AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0838610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838610 MtrunA17_Chr4g0038011 87.487 975 92 3 1 972 40 987 0.0 1723
Msa0838610 MtrunA17_Chr4g0038031 80.169 474 77 1 5 478 8 464 0.0 818
Msa0838610 MtrunA17_Chr4g0038031 71.642 201 47 1 774 974 445 635 2.56e-68 240
Msa0838610 MtrunA17_Chr3g0145961 33.854 833 460 21 13 821 86 851 1.55e-122 397
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838610 AT1G50200.1 70.534 974 255 5 4 972 55 1001 0.0 1382
Msa0838610 AT1G50200.2 69.959 982 255 6 4 972 55 1009 0.0 1377
Msa0838610 AT5G22800.2 34.892 834 451 22 13 821 108 874 3.59e-131 421
Msa0838610 AT5G22800.1 34.892 834 451 22 13 821 83 849 6.65e-131 419

Find 249 sgRNAs with CRISPR-Local

Find 813 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCATAATGTTCAAGTTTA+TGG 0.095893 5_4:+13049323 Msa0838610:CDS
AACATTTATGCTACTTATTT+TGG 0.136454 5_4:+13043672 Msa0838610:CDS
GAAGAACAATAGATCCTTTC+TGG 0.201321 5_4:-13049757 None:intergenic
CACCAGCTCGAATGCACTTC+TGG 0.208889 5_4:-13043390 None:intergenic
ACTGGTGCTCGGCCATATTC+TGG 0.216626 5_4:+13045685 Msa0838610:CDS
AAGGGTCTGCGGACTGTTTC+TGG 0.234343 5_4:+13049999 Msa0838610:CDS
TCTTTGGTCAGGAAAATTTC+TGG 0.242948 5_4:+13043911 Msa0838610:intron
ATGGAACCTTGTCTTTATTC+AGG 0.262339 5_4:+13044047 Msa0838610:CDS
GTTTCAAATTTGCTTGGTTC+AGG 0.270432 5_4:+13047853 Msa0838610:CDS
GACAGCTGTGGAACATGTTC+AGG 0.291996 5_4:+13046832 Msa0838610:CDS
TGCTCTTGATGCAATTAAAA+TGG 0.295903 5_4:+13050399 Msa0838610:CDS
ATCAAGAACTGCTCAAAATA+AGG 0.306307 5_4:+13047632 Msa0838610:CDS
CCAGTGTCAACGTGCTTTGC+AGG 0.310029 5_4:-13044255 None:intergenic
GAAAGGAGATAAAGGTAAAT+TGG 0.318522 5_4:+13052787 Msa0838610:CDS
AGCAATGTTTAATGATAAAC+AGG 0.319422 5_4:+13052694 Msa0838610:CDS
AATTGACTCAATTCTTCTTA+AGG 0.321886 5_4:-13049904 None:intergenic
ATGTATGGTTAGCGGCTATA+AGG 0.328806 5_4:-13049593 None:intergenic
CCTGGACGTGTTCTTCCCTT+TGG 0.334344 5_4:+13043762 Msa0838610:CDS
TGGTGATGTTGGTGTAATTC+TGG 0.341373 5_4:+13048602 Msa0838610:CDS
TGAGCAAATTAATGCTGAAT+TGG 0.344749 5_4:+13049932 Msa0838610:CDS
TCAGGAAAATTTCTGGGAAA+TGG 0.345759 5_4:+13043918 Msa0838610:intron
CTAGCACTTTACGTTGGCTT+TGG 0.346886 5_4:-13053811 None:intergenic
GGTCCGACTTTCCCAGAATA+TGG 0.356983 5_4:-13045697 None:intergenic
TAAACCCGGATAATTATTTC+CGG 0.361807 5_4:-13053626 None:intergenic
CTGTCATTTGCCATTGCTGA+TGG 0.364745 5_4:+13045778 Msa0838610:CDS
CTCTTCGAAGAACTTCAAAA+AGG 0.370514 5_4:-13042292 None:intergenic
TTTGAATTGTGGGATACATA+TGG 0.375692 5_4:+13047421 Msa0838610:CDS
GGCCAAGATGGCCCTACTTC+AGG 0.378146 5_4:+13052148 Msa0838610:CDS
AGTAGATGAAGCGGCTAAGC+TGG 0.382670 5_4:+13050441 Msa0838610:CDS
TCGTGCTTCACATTGGTAAT+GGG 0.382910 5_4:+13049351 Msa0838610:CDS
ATGTTGGGCAGCTGGTCTTT+TGG 0.385798 5_4:+13043472 Msa0838610:CDS
AGTTTGCCCAATCTAGTGTT+AGG 0.386296 5_4:-13043349 None:intergenic
ATGTCTCTGGACTCGTAGTC+AGG 0.387872 5_4:-13043720 None:intergenic
AGCAGAATAGCATCGAAAAT+AGG 0.394070 5_4:-13044348 None:intergenic
CTTTGGTCAGGAAAATTTCT+GGG 0.395767 5_4:+13043912 Msa0838610:intron
GAGTGGCTGAGTAATGCTTT+GGG 0.399075 5_4:+13052818 Msa0838610:CDS
TAGCACTTTACGTTGGCTTT+GGG 0.400445 5_4:-13053810 None:intergenic
ACTCCATCTGCATTGAGATA+TGG 0.403780 5_4:+13044028 Msa0838610:CDS
ATAGGTAGCGTTTGAATTGT+GGG 0.406155 5_4:+13047411 Msa0838610:intron
TTCTCATGTTGATGTTGGCC+TGG 0.406787 5_4:+13052429 Msa0838610:CDS
TGTTGATCCTAACACTAGAT+TGG 0.408359 5_4:+13043342 Msa0838610:CDS
AATGTAGGTTTATCCTGATC+CGG 0.410601 5_4:+13050096 Msa0838610:intron
CAAGAGGAGGAGGAAAGTTT+CGG 0.410641 5_4:+13046664 Msa0838610:CDS
TTCGTGCTTCACATTGGTAA+TGG 0.413069 5_4:+13049350 Msa0838610:CDS
GCATCAACAAGTCGATTTCT+CGG 0.413075 5_4:-13053533 None:intergenic
CTTAAGGAATCAGCATCAAC+AGG 0.414659 5_4:-13049888 None:intergenic
AGAGTGGCTGAGTAATGCTT+TGG 0.418202 5_4:+13052817 Msa0838610:CDS
AACAGCAGCAAGAGCACATT+AGG 0.421486 5_4:+13046632 Msa0838610:CDS
CTATGCTGAGCAAGGTGGTC+AGG 0.422720 5_4:+13048638 Msa0838610:CDS
TTTCAGATACTTGATTTGCT+TGG 0.425755 5_4:+13046893 Msa0838610:CDS
AAGTGTTGTGGCAAATGTGC+TGG 0.430083 5_4:+13046588 Msa0838610:CDS
AACAAGGTTGTAGTTTGTGC+TGG 0.431318 5_4:+13052755 Msa0838610:CDS
TCCACCTCCGGCGTCATGTC+AGG 0.434003 5_4:+13042231 Msa0838610:exon
ATTTCAGCTTTCTTAGCAGC+AGG 0.441476 5_4:-13052122 None:intergenic
TACCTGAAGTAGGGCCATCT+TGG 0.443045 5_4:-13052150 None:intergenic
TTGAATTGTGGGATACATAT+GGG 0.443063 5_4:+13047422 Msa0838610:CDS
TGTATGGTTAGCGGCTATAA+GGG 0.450030 5_4:-13049592 None:intergenic
ACCCTTGATACGCATGGCTT+CGG 0.450138 5_4:-13049982 None:intergenic
TATAGGTAGCGTTTGAATTG+TGG 0.450971 5_4:+13047410 Msa0838610:intron
GCGTTAGCAAAGAGGAGAGT+AGG 0.452058 5_4:-13042363 None:intergenic
ATAAAATTGACATGGCATAC+AGG 0.452723 5_4:+13045731 Msa0838610:CDS
TTAAACAAGAAGCCATTAGC+TGG 0.452886 5_4:+13043503 Msa0838610:CDS
TTTCGGCAGAACCTTAGTTA+AGG 0.454210 5_4:+13046681 Msa0838610:CDS
TGCCGAAGCCATGCGTATCA+AGG 0.455197 5_4:+13049980 Msa0838610:CDS
ACCAGCTCGAATGCACTTCT+GGG 0.457402 5_4:-13043389 None:intergenic
AAGTTCCCATGCCCAGCTAA+TGG 0.458940 5_4:-13043515 None:intergenic
CAGGAAAATTTCTGGGAAAT+GGG 0.459057 5_4:+13043919 Msa0838610:intron
GTGTCGGAGAAAGGAGATAA+AGG 0.459986 5_4:+13052779 Msa0838610:CDS
TCCTGACATGACGCCGGAGG+TGG 0.460223 5_4:-13042232 None:intergenic
AAACTTTAACCATATGTCTC+TGG 0.460356 5_4:-13043733 None:intergenic
TGTAAGGATTACAGCTGAAA+AGG 0.463474 5_4:+13052369 Msa0838610:CDS
TAACGCCGGAAATAATTATC+CGG 0.465940 5_4:+13053621 Msa0838610:three_prime_UTR
CTGGTGCTCGGCCATATTCT+GGG 0.468254 5_4:+13045686 Msa0838610:CDS
GTTGATCCTAACACTAGATT+GGG 0.468358 5_4:+13043343 Msa0838610:CDS
TGCATTTCTCATGTTGATGT+TGG 0.470612 5_4:+13052424 Msa0838610:CDS
AAAACAAATGCAAAGCTGTA+AGG 0.471642 5_4:+13052353 Msa0838610:CDS
ATGATAGTTTCAAATTTGCT+TGG 0.474087 5_4:+13047847 Msa0838610:CDS
GTAACACATTTACAGGCAAC+TGG 0.475309 5_4:+13045667 Msa0838610:intron
TCTTCTCTCCATTCCACCTC+CGG 0.475733 5_4:+13042219 Msa0838610:five_prime_UTR
TAATTGAAGGAAAGATGAAT+AGG 0.475962 5_4:-13053751 None:intergenic
GGGAGATGTGGTAAAGGAAA+AGG 0.476017 5_4:+13052851 Msa0838610:CDS
GACACAACTCTAGCCGGATC+AGG 0.476857 5_4:-13050109 None:intergenic
GTAACATGTGTGTGCATGTA+TGG 0.480970 5_4:-13049608 None:intergenic
GTCAACGTGCTTTGCAGGCA+GGG 0.481293 5_4:-13044250 None:intergenic
GGGTTGTTGCGGATCACATC+AGG 0.482984 5_4:+13045752 Msa0838610:CDS
TTTCAAATTTGCTTGGTTCA+GGG 0.485471 5_4:+13047854 Msa0838610:CDS
TGTCAACGTGCTTTGCAGGC+AGG 0.486337 5_4:-13044251 None:intergenic
TATACACAGCTAGTAAGATA+CGG 0.488635 5_4:-13053686 None:intergenic
TAAGCTGGAAGGAAGTTTGC+TGG 0.490814 5_4:+13050456 Msa0838610:CDS
TGTGCTGGGGTGTCGGAGAA+AGG 0.492016 5_4:+13052770 Msa0838610:CDS
AGGAGGTCTTGTGACGGGTC+AGG 0.493936 5_4:+13052871 Msa0838610:CDS
GAGGAGAGTAGGGTCATTGA+AGG 0.494575 5_4:-13042352 None:intergenic
GTTGATTCTGTTAATACTGA+TGG 0.494916 5_4:+13048582 Msa0838610:CDS
TTGTGACAGCTGTTATTCTA+CGG 0.496737 5_4:-13050369 None:intergenic
TGTCATTTGCCATTGCTGAT+GGG 0.498811 5_4:+13045779 Msa0838610:CDS
CAACATATAATACCTGAAGT+AGG 0.498903 5_4:-13052160 None:intergenic
CACGAACTGCTGCAACATCC+AGG 0.499765 5_4:-13052447 None:intergenic
GCTGAGGAGGGAATTGCTAA+AGG 0.500043 5_4:+13050343 Msa0838610:CDS
ACATGACGCCGGAGGTGGAA+TGG 0.500538 5_4:-13042227 None:intergenic
GTTAATACTGATGGTGATGT+TGG 0.502082 5_4:+13048591 Msa0838610:CDS
TGATGAATGCAGGAAGTACT+TGG 0.502247 5_4:+13049722 Msa0838610:intron
TTCAGGGGAACGTACTGAGC+GGG 0.503019 5_4:+13046849 Msa0838610:CDS
TCTGAATGATTTATATCCAC+AGG 0.503684 5_4:-13053571 None:intergenic
TTTGCATAGACTTTCGATGT+TGG 0.504113 5_4:+13049269 Msa0838610:intron
TGCTAAGAAAGCTGAAATCA+AGG 0.509077 5_4:+13052127 Msa0838610:CDS
CTCCGTCGAGCTGTTCGCTA+TGG 0.511679 5_4:+13046254 Msa0838610:CDS
CTACCTGTGTGAGATCTAAC+GGG 0.513935 5_4:-13047447 None:intergenic
GTCTATCCTCACCTTAACTA+AGG 0.519096 5_4:-13046692 None:intergenic
AACGCCGGAAATAATTATCC+GGG 0.519643 5_4:+13053622 Msa0838610:three_prime_UTR
GTGGTAAAAGCAATATATAC+TGG 0.521169 5_4:+13048549 Msa0838610:CDS
TGTTACTGTCAGCAAGTTGG+TGG 0.522495 5_4:+13047762 Msa0838610:intron
GTGGATATAAATCATTCAGA+AGG 0.525019 5_4:+13053574 Msa0838610:three_prime_UTR
TATAAATCATTCAGAAGGGA+AGG 0.525135 5_4:+13053579 Msa0838610:three_prime_UTR
GAACATACTTTACAGCCAAA+GGG 0.526626 5_4:-13043777 None:intergenic
AAGAAGCCATTAGCTGGGCA+TGG 0.527805 5_4:+13043509 Msa0838610:CDS
ATGCTTTGGGGTCACTGAAA+GGG 0.529281 5_4:+13052831 Msa0838610:CDS
TTCTGGGAAATGGGTGACAC+AGG 0.529618 5_4:+13043928 Msa0838610:CDS
CGCAAAATGATCTATCATGA+AGG 0.530253 5_4:-13053894 None:intergenic
ATTGCTGATGGGTCTCGTCC+CGG 0.532789 5_4:+13045790 Msa0838610:CDS
GTATCTCTCACGCGCTTCGC+CGG 0.533290 5_4:-13042270 None:intergenic
TAAACAAGAAGCCATTAGCT+GGG 0.537126 5_4:+13043504 Msa0838610:CDS
AGGAACCGACATTGAGTGGC+CGG 0.537230 5_4:+13042251 Msa0838610:CDS
AATTTGAAACTATCATCTGT+TGG 0.537269 5_4:-13047840 None:intergenic
AGAACATACTTTACAGCCAA+AGG 0.538832 5_4:-13043778 None:intergenic
CCTACCTGTGTGAGATCTAA+CGG 0.539043 5_4:-13047448 None:intergenic
ATGTCTAACCACAGTTCAGT+AGG 0.539072 5_4:+13044205 Msa0838610:intron
AACATATAATACCTGAAGTA+GGG 0.539900 5_4:-13052159 None:intergenic
GGAAGGAAGTTTGCTGGATG+AGG 0.540536 5_4:+13050462 Msa0838610:CDS
AATGCTTTGGGGTCACTGAA+AGG 0.543277 5_4:+13052830 Msa0838610:CDS
CCTGCAAAGCACGTTGACAC+TGG 0.543375 5_4:+13044255 Msa0838610:CDS
GAACTTGAAATGAAGCATGT+TGG 0.543494 5_4:-13049304 None:intergenic
TAACCAAAGACGCGGCATCT+CGG 0.543926 5_4:-13043996 None:intergenic
AGGAGAGTAGGGTCATTGAA+GGG 0.545511 5_4:-13042351 None:intergenic
CGTTAGCAAAGAGGAGAGTA+GGG 0.548303 5_4:-13042362 None:intergenic
CCAACTGACACAACTCTAGC+CGG 0.548858 5_4:-13050115 None:intergenic
ACCCAGAAGTGCATTCGAGC+TGG 0.549128 5_4:+13043388 Msa0838610:CDS
CTTCACATTGGTAATGGGAC+TGG 0.552145 5_4:+13049356 Msa0838610:CDS
TTTGGTGGTGATGATAAAGC+TGG 0.555876 5_4:+13043690 Msa0838610:CDS
CTGAAAGGGAGATGTGGTAA+AGG 0.558294 5_4:+13052845 Msa0838610:CDS
TGTAGTTTGTGCTGGGGTGT+CGG 0.558316 5_4:+13052763 Msa0838610:CDS
ACAAGGTTGTAGTTTGTGCT+GGG 0.558406 5_4:+13052756 Msa0838610:CDS
TGTCTCTGGACTCGTAGTCA+GGG 0.559464 5_4:-13043719 None:intergenic
AGCTGAAATCAAGGCCAAGA+TGG 0.559778 5_4:+13052136 Msa0838610:CDS
CCGGCTAGAGTTGTGTCAGT+TGG 0.560215 5_4:+13050115 Msa0838610:CDS
ACAGCTGTGGAACATGTTCA+GGG 0.561456 5_4:+13046833 Msa0838610:CDS
CGACGTATTAAAAGCTGAAG+AGG 0.562921 5_4:+13046280 Msa0838610:CDS
CTTCGCCGGCCACTCAATGT+CGG 0.563252 5_4:-13042256 None:intergenic
TAAACAGGGGTTATCAGTGA+TGG 0.563816 5_4:+13052709 Msa0838610:CDS
AATGGGACTGGTATCTCTGT+TGG 0.564833 5_4:+13049368 Msa0838610:CDS
CATGGCATACAGGGTTGTTG+CGG 0.565636 5_4:+13045741 Msa0838610:CDS
TCAAAATGAATTTCTGTACA+AGG 0.566846 5_4:-13043961 None:intergenic
CAACTACAAGTTGATGTCGA+AGG 0.567680 5_4:+13047576 Msa0838610:CDS
CCAAAGGGAAGAACACGTCC+AGG 0.567955 5_4:-13043762 None:intergenic
GCATGTGATTCAAGAGGAGG+AGG 0.569350 5_4:+13046654 Msa0838610:CDS
GGCAAACATGTATACCAGAA+AGG 0.569840 5_4:+13049743 Msa0838610:CDS
ATCTTTCCTTCAATTATCAG+AGG 0.570108 5_4:+13053758 Msa0838610:three_prime_UTR
TCTATTTCATCTGAATTGTG+TGG 0.570785 5_4:+13050187 Msa0838610:CDS
ATACACAGCTAGTAAGATAC+GGG 0.572074 5_4:-13053685 None:intergenic
TGATGCATCACGCATAAATG+AGG 0.574360 5_4:+13053483 Msa0838610:CDS
TAAAATTGACATGGCATACA+GGG 0.576644 5_4:+13045732 Msa0838610:CDS
GGAAAAGGAGGTCTTGTGAC+GGG 0.576952 5_4:+13052866 Msa0838610:CDS
GCCGAAGCCATGCGTATCAA+GGG 0.577052 5_4:+13049981 Msa0838610:CDS
TGAGCAGCAAGTAGATGAAG+CGG 0.577455 5_4:+13050432 Msa0838610:CDS
CATAATGTTCAAGTTTATGG+AGG 0.577824 5_4:+13049326 Msa0838610:CDS
ACTACGAGTCCAGAGACATA+TGG 0.578092 5_4:+13043724 Msa0838610:CDS
TCTTTCCTTCAATTATCAGA+GGG 0.578638 5_4:+13053759 Msa0838610:three_prime_UTR
CGGCCATATTCTGGGAAAGT+CGG 0.580129 5_4:+13045694 Msa0838610:CDS
GTTCCATATCTCAATGCAGA+TGG 0.580307 5_4:-13044031 None:intergenic
GCTGATCTAGCTGTTAAAGA+TGG 0.581410 5_4:+13052391 Msa0838610:CDS
AAGCACGTTGACACTGGCAT+GGG 0.581424 5_4:+13044261 Msa0838610:CDS
AGAAGCCATTAGCTGGGCAT+GGG 0.583711 5_4:+13043510 Msa0838610:CDS
ACATTTCAAAATAAGTGTGA+TGG 0.584569 5_4:-13043453 None:intergenic
CAGGGATTTAAGAGAGCCAT+CGG 0.586238 5_4:-13044232 None:intergenic
ATCACGCATAAATGAGGCTA+TGG 0.587205 5_4:+13053489 Msa0838610:CDS
GATGAAGCGGCTAAGCTGGA+AGG 0.587596 5_4:+13050445 Msa0838610:CDS
GTAGCATAAATGTTGTCTGA+TGG 0.588340 5_4:-13043663 None:intergenic
CACTGAGGAATCTACAAACA+AGG 0.589743 5_4:+13052739 Msa0838610:CDS
AAAGCACGTTGACACTGGCA+TGG 0.589998 5_4:+13044260 Msa0838610:CDS
TGTCAGGAACCGACATTGAG+TGG 0.592532 5_4:+13042247 Msa0838610:CDS
ATTTACAGGCAACTGGTGCT+CGG 0.594779 5_4:+13045674 Msa0838610:intron
AGATGTGGTAAAGGAAAAGG+AGG 0.595385 5_4:+13052854 Msa0838610:CDS
CAGAAGTGCATTCGAGCTGG+TGG 0.598259 5_4:+13043391 Msa0838610:CDS
TTCTGGGAAAGTCGGACCAA+GGG 0.599667 5_4:+13045702 Msa0838610:CDS
AGTGTTGTGGCAAATGTGCT+GGG 0.603198 5_4:+13046589 Msa0838610:CDS
TTGGATGTAAATGCAAAGGA+GGG 0.603719 5_4:+13049951 Msa0838610:CDS
ACTCTCCTCTTTGCTAACGC+CGG 0.603866 5_4:+13042366 Msa0838610:CDS
TTGAAGTAATCTGTTAACGC+CGG 0.604455 5_4:+13053607 Msa0838610:three_prime_UTR
GTGGAATGGAGAGAAGAGAT+CGG 0.605780 5_4:-13042213 None:intergenic
TTTCGTTCTCAGGGTCAGCA+AGG 0.607814 5_4:-13050156 None:intergenic
TGGCAACAAAGTAGTATGCA+AGG 0.607863 5_4:+13049388 Msa0838610:CDS
CCGCAGACCCTTGATACGCA+TGG 0.609092 5_4:-13049988 None:intergenic
GGAGAGTAGGGTCATTGAAG+GGG 0.610058 5_4:-13042350 None:intergenic
ATAATGCTCTTGTATAAACC+CGG 0.611027 5_4:-13053640 None:intergenic
TGTCTAACCACAGTTCAGTA+GGG 0.613871 5_4:+13044206 Msa0838610:intron
GATACGGGTATCCGTTGGTG+TGG 0.617383 5_4:-13053670 None:intergenic
TGGATATAAATCATTCAGAA+GGG 0.618095 5_4:+13053575 Msa0838610:three_prime_UTR
GGAGGTTTCGTGCTTCACAT+TGG 0.619470 5_4:+13049344 Msa0838610:CDS
TGCGAAATTTAAGACAGCTG+TGG 0.620526 5_4:+13046820 Msa0838610:CDS
AGTTGGTGGTGCTATTGTCA+TGG 0.620882 5_4:+13047776 Msa0838610:CDS
GTCCATAGCGAACAGCTCGA+CGG 0.621482 5_4:-13046256 None:intergenic
ACAAGCTTCTATGCTGAGCA+AGG 0.625524 5_4:+13048630 Msa0838610:CDS
ATTGGATGTAAATGCAAAGG+AGG 0.628352 5_4:+13049950 Msa0838610:CDS
GTCTTAGGACCATGAGAGTG+TGG 0.631834 5_4:+13048530 Msa0838610:intron
TCAGGGGAACGTACTGAGCG+GGG 0.634186 5_4:+13046850 Msa0838610:CDS
GTGTGTGCATGTATGGTTAG+CGG 0.634249 5_4:-13049601 None:intergenic
GGGACGAGACCCATCAGCAA+TGG 0.635525 5_4:-13045788 None:intergenic
GACGTATTAAAAGCTGAAGA+GGG 0.636943 5_4:+13046281 Msa0838610:CDS
CAATGATGTATATTCTCCTG+TGG 0.640340 5_4:+13053555 Msa0838610:three_prime_UTR
ATAAATCATTCAGAAGGGAA+GGG 0.640871 5_4:+13053580 Msa0838610:three_prime_UTR
TAGGCATGTGATTCAAGAGG+AGG 0.642062 5_4:+13046651 Msa0838610:CDS
ATTTCATCTGAATTGTGTGG+CGG 0.642488 5_4:+13050190 Msa0838610:CDS
AGTGGCTGAGTAATGCTTTG+GGG 0.644347 5_4:+13052819 Msa0838610:CDS
GTCGGTTCCTGACATGACGC+CGG 0.645395 5_4:-13042238 None:intergenic
ATTCTGGGAAAGTCGGACCA+AGG 0.646320 5_4:+13045701 Msa0838610:CDS
TTATTAATCATCCACACCAA+CGG 0.646378 5_4:+13053659 Msa0838610:three_prime_UTR
CACAACGATCTTGACGACGT+GGG 0.646477 5_4:+13043418 Msa0838610:CDS
AGTAAGATACGGGTATCCGT+TGG 0.647642 5_4:-13053675 None:intergenic
GTGTCACTAGCACTTTACGT+TGG 0.648960 5_4:-13053817 None:intergenic
TGAATTGGATGTAAATGCAA+AGG 0.649794 5_4:+13049947 Msa0838610:CDS
CATTAGGCATGTGATTCAAG+AGG 0.650394 5_4:+13046648 Msa0838610:CDS
GTCATTATTAACCAAAGACG+CGG 0.655004 5_4:-13044004 None:intergenic
GGGTCACTGAAAGGGAGATG+TGG 0.655092 5_4:+13052839 Msa0838610:CDS
AGGAAAAGGAGGTCTTGTGA+CGG 0.658982 5_4:+13052865 Msa0838610:CDS
GCACAACGATCTTGACGACG+TGG 0.662521 5_4:+13043417 Msa0838610:CDS
GGATGTTGCAGCAGTTCGTG+AGG 0.665110 5_4:+13052450 Msa0838610:CDS
CAGTTCAGTAGGGAGGCCGA+TGG 0.666367 5_4:+13044216 Msa0838610:intron
CAAGGTTGTAGTTTGTGCTG+GGG 0.666393 5_4:+13052757 Msa0838610:CDS
ATGGGTGACACAGGTCCGTG+TGG 0.668329 5_4:+13043937 Msa0838610:CDS
AGGGTCATTGAAGGGGACGA+CGG 0.669299 5_4:-13042343 None:intergenic
GGATGCAGATAAAATTGACA+TGG 0.670809 5_4:+13045723 Msa0838610:CDS
GGTTCCTGACATGACGCCGG+AGG 0.675553 5_4:-13042235 None:intergenic
ATTTCTGTACAAGGTCCACA+CGG 0.677167 5_4:-13043952 None:intergenic
AATCAGGCTTGTAAGTGTTG+TGG 0.679087 5_4:+13046576 Msa0838610:intron
ACATATTTCAAACACACGAG+AGG 0.690196 5_4:+13050300 Msa0838610:CDS
AAGGGAAGAACACGTCCAGG+AGG 0.692145 5_4:-13043759 None:intergenic
AAATAACCTGAATAAAGACA+AGG 0.695023 5_4:-13044053 None:intergenic
GGGGAACGTACTGAGCGGGG+AGG 0.695954 5_4:+13046853 Msa0838610:CDS
AAAGATGAATAGGACAGACA+AGG 0.697668 5_4:-13053741 None:intergenic
GCAATGTTTAATGATAAACA+GGG 0.700910 5_4:+13052695 Msa0838610:CDS
AGCTTCTATGCTGAGCAAGG+TGG 0.702055 5_4:+13048633 Msa0838610:CDS
CAATGTTTAATGATAAACAG+GGG 0.703838 5_4:+13052696 Msa0838610:CDS
CAGCTGTGGAACATGTTCAG+GGG 0.704327 5_4:+13046834 Msa0838610:CDS
TGGATGTAAATGCAAAGGAG+GGG 0.709884 5_4:+13049952 Msa0838610:CDS
CCATGCGTATCAAGGGTCTG+CGG 0.712151 5_4:+13049988 Msa0838610:CDS
GTTCAGGGGAACGTACTGAG+CGG 0.716267 5_4:+13046848 Msa0838610:CDS
CTAACCACAGTTCAGTAGGG+AGG 0.721171 5_4:+13044209 Msa0838610:intron
GAATGGAGAGAAGAGATCGG+CGG 0.723120 5_4:-13042210 None:intergenic
GTAAATTGGATGTATCAGAG+TGG 0.743531 5_4:+13052801 Msa0838610:CDS
GTTCCCGTTAGATCTCACAC+AGG 0.766218 5_4:+13047444 Msa0838610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAAAAAACAATTTTATTT+AGG + chr5_4:13043085-13043104 Msa0838610:intron 10.0%
!! AATTAAATTATAAAGAAAAG+TGG - chr5_4:13045264-13045283 None:intergenic 10.0%
!!! AAAGGTATAAAATATATTTT+GGG - chr5_4:13045385-13045404 None:intergenic 10.0%
!!! AATTTTCTTACATTTATTAA+TGG + chr5_4:13046001-13046020 Msa0838610:intron 10.0%
!!! TTAGTTACTTATTTTATAAT+TGG + chr5_4:13046935-13046954 Msa0838610:intron 10.0%
!!! TAGTTACTTATTTTATAATT+GGG + chr5_4:13046936-13046955 Msa0838610:intron 10.0%
!!! TTGTTTGTTTTAATATTAAA+TGG - chr5_4:13046978-13046997 None:intergenic 10.0%
!! ATGATATTATAACTATATAT+AGG - chr5_4:13052285-13052304 None:intergenic 10.0%
!!! ATTTTGATTTTCATTTTAGA+CGG - chr5_4:13042566-13042585 None:intergenic 15.0%
!!! ATTTTTATTAGAAAAACACA+AGG - chr5_4:13043809-13043828 None:intergenic 15.0%
!!! AAGTAGACAATTTTTATTTT+GGG - chr5_4:13044124-13044143 None:intergenic 15.0%
!! AGATTACATAATATTAAACT+AGG - chr5_4:13044610-13044629 None:intergenic 15.0%
!!! CAAAGGTATAAAATATATTT+TGG - chr5_4:13045386-13045405 None:intergenic 15.0%
!!! CAAAATATATTTTATACCTT+TGG + chr5_4:13045384-13045403 Msa0838610:intron 15.0%
!!! GTTTATCCTTTAATTTTATT+AGG - chr5_4:13047685-13047704 None:intergenic 15.0%
!!! TATTTTATTTTGTGACTATA+AGG - chr5_4:13048025-13048044 None:intergenic 15.0%
!! ATTGAAGTGAAAAAAAAAAA+AGG + chr5_4:13048352-13048371 Msa0838610:intron 15.0%
!! TTGAAGTGAAAAAAAAAAAA+GGG + chr5_4:13048353-13048372 Msa0838610:intron 15.0%
!!! ATTTGCTTTAATTTAATTGA+AGG + chr5_4:13048710-13048729 Msa0838610:intron 15.0%
!!! TGTTTTTTAATTATTTTTGC+AGG + chr5_4:13049551-13049570 Msa0838610:intron 15.0%
!! ATAGTGAATAAAAACTATTA+AGG - chr5_4:13049849-13049868 None:intergenic 15.0%
!!! TTGTAAAGGATTTTTTTAAA+TGG - chr5_4:13051152-13051171 None:intergenic 15.0%
!!! ATTTTAGGAAATAAAAATGA+AGG + chr5_4:13051804-13051823 Msa0838610:intron 15.0%
!!! TTTTAGGAAATAAAAATGAA+GGG + chr5_4:13051805-13051824 Msa0838610:intron 15.0%
!! TATAATATCATAATTCTTGT+AGG + chr5_4:13052294-13052313 Msa0838610:intron 15.0%
!! ATAATTTATTAAGAATCTTG+CGG + chr5_4:13052513-13052532 Msa0838610:intron 15.0%
!!! TTTAATGTATAAAATGCTTT+TGG + chr5_4:13052577-13052596 Msa0838610:intron 15.0%
!! TAAAATGACATAAAATGAAA+TGG - chr5_4:13052943-13052962 None:intergenic 15.0%
!!! ATTTCATTTTATGTCATTTT+AGG + chr5_4:13052942-13052961 Msa0838610:intron 15.0%
!! ATTTATAAACGACTTATATT+TGG + chr5_4:13053015-13053034 Msa0838610:intron 15.0%
!! TCAAAATATATGTAACTATG+AGG + chr5_4:13042579-13042598 Msa0838610:intron 20.0%
!! TTGAAAAATGTTGATCAATT+AGG - chr5_4:13042927-13042946 None:intergenic 20.0%
!! TGAATTGATAAAACATACTT+GGG - chr5_4:13043545-13043564 None:intergenic 20.0%
!! TTGAATTGATAAAACATACT+TGG - chr5_4:13043546-13043565 None:intergenic 20.0%
!!! AACATTTATGCTACTTATTT+TGG + chr5_4:13043672-13043691 Msa0838610:CDS 20.0%
!!! CAAGTAGACAATTTTTATTT+TGG - chr5_4:13044125-13044144 None:intergenic 20.0%
!! ATATAAGATACAAATTCCAT+TGG - chr5_4:13044175-13044194 None:intergenic 20.0%
!!! ATTCTGGTTTAAAATGTATA+TGG - chr5_4:13044410-13044429 None:intergenic 20.0%
!! TATGTAATCTATTATATGTG+TGG + chr5_4:13044620-13044639 Msa0838610:intron 20.0%
!! AATTTGGAAATATGTTAAAC+TGG - chr5_4:13044852-13044871 None:intergenic 20.0%
!! AACATATTTCCAAATTTATC+TGG + chr5_4:13044856-13044875 Msa0838610:intron 20.0%
!!! AAACTTGAAAGAATTTTCAA+TGG - chr5_4:13045206-13045225 None:intergenic 20.0%
!!! AAGTGGTTGTTATATTTTAA+TGG - chr5_4:13045247-13045266 None:intergenic 20.0%
!!! GTATAAAATATATTTTGGGA+AGG - chr5_4:13045381-13045400 None:intergenic 20.0%
!! ATATTCATATTCCGAATTAT+TGG + chr5_4:13045550-13045569 Msa0838610:intron 20.0%
!! AATGTAAGAAAATTGTTAAG+TGG - chr5_4:13045995-13046014 None:intergenic 20.0%
!! ATGAAATCATAACAAACTTA+TGG - chr5_4:13046190-13046209 None:intergenic 20.0%
!!! GTTATGATTTCATATTTTGA+AGG + chr5_4:13046197-13046216 Msa0838610:intron 20.0%
!!! ACGAGTTTTAGATATTTAAA+TGG - chr5_4:13046406-13046425 None:intergenic 20.0%
!!! GAGTTATTTTTGTTTTGTAA+AGG + chr5_4:13046761-13046780 Msa0838610:intron 20.0%
!!! TTTGTTTTGTAAAGGAATAA+AGG + chr5_4:13046769-13046788 Msa0838610:intron 20.0%
!! AAGTTGTACATGATAAATTA+CGG - chr5_4:13047237-13047256 None:intergenic 20.0%
!!! TTAGTTTAGTAGTTTTTTGA+TGG + chr5_4:13047351-13047370 Msa0838610:intron 20.0%
!!! TAGTTTAGTAGTTTTTTGAT+GGG + chr5_4:13047352-13047371 Msa0838610:intron 20.0%
!! AACACACCTAATAAAATTAA+AGG + chr5_4:13047676-13047695 Msa0838610:intron 20.0%
!! ACCATTGAAAATATAAATAC+TGG + chr5_4:13047709-13047728 Msa0838610:intron 20.0%
!!! ACCAGTATTTATATTTTCAA+TGG - chr5_4:13047713-13047732 None:intergenic 20.0%
!!! TTTTTTTTTCACTTCAATAG+CGG - chr5_4:13048350-13048369 None:intergenic 20.0%
!!! TTGTTTGCAATAATTGATTT+TGG + chr5_4:13048938-13048957 Msa0838610:intron 20.0%
!! TCGTAGTAATTTAATAAAAG+AGG + chr5_4:13049118-13049137 Msa0838610:intron 20.0%
!! CGTAGTAATTTAATAAAAGA+GGG + chr5_4:13049119-13049138 Msa0838610:intron 20.0%
!!! AAGAGGTTTTTATGTAAAAA+GGG - chr5_4:13049481-13049500 None:intergenic 20.0%
!!! AAAGAGGTTTTTATGTAAAA+AGG - chr5_4:13049482-13049501 None:intergenic 20.0%
!! AATAATTCTTACAGTCTTAA+TGG - chr5_4:13049824-13049843 None:intergenic 20.0%
!! TCAATATTCTACTTTAATGT+AGG + chr5_4:13050081-13050100 Msa0838610:intron 20.0%
!!! ACAAACATTTTCTTGTTTTT+TGG + chr5_4:13050675-13050694 Msa0838610:intron 20.0%
!!! CATTCTTTGAAAATATGAAA+TGG + chr5_4:13050857-13050876 Msa0838610:intron 20.0%
!! TATGATATAAAATTTGACAC+AGG + chr5_4:13051301-13051320 Msa0838610:intron 20.0%
!! ATGATATAAAATTTGACACA+GGG + chr5_4:13051302-13051321 Msa0838610:intron 20.0%
!!! AGACCTAATAAGTTTTTTAA+CGG + chr5_4:13051337-13051356 Msa0838610:intron 20.0%
!!! TAATTCTCAATGAGAATTTT+AGG + chr5_4:13051789-13051808 Msa0838610:intron 20.0%
!!! CAATAAAAAGTATACAAAAG+TGG - chr5_4:13052227-13052246 None:intergenic 20.0%
!! GTATATTATATACAAATCCA+TGG - chr5_4:13053049-13053068 None:intergenic 20.0%
!! AACTAAAACTGATATTACAT+TGG - chr5_4:13053088-13053107 None:intergenic 20.0%
!!! TAGTCATTTTGAATTTCTTA+TGG + chr5_4:13053328-13053347 Msa0838610:intron 20.0%
!!! ATTTGATGATAGAAATATTC+AGG - chr5_4:13053372-13053391 None:intergenic 20.0%
!!! TGTCCCATATTTTTTTACAT+CGG - chr5_4:13042522-13042541 None:intergenic 25.0%
! TCTAAAAAATATAGCTGTGT+CGG - chr5_4:13042699-13042718 None:intergenic 25.0%
!!! AACAATTTTATTTAGGACAC+CGG + chr5_4:13043092-13043111 Msa0838610:intron 25.0%
! ACATTTCAAAATAAGTGTGA+TGG - chr5_4:13043456-13043475 None:intergenic 25.0%
!!! TCACACTTATTTTGAAATGT+TGG + chr5_4:13043456-13043475 Msa0838610:CDS 25.0%
!!! CACACTTATTTTGAAATGTT+GGG + chr5_4:13043457-13043476 Msa0838610:CDS 25.0%
!!! ATTTATGCTACTTATTTTGG+TGG + chr5_4:13043675-13043694 Msa0838610:CDS 25.0%
! TAAAGCTGTACTATAACATA+AGG - chr5_4:13043833-13043852 None:intergenic 25.0%
! TCTAATTAGATGTGTATCTT+TGG + chr5_4:13043895-13043914 Msa0838610:intron 25.0%
! TCAAAATGAATTTCTGTACA+AGG - chr5_4:13043964-13043983 None:intergenic 25.0%
!!! GAAATTCATTTTGACAGAAT+TGG + chr5_4:13043970-13043989 Msa0838610:CDS 25.0%
! AAATAACCTGAATAAAGACA+AGG - chr5_4:13044056-13044075 None:intergenic 25.0%
!!! AGACAATTTTTATTTTGGGT+GGG - chr5_4:13044120-13044139 None:intergenic 25.0%
!!! TAGACAATTTTTATTTTGGG+TGG - chr5_4:13044121-13044140 None:intergenic 25.0%
! ATAATATTAAACTAGGTCAG+GGG - chr5_4:13044603-13044622 None:intergenic 25.0%
! CATAATATTAAACTAGGTCA+GGG - chr5_4:13044604-13044623 None:intergenic 25.0%
! ACATAATATTAAACTAGGTC+AGG - chr5_4:13044605-13044624 None:intergenic 25.0%
! ATATGTGTGGAATAAAAAGA+AGG + chr5_4:13044633-13044652 Msa0838610:intron 25.0%
! TATGTGTGGAATAAAAAGAA+GGG + chr5_4:13044634-13044653 Msa0838610:intron 25.0%
! GTTGAGTTAGAATACAAAAA+GGG - chr5_4:13044770-13044789 None:intergenic 25.0%
! TGTTGAGTTAGAATACAAAA+AGG - chr5_4:13044771-13044790 None:intergenic 25.0%
! ACCATATAATTCAGAATAGT+GGG - chr5_4:13044828-13044847 None:intergenic 25.0%
! AACCATATAATTCAGAATAG+TGG - chr5_4:13044829-13044848 None:intergenic 25.0%
! CTAAATCATTCGTAAATTTG+TGG - chr5_4:13044883-13044902 None:intergenic 25.0%
! TTATTAGAAACCGAGTAAAT+AGG + chr5_4:13044935-13044954 Msa0838610:intron 25.0%
! TATTAGAAACCGAGTAAATA+GGG + chr5_4:13044936-13044955 Msa0838610:intron 25.0%
!!! GTTGTTATATTTTAATGGTG+GGG - chr5_4:13045242-13045261 None:intergenic 25.0%
!!! GGTTGTTATATTTTAATGGT+GGG - chr5_4:13045243-13045262 None:intergenic 25.0%
!!! TGGTTGTTATATTTTAATGG+TGG - chr5_4:13045244-13045263 None:intergenic 25.0%
!! AAACTTGAGAGAATTTTCAA+TGG + chr5_4:13045328-13045347 Msa0838610:intron 25.0%
!!! TATTTTATACCTTTGGAGTT+TGG + chr5_4:13045391-13045410 Msa0838610:intron 25.0%
!!! TTTTTTTTTATCAACCCAAG+TGG - chr5_4:13046051-13046070 None:intergenic 25.0%
!!! TCTCACTCACTTTAAAATTT+AGG + chr5_4:13046119-13046138 Msa0838610:intron 25.0%
!! ATTTAGGATATCCATGATTA+TGG + chr5_4:13046135-13046154 Msa0838610:intron 25.0%
! ATTATGGTATTTCGATGATA+GGG + chr5_4:13046151-13046170 Msa0838610:intron 25.0%
!!! TCATATTTTGAAGGTAATGA+AGG + chr5_4:13046206-13046225 Msa0838610:intron 25.0%
! GGTAAGAAAGATTTAGATAT+GGG - chr5_4:13046365-13046384 None:intergenic 25.0%
! TGGTAAGAAAGATTTAGATA+TGG - chr5_4:13046366-13046385 None:intergenic 25.0%
! TTAGATATTTAAATGGCACT+AGG - chr5_4:13046399-13046418 None:intergenic 25.0%
! AAATTTGATGCACTTGTTTA+GGG + chr5_4:13046451-13046470 Msa0838610:intron 25.0%
! AACTTATAGTCTGTTTACAA+TGG + chr5_4:13046528-13046547 Msa0838610:intron 25.0%
!! GATGTTTCTATCTTTAATCT+TGG + chr5_4:13046550-13046569 Msa0838610:intron 25.0%
!! AAACTTGATGAAATTTTCAG+TGG + chr5_4:13046996-13047015 Msa0838610:intron 25.0%
!! GTGAAATTCTTTTCATTTCT+AGG + chr5_4:13047051-13047070 Msa0838610:intron 25.0%
!! TATAACTTTTCAATCTCACT+AGG + chr5_4:13047126-13047145 Msa0838610:intron 25.0%
!!! AGTTTAGTAGTTTTTTGATG+GGG + chr5_4:13047353-13047372 Msa0838610:intron 25.0%
! CATAAGCTGATAAATTGAAA+AGG - chr5_4:13047544-13047563 None:intergenic 25.0%
!! CTTTTCAATTTATCAGCTTA+TGG + chr5_4:13047542-13047561 Msa0838610:intron 25.0%
!! AATTTGAAACTATCATCTGT+TGG - chr5_4:13047843-13047862 None:intergenic 25.0%
!! ATGATAGTTTCAAATTTGCT+TGG + chr5_4:13047847-13047866 Msa0838610:CDS 25.0%
! TTTAATAGTTGAAGATACCA+AGG + chr5_4:13047913-13047932 Msa0838610:intron 25.0%
! TTAATAGTTGAAGATACCAA+GGG + chr5_4:13047914-13047933 Msa0838610:intron 25.0%
!!! TTAGTAAGGTTTTAGGATTT+GGG - chr5_4:13048293-13048312 None:intergenic 25.0%
! AAATCCTAAAACCTTACTAA+GGG + chr5_4:13048293-13048312 Msa0838610:intron 25.0%
! TAGAAATCAATGGAAAAAGT+AGG - chr5_4:13048494-13048513 None:intergenic 25.0%
! TGGTGAAAAATAGAAATCAA+TGG - chr5_4:13048504-13048523 None:intergenic 25.0%
! ATTTAATTGAAGGCTATTGT+TGG + chr5_4:13048720-13048739 Msa0838610:intron 25.0%
! ACTAAAAGATGATATGTTCA+AGG + chr5_4:13048913-13048932 Msa0838610:intron 25.0%
! CTAAAAGATGATATGTTCAA+GGG + chr5_4:13048914-13048933 Msa0838610:intron 25.0%
!! GTTCATAATGTTCAAGTTTA+TGG + chr5_4:13049323-13049342 Msa0838610:CDS 25.0%
! GAAAGATAAGTAGATAAGTA+GGG - chr5_4:13049505-13049524 None:intergenic 25.0%
! TGAAAGATAAGTAGATAAGT+AGG - chr5_4:13049506-13049525 None:intergenic 25.0%
!!! TTATTTTTGCAGGTTGATTA+TGG + chr5_4:13049561-13049580 Msa0838610:intron 25.0%
! TAATTTCATATGATGAATGC+AGG + chr5_4:13049712-13049731 Msa0838610:intron 25.0%
!! AAATCAAATCTCAGTTTTTC+AGG - chr5_4:13049782-13049801 None:intergenic 25.0%
!! AATTGACTCAATTCTTCTTA+AGG - chr5_4:13049907-13049926 None:intergenic 25.0%
! AAGTAGAATATTGAAGAATG+TGG - chr5_4:13050075-13050094 None:intergenic 25.0%
!! TTCAAAGAAAACATTAGCTT+TGG - chr5_4:13050222-13050241 None:intergenic 25.0%
! AAACAGAAACTAAGAAAGAA+AGG - chr5_4:13050249-13050268 None:intergenic 25.0%
!!! TCATTTTTACTTGATGATCT+AGG + chr5_4:13050274-13050293 Msa0838610:intron 25.0%
!!! CTATAACATGTGTTTTTGTT+AGG - chr5_4:13050737-13050756 None:intergenic 25.0%
! AGTTGTAGAAAGAAAAAAAG+AGG - chr5_4:13050985-13051004 None:intergenic 25.0%
!! TTTCTACAACTCCATTTTAA+TGG + chr5_4:13050994-13051013 Msa0838610:intron 25.0%
!!! TTCTACAACTCCATTTTAAT+GGG + chr5_4:13050995-13051014 Msa0838610:intron 25.0%
!!! TTTTTTTTCTCTCGTGAAAA+TGG - chr5_4:13051053-13051072 None:intergenic 25.0%
! CAAAGAATATACACAATGTT+GGG - chr5_4:13051081-13051100 None:intergenic 25.0%
! TAGCCGTTAAAAAACTTATT+AGG - chr5_4:13051343-13051362 None:intergenic 25.0%
! TCGCTATGAATAAAAGAAAA+AGG + chr5_4:13051383-13051402 Msa0838610:intron 25.0%
! ACCTTTATATGATATAGCTT+AGG + chr5_4:13051528-13051547 Msa0838610:intron 25.0%
! TCCTAAGCTATATCATATAA+AGG - chr5_4:13051532-13051551 None:intergenic 25.0%
!!! GTTTTAAATTACCCAAACTA+AGG + chr5_4:13051559-13051578 Msa0838610:intron 25.0%
! AACTAAAAAATGTTCAAAGC+AGG + chr5_4:13051628-13051647 Msa0838610:intron 25.0%
!!! ATCCTAGTTTTGAATAACAT+TGG - chr5_4:13051689-13051708 None:intergenic 25.0%
! AACCAAAGAGAAATAAAAAG+CGG - chr5_4:13052056-13052075 None:intergenic 25.0%
! AACATATAATACCTGAAGTA+GGG - chr5_4:13052162-13052181 None:intergenic 25.0%
! AAGTATACAAAAGTGGAATA+GGG - chr5_4:13052220-13052239 None:intergenic 25.0%
! AAAGTATACAAAAGTGGAAT+AGG - chr5_4:13052221-13052240 None:intergenic 25.0%
! AGCAATGTTTAATGATAAAC+AGG + chr5_4:13052694-13052713 Msa0838610:CDS 25.0%
! GCAATGTTTAATGATAAACA+GGG + chr5_4:13052695-13052714 Msa0838610:CDS 25.0%
! CAATGTTTAATGATAAACAG+GGG + chr5_4:13052696-13052715 Msa0838610:CDS 25.0%
!! TATGTTTCGTCAAATTTTCA+CGG + chr5_4:13053219-13053238 Msa0838610:intron 25.0%
! TGGATATAAATCATTCAGAA+GGG + chr5_4:13053575-13053594 Msa0838610:three_prime_UTR 25.0%
! TAATTGAAGGAAAGATGAAT+AGG - chr5_4:13053754-13053773 None:intergenic 25.0%
! CCTGATTTGAATTTGAGATT+CGG - chr5_4:13042453-13042472 None:intergenic 30.0%
TTCAGTGTAATTATACGTGT+CGG + chr5_4:13042803-13042822 Msa0838610:intron 30.0%
!!! TTTTTTTTCTCTCTCTCTCT+TGG - chr5_4:13042983-13043002 None:intergenic 30.0%
GAGTGTTATATATGTGTTCT+AGG + chr5_4:13043041-13043060 Msa0838610:intron 30.0%
TGTTTGAATTGAGTTTACCT+AGG - chr5_4:13043209-13043228 None:intergenic 30.0%
TACCAGTGTAATATATGTGT+GGG - chr5_4:13043257-13043276 None:intergenic 30.0%
TTACCAGTGTAATATATGTG+TGG - chr5_4:13043258-13043277 None:intergenic 30.0%
TTATGCTTGTATATGTGACA+GGG + chr5_4:13043287-13043306 Msa0838610:intron 30.0%
!!! TCAGTTCAAGCCAATTTTTT+TGG + chr5_4:13043315-13043334 Msa0838610:CDS 30.0%
!!! CAGTTCAAGCCAATTTTTTT+GGG + chr5_4:13043316-13043335 Msa0838610:CDS 30.0%
TCAACAGTTCCCAAAAAAAT+TGG - chr5_4:13043328-13043347 None:intergenic 30.0%
CTTCTTCTTTCTTGTATTGT+CGG + chr5_4:13043596-13043615 Msa0838610:intron 30.0%
AAACTTTAACCATATGTCTC+TGG - chr5_4:13043736-13043755 None:intergenic 30.0%
CAGTACGGAAACAATTTATA+AGG - chr5_4:13043865-13043884 None:intergenic 30.0%
AAATTGTTTCCGTACTGAAT+CGG + chr5_4:13043868-13043887 Msa0838610:intron 30.0%
!!! GACAATTTTTATTTTGGGTG+GGG - chr5_4:13044119-13044138 None:intergenic 30.0%
!!! CACACTTTTTTCTATACCAA+TGG + chr5_4:13044156-13044175 Msa0838610:intron 30.0%
! GGATATAGTATTTTGTCAGT+AGG + chr5_4:13044526-13044545 Msa0838610:intron 30.0%
!!! TTATTTTGGTTATGGTTGGT+TGG + chr5_4:13044676-13044695 Msa0838610:intron 30.0%
AATACAAAAAGGGATTACAC+AGG - chr5_4:13044760-13044779 None:intergenic 30.0%
! GACTTTTACTGAAAATACTC+GGG - chr5_4:13044806-13044825 None:intergenic 30.0%
! GGACTTTTACTGAAAATACT+CGG - chr5_4:13044807-13044826 None:intergenic 30.0%
TCCCACTATTCTGAATTATA+TGG + chr5_4:13044824-13044843 Msa0838610:intron 30.0%
ATTTGTGGTCCAGATAAATT+TGG - chr5_4:13044868-13044887 None:intergenic 30.0%
!!! GGATTTGAGTTGAATTTTGA+GGG + chr5_4:13044975-13044994 Msa0838610:intron 30.0%
!!! GATTTGAGTTGAATTTTGAG+GGG + chr5_4:13044976-13044995 Msa0838610:intron 30.0%
!!! ATTTGAGTTGAATTTTGAGG+GGG + chr5_4:13044977-13044996 Msa0838610:intron 30.0%
TTAGATATGCTTAAACCTAC+AGG - chr5_4:13045078-13045097 None:intergenic 30.0%
! TACTTCTCTGATTTTCTGTT+TGG + chr5_4:13045107-13045126 Msa0838610:intron 30.0%
! ACTTCTCTGATTTTCTGTTT+GGG + chr5_4:13045108-13045127 Msa0838610:intron 30.0%
ATAGATTATCAAACAGACCT+AGG - chr5_4:13045152-13045171 None:intergenic 30.0%
AACAGAGAGTCATAAAGTTA+AGG - chr5_4:13045423-13045442 None:intergenic 30.0%
TACTTGCATAAATTCTCTTG+AGG - chr5_4:13045448-13045467 None:intergenic 30.0%
CATGCGTTAATCCAATAATT+CGG - chr5_4:13045564-13045583 None:intergenic 30.0%
! TTTTCCTGTAACACATTTAC+AGG + chr5_4:13045660-13045679 Msa0838610:intron 30.0%
ATAAAATTGACATGGCATAC+AGG + chr5_4:13045731-13045750 Msa0838610:CDS 30.0%
TAAAATTGACATGGCATACA+GGG + chr5_4:13045732-13045751 Msa0838610:CDS 30.0%
ACTTGGTATCTTTATTGACA+AGG + chr5_4:13045826-13045845 Msa0838610:intron 30.0%
TCATCGAAATACCATAATCA+TGG - chr5_4:13046149-13046168 None:intergenic 30.0%
GATTATGGTATTTCGATGAT+AGG + chr5_4:13046150-13046169 Msa0838610:intron 30.0%
CAAATTTGATGCACTTGTTT+AGG + chr5_4:13046450-13046469 Msa0838610:intron 30.0%
TAAGTTCACAAATTTATGCC+TGG - chr5_4:13046514-13046533 None:intergenic 30.0%
TCTTTAATCTTGGTGAAATC+AGG + chr5_4:13046560-13046579 Msa0838610:intron 30.0%
! ATGTGTGAAGACGTTTTTAT+GGG + chr5_4:13046715-13046734 Msa0838610:intron 30.0%
!!! TTTTATGGGTTGTCACTTTT+TGG + chr5_4:13046729-13046748 Msa0838610:intron 30.0%
!! TTTCAGATACTTGATTTGCT+TGG + chr5_4:13046893-13046912 Msa0838610:CDS 30.0%
!!! GTGTTATTTAAGCACAGTTT+TGG + chr5_4:13047208-13047227 Msa0838610:intron 30.0%
GAACATACATAAAAACACAG+AGG + chr5_4:13047268-13047287 Msa0838610:intron 30.0%
ACTGTATGAGAAATAGTTCA+GGG - chr5_4:13047379-13047398 None:intergenic 30.0%
AACTGTATGAGAAATAGTTC+AGG - chr5_4:13047380-13047399 None:intergenic 30.0%
TACAGTTGTCTCTTGATTAT+AGG + chr5_4:13047393-13047412 Msa0838610:intron 30.0%
TTTGAATTGTGGGATACATA+TGG + chr5_4:13047421-13047440 Msa0838610:CDS 30.0%
TTGAATTGTGGGATACATAT+GGG + chr5_4:13047422-13047441 Msa0838610:CDS 30.0%
GCTGATAAATTGAAAAGGTT+AGG - chr5_4:13047539-13047558 None:intergenic 30.0%
ATCAAGAACTGCTCAAAATA+AGG + chr5_4:13047632-13047651 Msa0838610:CDS 30.0%
AACAAAAGAGAGTTGAGTAA+GGG - chr5_4:13047746-13047765 None:intergenic 30.0%
TAACAAAAGAGAGTTGAGTA+AGG - chr5_4:13047747-13047766 None:intergenic 30.0%
! TTTCAAATTTGCTTGGTTCA+GGG + chr5_4:13047854-13047873 Msa0838610:CDS 30.0%
TAATAGTTGAAGATACCAAG+GGG + chr5_4:13047915-13047934 Msa0838610:intron 30.0%
TTTAAATTTACCCGAGTCAT+TGG - chr5_4:13048198-13048217 None:intergenic 30.0%
GGATAATAATGAGAACCATA+GGG - chr5_4:13048272-13048291 None:intergenic 30.0%
!!! CTTAGTAAGGTTTTAGGATT+TGG - chr5_4:13048294-13048313 None:intergenic 30.0%
CAAATCCTAAAACCTTACTA+AGG + chr5_4:13048292-13048311 Msa0838610:intron 30.0%
AAGATCAAAAACTTCCATGA+AGG - chr5_4:13048382-13048401 None:intergenic 30.0%
! TTTTCACCATTTCTTGTCTT+AGG + chr5_4:13048515-13048534 Msa0838610:intron 30.0%
GTGGTAAAAGCAATATATAC+TGG + chr5_4:13048549-13048568 Msa0838610:CDS 30.0%
! GTTGATTCTGTTAATACTGA+TGG + chr5_4:13048582-13048601 Msa0838610:CDS 30.0%
TAGATGAGAGAGAAAGTTAA+GGG - chr5_4:13049011-13049030 None:intergenic 30.0%
ATAGATGAGAGAGAAAGTTA+AGG - chr5_4:13049012-13049031 None:intergenic 30.0%
TGTTTAATGTAAGAAACGTG+AGG + chr5_4:13049086-13049105 Msa0838610:intron 30.0%
! ATTTAATTTCAGTACCCTGT+TGG + chr5_4:13049149-13049168 Msa0838610:intron 30.0%
! CATAATGTTCAAGTTTATGG+AGG + chr5_4:13049326-13049345 Msa0838610:CDS 30.0%
! TTTTTATGTAAAAAGGGAGG+GGG - chr5_4:13049475-13049494 None:intergenic 30.0%
! GTTTTTATGTAAAAAGGGAG+GGG - chr5_4:13049476-13049495 None:intergenic 30.0%
! GGTTTTTATGTAAAAAGGGA+GGG - chr5_4:13049477-13049496 None:intergenic 30.0%
! AGGTTTTTATGTAAAAAGGG+AGG - chr5_4:13049478-13049497 None:intergenic 30.0%
!!! TACCTTTTGATGCTTTGTTT+TGG + chr5_4:13049527-13049546 Msa0838610:intron 30.0%
! AACCAAAACAAAGCATCAAA+AGG - chr5_4:13049532-13049551 None:intergenic 30.0%
! ACATGTTACATTTTGCTCTT+AGG + chr5_4:13049622-13049641 Msa0838610:CDS 30.0%
! CATGTTACATTTTGCTCTTA+GGG + chr5_4:13049623-13049642 Msa0838610:CDS 30.0%
ATCAGTGAATGGAATTAGTA+AGG - chr5_4:13049675-13049694 None:intergenic 30.0%
!! CTGAGATTTGATTTTTCTCA+CGG + chr5_4:13049788-13049807 Msa0838610:CDS 30.0%
!! ATTTGATTTTTCTCACGGTA+TGG + chr5_4:13049793-13049812 Msa0838610:intron 30.0%
TGAGCAAATTAATGCTGAAT+TGG + chr5_4:13049932-13049951 Msa0838610:CDS 30.0%
TGAATTGGATGTAAATGCAA+AGG + chr5_4:13049947-13049966 Msa0838610:CDS 30.0%
!! ATAACCATTTTTCGTTCTCA+GGG - chr5_4:13050168-13050187 None:intergenic 30.0%
TCTATTTCATCTGAATTGTG+TGG + chr5_4:13050187-13050206 Msa0838610:CDS 30.0%
TGCTCTTGATGCAATTAAAA+TGG + chr5_4:13050399-13050418 Msa0838610:CDS 30.0%
TTTGTCTAAATTCTACTAGC+AGG + chr5_4:13050501-13050520 Msa0838610:intron 30.0%
!!! TTTTCCATTCTAGTTCTAGT+TGG + chr5_4:13050532-13050551 Msa0838610:intron 30.0%
CAAAAACACATGTTATAGCA+CGG + chr5_4:13050739-13050758 Msa0838610:intron 30.0%
AAAAACACATGTTATAGCAC+GGG + chr5_4:13050740-13050759 Msa0838610:intron 30.0%
!!! TCTTTTGAAACACAAGTAAC+TGG + chr5_4:13050830-13050849 Msa0838610:intron 30.0%
TTAAAAATGATTCCCCATCA+AGG + chr5_4:13050933-13050952 Msa0838610:intron 30.0%
AGAAAAAAAGAGGCAGTTAT+TGG - chr5_4:13050975-13050994 None:intergenic 30.0%
!! TCTACAACTCCATTTTAATG+GGG + chr5_4:13050996-13051015 Msa0838610:intron 30.0%
GCAAAGAATATACACAATGT+TGG - chr5_4:13051082-13051101 None:intergenic 30.0%
AATCTCTACACTAGACAATT+GGG + chr5_4:13051243-13051262 Msa0838610:intron 30.0%
!!! ATAAGTTTTTTAACGGCTAC+AGG + chr5_4:13051344-13051363 Msa0838610:intron 30.0%
!! ATAAAAGAAAAAGGCATCGA+TGG + chr5_4:13051392-13051411 Msa0838610:intron 30.0%
! ATCGTTCTCATTTTCCATTA+TGG - chr5_4:13051427-13051446 None:intergenic 30.0%
TATGATATAGCTTAGGAAAC+AGG + chr5_4:13051535-13051554 Msa0838610:intron 30.0%
AAAGCAGGAACTTATTAGTT+TGG + chr5_4:13051643-13051662 Msa0838610:intron 30.0%
GTCCAATGTTATTCAAAACT+AGG + chr5_4:13051684-13051703 Msa0838610:intron 30.0%
CATAATAACATTCATCCCTT+AGG - chr5_4:13051714-13051733 None:intergenic 30.0%
!!! GTCTATGTGTTTTTTCTAGA+AGG - chr5_4:13051876-13051895 None:intergenic 30.0%
TAACAACTACTCTATTGCTA+TGG - chr5_4:13052027-13052046 None:intergenic 30.0%
ACCAAAGAGAAATAAAAAGC+GGG - chr5_4:13052055-13052074 None:intergenic 30.0%
CAACATATAATACCTGAAGT+AGG - chr5_4:13052163-13052182 None:intergenic 30.0%
TGTTGAATAAGTATGCATTG+CGG + chr5_4:13052178-13052197 Msa0838610:intron 30.0%
AGTATACAAAAGTGGAATAG+GGG - chr5_4:13052219-13052238 None:intergenic 30.0%
AAAACAAATGCAAAGCTGTA+AGG + chr5_4:13052353-13052372 Msa0838610:CDS 30.0%
ATCAAAAATCATTCAGCAGA+AGG + chr5_4:13052477-13052496 Msa0838610:CDS 30.0%
ATTAAACTCAACACCTAACA+AGG - chr5_4:13052563-13052582 None:intergenic 30.0%
! AACTGTTTGAAGTTAACAGA+AGG - chr5_4:13052668-13052687 None:intergenic 30.0%
GAAAGGAGATAAAGGTAAAT+TGG + chr5_4:13052787-13052806 Msa0838610:CDS 30.0%
TATATTTGGTCAAAATGCCA+TGG + chr5_4:13053029-13053048 Msa0838610:intron 30.0%
ATGAAGGGCAATAAAGAATA+AGG + chr5_4:13053148-13053167 Msa0838610:intron 30.0%
TGAAGGGCAATAAAGAATAA+GGG + chr5_4:13053149-13053168 Msa0838610:intron 30.0%
TCTATAAGACTCCATAAAGT+AGG - chr5_4:13053248-13053267 None:intergenic 30.0%
AAATATTCAGGAGATGCTTA+TGG - chr5_4:13053360-13053379 None:intergenic 30.0%
TCTGAATGATTTATATCCAC+AGG - chr5_4:13053574-13053593 None:intergenic 30.0%
GTGGATATAAATCATTCAGA+AGG + chr5_4:13053574-13053593 Msa0838610:three_prime_UTR 30.0%
TATAAATCATTCAGAAGGGA+AGG + chr5_4:13053579-13053598 Msa0838610:three_prime_UTR 30.0%
ATAAATCATTCAGAAGGGAA+GGG + chr5_4:13053580-13053599 Msa0838610:three_prime_UTR 30.0%
TAAACCCGGATAATTATTTC+CGG - chr5_4:13053629-13053648 None:intergenic 30.0%
ATAATGCTCTTGTATAAACC+CGG - chr5_4:13053643-13053662 None:intergenic 30.0%
TTATTAATCATCCACACCAA+CGG + chr5_4:13053659-13053678 Msa0838610:three_prime_UTR 30.0%
TATACACAGCTAGTAAGATA+CGG - chr5_4:13053689-13053708 None:intergenic 30.0%
ATCTTTCCTTCAATTATCAG+AGG + chr5_4:13053758-13053777 Msa0838610:three_prime_UTR 30.0%
TCTTTCCTTCAATTATCAGA+GGG + chr5_4:13053759-13053778 Msa0838610:three_prime_UTR 30.0%
CTCTTCGAAGAACTTCAAAA+AGG - chr5_4:13042295-13042314 None:intergenic 35.0%
CCGAATCTCAAATTCAAATC+AGG + chr5_4:13042450-13042469 Msa0838610:intron 35.0%
ACCGCCGATGTAAAAAAATA+TGG + chr5_4:13042515-13042534 Msa0838610:intron 35.0%
!!! CCCATATTTTTTTACATCGG+CGG - chr5_4:13042519-13042538 None:intergenic 35.0%
CCGCCGATGTAAAAAAATAT+GGG + chr5_4:13042516-13042535 Msa0838610:intron 35.0%
TAACAAACGAAGCACGAATA+TGG + chr5_4:13042638-13042657 Msa0838610:intron 35.0%
TTACACTGAACTATGAAGCA+CGG - chr5_4:13042793-13042812 None:intergenic 35.0%
AAGCTCTTTCAAATACTCCT+AGG + chr5_4:13043189-13043208 Msa0838610:intron 35.0%
ACCAGTGTAATATATGTGTG+GGG - chr5_4:13043256-13043275 None:intergenic 35.0%
GTTATGCTTGTATATGTGAC+AGG + chr5_4:13043286-13043305 Msa0838610:intron 35.0%
TGTTGATCCTAACACTAGAT+TGG + chr5_4:13043342-13043361 Msa0838610:CDS 35.0%
GTTGATCCTAACACTAGATT+GGG + chr5_4:13043343-13043362 Msa0838610:CDS 35.0%
TTAAACAAGAAGCCATTAGC+TGG + chr5_4:13043503-13043522 Msa0838610:CDS 35.0%
TAAACAAGAAGCCATTAGCT+GGG + chr5_4:13043504-13043523 Msa0838610:CDS 35.0%
ATAGAACGAAGAAGTAGAGA+GGG - chr5_4:13043626-13043645 None:intergenic 35.0%
AATAGAACGAAGAAGTAGAG+AGG - chr5_4:13043627-13043646 None:intergenic 35.0%
CTACTTCTTCGTTCTATTCT+AGG + chr5_4:13043629-13043648 Msa0838610:intron 35.0%
GTAGCATAAATGTTGTCTGA+TGG - chr5_4:13043666-13043685 None:intergenic 35.0%
GAACATACTTTACAGCCAAA+GGG - chr5_4:13043780-13043799 None:intergenic 35.0%
AGAACATACTTTACAGCCAA+AGG - chr5_4:13043781-13043800 None:intergenic 35.0%
TTAGATGTGTATCTTTGGTC+AGG + chr5_4:13043900-13043919 Msa0838610:intron 35.0%
TCTTTGGTCAGGAAAATTTC+TGG + chr5_4:13043911-13043930 Msa0838610:intron 35.0%
CTTTGGTCAGGAAAATTTCT+GGG + chr5_4:13043912-13043931 Msa0838610:intron 35.0%
! TCAGGAAAATTTCTGGGAAA+TGG + chr5_4:13043918-13043937 Msa0838610:intron 35.0%
! CAGGAAAATTTCTGGGAAAT+GGG + chr5_4:13043919-13043938 Msa0838610:intron 35.0%
GTCATTATTAACCAAAGACG+CGG - chr5_4:13044007-13044026 None:intergenic 35.0%
ATGGAACCTTGTCTTTATTC+AGG + chr5_4:13044047-13044066 Msa0838610:CDS 35.0%
!!! ATTTTTATTTTGGGTGGGGT+GGG - chr5_4:13044115-13044134 None:intergenic 35.0%
!!! AATTTTTATTTTGGGTGGGG+TGG - chr5_4:13044116-13044135 None:intergenic 35.0%
! AGCAGAATAGCATCGAAAAT+AGG - chr5_4:13044351-13044370 None:intergenic 35.0%
! TATTTTCGATGCTATTCTGC+TGG + chr5_4:13044350-13044369 Msa0838610:CDS 35.0%
ATCAAGACTGCAGATTATTC+TGG - chr5_4:13044426-13044445 None:intergenic 35.0%
! TAATCTGCAGTCTTGATTTG+TGG + chr5_4:13044429-13044448 Msa0838610:intron 35.0%
TACCATGTGTGTAAACATTC+TGG - chr5_4:13044502-13044521 None:intergenic 35.0%
! TTTTAGGCACGCTAATGTTA+GGG + chr5_4:13044554-13044573 Msa0838610:intron 35.0%
!!! GAGGTTATTTTGGTTATGGT+TGG + chr5_4:13044672-13044691 Msa0838610:intron 35.0%
!!! GGGATTTGAGTTGAATTTTG+AGG + chr5_4:13044974-13044993 Msa0838610:intron 35.0%
CTTGTAATCTTCATTAGTCC+TGG + chr5_4:13045002-13045021 Msa0838610:intron 35.0%
GAAAATCAGAGAAGTAGACA+CGG - chr5_4:13045103-13045122 None:intergenic 35.0%
ATCTTGTTACAACTCTTCCT+AGG + chr5_4:13045132-13045151 Msa0838610:intron 35.0%
TAATCTATTCCATTCTCCGA+AGG + chr5_4:13045164-13045183 Msa0838610:intron 35.0%
AGAGAATCTAAATCTGCCTT+CGG - chr5_4:13045183-13045202 None:intergenic 35.0%
! TTAATGGTGGGGATTGAAAA+TGG - chr5_4:13045231-13045250 None:intergenic 35.0%
ACTTTCTCTCTCATGTTTGA+TGG + chr5_4:13045287-13045306 Msa0838610:intron 35.0%
! TTCTCTCAAGTTTTCTCAAG+CGG - chr5_4:13045321-13045340 None:intergenic 35.0%
TGTTCTTTCAGAACTGTTAG+CGG + chr5_4:13045501-13045520 Msa0838610:intron 35.0%
! TCAATTTTATCTGCATCCCT+TGG - chr5_4:13045721-13045740 None:intergenic 35.0%
GGATGCAGATAAAATTGACA+TGG + chr5_4:13045723-13045742 Msa0838610:CDS 35.0%
CAAGTCAACAATATCTTACC+GGG - chr5_4:13045811-13045830 None:intergenic 35.0%
CCAAGTCAACAATATCTTAC+CGG - chr5_4:13045812-13045831 None:intergenic 35.0%
! ATGCACAATTTTCTACCACT+TGG + chr5_4:13046033-13046052 Msa0838610:intron 35.0%
! TGCACAATTTTCTACCACTT+GGG + chr5_4:13046034-13046053 Msa0838610:intron 35.0%
GACGTATTAAAAGCTGAAGA+GGG + chr5_4:13046281-13046300 Msa0838610:CDS 35.0%
TGGGTACGTACAAATTACAA+TGG + chr5_4:13046313-13046332 Msa0838610:intron 35.0%
TTTAAATGGCACTAGGATGT+GGG - chr5_4:13046392-13046411 None:intergenic 35.0%
ATTTAAATGGCACTAGGATG+TGG - chr5_4:13046393-13046412 None:intergenic 35.0%
! CATGTGTGAAGACGTTTTTA+TGG + chr5_4:13046714-13046733 Msa0838610:intron 35.0%
!!! CAGTGGCTTTGTTATTTTGT+TGG + chr5_4:13047013-13047032 Msa0838610:intron 35.0%
!!! TGGCTTTGTTATTTTGTTGG+TGG + chr5_4:13047016-13047035 Msa0838610:intron 35.0%
TATAGGTAGCGTTTGAATTG+TGG + chr5_4:13047410-13047429 Msa0838610:intron 35.0%
ATAGGTAGCGTTTGAATTGT+GGG + chr5_4:13047411-13047430 Msa0838610:intron 35.0%
!! CGAAGGTTTTAATAGAGCTA+TGG + chr5_4:13047593-13047612 Msa0838610:CDS 35.0%
! TTTTGTTACTGTCAGCAAGT+TGG + chr5_4:13047759-13047778 Msa0838610:intron 35.0%
! GTTTCAAATTTGCTTGGTTC+AGG + chr5_4:13047853-13047872 Msa0838610:CDS 35.0%
!!! TCAGGGTAAGAGTTTTTTGT+TGG + chr5_4:13047871-13047890 Msa0838610:intron 35.0%
! ACGACATGCATCTTCTTTTA+TGG + chr5_4:13048088-13048107 Msa0838610:intron 35.0%
! TATGGTGCTGAATGTCTAAT+TGG + chr5_4:13048106-13048125 Msa0838610:intron 35.0%
! TCTATTTGAAAGCATGTCCT+TGG + chr5_4:13048141-13048160 Msa0838610:intron 35.0%
GCAAATTTGGAAAGATCAAG+TGG - chr5_4:13048250-13048269 None:intergenic 35.0%
ATCTTTCCAAATTTGCCCTA+TGG + chr5_4:13048254-13048273 Msa0838610:intron 35.0%
GGGATAATAATGAGAACCAT+AGG - chr5_4:13048273-13048292 None:intergenic 35.0%
AAAAAAAAGGGAGTCCTTCA+TGG + chr5_4:13048365-13048384 Msa0838610:intron 35.0%
TCAATGGAAAAAGTAGGAAC+TGG - chr5_4:13048488-13048507 None:intergenic 35.0%
! GTTAATACTGATGGTGATGT+TGG + chr5_4:13048591-13048610 Msa0838610:CDS 35.0%
TAGCAACTTGATTGCATTTC+TGG - chr5_4:13048783-13048802 None:intergenic 35.0%
AGATGAGAGAGAAAGTTAAG+GGG - chr5_4:13049010-13049029 None:intergenic 35.0%
ACGTTGCTTATGATTTCCTT+TGG - chr5_4:13049181-13049200 None:intergenic 35.0%
AAAGGAAATCATAAGCAACG+TGG + chr5_4:13049180-13049199 Msa0838610:intron 35.0%
ACACTAAACTAACAAGAGTG+CGG - chr5_4:13049226-13049245 None:intergenic 35.0%
TTTGCATAGACTTTCGATGT+TGG + chr5_4:13049269-13049288 Msa0838610:intron 35.0%
GAACTTGAAATGAAGCATGT+TGG - chr5_4:13049307-13049326 None:intergenic 35.0%
AAGTAGATAAGTAGGGAAAG+AGG - chr5_4:13049498-13049517 None:intergenic 35.0%
GAAGAACAATAGATCCTTTC+TGG - chr5_4:13049760-13049779 None:intergenic 35.0%
ATTGGATGTAAATGCAAAGG+AGG + chr5_4:13049950-13049969 Msa0838610:CDS 35.0%
TTGGATGTAAATGCAAAGGA+GGG + chr5_4:13049951-13049970 Msa0838610:CDS 35.0%
CCTCTAGATGAGACAAAAAA+AGG - chr5_4:13050051-13050070 None:intergenic 35.0%
!!! CCTTTTTTTGTCTCATCTAG+AGG + chr5_4:13050048-13050067 Msa0838610:intron 35.0%
AATGTAGGTTTATCCTGATC+CGG + chr5_4:13050096-13050115 Msa0838610:intron 35.0%
!! GATAACCATTTTTCGTTCTC+AGG - chr5_4:13050169-13050188 None:intergenic 35.0%
ATTTCATCTGAATTGTGTGG+CGG + chr5_4:13050190-13050209 Msa0838610:CDS 35.0%
ACATATTTCAAACACACGAG+AGG + chr5_4:13050300-13050319 Msa0838610:CDS 35.0%
TTGTGACAGCTGTTATTCTA+CGG - chr5_4:13050372-13050391 None:intergenic 35.0%
CAAACCAACTAGAACTAGAA+TGG - chr5_4:13050539-13050558 None:intergenic 35.0%
!! CATTCTAGTTCTAGTTGGTT+TGG + chr5_4:13050537-13050556 Msa0838610:intron 35.0%
TGGTTCACAGTTAATGAAGA+TGG + chr5_4:13050595-13050614 Msa0838610:intron 35.0%
AGGTTCAGGCAGTTAATAAT+GGG - chr5_4:13050627-13050646 None:intergenic 35.0%
! TATAGCACTTATACCCCTTT+TGG + chr5_4:13050700-13050719 Msa0838610:intron 35.0%
! ATAGCACTTATACCCCTTTT+GGG + chr5_4:13050701-13050720 Msa0838610:intron 35.0%
AAAACACATGTTATAGCACG+GGG + chr5_4:13050741-13050760 Msa0838610:intron 35.0%
! AGTTTAAAACTCGAGAGCTT+TGG + chr5_4:13050880-13050899 Msa0838610:intron 35.0%
AAAAAAGAGGCAGTTATTGG+AGG - chr5_4:13050972-13050991 None:intergenic 35.0%
CCTAATACTCCCCATTAAAA+TGG - chr5_4:13051008-13051027 None:intergenic 35.0%
!!! CCATTTTAATGGGGAGTATT+AGG + chr5_4:13051005-13051024 Msa0838610:intron 35.0%
! GAGCATCATGTACATTCTTT+TGG + chr5_4:13051220-13051239 Msa0838610:intron 35.0%
GAATCTCTACACTAGACAAT+TGG + chr5_4:13051242-13051261 Msa0838610:intron 35.0%
!! AAAGGCATCGATGGTTTATA+TGG + chr5_4:13051401-13051420 Msa0838610:intron 35.0%
GATGGTTTATATGGCCATAA+TGG + chr5_4:13051410-13051429 Msa0838610:intron 35.0%
! AATGATGATGATGTCTGTTC+TGG - chr5_4:13051602-13051621 None:intergenic 35.0%
! CAGGAACTTATTAGTTTGGA+AGG + chr5_4:13051647-13051666 Msa0838610:intron 35.0%
TTCAAAACTAGGATGACCTA+AGG + chr5_4:13051695-13051714 Msa0838610:intron 35.0%
TCAAAACTAGGATGACCTAA+GGG + chr5_4:13051696-13051715 Msa0838610:intron 35.0%
TCAAGAGACTGCTTATATAG+AGG + chr5_4:13051748-13051767 Msa0838610:intron 35.0%
CAAGAGACTGCTTATATAGA+GGG + chr5_4:13051749-13051768 Msa0838610:intron 35.0%
CAACAGATAAACATGTTGCA+AGG - chr5_4:13051960-13051979 None:intergenic 35.0%
CTTGCAACATGTTTATCTGT+TGG + chr5_4:13051958-13051977 Msa0838610:intron 35.0%
! TTGCTTTCTGTCTATTTCTC+TGG + chr5_4:13051985-13052004 Msa0838610:intron 35.0%
! TGCTTTCTGTCTATTTCTCT+GGG + chr5_4:13051986-13052005 Msa0838610:intron 35.0%
TGCTAAGAAAGCTGAAATCA+AGG + chr5_4:13052127-13052146 Msa0838610:CDS 35.0%
GTTGAATAAGTATGCATTGC+GGG + chr5_4:13052179-13052198 Msa0838610:intron 35.0%
TGTAAGGATTACAGCTGAAA+AGG + chr5_4:13052369-13052388 Msa0838610:CDS 35.0%
TGCATTTCTCATGTTGATGT+TGG + chr5_4:13052424-13052443 Msa0838610:CDS 35.0%
TTGTATTGGATGACCTTGTT+AGG + chr5_4:13052547-13052566 Msa0838610:intron 35.0%
GTAAATTGGATGTATCAGAG+TGG + chr5_4:13052801-13052820 Msa0838610:CDS 35.0%
TCTTATAGACATTGCTTAGC+TGG + chr5_4:13053259-13053278 Msa0838610:intron 35.0%
TTTGTTTGTCTAGCTGTGTT+TGG + chr5_4:13053415-13053434 Msa0838610:intron 35.0%
CAATGATGTATATTCTCCTG+TGG + chr5_4:13053555-13053574 Msa0838610:three_prime_UTR 35.0%
TTGAAGTAATCTGTTAACGC+CGG + chr5_4:13053607-13053626 Msa0838610:three_prime_UTR 35.0%
TAACGCCGGAAATAATTATC+CGG + chr5_4:13053621-13053640 Msa0838610:three_prime_UTR 35.0%
ATACACAGCTAGTAAGATAC+GGG - chr5_4:13053688-13053707 None:intergenic 35.0%
AAAGATGAATAGGACAGACA+AGG - chr5_4:13053744-13053763 None:intergenic 35.0%
! TTTTGCCCTCTGATAATTGA+AGG - chr5_4:13053767-13053786 None:intergenic 35.0%
CGCAAAATGATCTATCATGA+AGG - chr5_4:13053897-13053916 None:intergenic 35.0%
AACGATAGAAGAGAGAAGAG+AGG - chr5_4:13042407-13042426 None:intergenic 40.0%
!! AACTATGAGGCACTGATACA+CGG + chr5_4:13042592-13042611 Msa0838610:intron 40.0%
! TATACGTGTCGGTATCATGT+CGG + chr5_4:13042814-13042833 Msa0838610:intron 40.0%
TCCCCACACATATATTACAC+TGG + chr5_4:13043252-13043271 Msa0838610:intron 40.0%
AGTTTGCCCAATCTAGTGTT+AGG - chr5_4:13043352-13043371 None:intergenic 40.0%
!!! ATTTTGAAATGTTGGGCAGC+TGG + chr5_4:13043464-13043483 Msa0838610:CDS 40.0%
!! TTTGGTGGTGATGATAAAGC+TGG + chr5_4:13043690-13043709 Msa0838610:CDS 40.0%
! TGGTTAAAGTTTTTGCCTCC+TGG + chr5_4:13043744-13043763 Msa0838610:CDS 40.0%
!! TTAGATACGCCGATTCAGTA+CGG - chr5_4:13043880-13043899 None:intergenic 40.0%
ATTTCTGTACAAGGTCCACA+CGG - chr5_4:13043955-13043974 None:intergenic 40.0%
ACTCCATCTGCATTGAGATA+TGG + chr5_4:13044028-13044047 Msa0838610:CDS 40.0%
GTTCCATATCTCAATGCAGA+TGG - chr5_4:13044034-13044053 None:intergenic 40.0%
!!! TTTTTATTTTGGGTGGGGTG+GGG - chr5_4:13044114-13044133 None:intergenic 40.0%
ATGTCTAACCACAGTTCAGT+AGG + chr5_4:13044205-13044224 Msa0838610:intron 40.0%
TGTCTAACCACAGTTCAGTA+GGG + chr5_4:13044206-13044225 Msa0838610:intron 40.0%
CACCAGAATGTTTACACACA+TGG + chr5_4:13044497-13044516 Msa0838610:intron 40.0%
TGTTTACACACATGGTAGAC+TGG + chr5_4:13044505-13044524 Msa0838610:intron 40.0%
! TTGTCAGTAGGCCTTCTTTT+AGG + chr5_4:13044538-13044557 Msa0838610:intron 40.0%
ACATTAGCGTGCCTAAAAGA+AGG - chr5_4:13044552-13044571 None:intergenic 40.0%
! CTTTTAGGCACGCTAATGTT+AGG + chr5_4:13044553-13044572 Msa0838610:intron 40.0%
TTTAGGCACGCTAATGTTAG+GGG + chr5_4:13044555-13044574 Msa0838610:intron 40.0%
AGGGGTGGGCAATTTATAAT+GGG - chr5_4:13044585-13044604 None:intergenic 40.0%
TATTAAACTAGGTCAGGGGT+GGG - chr5_4:13044599-13044618 None:intergenic 40.0%
ATATTAAACTAGGTCAGGGG+TGG - chr5_4:13044600-13044619 None:intergenic 40.0%
!!! AGGGGAGGTTATTTTGGTTA+TGG + chr5_4:13044668-13044687 Msa0838610:intron 40.0%
CCTGCAATACCCTATTTACT+CGG - chr5_4:13044948-13044967 None:intergenic 40.0%
!! GTAAATAGGGTATTGCAGGT+TGG + chr5_4:13044949-13044968 Msa0838610:intron 40.0%
ATGAGCATAAGCTGTGAAAC+GGG - chr5_4:13045036-13045055 None:intergenic 40.0%
CATGAGCATAAGCTGTGAAA+CGG - chr5_4:13045037-13045056 None:intergenic 40.0%
GTTGCCTGTAAATGTGTTAC+AGG - chr5_4:13045667-13045686 None:intergenic 40.0%
GTAACACATTTACAGGCAAC+TGG + chr5_4:13045667-13045686 Msa0838610:intron 40.0%
! TGTCATTTGCCATTGCTGAT+GGG + chr5_4:13045779-13045798 Msa0838610:CDS 40.0%
! CCGGTAAGATATTGTTGACT+TGG + chr5_4:13045809-13045828 Msa0838610:intron 40.0%
TTATTGACAAGGTTTCCCTC+TGG + chr5_4:13045837-13045856 Msa0838610:intron 40.0%
TATTGACAAGGTTTCCCTCT+GGG + chr5_4:13045838-13045857 Msa0838610:intron 40.0%
! GAAATTTTCAGATCCCCAGA+GGG - chr5_4:13045855-13045874 None:intergenic 40.0%
! TGAAATTTTCAGATCCCCAG+AGG - chr5_4:13045856-13045875 None:intergenic 40.0%
ATGCCTTCCTCAAGAAATGA+GGG - chr5_4:13045912-13045931 None:intergenic 40.0%
AGACAATGTTGTAGCCCTTT+GGG + chr5_4:13045941-13045960 Msa0838610:intron 40.0%
! AAGGTCGTGAGTATGTTTTG+AGG + chr5_4:13046225-13046244 Msa0838610:CDS 40.0%
CGACGTATTAAAAGCTGAAG+AGG + chr5_4:13046280-13046299 Msa0838610:CDS 40.0%
!!! CTGAAGAGGGTTTTTTCAGT+GGG + chr5_4:13046294-13046313 Msa0838610:CDS 40.0%
! AATCAGGCTTGTAAGTGTTG+TGG + chr5_4:13046576-13046595 Msa0838610:intron 40.0%
CATTAGGCATGTGATTCAAG+AGG + chr5_4:13046648-13046667 Msa0838610:CDS 40.0%
TTTCGGCAGAACCTTAGTTA+AGG + chr5_4:13046681-13046700 Msa0838610:CDS 40.0%
GTCTATCCTCACCTTAACTA+AGG - chr5_4:13046695-13046714 None:intergenic 40.0%
AAACCTGTCTTTACTTCTCC+AGG + chr5_4:13046793-13046812 Msa0838610:intron 40.0%
AACCTGTCTTTACTTCTCCA+GGG + chr5_4:13046794-13046813 Msa0838610:intron 40.0%
TCTTAAATTTCGCAATGCCC+TGG - chr5_4:13046814-13046833 None:intergenic 40.0%
! TGCGAAATTTAAGACAGCTG+TGG + chr5_4:13046820-13046839 Msa0838610:CDS 40.0%
!! CAACTACAAGTTGATGTCGA+AGG + chr5_4:13047576-13047595 Msa0838610:CDS 40.0%
AGATACCAAGGGGATAAGAA+TGG + chr5_4:13047925-13047944 Msa0838610:intron 40.0%
AACAACCATTCTTATCCCCT+TGG - chr5_4:13047933-13047952 None:intergenic 40.0%
TGGGATAAAATCCATGTCCA+AGG - chr5_4:13048161-13048180 None:intergenic 40.0%
TGAGAACCATAGGGCAAATT+TGG - chr5_4:13048263-13048282 None:intergenic 40.0%
! ACTGCCCTTAGTAAGGTTTT+AGG - chr5_4:13048300-13048319 None:intergenic 40.0%
AAAAGTGACTGCCCTTAGTA+AGG - chr5_4:13048307-13048326 None:intergenic 40.0%
CATGGTCCTAAGACAAGAAA+TGG - chr5_4:13048524-13048543 None:intergenic 40.0%
!! TTGCTTTTACCACACTCTCA+TGG - chr5_4:13048542-13048561 None:intergenic 40.0%
! TGGTGATGTTGGTGTAATTC+TGG + chr5_4:13048602-13048621 Msa0838610:CDS 40.0%
! TTGATTGCATTTCTGGACGA+AGG - chr5_4:13048776-13048795 None:intergenic 40.0%
ATGAGAGAGAAAGTTAAGGG+GGG - chr5_4:13049008-13049027 None:intergenic 40.0%
GATGAGAGAGAAAGTTAAGG+GGG - chr5_4:13049009-13049028 None:intergenic 40.0%
TCCTTTGGCAAAATCCAACA+GGG - chr5_4:13049166-13049185 None:intergenic 40.0%
TTCCTTTGGCAAAATCCAAC+AGG - chr5_4:13049167-13049186 None:intergenic 40.0%
TTCGTGCTTCACATTGGTAA+TGG + chr5_4:13049350-13049369 Msa0838610:CDS 40.0%
! TCGTGCTTCACATTGGTAAT+GGG + chr5_4:13049351-13049370 Msa0838610:CDS 40.0%
TGGCAACAAAGTAGTATGCA+AGG + chr5_4:13049388-13049407 Msa0838610:CDS 40.0%
GGGGGCAATATACAATCAAA+GGG - chr5_4:13049457-13049476 None:intergenic 40.0%
AGGGGGCAATATACAATCAA+AGG - chr5_4:13049458-13049477 None:intergenic 40.0%
TGTATGGTTAGCGGCTATAA+GGG - chr5_4:13049595-13049614 None:intergenic 40.0%
ATGTATGGTTAGCGGCTATA+AGG - chr5_4:13049596-13049615 None:intergenic 40.0%
GTAACATGTGTGTGCATGTA+TGG - chr5_4:13049611-13049630 None:intergenic 40.0%
ATTCCATTCACTGATCTGCA+TGG + chr5_4:13049680-13049699 Msa0838610:intron 40.0%
TTACCATGCAGATCAGTGAA+TGG - chr5_4:13049686-13049705 None:intergenic 40.0%
!! TGATGAATGCAGGAAGTACT+TGG + chr5_4:13049722-13049741 Msa0838610:intron 40.0%
GGCAAACATGTATACCAGAA+AGG + chr5_4:13049743-13049762 Msa0838610:CDS 40.0%
CTTAAGGAATCAGCATCAAC+AGG - chr5_4:13049891-13049910 None:intergenic 40.0%
TGGATGTAAATGCAAAGGAG+GGG + chr5_4:13049952-13049971 Msa0838610:CDS 40.0%
!! AGCTTTTGCACTTTTAGCTG+AGG + chr5_4:13050327-13050346 Msa0838610:CDS 40.0%
!! TTTTGCACTTTTAGCTGAGG+AGG + chr5_4:13050330-13050349 Msa0838610:CDS 40.0%
!! TTTGCACTTTTAGCTGAGGA+GGG + chr5_4:13050331-13050350 Msa0838610:CDS 40.0%
CAGGTTCAGGCAGTTAATAA+TGG - chr5_4:13050628-13050647 None:intergenic 40.0%
! TTAAAACTCGAGAGCTTTGG+AGG + chr5_4:13050883-13050902 Msa0838610:intron 40.0%
!! TAAAACTCGAGAGCTTTGGA+GGG + chr5_4:13050884-13050903 Msa0838610:intron 40.0%
AAATGATTCCCCATCAAGGA+AGG + chr5_4:13050937-13050956 Msa0838610:intron 40.0%
GGAGATGAAAGCTCTTGTAA+AGG - chr5_4:13051166-13051185 None:intergenic 40.0%
AGTACAACTTCTCTCCACTT+TGG + chr5_4:13051189-13051208 Msa0838610:intron 40.0%
!! ATGCTCTAGAAGTTCCAAAG+TGG - chr5_4:13051206-13051225 None:intergenic 40.0%
GCTACAGGATCATCTATATC+AGG + chr5_4:13051359-13051378 Msa0838610:intron 40.0%
CGATTAGGTCACCTTAGTTT+GGG - chr5_4:13051573-13051592 None:intergenic 40.0%
ACGATTAGGTCACCTTAGTT+TGG - chr5_4:13051574-13051593 None:intergenic 40.0%
CTGTTCTGGCATTTACGATT+AGG - chr5_4:13051588-13051607 None:intergenic 40.0%
TTGGAAGGTAGTTGTGATTC+AGG + chr5_4:13051662-13051681 Msa0838610:intron 40.0%
AGTGCTAAATCCATCTCCAA+CGG - chr5_4:13051934-13051953 None:intergenic 40.0%
!!! GCCCGCTTTTTATTTCTCTT+TGG + chr5_4:13052051-13052070 Msa0838610:intron 40.0%
ATTTCAGCTTTCTTAGCAGC+AGG - chr5_4:13052125-13052144 None:intergenic 40.0%
GCTGATCTAGCTGTTAAAGA+TGG + chr5_4:13052391-13052410 Msa0838610:CDS 40.0%
AAGGTCATCCAATACAATGC+TGG - chr5_4:13052544-13052563 None:intergenic 40.0%
AAGGACACGAGACAAATTCA+AGG - chr5_4:13052634-13052653 None:intergenic 40.0%
TTGAATTTGTCTCGTGTCCT+TGG + chr5_4:13052633-13052652 Msa0838610:intron 40.0%
ACAGAAGGCAAAAATTGCCA+AGG - chr5_4:13052653-13052672 None:intergenic 40.0%
TAAACAGGGGTTATCAGTGA+TGG + chr5_4:13052709-13052728 Msa0838610:CDS 40.0%
!!! AGTGATGGTTTTTAGCACTG+AGG + chr5_4:13052724-13052743 Msa0838610:CDS 40.0%
CACTGAGGAATCTACAAACA+AGG + chr5_4:13052739-13052758 Msa0838610:CDS 40.0%
! AACAAGGTTGTAGTTTGTGC+TGG + chr5_4:13052755-13052774 Msa0838610:CDS 40.0%
! ACAAGGTTGTAGTTTGTGCT+GGG + chr5_4:13052756-13052775 Msa0838610:CDS 40.0%
AGATGTGGTAAAGGAAAAGG+AGG + chr5_4:13052854-13052873 Msa0838610:CDS 40.0%
AGAATAAGGGAACTTCGTGT+TGG + chr5_4:13053162-13053181 Msa0838610:intron 40.0%
TTTCACGGTCACCTACTTTA+TGG + chr5_4:13053234-13053253 Msa0838610:intron 40.0%
! CTTTTGCACGAAAGTCTTCA+GGG + chr5_4:13053296-13053315 Msa0838610:intron 40.0%
TGTATGAACCACCCATTTCA+GGG + chr5_4:13053457-13053476 Msa0838610:intron 40.0%
ATGCATCAGTACCCTGAAAT+GGG - chr5_4:13053471-13053490 None:intergenic 40.0%
TGATGCATCACGCATAAATG+AGG + chr5_4:13053483-13053502 Msa0838610:CDS 40.0%
ATCACGCATAAATGAGGCTA+TGG + chr5_4:13053489-13053508 Msa0838610:CDS 40.0%
! GCATCAACAAGTCGATTTCT+CGG - chr5_4:13053536-13053555 None:intergenic 40.0%
AACGCCGGAAATAATTATCC+GGG + chr5_4:13053622-13053641 Msa0838610:three_prime_UTR 40.0%
!! TAGCACTTTACGTTGGCTTT+GGG - chr5_4:13053813-13053832 None:intergenic 40.0%
GAGAGAGAGAGAGAGAGTTA+CGG - chr5_4:13042189-13042208 None:intergenic 45.0%
GTGGAATGGAGAGAAGAGAT+CGG - chr5_4:13042216-13042235 None:intergenic 45.0%
AGGAGAGTAGGGTCATTGAA+GGG - chr5_4:13042354-13042373 None:intergenic 45.0%
CGTTAGCAAAGAGGAGAGTA+GGG - chr5_4:13042365-13042384 None:intergenic 45.0%
!! TTTTACATCGGCGGTGTCAA+CGG - chr5_4:13042510-13042529 None:intergenic 45.0%
ATGTGTTGTCGTGTCTGACA+CGG + chr5_4:13042743-13042762 Msa0838610:intron 45.0%
AACACGACACATGTCAGAAC+CGG + chr5_4:13042842-13042861 Msa0838610:intron 45.0%
CTATGAAGTCAGACACTCGT+CGG - chr5_4:13042880-13042899 None:intergenic 45.0%
AACACTCATATGAGCCGTGT+CGG - chr5_4:13043028-13043047 None:intergenic 45.0%
ACTACGAGTCCAGAGACATA+TGG + chr5_4:13043724-13043743 Msa0838610:CDS 45.0%
!!! TTTTATTTTGGGTGGGGTGG+GGG - chr5_4:13044113-13044132 None:intergenic 45.0%
CAGGGATTTAAGAGAGCCAT+CGG - chr5_4:13044235-13044254 None:intergenic 45.0%
CAGGGGTGGGCAATTTATAA+TGG - chr5_4:13044586-13044605 None:intergenic 45.0%
AAAGAAGGGACAGAACCAAC+AGG + chr5_4:13044648-13044667 Msa0838610:intron 45.0%
AAGAAGGGACAGAACCAACA+GGG + chr5_4:13044649-13044668 Msa0838610:intron 45.0%
! ACCAACAGGGGAGGTTATTT+TGG + chr5_4:13044662-13044681 Msa0838610:intron 45.0%
ACCAAAATAACCTCCCCTGT+TGG - chr5_4:13044666-13044685 None:intergenic 45.0%
TGGTAAAGAGTCGATGCTCT+AGG + chr5_4:13044696-13044715 Msa0838610:intron 45.0%
TACAACTGCTGGAAACTGCT+TGG - chr5_4:13044733-13044752 None:intergenic 45.0%
ACACAGGAAGTTACAACTGC+TGG - chr5_4:13044744-13044763 None:intergenic 45.0%
!! CCGAGTAAATAGGGTATTGC+AGG + chr5_4:13044945-13044964 Msa0838610:intron 45.0%
TGAGCATAAGCTGTGAAACG+GGG - chr5_4:13045035-13045054 None:intergenic 45.0%
CGTTTCACAGCTTATGCTCA+TGG + chr5_4:13045035-13045054 Msa0838610:intron 45.0%
ACCTACAGGAAGCTACACAT+TGG - chr5_4:13045064-13045083 None:intergenic 45.0%
CTAAATCTGCCTTCGGAGAA+TGG - chr5_4:13045176-13045195 None:intergenic 45.0%
!! TATTTTGGGAAGGCAGCCTT+CGG - chr5_4:13045371-13045390 None:intergenic 45.0%
AGGAGTTGTCCAAACTCCAA+AGG - chr5_4:13045403-13045422 None:intergenic 45.0%
ATTTACAGGCAACTGGTGCT+CGG + chr5_4:13045674-13045693 Msa0838610:intron 45.0%
! CTGTCATTTGCCATTGCTGA+TGG + chr5_4:13045778-13045797 Msa0838610:CDS 45.0%
ATTGACAAGGTTTCCCTCTG+GGG + chr5_4:13045839-13045858 Msa0838610:intron 45.0%
CCTCAAGAAATGAGGGGAAA+AGG - chr5_4:13045905-13045924 None:intergenic 45.0%
! CCTTTTCCCCTCATTTCTTG+AGG + chr5_4:13045902-13045921 Msa0838610:intron 45.0%
TTCCCCTCATTTCTTGAGGA+AGG + chr5_4:13045906-13045925 Msa0838610:intron 45.0%
TGCCTTCCTCAAGAAATGAG+GGG - chr5_4:13045911-13045930 None:intergenic 45.0%
GATGCCTTCCTCAAGAAATG+AGG - chr5_4:13045913-13045932 None:intergenic 45.0%
CAGACAATGTTGTAGCCCTT+TGG + chr5_4:13045940-13045959 Msa0838610:intron 45.0%
GACAATGTTGTAGCCCTTTG+GGG + chr5_4:13045942-13045961 Msa0838610:intron 45.0%
GGTATTTCGATGATAGGGAG+AGG + chr5_4:13046156-13046175 Msa0838610:intron 45.0%
!!! GCTGAAGAGGGTTTTTTCAG+TGG + chr5_4:13046293-13046312 Msa0838610:CDS 45.0%
GGAATCGCTAATCAGATGAC+TGG - chr5_4:13046493-13046512 None:intergenic 45.0%
GTCATCTGATTAGCGATTCC+AGG + chr5_4:13046493-13046512 Msa0838610:intron 45.0%
! AAGTGTTGTGGCAAATGTGC+TGG + chr5_4:13046588-13046607 Msa0838610:CDS 45.0%
AGTGTTGTGGCAAATGTGCT+GGG + chr5_4:13046589-13046608 Msa0838610:CDS 45.0%
!!! TCTTGCTGCTGTTTTAGCTC+GGG - chr5_4:13046625-13046644 None:intergenic 45.0%
!!! CTCTTGCTGCTGTTTTAGCT+CGG - chr5_4:13046626-13046645 None:intergenic 45.0%
! AACAGCAGCAAGAGCACATT+AGG + chr5_4:13046632-13046651 Msa0838610:CDS 45.0%
TAGGCATGTGATTCAAGAGG+AGG + chr5_4:13046651-13046670 Msa0838610:CDS 45.0%
CAAGAGGAGGAGGAAAGTTT+CGG + chr5_4:13046664-13046683 Msa0838610:CDS 45.0%
GCAGAACCTTAGTTAAGGTG+AGG + chr5_4:13046686-13046705 Msa0838610:intron 45.0%
ACAGCTGTGGAACATGTTCA+GGG + chr5_4:13046833-13046852 Msa0838610:CDS 45.0%
TCAATCTCACTAGGTCAGCA+TGG + chr5_4:13047135-13047154 Msa0838610:intron 45.0%
CTACCTGTGTGAGATCTAAC+GGG - chr5_4:13047450-13047469 None:intergenic 45.0%
CCTACCTGTGTGAGATCTAA+CGG - chr5_4:13047451-13047470 None:intergenic 45.0%
! TGTTACTGTCAGCAAGTTGG+TGG + chr5_4:13047762-13047781 Msa0838610:intron 45.0%
!! AGTTGGTGGTGCTATTGTCA+TGG + chr5_4:13047776-13047795 Msa0838610:CDS 45.0%
! TGAAAGCATGTCCTTGGACA+TGG + chr5_4:13048147-13048166 Msa0838610:intron 45.0%
! ATTGGTTGAAGTGGAGTGCT+GGG - chr5_4:13048180-13048199 None:intergenic 45.0%
CTCCACTTCAACCAATGACT+CGG + chr5_4:13048184-13048203 Msa0838610:intron 45.0%
TCCACTTCAACCAATGACTC+GGG + chr5_4:13048185-13048204 Msa0838610:intron 45.0%
ACAAGCTTCTATGCTGAGCA+AGG + chr5_4:13048630-13048649 Msa0838610:CDS 45.0%
TGAGAGAGAAAGTTAAGGGG+GGG - chr5_4:13049007-13049026 None:intergenic 45.0%
! ACCCTGTTGGATTTTGCCAA+AGG + chr5_4:13049162-13049181 Msa0838610:intron 45.0%
!! CTTCACATTGGTAATGGGAC+TGG + chr5_4:13049356-13049375 Msa0838610:CDS 45.0%
! AATGGGACTGGTATCTCTGT+TGG + chr5_4:13049368-13049387 Msa0838610:CDS 45.0%
GTGTGTGCATGTATGGTTAG+CGG - chr5_4:13049604-13049623 None:intergenic 45.0%
TTCACTATGCTGCAATGAGC+AGG + chr5_4:13049861-13049880 Msa0838610:intron 45.0%
CTGACCCTGAGAACGAAAAA+TGG + chr5_4:13050161-13050180 Msa0838610:CDS 45.0%
TGAGCAGCAAGTAGATGAAG+CGG + chr5_4:13050432-13050451 Msa0838610:CDS 45.0%
TAAGCTGGAAGGAAGTTTGC+TGG + chr5_4:13050456-13050475 Msa0838610:CDS 45.0%
TCCATCACTTGAGCCTTTGA+AGG + chr5_4:13050565-13050584 Msa0838610:intron 45.0%
ACCTTCAAAGGCTCAAGTGA+TGG - chr5_4:13050569-13050588 None:intergenic 45.0%
!! CACTTATACCCCTTTTGGGT+GGG + chr5_4:13050705-13050724 Msa0838610:intron 45.0%
AGGTACTATCCCACCCAAAA+GGG - chr5_4:13050717-13050736 None:intergenic 45.0%
TAGGTACTATCCCACCCAAA+AGG - chr5_4:13050718-13050737 None:intergenic 45.0%
TGGAAAGAGCCTTCCTTGAT+GGG - chr5_4:13050949-13050968 None:intergenic 45.0%
AAAGAGGCAGTTATTGGAGG+TGG - chr5_4:13050969-13050988 None:intergenic 45.0%
GTGGAGAGAAGTTGTACTTG+AGG - chr5_4:13051187-13051206 None:intergenic 45.0%
CTCTACACTAGACAATTGGG+AGG + chr5_4:13051246-13051265 Msa0838610:intron 45.0%
ACTAGACAATTGGGAGGTGA+AGG + chr5_4:13051252-13051271 Msa0838610:intron 45.0%
TGCTAAATCCATCTCCAACG+GGG - chr5_4:13051932-13051951 None:intergenic 45.0%
GTGCTAAATCCATCTCCAAC+GGG - chr5_4:13051933-13051952 None:intergenic 45.0%
AGCTGAAATCAAGGCCAAGA+TGG + chr5_4:13052136-13052155 Msa0838610:CDS 45.0%
TTCTCATGTTGATGTTGGCC+TGG + chr5_4:13052429-13052448 Msa0838610:CDS 45.0%
CGGTGTTTCCAGCATTGTAT+TGG + chr5_4:13052533-13052552 Msa0838610:intron 45.0%
! CAAGGTTGTAGTTTGTGCTG+GGG + chr5_4:13052757-13052776 Msa0838610:CDS 45.0%
GTGTCGGAGAAAGGAGATAA+AGG + chr5_4:13052779-13052798 Msa0838610:CDS 45.0%
AGAGTGGCTGAGTAATGCTT+TGG + chr5_4:13052817-13052836 Msa0838610:CDS 45.0%
GAGTGGCTGAGTAATGCTTT+GGG + chr5_4:13052818-13052837 Msa0838610:CDS 45.0%
AGTGGCTGAGTAATGCTTTG+GGG + chr5_4:13052819-13052838 Msa0838610:CDS 45.0%
!! AATGCTTTGGGGTCACTGAA+AGG + chr5_4:13052830-13052849 Msa0838610:CDS 45.0%
!! ATGCTTTGGGGTCACTGAAA+GGG + chr5_4:13052831-13052850 Msa0838610:CDS 45.0%
CTGAAAGGGAGATGTGGTAA+AGG + chr5_4:13052845-13052864 Msa0838610:CDS 45.0%
GGGAGATGTGGTAAAGGAAA+AGG + chr5_4:13052851-13052870 Msa0838610:CDS 45.0%
! AGGAAAAGGAGGTCTTGTGA+CGG + chr5_4:13052865-13052884 Msa0838610:CDS 45.0%
! GCTTTTGCACGAAAGTCTTC+AGG + chr5_4:13053295-13053314 Msa0838610:intron 45.0%
GTGTATGAACCACCCATTTC+AGG + chr5_4:13053456-13053475 Msa0838610:intron 45.0%
GATGCATCAGTACCCTGAAA+TGG - chr5_4:13053472-13053491 None:intergenic 45.0%
AGTAAGATACGGGTATCCGT+TGG - chr5_4:13053678-13053697 None:intergenic 45.0%
!! CTAGCACTTTACGTTGGCTT+TGG - chr5_4:13053814-13053833 None:intergenic 45.0%
! GTGTCACTAGCACTTTACGT+TGG - chr5_4:13053820-13053839 None:intergenic 45.0%
!!! TTTTTTAATATAAAAATTCA+AGG - chr5_4:13053128-13053147 None:intergenic 5.0%
!!! TTTTTATATTAAAAAAATGA+AGG + chr5_4:13053132-13053151 Msa0838610:intron 5.0%
!!! TTTTATATTAAAAAAATGAA+GGG + chr5_4:13053133-13053152 Msa0838610:intron 5.0%
GAATGGAGAGAAGAGATCGG+CGG - chr5_4:13042213-13042232 None:intergenic 50.0%
TCTTCTCTCCATTCCACCTC+CGG + chr5_4:13042219-13042238 Msa0838610:five_prime_UTR 50.0%
TGTCAGGAACCGACATTGAG+TGG + chr5_4:13042247-13042266 Msa0838610:CDS 50.0%
GGAGAGTAGGGTCATTGAAG+GGG - chr5_4:13042353-13042372 None:intergenic 50.0%
GAGGAGAGTAGGGTCATTGA+AGG - chr5_4:13042355-13042374 None:intergenic 50.0%
GCGTTAGCAAAGAGGAGAGT+AGG - chr5_4:13042366-13042385 None:intergenic 50.0%
ACTCTCCTCTTTGCTAACGC+CGG + chr5_4:13042366-13042385 Msa0838610:CDS 50.0%
GAAGAGAGGAGAGTAGTGAC+CGG - chr5_4:13042393-13042412 None:intergenic 50.0%
TGTCGGTGTGTCAGATGTGT+CGG - chr5_4:13042682-13042701 None:intergenic 50.0%
TGTGTTGTCGTGTCTGACAC+GGG + chr5_4:13042744-13042763 Msa0838610:intron 50.0%
TATGAAGCACGGACACTCCT+CGG - chr5_4:13042782-13042801 None:intergenic 50.0%
ACACGACACATGTCAGAACC+GGG + chr5_4:13042843-13042862 Msa0838610:intron 50.0%
AGTCAGACACTCGTCGGATT+AGG - chr5_4:13042874-13042893 None:intergenic 50.0%
CGACGAGTGTCTGACTTCAT+AGG + chr5_4:13042878-13042897 Msa0838610:intron 50.0%
TCCTATGACACTCGTACGAC+CGG - chr5_4:13043114-13043133 None:intergenic 50.0%
GTCGTACGAGTGTCATAGGA+GGG + chr5_4:13043114-13043133 Msa0838610:intron 50.0%
ACCAGCTCGAATGCACTTCT+GGG - chr5_4:13043392-13043411 None:intergenic 50.0%
CACAACGATCTTGACGACGT+GGG + chr5_4:13043418-13043437 Msa0838610:CDS 50.0%
!!! ATGTTGGGCAGCTGGTCTTT+TGG + chr5_4:13043472-13043491 Msa0838610:CDS 50.0%
AAGAAGCCATTAGCTGGGCA+TGG + chr5_4:13043509-13043528 Msa0838610:CDS 50.0%
AGAAGCCATTAGCTGGGCAT+GGG + chr5_4:13043510-13043529 Msa0838610:CDS 50.0%
AAGTTCCCATGCCCAGCTAA+TGG - chr5_4:13043518-13043537 None:intergenic 50.0%
TGTCTCTGGACTCGTAGTCA+GGG - chr5_4:13043722-13043741 None:intergenic 50.0%
ATGTCTCTGGACTCGTAGTC+AGG - chr5_4:13043723-13043742 None:intergenic 50.0%
! TTCTGGGAAATGGGTGACAC+AGG + chr5_4:13043928-13043947 Msa0838610:CDS 50.0%
TAACCAAAGACGCGGCATCT+CGG - chr5_4:13043999-13044018 None:intergenic 50.0%
!!! TTTATTTTGGGTGGGGTGGG+GGG - chr5_4:13044112-13044131 None:intergenic 50.0%
CTAACCACAGTTCAGTAGGG+AGG + chr5_4:13044209-13044228 Msa0838610:intron 50.0%
AAAGCACGTTGACACTGGCA+TGG + chr5_4:13044260-13044279 Msa0838610:CDS 50.0%
AAGCACGTTGACACTGGCAT+GGG + chr5_4:13044261-13044280 Msa0838610:CDS 50.0%
AGAAGGGACAGAACCAACAG+GGG + chr5_4:13044650-13044669 Msa0838610:intron 50.0%
!! ATAGGGTATTGCAGGTTGGC+TGG + chr5_4:13044953-13044972 Msa0838610:intron 50.0%
!! TAGGGTATTGCAGGTTGGCT+GGG + chr5_4:13044954-13044973 Msa0838610:intron 50.0%
GCCAATGTGTAGCTTCCTGT+AGG + chr5_4:13045060-13045079 Msa0838610:intron 50.0%
GAGAATCCAAATCCCTCCGA+AGG + chr5_4:13045352-13045371 Msa0838610:intron 50.0%
! CGGCCATATTCTGGGAAAGT+CGG + chr5_4:13045694-13045713 Msa0838610:CDS 50.0%
GGTCCGACTTTCCCAGAATA+TGG - chr5_4:13045700-13045719 None:intergenic 50.0%
! ATTCTGGGAAAGTCGGACCA+AGG + chr5_4:13045701-13045720 Msa0838610:CDS 50.0%
! TTCTGGGAAAGTCGGACCAA+GGG + chr5_4:13045702-13045721 Msa0838610:CDS 50.0%
CATGGCATACAGGGTTGTTG+CGG + chr5_4:13045741-13045760 Msa0838610:CDS 50.0%
CCATTGTGCATCTCCCCAAA+GGG - chr5_4:13045958-13045977 None:intergenic 50.0%
TCCATTGTGCATCTCCCCAA+AGG - chr5_4:13045959-13045978 None:intergenic 50.0%
!!! CTTGCTGCTGTTTTAGCTCG+GGG - chr5_4:13046624-13046643 None:intergenic 50.0%
GCATGTGATTCAAGAGGAGG+AGG + chr5_4:13046654-13046673 Msa0838610:CDS 50.0%
TGCCCTGGAGAAGTAAAGAC+AGG - chr5_4:13046799-13046818 None:intergenic 50.0%
GACAGCTGTGGAACATGTTC+AGG + chr5_4:13046832-13046851 Msa0838610:CDS 50.0%
CAGCTGTGGAACATGTTCAG+GGG + chr5_4:13046834-13046853 Msa0838610:CDS 50.0%
GTTCCCGTTAGATCTCACAC+AGG + chr5_4:13047444-13047463 Msa0838610:CDS 50.0%
CCGTTAGATCTCACACAGGT+AGG + chr5_4:13047448-13047467 Msa0838610:intron 50.0%
! CATTGGTTGAAGTGGAGTGC+TGG - chr5_4:13048181-13048200 None:intergenic 50.0%
! ACCCGAGTCATTGGTTGAAG+TGG - chr5_4:13048189-13048208 None:intergenic 50.0%
GTCTTAGGACCATGAGAGTG+TGG + chr5_4:13048530-13048549 Msa0838610:intron 50.0%
AGCTTCTATGCTGAGCAAGG+TGG + chr5_4:13048633-13048652 Msa0838610:CDS 50.0%
GAGCAAGGTGGTCAGGTATT+CGG + chr5_4:13048645-13048664 Msa0838610:intron 50.0%
TGGCTGCACTCTTGTTAACG+TGG + chr5_4:13049200-13049219 Msa0838610:intron 50.0%
GGAGGTTTCGTGCTTCACAT+TGG + chr5_4:13049344-13049363 Msa0838610:CDS 50.0%
ACCCTTGATACGCATGGCTT+CGG - chr5_4:13049985-13050004 None:intergenic 50.0%
CCAACTGACACAACTCTAGC+CGG - chr5_4:13050118-13050137 None:intergenic 50.0%
TTTCGTTCTCAGGGTCAGCA+AGG - chr5_4:13050159-13050178 None:intergenic 50.0%
GCTGAGGAGGGAATTGCTAA+AGG + chr5_4:13050343-13050362 Msa0838610:CDS 50.0%
AGTAGATGAAGCGGCTAAGC+TGG + chr5_4:13050441-13050460 Msa0838610:CDS 50.0%
!! GGAAGGAAGTTTGCTGGATG+AGG + chr5_4:13050462-13050481 Msa0838610:CDS 50.0%
!! GGAAGTTTGCTGGATGAGGT+TGG + chr5_4:13050466-13050485 Msa0838610:intron 50.0%
! CACTTGAGCCTTTGAAGGTC+TGG + chr5_4:13050570-13050589 Msa0838610:intron 50.0%
GAACCAAGCCAGACCTTCAA+AGG - chr5_4:13050581-13050600 None:intergenic 50.0%
! GCACTTATACCCCTTTTGGG+TGG + chr5_4:13050704-13050723 Msa0838610:intron 50.0%
GGTACTATCCCACCCAAAAG+GGG - chr5_4:13050716-13050735 None:intergenic 50.0%
GGAAAGAGCCTTCCTTGATG+GGG - chr5_4:13050948-13050967 None:intergenic 50.0%
GTGGAAAGAGCCTTCCTTGA+TGG - chr5_4:13050950-13050969 None:intergenic 50.0%
GCTAAATCCATCTCCAACGG+GGG - chr5_4:13051931-13051950 None:intergenic 50.0%
TACCTGAAGTAGGGCCATCT+TGG - chr5_4:13052153-13052172 None:intergenic 50.0%
GGATCTCATGCGTGAGCAAA+TGG - chr5_4:13052264-13052283 None:intergenic 50.0%
! TGTAGTTTGTGCTGGGGTGT+CGG + chr5_4:13052763-13052782 Msa0838610:CDS 50.0%
! GGAAAAGGAGGTCTTGTGAC+GGG + chr5_4:13052866-13052885 Msa0838610:CDS 50.0%
CATCAGTACCCTGAAATGGG+TGG - chr5_4:13053468-13053487 None:intergenic 50.0%
AGGAACCGACATTGAGTGGC+CGG + chr5_4:13042251-13042270 Msa0838610:CDS 55.0%
AGGGTCATTGAAGGGGACGA+CGG - chr5_4:13042346-13042365 None:intergenic 55.0%
! TGTGTCGGCATGTCAGTGTC+TGG - chr5_4:13042667-13042686 None:intergenic 55.0%
GTGTTGTCGTGTCTGACACG+GGG + chr5_4:13042745-13042764 Msa0838610:intron 55.0%
! TCGTCGGATTAGGCATGTCC+CGG - chr5_4:13042864-13042883 None:intergenic 55.0%
CGTGTCTGAGTTGTCCGACA+CGG + chr5_4:13043011-13043030 Msa0838610:intron 55.0%
ACCGGTCGTACGAGTGTCAT+AGG + chr5_4:13043110-13043129 Msa0838610:intron 55.0%
GGTCGTACGAGTGTCATAGG+AGG + chr5_4:13043113-13043132 Msa0838610:intron 55.0%
GACTAGGCGTGTCACAGTGT+TGG - chr5_4:13043141-13043160 None:intergenic 55.0%
ACTGTGACACGCCTAGTCCT+AGG + chr5_4:13043143-13043162 Msa0838610:intron 55.0%
CTGTGACACGCCTAGTCCTA+GGG + chr5_4:13043144-13043163 Msa0838610:intron 55.0%
TGTGACACGCCTAGTCCTAG+GGG + chr5_4:13043145-13043164 Msa0838610:intron 55.0%
CATGAAGCGCATACACCCCT+AGG - chr5_4:13043163-13043182 None:intergenic 55.0%
! CTAGGGGTGTATGCGCTTCA+TGG + chr5_4:13043161-13043180 Msa0838610:intron 55.0%
! ACCCAGAAGTGCATTCGAGC+TGG + chr5_4:13043388-13043407 Msa0838610:CDS 55.0%
CACCAGCTCGAATGCACTTC+TGG - chr5_4:13043393-13043412 None:intergenic 55.0%
! CAGAAGTGCATTCGAGCTGG+TGG + chr5_4:13043391-13043410 Msa0838610:CDS 55.0%
GCACAACGATCTTGACGACG+TGG + chr5_4:13043417-13043436 Msa0838610:CDS 55.0%
GTCTCTGGACTCGTAGTCAG+GGG - chr5_4:13043721-13043740 None:intergenic 55.0%
AAGGGAAGAACACGTCCAGG+AGG - chr5_4:13043762-13043781 None:intergenic 55.0%
CCAAAGGGAAGAACACGTCC+AGG - chr5_4:13043765-13043784 None:intergenic 55.0%
CCTGGACGTGTTCTTCCCTT+TGG + chr5_4:13043762-13043781 Msa0838610:CDS 55.0%
TAACCGAGATGCCGCGTCTT+TGG + chr5_4:13043993-13044012 Msa0838610:CDS 55.0%
!!! TTATTTTGGGTGGGGTGGGG+GGG - chr5_4:13044111-13044130 None:intergenic 55.0%
GTCAACGTGCTTTGCAGGCA+GGG - chr5_4:13044253-13044272 None:intergenic 55.0%
TGTCAACGTGCTTTGCAGGC+AGG - chr5_4:13044254-13044273 None:intergenic 55.0%
CCAGTGTCAACGTGCTTTGC+AGG - chr5_4:13044258-13044277 None:intergenic 55.0%
CCTGCAAAGCACGTTGACAC+TGG + chr5_4:13044255-13044274 Msa0838610:CDS 55.0%
ACTGGTGCTCGGCCATATTC+TGG + chr5_4:13045685-13045704 Msa0838610:CDS 55.0%
CTGGTGCTCGGCCATATTCT+GGG + chr5_4:13045686-13045705 Msa0838610:CDS 55.0%
GGGTTGTTGCGGATCACATC+AGG + chr5_4:13045752-13045771 Msa0838610:CDS 55.0%
! ATTGCTGATGGGTCTCGTCC+CGG + chr5_4:13045790-13045809 Msa0838610:CDS 55.0%
! CCCTTTGGGGAGATGCACAA+TGG + chr5_4:13045955-13045974 Msa0838610:intron 55.0%
GTCCATAGCGAACAGCTCGA+CGG - chr5_4:13046259-13046278 None:intergenic 55.0%
TGGCACTAGGATGTGGGACA+TGG - chr5_4:13046386-13046405 None:intergenic 55.0%
GTTCAGGGGAACGTACTGAG+CGG + chr5_4:13046848-13046867 Msa0838610:CDS 55.0%
TTCAGGGGAACGTACTGAGC+GGG + chr5_4:13046849-13046868 Msa0838610:CDS 55.0%
CTATGCTGAGCAAGGTGGTC+AGG + chr5_4:13048638-13048657 Msa0838610:CDS 55.0%
TGCCGAAGCCATGCGTATCA+AGG + chr5_4:13049980-13049999 Msa0838610:CDS 55.0%
GCCGAAGCCATGCGTATCAA+GGG + chr5_4:13049981-13050000 Msa0838610:CDS 55.0%
CCATGCGTATCAAGGGTCTG+CGG + chr5_4:13049988-13050007 Msa0838610:CDS 55.0%
! AAGGGTCTGCGGACTGTTTC+TGG + chr5_4:13049999-13050018 Msa0838610:CDS 55.0%
GACACAACTCTAGCCGGATC+AGG - chr5_4:13050112-13050131 None:intergenic 55.0%
CCGGCTAGAGTTGTGTCAGT+TGG + chr5_4:13050115-13050134 Msa0838610:CDS 55.0%
GATGAAGCGGCTAAGCTGGA+AGG + chr5_4:13050445-13050464 Msa0838610:CDS 55.0%
! GAGCCTTTGAAGGTCTGGCT+TGG + chr5_4:13050575-13050594 Msa0838610:intron 55.0%
TAACTGCCTGAACCTGCTGC+TGG + chr5_4:13050632-13050651 Msa0838610:intron 55.0%
! GTTTTGCCAGCAGCAGGTTC+AGG - chr5_4:13050641-13050660 None:intergenic 55.0%
!!! GATGTCGTTTTGCCAGCAGC+AGG - chr5_4:13050647-13050666 None:intergenic 55.0%
CACGAACTGCTGCAACATCC+AGG - chr5_4:13052450-13052469 None:intergenic 55.0%
GGATGTTGCAGCAGTTCGTG+AGG + chr5_4:13052450-13052469 Msa0838610:CDS 55.0%
GGGTCACTGAAAGGGAGATG+TGG + chr5_4:13052839-13052858 Msa0838610:CDS 55.0%
GATACGGGTATCCGTTGGTG+TGG - chr5_4:13053673-13053692 None:intergenic 55.0%
ACATGACGCCGGAGGTGGAA+TGG - chr5_4:13042230-13042249 None:intergenic 60.0%
! GTCGGTTCCTGACATGACGC+CGG - chr5_4:13042241-13042260 None:intergenic 60.0%
CTTCGCCGGCCACTCAATGT+CGG - chr5_4:13042259-13042278 None:intergenic 60.0%
GTATCTCTCACGCGCTTCGC+CGG - chr5_4:13042273-13042292 None:intergenic 60.0%
CCTCTTTGCTAACGCCGGTC+CGG + chr5_4:13042371-13042390 Msa0838610:intron 60.0%
GAGGAGAGTAGTGACCGGAC+CGG - chr5_4:13042388-13042407 None:intergenic 60.0%
GCACGGACACTCCTCGGATA+AGG - chr5_4:13042776-13042795 None:intergenic 60.0%
GCGCATACACCCCTAGGACT+AGG - chr5_4:13043157-13043176 None:intergenic 60.0%
ATGGGTGACACAGGTCCGTG+TGG + chr5_4:13043937-13043956 Msa0838610:CDS 60.0%
TCGGCCTCCCTACTGAACTG+TGG - chr5_4:13044216-13044235 None:intergenic 60.0%
CAGTTCAGTAGGGAGGCCGA+TGG + chr5_4:13044216-13044235 Msa0838610:intron 60.0%
GGCACGCTAATGTTAGGGGC+AGG + chr5_4:13044559-13044578 Msa0838610:intron 60.0%
AGGGACAGAACCAACAGGGG+AGG + chr5_4:13044653-13044672 Msa0838610:intron 60.0%
!! GTGAAACGGGGAGCATCACC+AGG - chr5_4:13045023-13045042 None:intergenic 60.0%
AGGCAGCCTTCGGAGGGATT+TGG - chr5_4:13045361-13045380 None:intergenic 60.0%
TTGGGAAGGCAGCCTTCGGA+GGG - chr5_4:13045367-13045386 None:intergenic 60.0%
TTTGGGAAGGCAGCCTTCGG+AGG - chr5_4:13045368-13045387 None:intergenic 60.0%
GGGACGAGACCCATCAGCAA+TGG - chr5_4:13045791-13045810 None:intergenic 60.0%
CTCCGTCGAGCTGTTCGCTA+TGG + chr5_4:13046254-13046273 Msa0838610:CDS 60.0%
TCAGGGGAACGTACTGAGCG+GGG + chr5_4:13046850-13046869 Msa0838610:CDS 60.0%
CCGCAGACCCTTGATACGCA+TGG - chr5_4:13049991-13050010 None:intergenic 60.0%
GCAATAAGCAGCTCCCCCGT+TGG + chr5_4:13051915-13051934 Msa0838610:intron 60.0%
GGCCAAGATGGCCCTACTTC+AGG + chr5_4:13052148-13052167 Msa0838610:CDS 60.0%
!! TGTGCTGGGGTGTCGGAGAA+AGG + chr5_4:13052770-13052789 Msa0838610:CDS 60.0%
!! AGGAGGTCTTGTGACGGGTC+AGG + chr5_4:13052871-13052890 Msa0838610:CDS 60.0%
TCCACCTCCGGCGTCATGTC+AGG + chr5_4:13042231-13042250 Msa0838610:exon 65.0%
TCCTGACATGACGCCGGAGG+TGG - chr5_4:13042235-13042254 None:intergenic 65.0%
GGTTCCTGACATGACGCCGG+AGG - chr5_4:13042238-13042257 None:intergenic 65.0%
CCGGACCGGCGTTAGCAAAG+AGG - chr5_4:13042374-13042393 None:intergenic 65.0%
ACGGGGACACGCCTTATCCG+AGG + chr5_4:13042762-13042781 Msa0838610:intron 65.0%
AGCAGCTCCCCCGTTGGAGA+TGG + chr5_4:13051921-13051940 Msa0838610:intron 65.0%
GGGGAACGTACTGAGCGGGG+AGG + chr5_4:13046853-13046872 Msa0838610:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 13042119 13053916 13042119 ID=Msa0838610;Name=Msa0838610
chr5_4 mRNA 13042119 13053916 13042119 ID=Msa0838610-mRNA-1;Parent=Msa0838610;Name=Msa0838610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=127|0.90|0.91|1|1|0.95|23|364|975
chr5_4 exon 13042119 13042387 13042119 ID=Msa0838610-mRNA-1:exon:5792;Parent=Msa0838610-mRNA-1
chr5_4 exon 13043308 13043546 13043308 ID=Msa0838610-mRNA-1:exon:5793;Parent=Msa0838610-mRNA-1
chr5_4 exon 13043651 13043791 13043651 ID=Msa0838610-mRNA-1:exon:5794;Parent=Msa0838610-mRNA-1
chr5_4 exon 13043922 13044068 13043922 ID=Msa0838610-mRNA-1:exon:5795;Parent=Msa0838610-mRNA-1
chr5_4 exon 13044219 13044371 13044219 ID=Msa0838610-mRNA-1:exon:5796;Parent=Msa0838610-mRNA-1
chr5_4 exon 13045682 13045811 13045682 ID=Msa0838610-mRNA-1:exon:5797;Parent=Msa0838610-mRNA-1
chr5_4 exon 13046219 13046315 13046219 ID=Msa0838610-mRNA-1:exon:5798;Parent=Msa0838610-mRNA-1
chr5_4 exon 13046582 13046702 13046582 ID=Msa0838610-mRNA-1:exon:5799;Parent=Msa0838610-mRNA-1
chr5_4 exon 13046815 13046925 13046815 ID=Msa0838610-mRNA-1:exon:5800;Parent=Msa0838610-mRNA-1
chr5_4 exon 13047415 13047465 13047415 ID=Msa0838610-mRNA-1:exon:5801;Parent=Msa0838610-mRNA-1
chr5_4 exon 13047558 13047653 13047558 ID=Msa0838610-mRNA-1:exon:5802;Parent=Msa0838610-mRNA-1
chr5_4 exon 13047774 13047875 13047774 ID=Msa0838610-mRNA-1:exon:5803;Parent=Msa0838610-mRNA-1
chr5_4 exon 13048537 13048659 13048537 ID=Msa0838610-mRNA-1:exon:5804;Parent=Msa0838610-mRNA-1
chr5_4 exon 13049278 13049409 13049278 ID=Msa0838610-mRNA-1:exon:5805;Parent=Msa0838610-mRNA-1
chr5_4 exon 13049573 13049644 13049573 ID=Msa0838610-mRNA-1:exon:5806;Parent=Msa0838610-mRNA-1
chr5_4 exon 13049734 13049809 13049734 ID=Msa0838610-mRNA-1:exon:5807;Parent=Msa0838610-mRNA-1
chr5_4 exon 13049883 13050025 13049883 ID=Msa0838610-mRNA-1:exon:5808;Parent=Msa0838610-mRNA-1
chr5_4 exon 13050103 13050211 13050103 ID=Msa0838610-mRNA-1:exon:5809;Parent=Msa0838610-mRNA-1
chr5_4 exon 13050296 13050483 13050296 ID=Msa0838610-mRNA-1:exon:5810;Parent=Msa0838610-mRNA-1
chr5_4 exon 13052080 13052169 13052080 ID=Msa0838610-mRNA-1:exon:5811;Parent=Msa0838610-mRNA-1
chr5_4 exon 13052316 13052498 13052316 ID=Msa0838610-mRNA-1:exon:5812;Parent=Msa0838610-mRNA-1
chr5_4 exon 13052686 13052892 13052686 ID=Msa0838610-mRNA-1:exon:5813;Parent=Msa0838610-mRNA-1
chr5_4 exon 13053478 13053916 13053478 ID=Msa0838610-mRNA-1:exon:5814;Parent=Msa0838610-mRNA-1
chr5_4 five_prime_UTR 13042119 13042245 13042119 ID=Msa0838610-mRNA-1:five_prime_utr;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13042246 13042387 13042246 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13043308 13043546 13043308 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13043651 13043791 13043651 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13043922 13044068 13043922 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13044219 13044371 13044219 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13045682 13045811 13045682 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13046219 13046315 13046219 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13046582 13046702 13046582 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13046815 13046925 13046815 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13047415 13047465 13047415 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13047558 13047653 13047558 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13047774 13047875 13047774 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13048537 13048659 13048537 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13049278 13049409 13049278 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13049573 13049644 13049573 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13049734 13049809 13049734 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13049883 13050025 13049883 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13050103 13050211 13050103 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13050296 13050483 13050296 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13052080 13052169 13052080 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13052316 13052498 13052316 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13052686 13052892 13052686 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 CDS 13053478 13053552 13053478 ID=Msa0838610-mRNA-1:cds;Parent=Msa0838610-mRNA-1
chr5_4 three_prime_UTR 13053553 13053916 13053553 ID=Msa0838610-mRNA-1:three_prime_utr;Parent=Msa0838610-mRNA-1
Gene Sequence

>Msa0838610

ATGTCAGGAACCGACATTGAGTGGCCGGCGAAGCGCGTGAGAGATACCTTTTTGAAGTTCTTCGAAGAGAAGAATCATGTATATTACAAGTCTAGCTCCGTCGTCCCCTTCAATGACCCTACTCTCCTCTTTGCTAACGCCGGGATGAATCAGTTCAAGCCAATTTTTTTGGGAACTGTTGATCCTAACACTAGATTGGGCAAACTCTCTCGTGCTTGCAATACCCAGAAGTGCATTCGAGCTGGTGGCAAGCACAACGATCTTGACGACGTGGGAAAAGACACTTACCATCACACTTATTTTGAAATGTTGGGCAGCTGGTCTTTTGGTGATTATTTTAAACAAGAAGCCATTAGCTGGGCATGGGAACTTCTTACCCAAGTGTATAAATTACCATCAGACAACATTTATGCTACTTATTTTGGTGGTGATGATAAAGCTGGTCTTTCCCCTGACTACGAGTCCAGAGACATATGGTTAAAGTTTTTGCCTCCTGGACGTGTTCTTCCCTTTGGCTGTAAAGAAAATTTCTGGGAAATGGGTGACACAGGTCCGTGTGGACCTTGTACAGAAATTCATTTTGACAGAATTGGTAACCGAGATGCCGCGTCTTTGGTTAATAATGACAACTCCATCTGCATTGAGATATGGAACCTTGTCTTTATTCAGTTCAGTAGGGAGGCCGATGGCTCTCTTAAATCCCTGCCTGCAAAGCACGTTGACACTGGCATGGGTTTTGAACGACTGACGTCTATACTACAAAAAAGAACAAGCAATTATGACACTGACATCTTCATGCCTATTTTCGATGCTATTCTGCTGGCAACTGGTGCTCGGCCATATTCTGGGAAAGTCGGACCAAGGGATGCAGATAAAATTGACATGGCATACAGGGTTGTTGCGGATCACATCAGGACTCTGTCATTTGCCATTGCTGATGGGTCTCGTCCCGGTAATGAAGGTCGTGAGTATGTTTTGAGGCGTATACTCCGTCGAGCTGTTCGCTATGGACGCGACGTATTAAAAGCTGAAGAGGGTTTTTTCAGTGGGCTTGTAAGTGTTGTGGCAAATGTGCTGGGTGATGTTTTCCCCGAGCTAAAACAGCAGCAAGAGCACATTAGGCATGTGATTCAAGAGGAGGAGGAAAGTTTCGGCAGAACCTTAGTTAAGGGCATTGCGAAATTTAAGACAGCTGTGGAACATGTTCAGGGGAACGTACTGAGCGGGGAGGCAAGTATAAAAATTTATTTTCAGATACTTGATTTGCTTGGTTTCATCAATGTAGCGTTTGAATTGTGGGATACATATGGGTTCCCGTTAGATCTCACACAGCTTATGGCTGAAGAGATTCAACTACAAGTTGATGTCGAAGGTTTTAATAGAGCTATGGAAGCTGCTAGAAGAAGATCAAGAACTGCTCAAAATAAGCAAGTTGGTGGTGCTATTGTCATGGATGCTGATGCTACATCAGCGTTGCACAAAAGAAGCATTGCTCCAACAGATGATAGTTTCAAATTTGCTTGGTTCAGGGACCATGAGAGTGTGGTAAAAGCAATATATACTGGTTCTGAGTTTGTTGATTCTGTTAATACTGATGGTGATGTTGGTGTAATTCTGGAATCTACAAGCTTCTATGCTGAGCAAGGTGGTCAGACTTTCGATGTTGGATCTCTTGATTTCCAACATGCTTCATTTCAAGTTCATAATGTTCAAGTTTATGGAGGTTTCGTGCTTCACATTGGTAATGGGACTGGTATCTCTGTTGGCAACAAAGTAGTATGCAAGGTTGATTATGGAAGACGTGCCCTTATAGCCGCTAACCATACATGCACACACATGTTACATTTTGCTCTTAGGGAAGTACTTGGCAAACATGTATACCAGAAAGGATCTATTGTTCTTCCTGAAAAACTGAGATTTGATTTTTCTCACGGCAAGCCTGTTGATGCTGATTCCTTAAGAAGAATTGAGTCAATTGTTAATGAGCAAATTAATGCTGAATTGGATGTAAATGCAAAGGAGGGGACTCATGCCGAAGCCATGCGTATCAAGGGTCTGCGGACTGTTTCTGGAGAAGTTTATCCTGATCCGGCTAGAGTTGTGTCAGTTGGAGAAAAAGTTGAAGATCTCCTTGCTGACCCTGAGAACGAAAAATGGTTATCTATTTCATCTGAATTGTGTGGCGGTACACATATTTCAAACACACGAGAGGCTAAAGCTTTTGCACTTTTAGCTGAGGAGGGAATTGCTAAAGGAATCCGTAGAATAACAGCTGTCACAACTGATCGTGCTCTTGATGCAATTAAAATGGCAGATGAGTTTGAGCAGCAAGTAGATGAAGCGGCTAAGCTGGAAGGAAGTTTGCTGGATGAGAAAGTTTCATCTCTGAAAAGCAATGTAGAAACATTATCAATTCCTGCTGCTAAGAAAGCTGAAATCAAGGCCAAGATGGCCCTACTTCAGGATCAATTGAGAAAAGCGCAAAAACGTGTTGCTGAAGAAAACAAATGCAAAGCTGTAAGGATTACAGCTGAAAAGGCTGATCTAGCTGTTAAAGATGGCAAATCATTTTGCATTTCTCATGTTGATGTTGGCCTGGATGTTGCAGCAGTTCGTGAGGCTGTATCAAAAATCATTCAGCAGAAGTTACTAGAAGCAATGTTTAATGATAAACAGGGGTTATCAGTGATGGTTTTTAGCACTGAGGAATCTACAAACAAGGTTGTAGTTTGTGCTGGGGTGTCGGAGAAAGGAGATAAAGGTAAATTGGATGTATCAGAGTGGCTGAGTAATGCTTTGGGGTCACTGAAAGGGAGATGTGGTAAAGGAAAAGGAGGTCTTGTGACGGGTCAGGGTACTGATGCATCACGCATAAATGAGGCTATGGATCTTGCTCTGAAATATGCATCCGAGAAATCGACTTGTTGA
Protein sequence

>Msa0838610

MSGTDIEWPAKRVRDTFLKFFEEKNHVYYKSSSVVPFNDPTLLFANAGMNQFKPIFLGTVDPNTRLGKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTYFEMLGSWSFGDYFKQEAISWAWELLTQVYKLPSDNIYATYFGGDDKAGLSPDYESRDIWLKFLPPGRVLPFGCKENFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDNSICIEIWNLVFIQFSREADGSLKSLPAKHVDTGMGFERLTSILQKRTSNYDTDIFMPIFDAILLATGARPYSGKVGPRDADKIDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGRDVLKAEEGFFSGLVSVVANVLGDVFPELKQQQEHIRHVIQEEEESFGRTLVKGIAKFKTAVEHVQGNVLSGEASIKIYFQILDLLGFINVAFELWDTYGFPLDLTQLMAEEIQLQVDVEGFNRAMEAARRRSRTAQNKQVGGAIVMDADATSALHKRSIAPTDDSFKFAWFRDHESVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQTFDVGSLDFQHASFQVHNVQVYGGFVLHIGNGTGISVGNKVVCKVDYGRRALIAANHTCTHMLHFALREVLGKHVYQKGSIVLPEKLRFDFSHGKPVDADSLRRIESIVNEQINAELDVNAKEGTHAEAMRIKGLRTVSGEVYPDPARVVSVGEKVEDLLADPENEKWLSISSELCGGTHISNTREAKAFALLAEEGIAKGIRRITAVTTDRALDAIKMADEFEQQVDEAAKLEGSLLDEKVSSLKSNVETLSIPAAKKAEIKAKMALLQDQLRKAQKRVAEENKCKAVRITAEKADLAVKDGKSFCISHVDVGLDVAAVREAVSKIIQQKLLEAMFNDKQGLSVMVFSTEESTNKVVVCAGVSEKGDKGKLDVSEWLSNALGSLKGRCGKGKGGLVTGQGTDASRINEAMDLALKYASEKSTC*