AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0326110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0326110 MtrunA17_Chr2g0304541 96.370 551 13 1 1 551 1 544 0.0 1078
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0326110 AT2G12550.1 56.050 562 227 8 1 546 1 558 0.0 632

Find 145 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAATCATCTTCTTATT+TGG 0.145142 2_4:+35300013 None:intergenic
TGTAAATCAGAATTGGTTTC+TGG 0.155036 2_4:+35300647 None:intergenic
CAGATCCACGGCCTTCTTTA+AGG 0.187611 2_4:+35300957 None:intergenic
CTACTCACCTCAATGACTTT+TGG 0.271684 2_4:+35303687 None:intergenic
AGAAACCAATTCTGATTTAC+AGG 0.272571 2_4:-35300645 Msa0326110:intron
TACTGTCACTTCTCCTCAAC+AGG 0.299237 2_4:-35306983 Msa0326110:CDS
GGGGTGGTGGCATTTCATTC+TGG 0.301341 2_4:-35301799 Msa0326110:CDS
TACCTAATTGGGTTAGGGTT+AGG 0.307949 2_4:+35307031 None:intergenic
TCATGCTACGGGACATTAGA+TGG 0.315239 2_4:-35302104 Msa0326110:CDS
GAATTCTACCAGCACAAATA+AGG 0.341318 2_4:+35307073 None:intergenic
ACCCTAACCCTAACCCAATT+AGG 0.342476 2_4:-35307033 Msa0326110:CDS
AAGAAGTCGATTTAGAGAAT+TGG 0.355332 2_4:-35307161 Msa0326110:CDS
CTGAACGAATTGGTCACTAT+TGG 0.357481 2_4:-35300928 Msa0326110:CDS
GATCTTCAACCCCATTCATT+TGG 0.359756 2_4:+35300192 None:intergenic
GTGTTTCTGCTCTTTGATGC+AGG 0.368545 2_4:-35299943 Msa0326110:three_prime_UTR
TGTGAAGAATTTCTTACTCT+TGG 0.369609 2_4:-35299684 Msa0326110:three_prime_UTR
ACCTAATTGGGTTAGGGTTA+GGG 0.372520 2_4:+35307032 None:intergenic
CTTAAAGAAGGCCGTGGATC+TGG 0.374229 2_4:-35300956 Msa0326110:CDS
AGATCCACGGCCTTCTTTAA+GGG 0.381674 2_4:+35300958 None:intergenic
TGTTACCTGTAAATCAGAAT+TGG 0.383655 2_4:+35300640 None:intergenic
ACCATGTCAATTTGCAGTAT+TGG 0.385264 2_4:+35302138 None:intergenic
TGCAAAAGCGAAGTTTGTTC+AGG 0.395049 2_4:-35301743 Msa0326110:intron
CATAACTGAGTACCTGTCTA+TGG 0.395210 2_4:-35300057 Msa0326110:CDS
CTCATAGGCTTGCTCGTATT+AGG 0.406605 2_4:-35306930 Msa0326110:intron
AGGGATCTCATGTAAATATC+TGG 0.413535 2_4:-35299923 Msa0326110:three_prime_UTR
CTTGCCTTGATTTCTCCAAC+TGG 0.414108 2_4:+35301776 None:intergenic
TTTGATACCTAATTGGGTTA+GGG 0.418819 2_4:+35307026 None:intergenic
GAATGAACAATCAAGATGTT+GGG 0.423602 2_4:-35301157 Msa0326110:CDS
TTCATTAACCTTATTTGTGC+TGG 0.424720 2_4:-35307081 Msa0326110:CDS
CTGCAACTGCATTGGCTGAA+AGG 0.425202 2_4:-35304741 Msa0326110:CDS
TTCTTCACGTAATGAAGAAA+TGG 0.425445 2_4:+35307137 None:intergenic
TACATTTGTGCTCATTCCCT+AGG 0.425792 2_4:-35299895 Msa0326110:three_prime_UTR
TTCCTGCCCTAGCCATTTCA+AGG 0.427968 2_4:+35302061 None:intergenic
CTGTCTATGGTTGAGTCTGC+AGG 0.429526 2_4:-35300044 Msa0326110:CDS
TGCTGGAAAGCGCCTTGAAA+TGG 0.430491 2_4:-35302073 Msa0326110:CDS
GACATTCTAGACCAAATGAA+TGG 0.434790 2_4:-35300203 Msa0326110:CDS
TGCCATTGATTTCCTTGTTG+AGG 0.440595 2_4:-35301132 Msa0326110:CDS
GACATTGAAGTTAATATTGA+AGG 0.441170 2_4:-35300086 Msa0326110:CDS
CCAGGGAGCAAAAGCGGTAT+GGG 0.441248 2_4:-35300987 Msa0326110:intron
CGAATGAACAATCAAGATGT+TGG 0.443559 2_4:-35301158 Msa0326110:CDS
GCAGCAGTTGAATTCATTTG+AGG 0.444304 2_4:+35300278 None:intergenic
TGAACGAATTGGTCACTATT+GGG 0.444732 2_4:-35300927 Msa0326110:intron
AGTGACAGTAGCGAGAATCT+TGG 0.449149 2_4:+35306996 None:intergenic
ATTTGGCAGGGCAGTAATGA+TGG 0.451862 2_4:-35304504 Msa0326110:intron
AGAAGAAAGGGATGTGGAGA+TGG 0.456681 2_4:-35300159 Msa0326110:CDS
GGTTGCATATTCTCAGCCTC+AGG 0.456720 2_4:+35300299 None:intergenic
ATCACAATAAAACAGAAGAA+AGG 0.465013 2_4:-35300172 Msa0326110:CDS
CATAGACAGGTACTCAGTTA+TGG 0.465982 2_4:+35300058 None:intergenic
TATCAGTTTATGTAAATAGC+AGG 0.466133 2_4:-35299984 Msa0326110:three_prime_UTR
GGCATTTCATTCTGGCCAGT+TGG 0.467585 2_4:-35301791 Msa0326110:CDS
TTGAGACTAGAGCTGCTTGA+AGG 0.470120 2_4:-35301820 Msa0326110:CDS
ACATTCTAGACCAAATGAAT+GGG 0.470306 2_4:-35300202 Msa0326110:CDS
ACAAGTGATAAGGCCTCATC+TGG 0.470489 2_4:+35301224 None:intergenic
TTGAGGAACAAAGCTCTCAT+AGG 0.473510 2_4:-35306945 Msa0326110:CDS
TCCAGGGAGCAAAAGCGGTA+TGG 0.475210 2_4:-35300988 Msa0326110:intron
GAAGTGAGGATTATCGCAAT+TGG 0.482473 2_4:+35307101 None:intergenic
GGACTGATGCTTCATGCAAA+GGG 0.483061 2_4:-35304482 Msa0326110:CDS
AAGATAGCAGGAACATGGTC+AGG 0.484618 2_4:-35307192 Msa0326110:CDS
TGATTTCCTTGTTGAGGAGA+AGG 0.485527 2_4:-35301126 Msa0326110:CDS
TCACAATAAAACAGAAGAAA+GGG 0.485998 2_4:-35300171 Msa0326110:CDS
TCTGGAGAGACTGAACGAAT+TGG 0.486099 2_4:-35300938 Msa0326110:CDS
CAGGGCAGCTGCAACTGCAT+TGG 0.489381 2_4:-35304749 Msa0326110:CDS
CGCCTTGAAATGGCTAGGGC+AGG 0.494912 2_4:-35302063 Msa0326110:CDS
TGTTTCTGCTCTTTGATGCA+GGG 0.497759 2_4:-35299942 Msa0326110:three_prime_UTR
CTTATCACTTGTTATGAGCA+TGG 0.500815 2_4:-35301213 Msa0326110:CDS
CATGCTCATAACAAGTGATA+AGG 0.501636 2_4:+35301214 None:intergenic
AGAAAGGGATGTGGAGATGG+AGG 0.502336 2_4:-35300156 Msa0326110:CDS
TTCAATGTCATAATCAGTAA+AGG 0.506090 2_4:+35300100 None:intergenic
ATAACTCACAGTGCAACCTC+TGG 0.506415 2_4:+35301979 None:intergenic
GCAGGAATTGAACGTGCTCA+TGG 0.514358 2_4:-35302045 Msa0326110:CDS
CTCTCTGCAGATATAGCTAA+AGG 0.515262 2_4:-35300128 Msa0326110:CDS
ATTAGATGGTTATCAGATGC+TGG 0.515816 2_4:-35302090 Msa0326110:CDS
ACATTGAAGTTAATATTGAA+GGG 0.516059 2_4:-35300085 Msa0326110:CDS
TGAGCATGGGCTACACTCAA+AGG 0.519721 2_4:-35301199 Msa0326110:CDS
ATCTCATGTAAATATCTGGA+TGG 0.519920 2_4:-35299919 Msa0326110:three_prime_UTR
CTGGCCAGTTGGAGAAATCA+AGG 0.520361 2_4:-35301780 Msa0326110:CDS
TTATCACTTGTTATGAGCAT+GGG 0.521383 2_4:-35301212 Msa0326110:CDS
GATCCACGGCCTTCTTTAAG+GGG 0.523385 2_4:+35300959 None:intergenic
GCTGAGACTGTTCTCAAAGT+AGG 0.527826 2_4:-35299734 Msa0326110:three_prime_UTR
CTCCTCAACAAGGAAATCAA+TGG 0.528274 2_4:+35301130 None:intergenic
CTAATTATTATAGAAACCCT+AGG 0.530124 2_4:+35299878 None:intergenic
ACATTTGTGCTCATTCCCTA+GGG 0.532330 2_4:-35299894 Msa0326110:three_prime_UTR
CTTACATCGCAGGTTTGAGA+AGG 0.534464 2_4:-35300738 Msa0326110:intron
TTGTGCTGGTAGAATTCTCA+AGG 0.536220 2_4:-35307067 Msa0326110:CDS
TGAGACTAGAGCTGCTTGAA+GGG 0.538710 2_4:-35301819 Msa0326110:CDS
AAATGATACTCAGAAGGCAT+TGG 0.543068 2_4:-35300684 Msa0326110:CDS
GAGCATGGGCTACACTCAAA+GGG 0.544631 2_4:-35301198 Msa0326110:CDS
TTAAGATCGAGTCAAGGAAA+AGG 0.546564 2_4:-35300551 Msa0326110:CDS
AGAGCTGCTTGAAGGGGTGG+TGG 0.548955 2_4:-35301812 Msa0326110:CDS
ATGGCGAAATTGAAGATAGC+AGG 0.549751 2_4:-35307204 Msa0326110:CDS
GGGTCAGTCTCTTGTTGTTG+AGG 0.549824 2_4:-35306962 Msa0326110:CDS
AGTGGACAGAAAGTACGCTT+AGG 0.551971 2_4:-35304664 Msa0326110:CDS
TACTGCAAATTGACATGGTA+TGG 0.553370 2_4:-35302134 Msa0326110:CDS
TAGCAGGATTATAAAGACAA+TGG 0.563927 2_4:-35299968 Msa0326110:three_prime_UTR
CAGGAATTGAACGTGCTCAT+GGG 0.566377 2_4:-35302044 Msa0326110:CDS
TTGTGATCCAAAAGTCATTG+AGG 0.569044 2_4:-35303694 Msa0326110:intron
TATGGTGCTACTTCATGCTA+CGG 0.569586 2_4:-35302116 Msa0326110:CDS
TGAAGTGCTTACCATGGGAG+AGG 0.572323 2_4:-35304420 Msa0326110:intron
AGAATTTCTTACTCTTGGTG+TGG 0.573371 2_4:-35299679 Msa0326110:three_prime_UTR
TTTGGCAGGGCAGTAATGAT+GGG 0.575905 2_4:-35304503 Msa0326110:intron
TTCATTCCAGGGAGCAAAAG+CGG 0.576218 2_4:-35300993 Msa0326110:intron
TAAAACAGAAGAAAGGGATG+TGG 0.577129 2_4:-35300165 Msa0326110:CDS
CTCCGCCTCAGACTCTTACA+AGG 0.581292 2_4:-35302012 Msa0326110:CDS
TCTATGTTAAAGTCTTCAAG+AGG 0.581402 2_4:+35304700 None:intergenic
CGAGTGGAGTGATCGCAACA+TGG 0.585539 2_4:-35307223 Msa0326110:exon
ATGGTGCTACTTCATGCTAC+GGG 0.586062 2_4:-35302115 Msa0326110:CDS
CTGCAGACTCAACCATAGAC+AGG 0.588061 2_4:+35300045 None:intergenic
ACTAGAGCTGCTTGAAGGGG+TGG 0.592346 2_4:-35301815 Msa0326110:CDS
GAAAGCGCCTTGAAATGGCT+AGG 0.596531 2_4:-35302068 Msa0326110:CDS
AATTGAACGTGCTCATGGGA+AGG 0.600472 2_4:-35302040 Msa0326110:CDS
GGGACTGATGCTTCATGCAA+AGG 0.602701 2_4:-35304483 Msa0326110:CDS
AAAGCGCCTTGAAATGGCTA+GGG 0.603487 2_4:-35302067 Msa0326110:CDS
AAATGAAAATGATACTCAGA+AGG 0.604629 2_4:-35300690 Msa0326110:CDS
CAAATAAGGTTAATGAAGTG+AGG 0.605620 2_4:+35307087 None:intergenic
CATTGAAGTTAATATTGAAG+GGG 0.605658 2_4:-35300084 Msa0326110:CDS
TCTCATGTAAATATCTGGAT+GGG 0.609184 2_4:-35299918 Msa0326110:three_prime_UTR
GAGACTAGAGCTGCTTGAAG+GGG 0.611311 2_4:-35301818 Msa0326110:CDS
TGCACTTGAAGTGCTTACCA+TGG 0.613852 2_4:-35304426 Msa0326110:CDS
TCTTTGCCTTCTCCTCAACA+AGG 0.617660 2_4:+35301120 None:intergenic
GAGACTGTTCTCAAAGTAGG+TGG 0.619164 2_4:-35299731 Msa0326110:three_prime_UTR
ATCAATCAAACAGAATCGAG+TGG 0.619333 2_4:-35307239 Msa0326110:five_prime_UTR
ATAGAAGTTGAAGATCAAAG+TGG 0.620042 2_4:-35304682 Msa0326110:CDS
GTTCAGTCTCTCCAGATCCA+CGG 0.623737 2_4:+35300945 None:intergenic
GCACTTGAAGTGCTTACCAT+GGG 0.624029 2_4:-35304425 Msa0326110:CDS
ACAAGAGACTGACCCTGTTG+AGG 0.629157 2_4:+35306970 None:intergenic
GACCACCTTGTAAGAGTCTG+AGG 0.631446 2_4:+35302007 None:intergenic
AATGAACAATCAAGATGTTG+GGG 0.637210 2_4:-35301156 Msa0326110:CDS
TAAGGAACTAACCTCTCCCA+TGG 0.639510 2_4:+35304409 None:intergenic
TCCAATACTGCAAATTGACA+TGG 0.640785 2_4:-35302139 Msa0326110:CDS
AATTGAAGATAGCAGGAACA+TGG 0.644813 2_4:-35307197 Msa0326110:CDS
ATCCACGGCCTTCTTTAAGG+GGG 0.652056 2_4:+35300960 None:intergenic
AAGACTGACAGCACAACCTG+AGG 0.658542 2_4:-35300315 Msa0326110:CDS
CAGGGAGCAAAAGCGGTATG+GGG 0.658721 2_4:-35300986 Msa0326110:CDS
ACAAGGTGGTCGCTATCCAG+AGG 0.659802 2_4:-35301995 Msa0326110:CDS
ACAGCTGCAAGTGCCAGATG+AGG 0.661882 2_4:-35301237 Msa0326110:intron
TAATTATTATAGAAACCCTA+GGG 0.662722 2_4:+35299879 None:intergenic
CGCCTCAGACTCTTACAAGG+TGG 0.663380 2_4:-35302009 Msa0326110:CDS
TAAAGGTTAAGATCGAGTCA+AGG 0.665127 2_4:-35300557 Msa0326110:intron
TTGGCTGAAAGGCATGCAGA+TGG 0.670570 2_4:-35304730 Msa0326110:CDS
CATTCTAGACCAAATGAATG+GGG 0.681680 2_4:-35300201 Msa0326110:CDS
GACTGATGCTTCATGCAAAG+GGG 0.691968 2_4:-35304481 Msa0326110:CDS
CACCTTGTAAGAGTCTGAGG+CGG 0.705300 2_4:+35302010 None:intergenic
TAGGATCAGAGATTGATCAG+AGG 0.717978 2_4:-35304645 Msa0326110:intron
ATGAACAATCAAGATGTTGG+GGG 0.720357 2_4:-35301155 Msa0326110:CDS
ACTGTCACTTCTCCTCAACA+GGG 0.732804 2_4:-35306982 Msa0326110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAGATAATTATTTTAATA+AGG + chr2_4:35302567-35302586 None:intergenic 10.0%
!! TTATAACCAAAATAAATAAT+TGG + chr2_4:35303342-35303361 None:intergenic 10.0%
!!! TATAATTTTCTAACTTTTTT+AGG + chr2_4:35303681-35303700 None:intergenic 10.0%
!! TAAAAAAGTTAGAAAATTAT+AGG - chr2_4:35303680-35303699 Msa0326110:intron 10.0%
!! ATTAAAAGTAGATTAATTAT+CGG - chr2_4:35305063-35305082 Msa0326110:intron 10.0%
!!! TTCCTTTTTAATTATGTTTA+TGG - chr2_4:35300089-35300108 Msa0326110:CDS 15.0%
!! TCATAGTTAATTATTAACAA+CGG + chr2_4:35300120-35300139 None:intergenic 15.0%
!! AAAATAATGTTAGATAGTTA+GGG - chr2_4:35300322-35300341 Msa0326110:CDS 15.0%
!!! GATTAAAGACTTTTTATTTT+AGG + chr2_4:35301040-35301059 None:intergenic 15.0%
!!! TATTTTGAAATAATTATCCT+AGG - chr2_4:35301132-35301151 Msa0326110:CDS 15.0%
!!! TTTTATATGCAATTTTGTTT+CGG - chr2_4:35301521-35301540 Msa0326110:intron 15.0%
!! AAATATGTATTTATGCTTAA+AGG + chr2_4:35301772-35301791 None:intergenic 15.0%
!!! TTATCATATCCTATAATTTT+GGG - chr2_4:35302046-35302065 Msa0326110:CDS 15.0%
!!! TTTAAGTTAATGCTTTTATT+AGG - chr2_4:35302718-35302737 Msa0326110:intron 15.0%
!!! TTAAGTTAATGCTTTTATTA+GGG - chr2_4:35302719-35302738 Msa0326110:intron 15.0%
!!! AATAAGAGTTTTACAAATTT+TGG - chr2_4:35302800-35302819 Msa0326110:intron 15.0%
!!! GTTATTTTTGATACCTAATT+GGG + chr2_4:35299938-35299957 None:intergenic 20.0%
!!! AGTTATTTTTGATACCTAAT+TGG + chr2_4:35299939-35299958 None:intergenic 20.0%
!! TAAAAGAGAGATAAATATTG+TGG + chr2_4:35300054-35300073 None:intergenic 20.0%
!! CACCATAAACATAATTAAAA+AGG + chr2_4:35300094-35300113 None:intergenic 20.0%
!! CTGAATTATCAAATTATTAG+CGG + chr2_4:35300174-35300193 None:intergenic 20.0%
!!! TATTTTCTCAAATACATGTT+TGG + chr2_4:35300308-35300327 None:intergenic 20.0%
!! GAAAATAATGTTAGATAGTT+AGG - chr2_4:35300321-35300340 Msa0326110:CDS 20.0%
!!! ATTTTAATGTTAGGTAGTTT+GGG - chr2_4:35300352-35300371 Msa0326110:CDS 20.0%
!!! AATTGGTGATTTTTTCAAAT+CGG - chr2_4:35301186-35301205 Msa0326110:CDS 20.0%
!!! CAAATACTAATTTTATCCTT+CGG - chr2_4:35301389-35301408 Msa0326110:intron 20.0%
!! CAATTGAATAAACAAAGAAA+TGG + chr2_4:35301447-35301466 None:intergenic 20.0%
!!! CATTTCTTTGTTTATTCAAT+TGG - chr2_4:35301445-35301464 Msa0326110:intron 20.0%
!! TTTCATGTAATTATGCTTAA+AGG + chr2_4:35301711-35301730 None:intergenic 20.0%
!!! TTTTTCTCAATAAAACAACT+AGG + chr2_4:35301904-35301923 None:intergenic 20.0%
!!! AGTTGTTTTATTGAGAAAAA+TGG - chr2_4:35301904-35301923 Msa0326110:intron 20.0%
!! AGAAAAATGGATATTTGATT+TGG - chr2_4:35301917-35301936 Msa0326110:intron 20.0%
!!! CTTATCATATCCTATAATTT+TGG - chr2_4:35302045-35302064 Msa0326110:CDS 20.0%
!! TAATGATAAATCATGAAGAA+AGG - chr2_4:35302109-35302128 Msa0326110:CDS 20.0%
!!! AATTATTTTTTATCAGTGTG+AGG - chr2_4:35302369-35302388 Msa0326110:intron 20.0%
!!! ATTATTTTTTATCAGTGTGA+GGG - chr2_4:35302370-35302389 Msa0326110:intron 20.0%
!! TTATTGTTATAAGGAAAGAT+AGG + chr2_4:35302785-35302804 None:intergenic 20.0%
!! GTAAAACTCTTATTGTTATA+AGG + chr2_4:35302794-35302813 None:intergenic 20.0%
!!! ACATGGAATTTTTCAATTAA+TGG + chr2_4:35303211-35303230 None:intergenic 20.0%
!!! CAATTTTTATTGCAAAGAAT+TGG - chr2_4:35303411-35303430 Msa0326110:intron 20.0%
!!! TTTTAGGTTAAACGTTTTTT+GGG + chr2_4:35303665-35303684 None:intergenic 20.0%
!!! TTTTTAGGTTAAACGTTTTT+TGG + chr2_4:35303666-35303685 None:intergenic 20.0%
!!! AAGTTAAAATTGTTTCTTCA+GGG + chr2_4:35303716-35303735 None:intergenic 20.0%
!!! TAAGTTAAAATTGTTTCTTC+AGG + chr2_4:35303717-35303736 None:intergenic 20.0%
!! CTAAAAAAGAAAATTCCAAT+GGG - chr2_4:35303753-35303772 Msa0326110:intron 20.0%
!! ACACGAAATATATAGAATAA+AGG - chr2_4:35303844-35303863 Msa0326110:intron 20.0%
!! CACGAAATATATAGAATAAA+GGG - chr2_4:35303845-35303864 Msa0326110:intron 20.0%
!! ACGAAATATATAGAATAAAG+GGG - chr2_4:35303846-35303865 Msa0326110:intron 20.0%
!!! CTTTTAAGATGATTTTCTAT+AGG - chr2_4:35304243-35304262 Msa0326110:intron 20.0%
!! ACCTTTGACAAAAAAATTTA+AGG - chr2_4:35304322-35304341 Msa0326110:intron 20.0%
!!! TCCTTAAATTTTTTTGTCAA+AGG + chr2_4:35304326-35304345 None:intergenic 20.0%
!! TCAAATGAGTTCTTATATTT+AGG + chr2_4:35304381-35304400 None:intergenic 20.0%
!! ATGTATCTAGTAATTTGAAA+AGG + chr2_4:35304431-35304450 None:intergenic 20.0%
!! TCACTCTTAATAAAAAAAGT+TGG + chr2_4:35304600-35304619 None:intergenic 20.0%
!! AATATAAAAGGTAGCAAAAT+TGG + chr2_4:35305418-35305437 None:intergenic 20.0%
!! TAAAAAGAAGAGATGAAATT+AGG - chr2_4:35305882-35305901 Msa0326110:intron 20.0%
!!! ACTTTTCATTTTCTTTATCT+CGG - chr2_4:35305928-35305947 Msa0326110:intron 20.0%
!! ACTTACATTTATCAACATAA+AGG - chr2_4:35306381-35306400 Msa0326110:intron 20.0%
!! AATTGAAAAAATTGTGCAAA+TGG - chr2_4:35306456-35306475 Msa0326110:intron 20.0%
!! ATTGAAAAAATTGTGCAAAT+GGG - chr2_4:35306457-35306476 Msa0326110:intron 20.0%
!!! AATTAACATTTTCTGGTAAA+GGG + chr2_4:35306730-35306749 None:intergenic 20.0%
!! ACATTGAAGTTAATATTGAA+GGG - chr2_4:35306870-35306889 Msa0326110:intron 20.0%
!! TAATTATTATAGAAACCCTA+GGG + chr2_4:35307079-35307098 None:intergenic 20.0%
! GATTAATCATTTATGAAGCA+CGG + chr2_4:35300252-35300271 None:intergenic 25.0%
! GCTTCATAAATGATTAATCT+CGG - chr2_4:35300253-35300272 Msa0326110:CDS 25.0%
! TCAAATACATGTTTGGAAAA+GGG + chr2_4:35300301-35300320 None:intergenic 25.0%
!!! GGAATTACCATTTTAATGTT+AGG - chr2_4:35300343-35300362 Msa0326110:CDS 25.0%
! CAAACTACCTAACATTAAAA+TGG + chr2_4:35300353-35300372 None:intergenic 25.0%
!!! CATTTTAATGTTAGGTAGTT+TGG - chr2_4:35300351-35300370 Msa0326110:CDS 25.0%
! TTAACTATGATTATGAAGCA+TGG - chr2_4:35300417-35300436 Msa0326110:intron 25.0%
! CTTCATAGATTGATTAATCT+CGG - chr2_4:35300650-35300669 Msa0326110:CDS 25.0%
! AAAAATACATGGATGGAAAA+GGG + chr2_4:35300698-35300717 None:intergenic 25.0%
! AAAAAATACATGGATGGAAA+AGG + chr2_4:35300699-35300718 None:intergenic 25.0%
!! ATGATAGATGTTGATTAATC+TGG - chr2_4:35300785-35300804 Msa0326110:intron 25.0%
!! TGATAGATGTTGATTAATCT+GGG - chr2_4:35300786-35300805 Msa0326110:intron 25.0%
! GAAATTGAATATACGTTTAG+TGG - chr2_4:35300815-35300834 Msa0326110:intron 25.0%
! ATTGACAAAAGTAGTGTAAT+TGG - chr2_4:35300915-35300934 Msa0326110:intron 25.0%
! TGCAATTTCAAAGACTATAA+TGG + chr2_4:35300970-35300989 None:intergenic 25.0%
! AAAAGTCTTTAATCATTACC+TGG - chr2_4:35301046-35301065 Msa0326110:intron 25.0%
! AACCCTAAGAAAAAATATTC+GGG + chr2_4:35301082-35301101 None:intergenic 25.0%
! CAACCCTAAGAAAAAATATT+CGG + chr2_4:35301083-35301102 None:intergenic 25.0%
!! TTCAAGTTTAAGGACTAAAT+TGG - chr2_4:35301169-35301188 Msa0326110:CDS 25.0%
! ATCATTATTGTAGATTCGTA+GGG - chr2_4:35301260-35301279 Msa0326110:intron 25.0%
! CAGAAAATAGTAAAAAGAAG+TGG + chr2_4:35301293-35301312 None:intergenic 25.0%
!!! TGTTTTGTTTTGTTCTAACT+TGG - chr2_4:35301362-35301381 Msa0326110:intron 25.0%
! AGTAAAACATTATTTACCGA+AGG + chr2_4:35301408-35301427 None:intergenic 25.0%
!! GTTTTACTATTTACTCCTTT+TGG - chr2_4:35301420-35301439 Msa0326110:intron 25.0%
! AATGATAGAAATCACATGAA+CGG - chr2_4:35301600-35301619 Msa0326110:intron 25.0%
!! TTTACATTTAGGGCATAATT+CGG + chr2_4:35301647-35301666 None:intergenic 25.0%
! CCGCTTAAAATTTACATTTA+GGG + chr2_4:35301657-35301676 None:intergenic 25.0%
!! CCCTAAATGTAAATTTTAAG+CGG - chr2_4:35301654-35301673 Msa0326110:intron 25.0%
!! CCTAAATGTAAATTTTAAGC+GGG - chr2_4:35301655-35301674 Msa0326110:intron 25.0%
!! CTAAATGTAAATTTTAAGCG+GGG - chr2_4:35301656-35301675 Msa0326110:intron 25.0%
! TTCTACGAAAGAATTGAATA+TGG - chr2_4:35301684-35301703 Msa0326110:intron 25.0%
! TATGTGTACACAATTGAATA+TGG - chr2_4:35301745-35301764 Msa0326110:CDS 25.0%
! TTAAGAGATTTATCATTCCT+GGG + chr2_4:35301861-35301880 None:intergenic 25.0%
! ATTAAGAGATTTATCATTCC+TGG + chr2_4:35301862-35301881 None:intergenic 25.0%
! TTGTTAGATATGATCTGAAA+AGG - chr2_4:35302014-35302033 Msa0326110:CDS 25.0%
! GTAATAGTTACCTTAGTTAA+GGG + chr2_4:35302086-35302105 None:intergenic 25.0%
! TGTAATAGTTACCTTAGTTA+AGG + chr2_4:35302087-35302106 None:intergenic 25.0%
! GTGATACTTAAGTTATCATT+TGG - chr2_4:35302434-35302453 Msa0326110:intron 25.0%
!!! TTTTGAAATTGTTGTAGAAG+CGG - chr2_4:35302615-35302634 Msa0326110:intron 25.0%
! AATTATGTTCGAAAACTCTT+TGG + chr2_4:35302757-35302776 None:intergenic 25.0%
!!! TACAAATTTTGGTGTTACTT+TGG - chr2_4:35302811-35302830 Msa0326110:intron 25.0%
!!! AAACTCACCTTTTAATTAGA+AGG - chr2_4:35303033-35303052 Msa0326110:intron 25.0%
! AATACAAATAGTCTATAGAC+TGG + chr2_4:35303295-35303314 None:intergenic 25.0%
! TCTATAGACTATTTGTATTG+TGG - chr2_4:35303296-35303315 Msa0326110:intron 25.0%
!! TACCTGCCAATTATTTATTT+TGG - chr2_4:35303333-35303352 Msa0326110:intron 25.0%
! AACCAAAATAAATAATTGGC+AGG + chr2_4:35303338-35303357 None:intergenic 25.0%
!! TGTATGTAAATAATGGAACA+GGG + chr2_4:35303545-35303564 None:intergenic 25.0%
! ATCACACTGTATGTAAATAA+TGG + chr2_4:35303552-35303571 None:intergenic 25.0%
! AGGAATAATGTTAGATAATC+TGG + chr2_4:35303595-35303614 None:intergenic 25.0%
! TAGATTTAAGGGAAAACAAA+AGG + chr2_4:35303615-35303634 None:intergenic 25.0%
!!! TTTAGGTTAAACGTTTTTTG+GGG + chr2_4:35303664-35303683 None:intergenic 25.0%
!!! GAATTTTCTTTTTTAGGTGA+GGG + chr2_4:35303749-35303768 None:intergenic 25.0%
!! CCATTGGAATTTTCTTTTTT+AGG + chr2_4:35303755-35303774 None:intergenic 25.0%
! CCTAAAAAAGAAAATTCCAA+TGG - chr2_4:35303752-35303771 Msa0326110:intron 25.0%
! TATATAGAATAAAGGGGAAT+TGG - chr2_4:35303852-35303871 Msa0326110:intron 25.0%
!!! TAGTTGGTTGATTTGTTATA+CGG - chr2_4:35303908-35303927 Msa0326110:intron 25.0%
!!! GAATAATTGACTTTTATGAC+TGG - chr2_4:35304005-35304024 Msa0326110:intron 25.0%
! GAAGTAAGAAGATTACAAAA+AGG + chr2_4:35304138-35304157 None:intergenic 25.0%
! TCATCTTAAAAGAAACCAAT+GGG + chr2_4:35304235-35304254 None:intergenic 25.0%
! ATCATCTTAAAAGAAACCAA+TGG + chr2_4:35304236-35304255 None:intergenic 25.0%
!! AGATGATTTTCTATAGGATT+TGG - chr2_4:35304249-35304268 Msa0326110:intron 25.0%
!! GATGATTTTCTATAGGATTT+GGG - chr2_4:35304250-35304269 Msa0326110:intron 25.0%
! TTCTTATATTTAGGTACAGA+GGG + chr2_4:35304372-35304391 None:intergenic 25.0%
! GTATTAATTAGGGGTTTATT+TGG + chr2_4:35304468-35304487 None:intergenic 25.0%
! AGACTTAGTGGTATTAATTA+GGG + chr2_4:35304478-35304497 None:intergenic 25.0%
! AAGTCTCTTGGAATATTAAA+AGG - chr2_4:35304492-35304511 Msa0326110:CDS 25.0%
! TTAAGAGTGAAAAAATCAGA+AGG - chr2_4:35304610-35304629 Msa0326110:intron 25.0%
! AAGACATGTGAAAAAGAATT+TGG + chr2_4:35304737-35304756 None:intergenic 25.0%
!! TTTTTCTTCACTCTTTATGT+TGG - chr2_4:35305090-35305109 Msa0326110:intron 25.0%
! TACTGTGTTAAATTGAGTAA+GGG - chr2_4:35305255-35305274 Msa0326110:intron 25.0%
!!! TCAACATTTACTGATTTTGA+TGG - chr2_4:35305337-35305356 Msa0326110:intron 25.0%
!! CTTCTTTGAAAGAAAAAATG+AGG + chr2_4:35305464-35305483 None:intergenic 25.0%
! TTCTTTCAAAGAAGAAGAAA+AGG - chr2_4:35305470-35305489 Msa0326110:intron 25.0%
! TATGTTATATGCATACTCTT+TGG + chr2_4:35305510-35305529 None:intergenic 25.0%
! AAAGAAAATGCAAAAAGATG+AGG - chr2_4:35305853-35305872 Msa0326110:intron 25.0%
! TTTCTGAATATTTCATTCCA+GGG - chr2_4:35305951-35305970 Msa0326110:intron 25.0%
!!! GTGTTATTTTGTTGTTGTAT+TGG - chr2_4:35306054-35306073 Msa0326110:intron 25.0%
! CTTATGATTTATTCATGTTG+TGG - chr2_4:35306095-35306114 Msa0326110:intron 25.0%
! AAATGAAAATGATACTCAGA+AGG - chr2_4:35306265-35306284 Msa0326110:intron 25.0%
!! GTTTGAAGTTGCATATAATT+TGG + chr2_4:35306352-35306371 None:intergenic 25.0%
! AACCTAGATATAGAGATATA+AGG - chr2_4:35306544-35306563 Msa0326110:intron 25.0%
! ACCTAGATATAGAGATATAA+GGG - chr2_4:35306545-35306564 Msa0326110:intron 25.0%
!!! GAATTAACATTTTCTGGTAA+AGG + chr2_4:35306731-35306750 None:intergenic 25.0%
!! ATGTCAGAATTAACATTTTC+TGG + chr2_4:35306737-35306756 None:intergenic 25.0%
! ATCACAATAAAACAGAAGAA+AGG - chr2_4:35306783-35306802 Msa0326110:intron 25.0%
! TCACAATAAAACAGAAGAAA+GGG - chr2_4:35306784-35306803 Msa0326110:intron 25.0%
! TTCAATGTCATAATCAGTAA+AGG + chr2_4:35306858-35306877 None:intergenic 25.0%
! GACATTGAAGTTAATATTGA+AGG - chr2_4:35306869-35306888 Msa0326110:intron 25.0%
! CATTGAAGTTAATATTGAAG+GGG - chr2_4:35306871-35306890 Msa0326110:intron 25.0%
! CTTCAAATCATCTTCTTATT+TGG + chr2_4:35306945-35306964 None:intergenic 25.0%
! TATCAGTTTATGTAAATAGC+AGG - chr2_4:35306971-35306990 Msa0326110:CDS 25.0%
! CTAATTATTATAGAAACCCT+AGG + chr2_4:35307080-35307099 None:intergenic 25.0%
! CGAACTAACTAAAAAGTTTA+AGG - chr2_4:35307131-35307150 Msa0326110:CDS 25.0%
!! GATTGTTTCTCTTTTTCTTG+AGG + chr2_4:35299696-35299715 None:intergenic 30.0%
! AAGAAGTCGATTTAGAGAAT+TGG - chr2_4:35299794-35299813 Msa0326110:three_prime_UTR 30.0%
TTCTTCACGTAATGAAGAAA+TGG + chr2_4:35299821-35299840 None:intergenic 30.0%
CAAATAAGGTTAATGAAGTG+AGG + chr2_4:35299871-35299890 None:intergenic 30.0%
! TTCATTAACCTTATTTGTGC+TGG - chr2_4:35299874-35299893 Msa0326110:three_prime_UTR 30.0%
TTTGATACCTAATTGGGTTA+GGG + chr2_4:35299932-35299951 None:intergenic 30.0%
! TTTTGATACCTAATTGGGTT+AGG + chr2_4:35299933-35299952 None:intergenic 30.0%
TATCAAATTATTAGCGGTGT+CGG + chr2_4:35300168-35300187 None:intergenic 30.0%
CTCAAATACATGTTTGGAAA+AGG + chr2_4:35300302-35300321 None:intergenic 30.0%
GGAATCACCAATTATGTTTA+TGG - chr2_4:35300373-35300392 Msa0326110:intron 30.0%
ATTAATCAATCTATGAAGCG+CGG + chr2_4:35300648-35300667 None:intergenic 30.0%
CGTCATAAAAAATACATGGA+TGG + chr2_4:35300705-35300724 None:intergenic 30.0%
! TGAATGATAGATGTTGCTTA+AGG - chr2_4:35300730-35300749 Msa0326110:intron 30.0%
GATCAGAATAAAACTTGACT+CGG + chr2_4:35300759-35300778 None:intergenic 30.0%
TGATTGAAGTTCATGAAATG+TGG - chr2_4:35300887-35300906 Msa0326110:intron 30.0%
AAAAAATATTCGGGACACAA+TGG + chr2_4:35301073-35301092 None:intergenic 30.0%
!!! TGTCCCGAATATTTTTTCTT+AGG - chr2_4:35301076-35301095 Msa0326110:CDS 30.0%
!!! GTCCCGAATATTTTTTCTTA+GGG - chr2_4:35301077-35301096 Msa0326110:CDS 30.0%
! CATGGGTATTTTCAATTGTT+TGG - chr2_4:35301106-35301125 Msa0326110:CDS 30.0%
!! TTTGCAGTCTTTCAAGTTTA+AGG - chr2_4:35301159-35301178 Msa0326110:CDS 30.0%
TTCAAATCGGAGACTATTAT+AGG - chr2_4:35301199-35301218 Msa0326110:CDS 30.0%
!! AATGATGTGCATTTTGCTAT+GGG + chr2_4:35301246-35301265 None:intergenic 30.0%
! TAATGATGTGCATTTTGCTA+TGG + chr2_4:35301247-35301266 None:intergenic 30.0%
CATCATTATTGTAGATTCGT+AGG - chr2_4:35301259-35301278 Msa0326110:intron 30.0%
AAACAAAGAAATGGTCCAAA+AGG + chr2_4:35301438-35301457 None:intergenic 30.0%
TTCAATTGGAAATACACAAC+CGG - chr2_4:35301459-35301478 Msa0326110:intron 30.0%
!! AATCTATGTTTTTGTCCTCA+AGG + chr2_4:35301566-35301585 None:intergenic 30.0%
CCCGCTTAAAATTTACATTT+AGG + chr2_4:35301658-35301677 None:intergenic 30.0%
CTCAATAAAACAACTAGGAT+AGG + chr2_4:35301899-35301918 None:intergenic 30.0%
AGATCTGATCCCAAAATTAT+AGG + chr2_4:35302058-35302077 None:intergenic 30.0%
AGTACTGTAATCAGATTTGT+TGG + chr2_4:35302138-35302157 None:intergenic 30.0%
TAGTTGAATTTCATGCAAAC+AGG - chr2_4:35302187-35302206 Msa0326110:intron 30.0%
AGTTGAATTTCATGCAAACA+GGG - chr2_4:35302188-35302207 Msa0326110:intron 30.0%
TCTATGTTAAAGTCTTCAAG+AGG + chr2_4:35302258-35302277 None:intergenic 30.0%
ATAGAAGTTGAAGATCAAAG+TGG - chr2_4:35302273-35302292 Msa0326110:intron 30.0%
!!! GTGAGGGTTTTAAATATGAA+AGG - chr2_4:35302386-35302405 Msa0326110:intron 30.0%
TGAAAGGACAATATACCATT+TGG - chr2_4:35302402-35302421 Msa0326110:intron 30.0%
TACTTAAGTTATCATTTGGC+AGG - chr2_4:35302438-35302457 Msa0326110:intron 30.0%
ACTTAAGTTATCATTTGGCA+GGG - chr2_4:35302439-35302458 Msa0326110:intron 30.0%
TCATATTACATTGAGCACAA+TGG + chr2_4:35302664-35302683 None:intergenic 30.0%
ATTGTGCTCAATGTAATATG+AGG - chr2_4:35302663-35302682 Msa0326110:intron 30.0%
TATTCATTAACCAGCCATAA+AGG - chr2_4:35302895-35302914 Msa0326110:intron 30.0%
TTGTGATAGCTTAACCTTTA+TGG + chr2_4:35302912-35302931 None:intergenic 30.0%
!! TCACCTTTTAATTAGAAGGA+TGG - chr2_4:35303037-35303056 Msa0326110:intron 30.0%
!! CACCTTTTAATTAGAAGGAT+GGG - chr2_4:35303038-35303057 Msa0326110:intron 30.0%
!! ACCTTTTAATTAGAAGGATG+GGG - chr2_4:35303039-35303058 Msa0326110:intron 30.0%
ATTGCCGATGACTATTAAAT+AGG + chr2_4:35303395-35303414 None:intergenic 30.0%
! GTATGTAAATAATGGAACAG+GGG + chr2_4:35303544-35303563 None:intergenic 30.0%
! CTGTATGTAAATAATGGAAC+AGG + chr2_4:35303546-35303565 None:intergenic 30.0%
CTCTCGTCAATTAGATTTAA+GGG + chr2_4:35303626-35303645 None:intergenic 30.0%
TCTCTCGTCAATTAGATTTA+AGG + chr2_4:35303627-35303646 None:intergenic 30.0%
!!! GGAATTTTCTTTTTTAGGTG+AGG + chr2_4:35303750-35303769 None:intergenic 30.0%
!! AGAGCAATTAGTTTGTTAGT+TGG - chr2_4:35303892-35303911 Msa0326110:intron 30.0%
CATCTTAAAAGAAACCAATG+GGG + chr2_4:35304234-35304253 None:intergenic 30.0%
GTTCTTATATTTAGGTACAG+AGG + chr2_4:35304373-35304392 None:intergenic 30.0%
TGAAAAGGAACTTATGTGTA+GGG + chr2_4:35304416-35304435 None:intergenic 30.0%
TTGAAAAGGAACTTATGTGT+AGG + chr2_4:35304417-35304436 None:intergenic 30.0%
GACTTAGTGGTATTAATTAG+GGG + chr2_4:35304477-35304496 None:intergenic 30.0%
GAGACTTAGTGGTATTAATT+AGG + chr2_4:35304479-35304498 None:intergenic 30.0%
ATTAATACCACTAAGTCTCT+TGG - chr2_4:35304480-35304499 Msa0326110:CDS 30.0%
TAATATTCCAAGAGACTTAG+TGG + chr2_4:35304490-35304509 None:intergenic 30.0%
! TTTTCCACATACACATACAA+AGG - chr2_4:35304520-35304539 Msa0326110:intron 30.0%
TTTCCACATACACATACAAA+GGG - chr2_4:35304521-35304540 Msa0326110:intron 30.0%
!! ACACATACAAAGGGTATTAT+AGG - chr2_4:35304530-35304549 Msa0326110:intron 30.0%
!!! ATCAGAAGGTGCTTTTATAT+AGG - chr2_4:35304624-35304643 Msa0326110:intron 30.0%
! TTTGAAATTCTCAAGCTACT+GGG - chr2_4:35305035-35305054 Msa0326110:intron 30.0%
!!! TTGGCTGAACTTTTTTACAT+AGG - chr2_4:35305109-35305128 Msa0326110:intron 30.0%
CTTACTCAATTTAACACAGT+AGG + chr2_4:35305256-35305275 None:intergenic 30.0%
CTACTGTGTTAAATTGAGTA+AGG - chr2_4:35305254-35305273 Msa0326110:intron 30.0%
ACTGTGTTAAATTGAGTAAG+GGG - chr2_4:35305256-35305275 Msa0326110:intron 30.0%
AAACAATGATACCGAAAAAC+TGG + chr2_4:35305304-35305323 None:intergenic 30.0%
AAAGAAAAAATGAGGCTGAA+GGG + chr2_4:35305456-35305475 None:intergenic 30.0%
!! TTATCACTTGTTATGAGCAT+GGG - chr2_4:35305743-35305762 Msa0326110:intron 30.0%
GAATGAACAATCAAGATGTT+GGG - chr2_4:35305798-35305817 Msa0326110:intron 30.0%
AATGAACAATCAAGATGTTG+GGG - chr2_4:35305799-35305818 Msa0326110:intron 30.0%
AAAGAAGAGATGAAATTAGG+TGG - chr2_4:35305885-35305904 Msa0326110:intron 30.0%
AAGAAGAGATGAAATTAGGT+GGG - chr2_4:35305886-35305905 Msa0326110:intron 30.0%
GTTTCTGAATATTTCATTCC+AGG - chr2_4:35305950-35305969 Msa0326110:intron 30.0%
! TTGTGAAACACTTTTACACT+TGG + chr2_4:35306175-35306194 None:intergenic 30.0%
! TGTAAATCAGAATTGGTTTC+TGG + chr2_4:35306311-35306330 None:intergenic 30.0%
AGAAACCAATTCTGATTTAC+AGG - chr2_4:35306310-35306329 Msa0326110:intron 30.0%
TGTTACCTGTAAATCAGAAT+TGG + chr2_4:35306318-35306337 None:intergenic 30.0%
ACCCTTATATCTCTATATCT+AGG + chr2_4:35306549-35306568 None:intergenic 30.0%
ACATTCTAGACCAAATGAAT+GGG - chr2_4:35306753-35306772 Msa0326110:intron 30.0%
TAGCAGGATTATAAAGACAA+TGG - chr2_4:35306987-35307006 Msa0326110:CDS 30.0%
ATCTCATGTAAATATCTGGA+TGG - chr2_4:35307036-35307055 Msa0326110:CDS 30.0%
TCTCATGTAAATATCTGGAT+GGG - chr2_4:35307037-35307056 Msa0326110:CDS 30.0%
TGTGAAGAATTTCTTACTCT+TGG - chr2_4:35307271-35307290 Msa0326110:five_prime_UTR 30.0%
! TTTCTCTTTTTCTTGAGGAG+TGG + chr2_4:35299691-35299710 None:intergenic 35.0%
ATCAATCAAACAGAATCGAG+TGG - chr2_4:35299716-35299735 Msa0326110:three_prime_UTR 35.0%
AATTGAAGATAGCAGGAACA+TGG - chr2_4:35299758-35299777 Msa0326110:three_prime_UTR 35.0%
GAATTCTACCAGCACAAATA+AGG + chr2_4:35299885-35299904 None:intergenic 35.0%
TTTATGTGTCAGTGTTGTGT+CGG - chr2_4:35300200-35300219 Msa0326110:CDS 35.0%
ACCAATTATGTTTATGGTGC+TGG - chr2_4:35300379-35300398 Msa0326110:intron 35.0%
ACCAGCACCATAAACATAAT+TGG + chr2_4:35300383-35300402 None:intergenic 35.0%
TGTCGTGTCAAAATCACATT+CGG - chr2_4:35300542-35300561 Msa0326110:CDS 35.0%
GTCGCGTCATAAAAAATACA+TGG + chr2_4:35300709-35300728 None:intergenic 35.0%
!! TAGTCTTTGAAATTGCACTC+TGG - chr2_4:35300973-35300992 Msa0326110:CDS 35.0%
! TTTTTCTTAGGGTTGTGACA+TGG - chr2_4:35301088-35301107 Msa0326110:CDS 35.0%
! TTTTCTTAGGGTTGTGACAT+GGG - chr2_4:35301089-35301108 Msa0326110:CDS 35.0%
GAAAGACTGCAAAAATTCCT+AGG + chr2_4:35301152-35301171 None:intergenic 35.0%
ACAAAACAGAGAATGAGTTC+AGG + chr2_4:35301350-35301369 None:intergenic 35.0%
! ACACACACTTTGTTACTTAC+CGG + chr2_4:35301481-35301500 None:intergenic 35.0%
CATGTGATTTCTATCATTCG+AGG + chr2_4:35301598-35301617 None:intergenic 35.0%
!! TTTGATTTGGTATGTCCCTT+CGG - chr2_4:35301930-35301949 Msa0326110:intron 35.0%
GATCTAACATCCCTTAACTA+AGG - chr2_4:35302073-35302092 Msa0326110:CDS 35.0%
ATTCAACTAAGCTTCAGAGA+GGG + chr2_4:35302176-35302195 None:intergenic 35.0%
AATTCAACTAAGCTTCAGAG+AGG + chr2_4:35302177-35302196 None:intergenic 35.0%
AATAATTCCACCAAGATGCA+TGG + chr2_4:35302356-35302375 None:intergenic 35.0%
TATCACTTCAACAGTCCAAA+TGG + chr2_4:35302420-35302439 None:intergenic 35.0%
GGTTAAGCTATCACAATACA+TGG - chr2_4:35302916-35302935 Msa0326110:intron 35.0%
GCCAACACTTTAAACCAAAA+GGG + chr2_4:35302985-35303004 None:intergenic 35.0%
TGCCAACACTTTAAACCAAA+AGG + chr2_4:35302986-35303005 None:intergenic 35.0%
!!! TTTTGGTTTAAAGTGTTGGC+AGG - chr2_4:35302985-35303004 Msa0326110:intron 35.0%
!! TTTGGTTTAAAGTGTTGGCA+GGG - chr2_4:35302986-35303005 Msa0326110:intron 35.0%
AGTTTCAGCAAAAGGTAGAT+GGG + chr2_4:35303018-35303037 None:intergenic 35.0%
AAAAGGTGAGTTTCAGCAAA+AGG + chr2_4:35303026-35303045 None:intergenic 35.0%
!! CCTTTTAATTAGAAGGATGG+GGG - chr2_4:35303040-35303059 Msa0326110:intron 35.0%
! TTAAAGCCTTTTTGACCAAG+TGG + chr2_4:35303083-35303102 None:intergenic 35.0%
TTGTGATCCAAAAGTCATTG+AGG - chr2_4:35303261-35303280 Msa0326110:intron 35.0%
GCTGCCTATTTAATAGTCAT+CGG - chr2_4:35303388-35303407 Msa0326110:intron 35.0%
CTTTATATGCTCATTCCCAT+TGG + chr2_4:35303771-35303790 None:intergenic 35.0%
GGAATGAGCATATAAAGTTG+TGG - chr2_4:35303774-35303793 Msa0326110:intron 35.0%
TGTTCATAGCTTGAACATCA+TGG + chr2_4:35303827-35303846 None:intergenic 35.0%
AGCCTCAATGAATAGAAAAG+AGG - chr2_4:35303973-35303992 Msa0326110:intron 35.0%
GCCTCAATGAATAGAAAAGA+GGG - chr2_4:35303974-35303993 Msa0326110:intron 35.0%
! TCCCTCTTTTCTATTCATTG+AGG + chr2_4:35303978-35303997 None:intergenic 35.0%
ATTTGGGCATTCAAAGTGAA+GGG - chr2_4:35304266-35304285 Msa0326110:intron 35.0%
ATACCCTTTGTATGTGTATG+TGG + chr2_4:35304527-35304546 None:intergenic 35.0%
!!! GAAGGTGCTTTTATATAGGA+CGG - chr2_4:35304628-35304647 Msa0326110:intron 35.0%
! AAGAATTTGGCTCCTCTAAA+GGG + chr2_4:35304724-35304743 None:intergenic 35.0%
! AAAGAATTTGGCTCCTCTAA+AGG + chr2_4:35304725-35304744 None:intergenic 35.0%
TCCAATACTGCAAATTGACA+TGG - chr2_4:35304816-35304835 Msa0326110:intron 35.0%
ACCATGTCAATTTGCAGTAT+TGG + chr2_4:35304820-35304839 None:intergenic 35.0%
TACTGCAAATTGACATGGTA+TGG - chr2_4:35304821-35304840 Msa0326110:intron 35.0%
ATTAGATGGTTATCAGATGC+TGG - chr2_4:35304865-35304884 Msa0326110:intron 35.0%
CAGTAGCTTGAGAATTTCAA+AGG + chr2_4:35305036-35305055 None:intergenic 35.0%
!! CTTTGAAATTCTCAAGCTAC+TGG - chr2_4:35305034-35305053 Msa0326110:intron 35.0%
ATACCGAAAAACTGGAACAT+GGG + chr2_4:35305296-35305315 None:intergenic 35.0%
AAGAAAAAATGAGGCTGAAG+GGG + chr2_4:35305455-35305474 None:intergenic 35.0%
GAAAGAAAAAATGAGGCTGA+AGG + chr2_4:35305457-35305476 None:intergenic 35.0%
TACTCTCCTATACAATGAAG+TGG - chr2_4:35305542-35305561 Msa0326110:intron 35.0%
AATGCTCCACTTCATTGTAT+AGG + chr2_4:35305551-35305570 None:intergenic 35.0%
TGAATCATGGATTCAGTCTT+TGG - chr2_4:35305618-35305637 Msa0326110:intron 35.0%
CATGCTCATAACAAGTGATA+AGG + chr2_4:35305744-35305763 None:intergenic 35.0%
!! CTTATCACTTGTTATGAGCA+TGG - chr2_4:35305742-35305761 Msa0326110:intron 35.0%
CGAATGAACAATCAAGATGT+TGG - chr2_4:35305797-35305816 Msa0326110:intron 35.0%
ATGAACAATCAAGATGTTGG+GGG - chr2_4:35305800-35305819 Msa0326110:intron 35.0%
TGAACGAATTGGTCACTATT+GGG - chr2_4:35306028-35306047 Msa0326110:intron 35.0%
TGTTGTTGTATTGGATGCAT+TGG - chr2_4:35306063-35306082 Msa0326110:intron 35.0%
! AAATGATACTCAGAAGGCAT+TGG - chr2_4:35306271-35306290 Msa0326110:intron 35.0%
TAAAGGTTAAGATCGAGTCA+AGG - chr2_4:35306398-35306417 Msa0326110:intron 35.0%
TTAAGATCGAGTCAAGGAAA+AGG - chr2_4:35306404-35306423 Msa0326110:intron 35.0%
!!! ATGGGTTTTGAAAGATCAAG+AGG - chr2_4:35306475-35306494 Msa0326110:intron 35.0%
!! TCACTTTTAGCACATTACTG+TGG + chr2_4:35306524-35306543 None:intergenic 35.0%
GATATACTTATTCTCTGCAG+TGG - chr2_4:35306574-35306593 Msa0326110:intron 35.0%
!!! AATTCAACTGCTGCTTTTGA+TGG - chr2_4:35306686-35306705 Msa0326110:intron 35.0%
GACATTCTAGACCAAATGAA+TGG - chr2_4:35306752-35306771 Msa0326110:intron 35.0%
CATTCTAGACCAAATGAATG+GGG - chr2_4:35306754-35306773 Msa0326110:intron 35.0%
TAAAACAGAAGAAAGGGATG+TGG - chr2_4:35306790-35306809 Msa0326110:intron 35.0%
AGGGATCTCATGTAAATATC+TGG - chr2_4:35307032-35307051 Msa0326110:CDS 35.0%
AGAATTTCTTACTCTTGGTG+TGG - chr2_4:35307276-35307295 Msa0326110:five_prime_UTR 35.0%
ATGGCGAAATTGAAGATAGC+AGG - chr2_4:35299751-35299770 Msa0326110:three_prime_UTR 40.0%
GAAGTGAGGATTATCGCAAT+TGG + chr2_4:35299857-35299876 None:intergenic 40.0%
! TTGTGCTGGTAGAATTCTCA+AGG - chr2_4:35299888-35299907 Msa0326110:three_prime_UTR 40.0%
! ACCTAATTGGGTTAGGGTTA+GGG + chr2_4:35299926-35299945 None:intergenic 40.0%
! TACCTAATTGGGTTAGGGTT+AGG + chr2_4:35299927-35299946 None:intergenic 40.0%
TTGAGGAACAAAGCTCTCAT+AGG - chr2_4:35300010-35300029 Msa0326110:exon 40.0%
TTATGTGTCAGTGTTGTGTC+GGG - chr2_4:35300201-35300220 Msa0326110:CDS 40.0%
CATTCGGTAGTTATATGCGT+CGG - chr2_4:35300558-35300577 Msa0326110:intron 40.0%
GATTCGCTAACTAGCTAACA+TGG + chr2_4:35300946-35300965 None:intergenic 40.0%
!! CACTTGGTGCATGCTAAAAA+TGG + chr2_4:35301323-35301342 None:intergenic 40.0%
AATGAGTTCAGGTCTACACT+TGG + chr2_4:35301339-35301358 None:intergenic 40.0%
GGCAATTAGACCATATGCAT+CGG + chr2_4:35301626-35301645 None:intergenic 40.0%
!! TCCTGGGCTAAAAAGTGTTT+GGG + chr2_4:35301845-35301864 None:intergenic 40.0%
!! TTCCTGGGCTAAAAAGTGTT+TGG + chr2_4:35301846-35301865 None:intergenic 40.0%
!! TTGATTTGGTATGTCCCTTC+GGG - chr2_4:35301931-35301950 Msa0326110:intron 40.0%
AATGCATGTACAATCCCGAA+GGG + chr2_4:35301948-35301967 None:intergenic 40.0%
AAATGCATGTACAATCCCGA+AGG + chr2_4:35301949-35301968 None:intergenic 40.0%
TAGGATCAGAGATTGATCAG+AGG - chr2_4:35302310-35302329 Msa0326110:intron 40.0%
TGCAGAATTTCCATGCATCT+TGG - chr2_4:35302343-35302362 Msa0326110:intron 40.0%
AGAATTTCCATGCATCTTGG+TGG - chr2_4:35302346-35302365 Msa0326110:intron 40.0%
!!! GGGAAGCGTTTTATCAGAAA+GGG - chr2_4:35302494-35302513 Msa0326110:intron 40.0%
GATAGCTTAACCTTTATGGC+TGG + chr2_4:35302908-35302927 None:intergenic 40.0%
!!! GCCCTTTTGGTTTAAAGTGT+TGG - chr2_4:35302981-35303000 Msa0326110:intron 40.0%
GAGTTTCAGCAAAAGGTAGA+TGG + chr2_4:35303019-35303038 None:intergenic 40.0%
CCCCCATCCTTCTAATTAAA+AGG + chr2_4:35303043-35303062 None:intergenic 40.0%
TTTAATTAGAAGGATGGGGG+TGG - chr2_4:35303043-35303062 Msa0326110:intron 40.0%
CCTGCAAAGCAAATTACACA+TGG + chr2_4:35303228-35303247 None:intergenic 40.0%
!! CCATGTGTAATTTGCTTTGC+AGG - chr2_4:35303225-35303244 Msa0326110:intron 40.0%
! CTACTCACCTCAATGACTTT+TGG + chr2_4:35303271-35303290 None:intergenic 40.0%
AAGAATTGGAACAATCGCCT+TGG - chr2_4:35303425-35303444 Msa0326110:intron 40.0%
! TGCAACTCTGCAGAATTTTG+AGG - chr2_4:35303449-35303468 Msa0326110:intron 40.0%
! GCAACTCTGCAGAATTTTGA+GGG - chr2_4:35303450-35303469 Msa0326110:intron 40.0%
! TCTGGTTCGTTAGTTAGAGT+AGG + chr2_4:35303577-35303596 None:intergenic 40.0%
! TAGTGTGTGTTGTTGTTGCT+AGG - chr2_4:35303941-35303960 Msa0326110:intron 40.0%
!! TGTGTACTTTTTGCTTTCCC+TGG - chr2_4:35304067-35304086 Msa0326110:intron 40.0%
GAAATGATCCCAACAGAATG+CGG - chr2_4:35304202-35304221 Msa0326110:intron 40.0%
GGAATTAACCGCATTCTGTT+GGG + chr2_4:35304213-35304232 None:intergenic 40.0%
GATTTGGGCATTCAAAGTGA+AGG - chr2_4:35304265-35304284 Msa0326110:intron 40.0%
! GTGCTTTTATATAGGACGGA+GGG - chr2_4:35304632-35304651 Msa0326110:intron 40.0%
! AGAATTTGGCTCCTCTAAAG+GGG + chr2_4:35304723-35304742 None:intergenic 40.0%
!! TATGGTGCTACTTCATGCTA+CGG - chr2_4:35304839-35304858 Msa0326110:intron 40.0%
!! AACAAACTTCGCTTTTGCAG+AGG + chr2_4:35305211-35305230 None:intergenic 40.0%
! TGCAAAAGCGAAGTTTGTTC+AGG - chr2_4:35305212-35305231 Msa0326110:intron 40.0%
! AAAGCGAAGTTTGTTCAGGT+AGG - chr2_4:35305216-35305235 Msa0326110:intron 40.0%
! CTTCCCATGTTCCAGTTTTT+CGG - chr2_4:35305290-35305309 Msa0326110:intron 40.0%
GATACCGAAAAACTGGAACA+TGG + chr2_4:35305297-35305316 None:intergenic 40.0%
CGGTATCATTGTTTGATCAG+AGG - chr2_4:35305310-35305329 Msa0326110:intron 40.0%
! TGGAGCATTAATGCAACAGT+TGG - chr2_4:35305562-35305581 Msa0326110:intron 40.0%
! GGAGATGTTTTCGTGTGATT+AGG - chr2_4:35305583-35305602 Msa0326110:intron 40.0%
! GATGTTTTCGTGTGATTAGG+AGG - chr2_4:35305586-35305605 Msa0326110:intron 40.0%
GAGGTCATAGGTTTGAATCA+TGG - chr2_4:35305605-35305624 Msa0326110:intron 40.0%
GCCTACAATAGAATCGTGAT+CGG - chr2_4:35305659-35305678 Msa0326110:intron 40.0%
ACCGATCACGATTCTATTGT+AGG + chr2_4:35305663-35305682 None:intergenic 40.0%
!! TGCCATTGATTTCCTTGTTG+AGG - chr2_4:35305823-35305842 Msa0326110:intron 40.0%
CTCCTCAACAAGGAAATCAA+TGG + chr2_4:35305828-35305847 None:intergenic 40.0%
TGATTTCCTTGTTGAGGAGA+AGG - chr2_4:35305829-35305848 Msa0326110:intron 40.0%
CTGAACGAATTGGTCACTAT+TGG - chr2_4:35306027-35306046 Msa0326110:intron 40.0%
CTGCGATGTAAGAAGTTTGA+TGG + chr2_4:35306209-35306228 None:intergenic 40.0%
CATCAAACTTCTTACATCGC+AGG - chr2_4:35306207-35306226 Msa0326110:intron 40.0%
GCAGCAGTTGAATTCATTTG+AGG + chr2_4:35306680-35306699 None:intergenic 40.0%
!!! ACTGCTGCTTTTGATGGTAT+TGG - chr2_4:35306692-35306711 Msa0326110:intron 40.0%
GATCTTCAACCCCATTCATT+TGG + chr2_4:35306766-35306785 None:intergenic 40.0%
CTCTCTGCAGATATAGCTAA+AGG - chr2_4:35306827-35306846 Msa0326110:intron 40.0%
CATAGACAGGTACTCAGTTA+TGG + chr2_4:35306900-35306919 None:intergenic 40.0%
CATAACTGAGTACCTGTCTA+TGG - chr2_4:35306898-35306917 Msa0326110:intron 40.0%
! TGTTTCTGCTCTTTGATGCA+GGG - chr2_4:35307013-35307032 Msa0326110:CDS 40.0%
TACATTTGTGCTCATTCCCT+AGG - chr2_4:35307060-35307079 Msa0326110:CDS 40.0%
ACATTTGTGCTCATTCCCTA+GGG - chr2_4:35307061-35307080 Msa0326110:CDS 40.0%
AAGATAGCAGGAACATGGTC+AGG - chr2_4:35299763-35299782 Msa0326110:three_prime_UTR 45.0%
ACCCTAACCCTAACCCAATT+AGG - chr2_4:35299922-35299941 Msa0326110:three_prime_UTR 45.0%
AGTGACAGTAGCGAGAATCT+TGG + chr2_4:35299962-35299981 None:intergenic 45.0%
! TACTGTCACTTCTCCTCAAC+AGG - chr2_4:35299972-35299991 Msa0326110:three_prime_UTR 45.0%
! ACTGTCACTTCTCCTCAACA+GGG - chr2_4:35299973-35299992 Msa0326110:three_prime_UTR 45.0%
! CTCATAGGCTTGCTCGTATT+AGG - chr2_4:35300025-35300044 Msa0326110:exon 45.0%
TGAAGCTCAAATACTGACGC+CGG - chr2_4:35300137-35300156 Msa0326110:CDS 45.0%
TCTCGGTCAAGAAACCTTAG+CGG - chr2_4:35300270-35300289 Msa0326110:CDS 45.0%
GCGTTGTTGTGTCAAACACT+GGG - chr2_4:35300600-35300619 Msa0326110:intron 45.0%
TCTCGGTTGAGAAACCTTAG+CGG - chr2_4:35300667-35300686 Msa0326110:CDS 45.0%
AATTGCACTCTGGCGCAATT+TGG - chr2_4:35300983-35301002 Msa0326110:CDS 45.0%
!! TCCCAAACACTTTTTAGCCC+AGG - chr2_4:35301841-35301860 Msa0326110:intron 45.0%
! AGTGGACAGAAAGTACGCTT+AGG - chr2_4:35302291-35302310 Msa0326110:intron 45.0%
ATTTGGCAGGGCAGTAATGA+TGG - chr2_4:35302451-35302470 Msa0326110:intron 45.0%
TTTGGCAGGGCAGTAATGAT+GGG - chr2_4:35302452-35302471 Msa0326110:intron 45.0%
GGACTGATGCTTCATGCAAA+GGG - chr2_4:35302473-35302492 Msa0326110:intron 45.0%
GACTGATGCTTCATGCAAAG+GGG - chr2_4:35302474-35302493 Msa0326110:intron 45.0%
!!! GGGGAAGCGTTTTATCAGAA+AGG - chr2_4:35302493-35302512 Msa0326110:intron 45.0%
! TGCACTTGAAGTGCTTACCA+TGG - chr2_4:35302529-35302548 Msa0326110:intron 45.0%
! GCACTTGAAGTGCTTACCAT+GGG - chr2_4:35302530-35302549 Msa0326110:intron 45.0%
TAAGGAACTAACCTCTCCCA+TGG + chr2_4:35302549-35302568 None:intergenic 45.0%
CTCAAACATGTCCTCTCATG+AGG - chr2_4:35302957-35302976 Msa0326110:intron 45.0%
ATTCTGCAGAGTTGCAACCA+AGG + chr2_4:35303445-35303464 None:intergenic 45.0%
TATTGCCGCCTTCAGTTGAA+GGG + chr2_4:35303490-35303509 None:intergenic 45.0%
! ACTGGTTAGTCCAGCATGAA+AGG - chr2_4:35304023-35304042 Msa0326110:intron 45.0%
! AGAGCACTTTCCTTTCATGC+TGG + chr2_4:35304036-35304055 None:intergenic 45.0%
AACTGTACCATGCAAGACCA+GGG + chr2_4:35304087-35304106 None:intergenic 45.0%
AAACTGTACCATGCAAGACC+AGG + chr2_4:35304088-35304107 None:intergenic 45.0%
GGGAATTAACCGCATTCTGT+TGG + chr2_4:35304214-35304233 None:intergenic 45.0%
GAATGCGGTTAATTCCCCAT+TGG - chr2_4:35304217-35304236 Msa0326110:intron 45.0%
GTGAAGGGTTCACTATAGAG+TGG - chr2_4:35304281-35304300 Msa0326110:intron 45.0%
AGAGGGAGTAATGAACTACG+AGG + chr2_4:35304355-35304374 None:intergenic 45.0%
! GGTGCTTTTATATAGGACGG+AGG - chr2_4:35304631-35304650 Msa0326110:intron 45.0%
! AATTTGGCTCCTCTAAAGGG+GGG + chr2_4:35304721-35304740 None:intergenic 45.0%
! GAATTTGGCTCCTCTAAAGG+GGG + chr2_4:35304722-35304741 None:intergenic 45.0%
!! ATGGTGCTACTTCATGCTAC+GGG - chr2_4:35304840-35304859 Msa0326110:intron 45.0%
TCATGCTACGGGACATTAGA+TGG - chr2_4:35304851-35304870 Msa0326110:intron 45.0%
! AAAGCGCCTTGAAATGGCTA+GGG - chr2_4:35304888-35304907 Msa0326110:intron 45.0%
CAGGAATTGAACGTGCTCAT+GGG - chr2_4:35304911-35304930 Msa0326110:intron 45.0%
AATTGAACGTGCTCATGGGA+AGG - chr2_4:35304915-35304934 Msa0326110:intron 45.0%
ATAACTCACAGTGCAACCTC+TGG + chr2_4:35304979-35304998 None:intergenic 45.0%
TTGAGACTAGAGCTGCTTGA+AGG - chr2_4:35305135-35305154 Msa0326110:intron 45.0%
TGAGACTAGAGCTGCTTGAA+GGG - chr2_4:35305136-35305155 Msa0326110:intron 45.0%
CTTGCCTTGATTTCTCCAAC+TGG + chr2_4:35305182-35305201 None:intergenic 45.0%
TCGTGTGATTAGGAGGTCAT+AGG - chr2_4:35305593-35305612 Msa0326110:intron 45.0%
ACAAGTGATAAGGCCTCATC+TGG + chr2_4:35305734-35305753 None:intergenic 45.0%
TCTTTGCCTTCTCCTCAACA+AGG + chr2_4:35305838-35305857 None:intergenic 45.0%
TTCATTCCAGGGAGCAAAAG+CGG - chr2_4:35305962-35305981 Msa0326110:intron 45.0%
AGATCCACGGCCTTCTTTAA+GGG + chr2_4:35306000-35306019 None:intergenic 45.0%
TCTGGAGAGACTGAACGAAT+TGG - chr2_4:35306017-35306036 Msa0326110:intron 45.0%
CTTACATCGCAGGTTTGAGA+AGG - chr2_4:35306217-35306236 Msa0326110:intron 45.0%
AGAAGAAAGGGATGTGGAGA+TGG - chr2_4:35306796-35306815 Msa0326110:intron 45.0%
! GTGTTTCTGCTCTTTGATGC+AGG - chr2_4:35307012-35307031 Msa0326110:CDS 45.0%
GCTGAGACTGTTCTCAAAGT+AGG - chr2_4:35307221-35307240 Msa0326110:exon 45.0%
GAGACTGTTCTCAAAGTAGG+TGG - chr2_4:35307224-35307243 Msa0326110:exon 45.0%
!! TATATTGTATATAATATAAA+AGG + chr2_4:35305430-35305449 None:intergenic 5.0%
ACAAGAGACTGACCCTGTTG+AGG + chr2_4:35299988-35300007 None:intergenic 50.0%
!! GGGTCAGTCTCTTGTTGTTG+AGG - chr2_4:35299993-35300012 Msa0326110:three_prime_UTR 50.0%
CTCGGTCAAGAAACCTTAGC+GGG - chr2_4:35300271-35300290 Msa0326110:CDS 50.0%
TCGGTCAAGAAACCTTAGCG+GGG - chr2_4:35300272-35300291 Msa0326110:CDS 50.0%
CGCGTTGTTGTGTCAAACAC+TGG - chr2_4:35300599-35300618 Msa0326110:intron 50.0%
ACTGGGACACACCTTATCTG+AGG - chr2_4:35300617-35300636 Msa0326110:intron 50.0%
CTCGGTTGAGAAACCTTAGC+GGG - chr2_4:35300668-35300687 Msa0326110:CDS 50.0%
TCGGTTGAGAAACCTTAGCG+GGG - chr2_4:35300669-35300688 Msa0326110:CDS 50.0%
TATTCGGGACACAATGGACC+AGG + chr2_4:35301067-35301086 None:intergenic 50.0%
AGTAGTCAGCTTGGTCCTTG+AGG - chr2_4:35301548-35301567 Msa0326110:intron 50.0%
ACATGAACGGCCGATGCATA+TGG - chr2_4:35301613-35301632 Msa0326110:intron 50.0%
!! CTGCAACTGCATTGGCTGAA+AGG - chr2_4:35302214-35302233 Msa0326110:intron 50.0%
! TTGGCTGAAAGGCATGCAGA+TGG - chr2_4:35302225-35302244 Msa0326110:intron 50.0%
GGGACTGATGCTTCATGCAA+AGG - chr2_4:35302472-35302491 Msa0326110:intron 50.0%
! TGAAGTGCTTACCATGGGAG+AGG - chr2_4:35302535-35302554 Msa0326110:intron 50.0%
AGGGGTCCACTTGGTCAAAA+AGG - chr2_4:35303074-35303093 Msa0326110:intron 50.0%
CCTTCAGTTGAAGGGTTTGG+AGG + chr2_4:35303482-35303501 None:intergenic 50.0%
CCTCCAAACCCTTCAACTGA+AGG - chr2_4:35303479-35303498 Msa0326110:intron 50.0%
CCAAACCCTTCAACTGAAGG+CGG - chr2_4:35303482-35303501 Msa0326110:intron 50.0%
GTATTGCCGCCTTCAGTTGA+AGG + chr2_4:35303491-35303510 None:intergenic 50.0%
!!! TTTTTTAGGTGAGGGCTGCG+CGG + chr2_4:35303741-35303760 None:intergenic 50.0%
!! TTGCTTTCCCTGGTCTTGCA+TGG - chr2_4:35304077-35304096 Msa0326110:intron 50.0%
CTAAGTGTTCCCCCCTTTAG+AGG - chr2_4:35304709-35304728 Msa0326110:CDS 50.0%
!! TGCTGGAAAGCGCCTTGAAA+TGG - chr2_4:35304882-35304901 Msa0326110:intron 50.0%
!! GAAAGCGCCTTGAAATGGCT+AGG - chr2_4:35304887-35304906 Msa0326110:intron 50.0%
TTCCTGCCCTAGCCATTTCA+AGG + chr2_4:35304897-35304916 None:intergenic 50.0%
GCAGGAATTGAACGTGCTCA+TGG - chr2_4:35304910-35304929 Msa0326110:intron 50.0%
CACCTTGTAAGAGTCTGAGG+CGG + chr2_4:35304948-35304967 None:intergenic 50.0%
GACCACCTTGTAAGAGTCTG+AGG + chr2_4:35304951-35304970 None:intergenic 50.0%
GAGACTAGAGCTGCTTGAAG+GGG - chr2_4:35305137-35305156 Msa0326110:intron 50.0%
GGCATTTCATTCTGGCCAGT+TGG - chr2_4:35305164-35305183 Msa0326110:intron 50.0%
CTGGCCAGTTGGAGAAATCA+AGG - chr2_4:35305175-35305194 Msa0326110:intron 50.0%
! TGAGCATGGGCTACACTCAA+AGG - chr2_4:35305756-35305775 Msa0326110:intron 50.0%
! GAGCATGGGCTACACTCAAA+GGG - chr2_4:35305757-35305776 Msa0326110:intron 50.0%
! ATCCACGGCCTTCTTTAAGG+GGG + chr2_4:35305998-35306017 None:intergenic 50.0%
GATCCACGGCCTTCTTTAAG+GGG + chr2_4:35305999-35306018 None:intergenic 50.0%
CAGATCCACGGCCTTCTTTA+AGG + chr2_4:35306001-35306020 None:intergenic 50.0%
CTTAAAGAAGGCCGTGGATC+TGG - chr2_4:35305999-35306018 Msa0326110:intron 50.0%
GTTCAGTCTCTCCAGATCCA+CGG + chr2_4:35306013-35306032 None:intergenic 50.0%
AAGACTGACAGCACAACCTG+AGG - chr2_4:35306640-35306659 Msa0326110:intron 50.0%
GGTTGCATATTCTCAGCCTC+AGG + chr2_4:35306659-35306678 None:intergenic 50.0%
AGAAAGGGATGTGGAGATGG+AGG - chr2_4:35306799-35306818 Msa0326110:intron 50.0%
CTGCAGACTCAACCATAGAC+AGG + chr2_4:35306913-35306932 None:intergenic 50.0%
CTGTCTATGGTTGAGTCTGC+AGG - chr2_4:35306911-35306930 Msa0326110:intron 50.0%
CGAGTGGAGTGATCGCAACA+TGG - chr2_4:35299732-35299751 Msa0326110:three_prime_UTR 55.0%
GACACTCCTCAGGTGTGTCT+AGG + chr2_4:35300230-35300249 None:intergenic 55.0%
ATGAAGCACGGACACTCCTC+AGG + chr2_4:35300240-35300259 None:intergenic 55.0%
!! CGTCGGTGTCGTGTTAGTGT+CGG - chr2_4:35300575-35300594 Msa0326110:intron 55.0%
TTCGGCGTGAGTAGTCAGCT+TGG - chr2_4:35301539-35301558 Msa0326110:intron 55.0%
CCAAAAGGGCTCCTCATGAG+AGG + chr2_4:35302971-35302990 None:intergenic 55.0%
! CCTCTCATGAGGAGCCCTTT+TGG - chr2_4:35302968-35302987 Msa0326110:intron 55.0%
CCGCCTTCAGTTGAAGGGTT+TGG + chr2_4:35303485-35303504 None:intergenic 55.0%
CTCCGCCTCAGACTCTTACA+AGG - chr2_4:35304943-35304962 Msa0326110:intron 55.0%
CGCCTCAGACTCTTACAAGG+TGG - chr2_4:35304946-35304965 Msa0326110:intron 55.0%
ACAAGGTGGTCGCTATCCAG+AGG - chr2_4:35304960-35304979 Msa0326110:intron 55.0%
ACTAGAGCTGCTTGAAGGGG+TGG - chr2_4:35305140-35305159 Msa0326110:intron 55.0%
! GGGGTGGTGGCATTTCATTC+TGG - chr2_4:35305156-35305175 Msa0326110:intron 55.0%
ACAGCTGCAAGTGCCAGATG+AGG - chr2_4:35305718-35305737 Msa0326110:intron 55.0%
TCCAGGGAGCAAAAGCGGTA+TGG - chr2_4:35305967-35305986 Msa0326110:intron 55.0%
CCAGGGAGCAAAAGCGGTAT+GGG - chr2_4:35305968-35305987 Msa0326110:intron 55.0%
CAGGGAGCAAAAGCGGTATG+GGG - chr2_4:35305969-35305988 Msa0326110:intron 55.0%
TGGGGTGACCCCCTTAAAGA+AGG - chr2_4:35305987-35306006 Msa0326110:intron 55.0%
!!! TGCAGTGGTCGCTGCTTTTG+AGG - chr2_4:35306589-35306608 Msa0326110:intron 55.0%
!!! GTGGTCGCTGCTTTTGAGGA+AGG - chr2_4:35306593-35306612 Msa0326110:intron 55.0%
!!! GTCGCTGCTTTTGAGGAAGG+CGG - chr2_4:35306596-35306615 Msa0326110:intron 55.0%
!! ATTAGCGGTGTCGGCGTGTC+CGG + chr2_4:35300159-35300178 None:intergenic 60.0%
GGAAAAGGGAGACCCCGCTA+AGG + chr2_4:35300287-35300306 None:intergenic 60.0%
GCGCGGACACTCCTCAGATA+AGG + chr2_4:35300631-35300650 None:intergenic 60.0%
GGAAAAGGGAGACCCCGCTA+AGG + chr2_4:35300287-35300306 None:intergenic 60.0%
CAGGGCAGCTGCAACTGCAT+TGG - chr2_4:35302206-35302225 Msa0326110:intron 60.0%
TAGAAGGATGGGGGTGGCAG+TGG - chr2_4:35303049-35303068 Msa0326110:intron 60.0%
CGCCTTGAAATGGCTAGGGC+AGG - chr2_4:35304892-35304911 Msa0326110:intron 60.0%
AGAGCTGCTTGAAGGGGTGG+TGG - chr2_4:35305143-35305162 Msa0326110:intron 60.0%
!! CCCATACCGCTTTTGCTCCC+TGG + chr2_4:35305971-35305990 None:intergenic 60.0%
GACCCCCTTAAAGAAGGCCG+TGG - chr2_4:35305993-35306012 Msa0326110:intron 60.0%
GGGCGTCCTAGACACACCTG+AGG - chr2_4:35300221-35300240 Msa0326110:CDS 65.0%
GATGGGGGTGGCAGTGGCAA+GGG - chr2_4:35303055-35303074 Msa0326110:intron 65.0%
ATGGGGGTGGCAGTGGCAAG+GGG - chr2_4:35303056-35303075 Msa0326110:intron 65.0%
GCAGTGGCAAGGGGTCCACT+TGG - chr2_4:35303065-35303084 Msa0326110:intron 65.0%
GGATGGGGGTGGCAGTGGCA+AGG - chr2_4:35303054-35303073 Msa0326110:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 35299664 35307313 35299664 ID=Msa0326110;Name=Msa0326110
chr2_4 mRNA 35299664 35307313 35299664 ID=Msa0326110-mRNA-1;Parent=Msa0326110;Name=Msa0326110-mRNA-1;_AED=0.10;_eAED=0.10;_QI=87|1|1|1|1|1|11|364|551
chr2_4 exon 35299664 35300383 35299664 ID=Msa0326110-mRNA-1:exon:11018;Parent=Msa0326110-mRNA-1
chr2_4 exon 35300481 35300574 35300481 ID=Msa0326110-mRNA-1:exon:11017;Parent=Msa0326110-mRNA-1
chr2_4 exon 35300646 35300748 35300646 ID=Msa0326110-mRNA-1:exon:11016;Parent=Msa0326110-mRNA-1
chr2_4 exon 35300928 35301005 35300928 ID=Msa0326110-mRNA-1:exon:11015;Parent=Msa0326110-mRNA-1
chr2_4 exon 35301074 35301255 35301074 ID=Msa0326110-mRNA-1:exon:11014;Parent=Msa0326110-mRNA-1
chr2_4 exon 35301744 35301846 35301744 ID=Msa0326110-mRNA-1:exon:11013;Parent=Msa0326110-mRNA-1
chr2_4 exon 35301988 35302175 35301988 ID=Msa0326110-mRNA-1:exon:11012;Parent=Msa0326110-mRNA-1
chr2_4 exon 35303695 35303730 35303695 ID=Msa0326110-mRNA-1:exon:11011;Parent=Msa0326110-mRNA-1
chr2_4 exon 35304421 35304517 35304421 ID=Msa0326110-mRNA-1:exon:11010;Parent=Msa0326110-mRNA-1
chr2_4 exon 35304646 35304768 35304646 ID=Msa0326110-mRNA-1:exon:11009;Parent=Msa0326110-mRNA-1
chr2_4 exon 35306931 35307313 35306931 ID=Msa0326110-mRNA-1:exon:11008;Parent=Msa0326110-mRNA-1
chr2_4 five_prime_UTR 35307227 35307313 35307227 ID=Msa0326110-mRNA-1:five_prime_utr;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35306931 35307226 35306931 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35304646 35304768 35304646 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35304421 35304517 35304421 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35303695 35303730 35303695 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35301988 35302175 35301988 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35301744 35301846 35301744 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35301074 35301255 35301074 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35300928 35301005 35300928 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35300646 35300748 35300646 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35300481 35300574 35300481 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 CDS 35300028 35300383 35300028 ID=Msa0326110-mRNA-1:cds;Parent=Msa0326110-mRNA-1
chr2_4 three_prime_UTR 35299664 35300027 35299664 ID=Msa0326110-mRNA-1:three_prime_utr;Parent=Msa0326110-mRNA-1
Gene Sequence

>Msa0326110

ATGGCGAAATTGAAGATAGCAGGAACATGGTCAGGTGTATTAGAAGAAGTCGATTTAGAGAATTGGACCATTTCTTCATTACGTGAAGAAGTTGCGAAGCGATCCAATTGCGATAATCCTCACTTCATTAACCTTATTTGTGCTGGTAGAATTCTCAAGGATGATAATCAAACCCTAACCCTAACCCAATTAGGTATCAAAAATAACTCCAAGATTCTCGCTACTGTCACTTCTCCTCAACAGGGTCAGTCTCTTGTTGTTGAGGAACAAAGCTCTCATAGGCTTGCTCGTATTAGGGCAGCTGCAACTGCATTGGCTGAAAGGCATGCAGATGGTTCATTACCTCTTGAAGACTTTAACATAGAAGTTGAAGATCAAAGTGGACAGAAAGTACGCTTAGGATCAGAGATTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTTTTATCAGAAAGGGAAATTACAAAGATGCACTTGAAGTGCTTACCATGGGAGAGGAGTCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTTCCAATACTGCAAATTGACATGGTATGGTGCTACTTCATGCTACGGGACATTAGATGGTTATCAGATGCTGGAAAGCGCCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTCTCCGCCTCAGACTCTTACAAGGTGGTCGCTATCCAGAGGTTGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATTTCATTCTGGCCAGTTGGAGAAATCAAGGCAAGCATTAGCCTCTGCAAAAGCGAAGTTTGTTCAGCTGCAAGTGCCAGATGAGGCCTTATCACTTGTTATGAGCATGGGCTACACTCAAAGGGATGCAAAGAGAGCACTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAAGATGAGGAAGATTTAAAAAGAAGAGATGAAATTAGGGAGCAAAAGCGGTATGGGGTGACCCCCTTAAAGAAGGCCGTGGATCTGGAGAGACTGAACGAATTGGTCACTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCTCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCAGAAACCAATTCTGATTTACAGGTTAAGATCGAGTCAAGGAAAAGGAAAAGACAGCAACAAGCAAAAGATTCTGCAATTGAAAAAATTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGTCGCTGCTTTTGAGGAAGGCGGCAATTTAGAAGAAGTATTGCAAAGACTGACAGCACAACCTGAGGCTGAGAATATGCAACCTCAAATGAATTCAACTGCTGCTTTTGATGGTATTGGAAGTTCATCTAACCCTTTACCAGAAAATGTTAATTCTGACATTCTAGACCAAATGAATGGGGTTGAAGATCACAATAAAACAGAAGAAAGGGATGTGGAGATGGAGGATGAGCTCTCTGCAGATATAGCTAAAGGAGATGCCTTTACTGATTATGACATTGAAGTTAATATTGAAGGGGAAGCCATAACTGAGTACCTGTCTATGGTTGAGTCTGCAGGCATTGCTTCCAAATAA

Protein sequence

>Msa0326110

MAKLKIAGTWSGVLEEVDLENWTISSLREEVAKRSNCDNPHFINLICAGRILKDDNQTLTLTQLGIKNNSKILATVTSPQQGQSLVVEEQSSHRLARIRAAATALAERHADGSLPLEDFNIEVEDQSGQKVRLGSEIDQRAVMMGLMLHAKGKRFIRKGNYKDALEVLTMGEESFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPEVALHLRLELLEGVVAFHSGQLEKSRQALASAKAKFVQLQVPDEALSLVMSMGYTQRDAKRALRMNNQDVGGAIDFLVEEKAKKMQKDEEDLKRRDEIREQKRYGVTPLKKAVDLERLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSDLQVKIESRKRKRQQQAKDSAIEKIVQMGFERSRVVAAFEEGGNLEEVLQRLTAQPEAENMQPQMNSTAAFDGIGSSSNPLPENVNSDILDQMNGVEDHNKTEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEAITEYLSMVESAGIASK*