | |
TTAGTCAAGAATGCAAACCT+TGG | + | chr5_3:61216661-61216680 | None:intergenic | 35.0% | |
ACCTTGAAGATGGATATAGA+TGG | - | chr5_3:61216695-61216714 | Msa0822830:CDS | 35.0% | |
TCCATCTATATCCATCTTCA+AGG | + | chr5_3:61216699-61216718 | None:intergenic | 35.0% | |
AGAAGTGAAAAACCTAGATC+AGG | + | chr5_3:61216878-61216897 | None:intergenic | 35.0% | |
TCACTTCTCTTGAAAATCTG+AGG | - | chr5_3:61216890-61216909 | Msa0822830:intron | 35.0% | |
! | AGAAGTGCATTGTGAAGAAA+AGG | - | chr5_3:61217080-61217099 | Msa0822830:intron | 35.0% |
GAAGTGCATTGTGAAGAAAA+GGG | - | chr5_3:61217081-61217100 | Msa0822830:intron | 35.0% | |
! | TCATCACAATTGATGGATCT+TGG | + | chr5_3:61217120-61217139 | None:intergenic | 35.0% |
CATTGAAGTGGAAGCAAATA+GGG | + | chr5_3:61217227-61217246 | None:intergenic | 35.0% | |
CTATTTGCTTCCACTTCAAT+GGG | - | chr5_3:61217226-61217245 | Msa0822830:CDS | 35.0% | |
!! | GGAAAATTTGTTGATCGCTT+TGG | + | chr5_3:61217306-61217325 | None:intergenic | 35.0% |
TTACTACCATCATCATTTCC+TGG | - | chr5_3:61217418-61217437 | Msa0822830:CDS | 35.0% | |
! | TGTTTTCCAGGAAATGATGA+TGG | + | chr5_3:61217427-61217446 | None:intergenic | 35.0% |
! | TAAATTTGAGGTGAGGATGA+TGG | - | chr5_3:61217733-61217752 | Msa0822830:five_prime_UTR | 35.0% |
ATCATGATTCTCATTAGCCA+TGG | + | chr5_3:61215763-61215782 | None:intergenic | 35.0% | |
TTGAGTTCATCTTGATGGAA+AGG | + | chr5_3:61215786-61215805 | None:intergenic | 35.0% | |
AGTGATTGAGTTCATCTTGA+TGG | + | chr5_3:61215791-61215810 | None:intergenic | 35.0% | |
TGACTATTTACAAGGTTCCA+TGG | - | chr5_3:61215875-61215894 | Msa0822830:three_prime_UTR | 35.0% | |
! | CAAGTCAAAGGCTTTTGATA+GGG | + | chr5_3:61215910-61215929 | None:intergenic | 35.0% |
! | ACAAGTCAAAGGCTTTTGAT+AGG | + | chr5_3:61215911-61215930 | None:intergenic | 35.0% |
TGAAGAACAAGACAAGTCAA+AGG | + | chr5_3:61215922-61215941 | None:intergenic | 35.0% | |
! | CTTTGTGTTGTTGTCATCAA+TGG | + | chr5_3:61215961-61215980 | None:intergenic | 35.0% |
AACACAAAGAAATCTAGTGC+AGG | - | chr5_3:61215972-61215991 | Msa0822830:CDS | 35.0% | |
GGAGATTTATCATCACTAGT+AGG | - | chr5_3:61215993-61216012 | Msa0822830:CDS | 35.0% | |
!! | GAGGATGATTCTGAAGATTT+TGG | + | chr5_3:61216032-61216051 | None:intergenic | 35.0% |
TATCACAGCTTCATTAGATG+AGG | + | chr5_3:61216051-61216070 | None:intergenic | 35.0% | |
ATCATGAAGAAAAAGGGACA+AGG | + | chr5_3:61216184-61216203 | None:intergenic | 35.0% | |
CCTAGCTACTCATGAATTAA+AGG | + | chr5_3:61216277-61216296 | None:intergenic | 35.0% | |
CCTTTAATTCATGAGTAGCT+AGG | - | chr5_3:61216274-61216293 | Msa0822830:CDS | 35.0% | |
AGAAAAAGGTAAAAGAGCCA+AGG | - | chr5_3:61216641-61216660 | Msa0822830:CDS | 35.0% | |
TTAGTCAAGAATGCAAACCT+TGG | + | chr5_3:61216661-61216680 | None:intergenic | 35.0% | |
ACCTTGAAGATGGATATAGA+TGG | - | chr5_3:61216695-61216714 | Msa0822830:CDS | 35.0% | |
TCCATCTATATCCATCTTCA+AGG | + | chr5_3:61216699-61216718 | None:intergenic | 35.0% | |
AGAAGTGAAAAACCTAGATC+AGG | + | chr5_3:61216878-61216897 | None:intergenic | 35.0% | |
TCACTTCTCTTGAAAATCTG+AGG | - | chr5_3:61216890-61216909 | Msa0822830:intron | 35.0% | |
! | AGAAGTGCATTGTGAAGAAA+AGG | - | chr5_3:61217080-61217099 | Msa0822830:intron | 35.0% |
GAAGTGCATTGTGAAGAAAA+GGG | - | chr5_3:61217081-61217100 | Msa0822830:intron | 35.0% | |
! | TCATCACAATTGATGGATCT+TGG | + | chr5_3:61217120-61217139 | None:intergenic | 35.0% |
CATTGAAGTGGAAGCAAATA+GGG | + | chr5_3:61217227-61217246 | None:intergenic | 35.0% | |
CTATTTGCTTCCACTTCAAT+GGG | - | chr5_3:61217226-61217245 | Msa0822830:CDS | 35.0% | |
!! | GGAAAATTTGTTGATCGCTT+TGG | + | chr5_3:61217306-61217325 | None:intergenic | 35.0% |
TTACTACCATCATCATTTCC+TGG | - | chr5_3:61217418-61217437 | Msa0822830:CDS | 35.0% | |
! | TGTTTTCCAGGAAATGATGA+TGG | + | chr5_3:61217427-61217446 | None:intergenic | 35.0% |
! | TAAATTTGAGGTGAGGATGA+TGG | - | chr5_3:61217733-61217752 | Msa0822830:five_prime_UTR | 35.0% |
GAGGAGAGAAGGTTGAATTA+TGG | + | chr5_3:61215719-61215738 | None:intergenic | 40.0% | |
! | ACCTTTTCTTCTCTCTTCCA+TGG | - | chr5_3:61215743-61215762 | Msa0822830:three_prime_UTR | 40.0% |
TGGCTGCTTATCTTTCTTGT+TGG | + | chr5_3:61216087-61216106 | None:intergenic | 40.0% | |
! | CCATCTTCACACCCTAATTT+TGG | + | chr5_3:61216107-61216126 | None:intergenic | 40.0% |
CCAAAATTAGGGTGTGAAGA+TGG | - | chr5_3:61216104-61216123 | Msa0822830:CDS | 40.0% | |
TAGATCAATGGAGGGTAAGA+AGG | - | chr5_3:61216211-61216230 | Msa0822830:CDS | 40.0% | |
AAGTACAGTGGTGTGAATGT+AGG | - | chr5_3:61216443-61216462 | Msa0822830:intron | 40.0% | |
GAGATTGATCACCTTGAAGA+TGG | - | chr5_3:61216685-61216704 | Msa0822830:CDS | 40.0% | |
! | TGATGATGACAACAACATGG+AGG | + | chr5_3:61217200-61217219 | None:intergenic | 40.0% |
! | TGGTGATGATGACAACAACA+TGG | + | chr5_3:61217203-61217222 | None:intergenic | 40.0% |
CCATTGAAGTGGAAGCAAAT+AGG | + | chr5_3:61217228-61217247 | None:intergenic | 40.0% | |
CCTATTTGCTTCCACTTCAA+TGG | - | chr5_3:61217225-61217244 | Msa0822830:CDS | 40.0% | |
TGATCGCTTTGGCTATAAGT+TGG | + | chr5_3:61217295-61217314 | None:intergenic | 40.0% | |
! | GATGAGGTTGTGGAAGATTT+TGG | + | chr5_3:61217330-61217349 | None:intergenic | 40.0% |
GAGGAGAGAAGGTTGAATTA+TGG | + | chr5_3:61215719-61215738 | None:intergenic | 40.0% | |
! | ACCTTTTCTTCTCTCTTCCA+TGG | - | chr5_3:61215743-61215762 | Msa0822830:three_prime_UTR | 40.0% |
TGGCTGCTTATCTTTCTTGT+TGG | + | chr5_3:61216087-61216106 | None:intergenic | 40.0% | |
! | CCATCTTCACACCCTAATTT+TGG | + | chr5_3:61216107-61216126 | None:intergenic | 40.0% |
CCAAAATTAGGGTGTGAAGA+TGG | - | chr5_3:61216104-61216123 | Msa0822830:CDS | 40.0% | |
TAGATCAATGGAGGGTAAGA+AGG | - | chr5_3:61216211-61216230 | Msa0822830:CDS | 40.0% | |
AAGTACAGTGGTGTGAATGT+AGG | - | chr5_3:61216443-61216462 | Msa0822830:intron | 40.0% | |
GAGATTGATCACCTTGAAGA+TGG | - | chr5_3:61216685-61216704 | Msa0822830:CDS | 40.0% | |
! | TGATGATGACAACAACATGG+AGG | + | chr5_3:61217200-61217219 | None:intergenic | 40.0% |
! | TGGTGATGATGACAACAACA+TGG | + | chr5_3:61217203-61217222 | None:intergenic | 40.0% |
CCATTGAAGTGGAAGCAAAT+AGG | + | chr5_3:61217228-61217247 | None:intergenic | 40.0% | |
CCTATTTGCTTCCACTTCAA+TGG | - | chr5_3:61217225-61217244 | Msa0822830:CDS | 40.0% | |
TGATCGCTTTGGCTATAAGT+TGG | + | chr5_3:61217295-61217314 | None:intergenic | 40.0% | |
! | GATGAGGTTGTGGAAGATTT+TGG | + | chr5_3:61217330-61217349 | None:intergenic | 40.0% |
! | GAGGAGTGTGTAAAAGTAGG+AGG | - | chr5_3:61215565-61215584 | Msa0822830:three_prime_UTR | 45.0% |
AAAAGGTGAGTGAGGAGAGA+AGG | + | chr5_3:61215730-61215749 | None:intergenic | 45.0% | |
GAGAGAAGAAAAGGTGAGTG+AGG | + | chr5_3:61215738-61215757 | None:intergenic | 45.0% | |
GCCATGGAAGAGAGAAGAAA+AGG | + | chr5_3:61215747-61215766 | None:intergenic | 45.0% | |
!! | TGATAGGGTGTTGTAGTCCA+TGG | + | chr5_3:61215895-61215914 | None:intergenic | 45.0% |
AGGGACAAGGAAAGAAGAAG+AGG | + | chr5_3:61216171-61216190 | None:intergenic | 45.0% | |
TCAAGAATAGTCCGTACCCA+AGG | - | chr5_3:61216740-61216759 | Msa0822830:intron | 45.0% | |
CTCAGAAACGTTCCTGATCT+AGG | - | chr5_3:61216863-61216882 | Msa0822830:intron | 45.0% | |
GTGCATTGTGAAGAAAAGGG+TGG | - | chr5_3:61217084-61217103 | Msa0822830:intron | 45.0% | |
GAAGTGGAAGCAAATAGGGA+TGG | + | chr5_3:61217223-61217242 | None:intergenic | 45.0% | |
TGCTTCCACTTCAATGGGAT+TGG | - | chr5_3:61217231-61217250 | Msa0822830:CDS | 45.0% | |
TTGCTCCAATCCCATTGAAG+TGG | + | chr5_3:61217239-61217258 | None:intergenic | 45.0% | |
! | GAGGTTGTGGAAGATTTTGG+TGG | + | chr5_3:61217327-61217346 | None:intergenic | 45.0% |
! | TGTTGTTGCTGTTGCTGATG+AGG | + | chr5_3:61217346-61217365 | None:intergenic | 45.0% |
TTCCAACTTCGTCGTGACTA+TGG | - | chr5_3:61217382-61217401 | Msa0822830:CDS | 45.0% | |
AACCATAGTCACGACGAAGT+TGG | + | chr5_3:61217387-61217406 | None:intergenic | 45.0% | |
!!! | GTTCAAGGCTCTTGTTTTCC+AGG | + | chr5_3:61217439-61217458 | None:intergenic | 45.0% |
! | GGTGAGGATGATGGTTTGAA+AGG | - | chr5_3:61217742-61217761 | Msa0822830:five_prime_UTR | 45.0% |
! | GAGGAGTGTGTAAAAGTAGG+AGG | - | chr5_3:61215565-61215584 | Msa0822830:three_prime_UTR | 45.0% |
AAAAGGTGAGTGAGGAGAGA+AGG | + | chr5_3:61215730-61215749 | None:intergenic | 45.0% | |
GAGAGAAGAAAAGGTGAGTG+AGG | + | chr5_3:61215738-61215757 | None:intergenic | 45.0% | |
GCCATGGAAGAGAGAAGAAA+AGG | + | chr5_3:61215747-61215766 | None:intergenic | 45.0% | |
!! | TGATAGGGTGTTGTAGTCCA+TGG | + | chr5_3:61215895-61215914 | None:intergenic | 45.0% |
AGGGACAAGGAAAGAAGAAG+AGG | + | chr5_3:61216171-61216190 | None:intergenic | 45.0% | |
TCAAGAATAGTCCGTACCCA+AGG | - | chr5_3:61216740-61216759 | Msa0822830:intron | 45.0% | |
CTCAGAAACGTTCCTGATCT+AGG | - | chr5_3:61216863-61216882 | Msa0822830:intron | 45.0% | |
GTGCATTGTGAAGAAAAGGG+TGG | - | chr5_3:61217084-61217103 | Msa0822830:intron | 45.0% | |
GAAGTGGAAGCAAATAGGGA+TGG | + | chr5_3:61217223-61217242 | None:intergenic | 45.0% | |
TGCTTCCACTTCAATGGGAT+TGG | - | chr5_3:61217231-61217250 | Msa0822830:CDS | 45.0% | |
TTGCTCCAATCCCATTGAAG+TGG | + | chr5_3:61217239-61217258 | None:intergenic | 45.0% | |
! | GAGGTTGTGGAAGATTTTGG+TGG | + | chr5_3:61217327-61217346 | None:intergenic | 45.0% |
! | TGTTGTTGCTGTTGCTGATG+AGG | + | chr5_3:61217346-61217365 | None:intergenic | 45.0% |
TTCCAACTTCGTCGTGACTA+TGG | - | chr5_3:61217382-61217401 | Msa0822830:CDS | 45.0% | |
AACCATAGTCACGACGAAGT+TGG | + | chr5_3:61217387-61217406 | None:intergenic | 45.0% | |
!!! | GTTCAAGGCTCTTGTTTTCC+AGG | + | chr5_3:61217439-61217458 | None:intergenic | 45.0% |
! | GGTGAGGATGATGGTTTGAA+AGG | - | chr5_3:61217742-61217761 | Msa0822830:five_prime_UTR | 45.0% |
! | CATTACCCCTGAGTGTTGCT+GGG | + | chr5_3:61217174-61217193 | None:intergenic | 50.0% |
TGCTGTTGCTGATGAGGTTG+TGG | + | chr5_3:61217340-61217359 | None:intergenic | 50.0% | |
! | GCGGATGATGATGATGCACT+TGG | - | chr5_3:61217614-61217633 | Msa0822830:five_prime_UTR | 50.0% |
! | CATTACCCCTGAGTGTTGCT+GGG | + | chr5_3:61217174-61217193 | None:intergenic | 50.0% |
TGCTGTTGCTGATGAGGTTG+TGG | + | chr5_3:61217340-61217359 | None:intergenic | 50.0% | |
! | GCGGATGATGATGATGCACT+TGG | - | chr5_3:61217614-61217633 | Msa0822830:five_prime_UTR | 50.0% |
! | TGAGTGTTGCTGGGCAGTGA+TGG | + | chr5_3:61217165-61217184 | None:intergenic | 55.0% |
ATCACTGCCCAGCAACACTC+AGG | - | chr5_3:61217164-61217183 | Msa0822830:intron | 55.0% | |
TCACTGCCCAGCAACACTCA+GGG | - | chr5_3:61217165-61217184 | Msa0822830:intron | 55.0% | |
! | GCATTACCCCTGAGTGTTGC+TGG | + | chr5_3:61217175-61217194 | None:intergenic | 55.0% |
! | TGAGTGTTGCTGGGCAGTGA+TGG | + | chr5_3:61217165-61217184 | None:intergenic | 55.0% |
ATCACTGCCCAGCAACACTC+AGG | - | chr5_3:61217164-61217183 | Msa0822830:intron | 55.0% | |
TCACTGCCCAGCAACACTCA+GGG | - | chr5_3:61217165-61217184 | Msa0822830:intron | 55.0% | |
! | GCATTACCCCTGAGTGTTGC+TGG | + | chr5_3:61217175-61217194 | None:intergenic | 55.0% |
CACTGCCCAGCAACACTCAG+GGG | - | chr5_3:61217166-61217185 | Msa0822830:intron | 60.0% | |
CACTGCCCAGCAACACTCAG+GGG | - | chr5_3:61217166-61217185 | Msa0822830:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 61215565 | 61217798 | 61215565 | ID=Msa0822830;Name=Msa0822830 |
chr5_3 | mRNA | 61215565 | 61217798 | 61215565 | ID=Msa0822830-mRNA-1;Parent=Msa0822830;Name=Msa0822830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=197|1|1|1|1|1|3|342|309 |
chr5_3 | exon | 61215565 | 61216306 | 61215565 | ID=Msa0822830-mRNA-1:exon:18869;Parent=Msa0822830-mRNA-1 |
chr5_3 | exon | 61216602 | 61216742 | 61216602 | ID=Msa0822830-mRNA-1:exon:18868;Parent=Msa0822830-mRNA-1 |
chr5_3 | exon | 61217213 | 61217798 | 61217213 | ID=Msa0822830-mRNA-1:exon:18867;Parent=Msa0822830-mRNA-1 |
chr5_3 | five_prime_UTR | 61217602 | 61217798 | 61217602 | ID=Msa0822830-mRNA-1:five_prime_utr;Parent=Msa0822830-mRNA-1 |
chr5_3 | CDS | 61217213 | 61217601 | 61217213 | ID=Msa0822830-mRNA-1:cds;Parent=Msa0822830-mRNA-1 |
chr5_3 | CDS | 61216602 | 61216742 | 61216602 | ID=Msa0822830-mRNA-1:cds;Parent=Msa0822830-mRNA-1 |
chr5_3 | CDS | 61215907 | 61216306 | 61215907 | ID=Msa0822830-mRNA-1:cds;Parent=Msa0822830-mRNA-1 |
chr5_3 | three_prime_UTR | 61215565 | 61215906 | 61215565 | ID=Msa0822830-mRNA-1:three_prime_utr;Parent=Msa0822830-mRNA-1 |
Gene Sequence |
Protein sequence |