AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663810 MtrunA17_Chr4g0001521 92.281 285 19 2 1 283 1 284 0.0 539
Msa0663810 MtrunA17_Chr4g0072031 72.165 291 73 3 1 283 1 291 4.86e-149 419
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663810 AT5G57280.1 65.744 289 93 2 1 283 1 289 3.13e-139 394

Find 80 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAACATTTCTTGCGTTTC+TGG 0.060479 4_4:+2734402 Msa0663810:three_prime_UTR
ATCTTTGGTTTCAGGGTTTA+GGG 0.172618 4_4:+2731458 Msa0663810:intron
AATTTAATTGTTACATTTCA+TGG 0.202021 4_4:+2734486 Msa0663810:three_prime_UTR
TATCTTTGGTTTCAGGGTTT+AGG 0.204772 4_4:+2731457 Msa0663810:intron
TTCCCGTAACATTGAAATTC+AGG 0.224195 4_4:+2730170 Msa0663810:CDS
CGCATTGGAGCGTGAGGTTC+AGG 0.248495 4_4:+2730764 Msa0663810:CDS
GTTTGTATACTAATATTCTA+TGG 0.282409 4_4:+2734548 Msa0663810:three_prime_UTR
GCAATGAAAGCTGGATTTAC+TGG 0.283729 4_4:+2732065 Msa0663810:CDS
GTAAATCCAGCTTTCATTGC+AGG 0.296762 4_4:-2732062 None:intergenic
ATTTGTCAAGCATTTGTATA+AGG 0.304310 4_4:-2731976 None:intergenic
CATCGGTATATCTGCCATTC+AGG 0.313191 4_4:+2731507 Msa0663810:CDS
GCAAGAAATGTTCAACATTA+AGG 0.324321 4_4:-2734394 None:intergenic
CGACCAGTGTACTTGGTATC+TGG 0.329329 4_4:-2734333 None:intergenic
TTCAATGTTACGGGAATTAG+AGG 0.341768 4_4:-2730163 None:intergenic
CCGTTTCCGACCAGTGTACT+TGG 0.346432 4_4:-2734340 None:intergenic
GACCCATGTCACCGAGTAAA+AGG 0.358459 4_4:-2730791 None:intergenic
AAACCTGAATTTCAATGTTA+CGG 0.373267 4_4:-2730173 None:intergenic
GGGGTATAGTGGTGGATTAT+CGG 0.377554 4_4:+2732087 Msa0663810:CDS
AACCTGAATTTCAATGTTAC+GGG 0.383633 4_4:-2730172 None:intergenic
CAGGGTTTAGGGCTTCGTTT+TGG 0.392659 4_4:+2731469 Msa0663810:intron
TAACTTAGGAACACCGTCAT+TGG 0.426115 4_4:-2730327 None:intergenic
TTATATTTCTGTTTCTTCCA+AGG 0.434075 4_4:-2734237 None:intergenic
GGGTATAGTGGTGGATTATC+GGG 0.438846 4_4:+2732088 Msa0663810:CDS
TCCGGTGGAGCTACCGCCTC+TGG 0.440839 4_4:-2730105 None:intergenic
AGGGAAGGGAATGGATAAAG+AGG 0.451166 4_4:+2734271 Msa0663810:CDS
GAAATATAATAAGAACGAAA+AGG 0.457776 4_4:+2734251 Msa0663810:CDS
TTTAAGTTATTTAATTGTAT+CGG 0.459049 4_4:+2734594 Msa0663810:three_prime_UTR
CAATGAAAGCTGGATTTACT+GGG 0.464441 4_4:+2732066 Msa0663810:CDS
TTCAATGACTGAGCGAGCAC+TGG 0.469446 4_4:+2730289 Msa0663810:CDS
CACAGAGAGTGGACACCATT+GGG 0.471845 4_4:+2730604 Msa0663810:CDS
CTTGCAACAGATTTGACTGA+TGG 0.483017 4_4:-2734451 None:intergenic
TTTACTCGGTGACATGGGTC+AGG 0.486959 4_4:+2730794 Msa0663810:CDS
AAGGAGCAGATGAGAAGAAG+AGG 0.488596 4_4:+2734297 Msa0663810:CDS
TTATACAAATGCTTGACAAA+TGG 0.490254 4_4:+2731978 Msa0663810:CDS
ACCAGAGGCGGTAGCTCCAC+CGG 0.499290 4_4:+2730104 Msa0663810:CDS
GACATTGCACCCTCAATGCT+TGG 0.507243 4_4:+2730635 Msa0663810:CDS
AAATATAATAAGAACGAAAA+GGG 0.511948 4_4:+2734252 Msa0663810:CDS
AACTTAGGAACACCGTCATT+GGG 0.512998 4_4:-2730326 None:intergenic
TTGAGTCCTGCAATGAAAGC+TGG 0.520754 4_4:+2732056 Msa0663810:CDS
CCAAGTACACTGGTCGGAAA+CGG 0.520993 4_4:+2734340 Msa0663810:CDS
CCAATGTCAAGGAGTAACTT+AGG 0.523073 4_4:-2730341 None:intergenic
TCACAGAGAGTGGACACCAT+TGG 0.529338 4_4:+2730603 Msa0663810:CDS
AGAACGAAAAGGGAAGGGAA+TGG 0.533720 4_4:+2734262 Msa0663810:CDS
GCATTGGAGCGTGAGGTTCA+GGG 0.533818 4_4:+2730765 Msa0663810:CDS
ACTAGCATACCAAGCATTGA+GGG 0.538511 4_4:-2730644 None:intergenic
TTAACTTGTAGATATCGCAT+TGG 0.541703 4_4:+2730749 Msa0663810:intron
TTATCTAAAGCAAACCTGAA+TGG 0.544627 4_4:-2731521 None:intergenic
GGAATGTTTGATGGGGCCAT+CGG 0.547297 4_4:+2731490 Msa0663810:CDS
ATAATAAGAACGAAAAGGGA+AGG 0.547716 4_4:+2734256 Msa0663810:CDS
TACTAGCATACCAAGCATTG+AGG 0.548542 4_4:-2730645 None:intergenic
CCTAAGTTACTCCTTGACAT+TGG 0.548757 4_4:+2730341 Msa0663810:CDS
GCACGAGATGCAATTCTCAA+TGG 0.556936 4_4:-2734425 None:intergenic
GGTTGTGGATCGGGACTTAG+CGG 0.566307 4_4:+2730572 Msa0663810:intron
GCATACTTCAATCTTAGATG+AGG 0.569225 4_4:-2731835 None:intergenic
TCATCGTCGTAAAATATCTC+CGG 0.571583 4_4:-2730123 None:intergenic
CATACTTCAATCTTAGATGA+GGG 0.573227 4_4:-2731834 None:intergenic
TAGTGGTGGATTATCGGGAC+AGG 0.577706 4_4:+2732093 Msa0663810:CDS
GACAGAATACATCTAGCTTG+TGG 0.593682 4_4:+2734570 Msa0663810:three_prime_UTR
GAAATAACATACCAATGTCA+AGG 0.594135 4_4:-2730352 None:intergenic
TAATAAGAACGAAAAGGGAA+GGG 0.599558 4_4:+2734257 Msa0663810:CDS
CTTCTCAATTTACCCAATGA+CGG 0.600645 4_4:+2730314 Msa0663810:CDS
GGAATGGATAAAGAGGAAGA+AGG 0.613907 4_4:+2734278 Msa0663810:CDS
CAGATACCAAGTACACTGGT+CGG 0.615749 4_4:+2734334 Msa0663810:CDS
TCGTCGTAAAATATCTCCGG+TGG 0.621804 4_4:-2730120 None:intergenic
GAGAGTGGACACCATTGGGT+TGG 0.626926 4_4:+2730608 Msa0663810:CDS
CAATGTCGAGACCAACCCAA+TGG 0.632121 4_4:-2730619 None:intergenic
AGATATCGCATTGGAGCGTG+AGG 0.647913 4_4:+2730758 Msa0663810:intron
GATGGGTTCAAGACCAGAGG+CGG 0.648096 4_4:+2730092 None:intergenic
TCTTAGATGAGGGTTGTGAG+AGG 0.653129 4_4:-2731824 None:intergenic
CAAGAAGTACCCTTGCCCGA+AGG 0.653794 4_4:+2733725 Msa0663810:CDS
CGGGATGGGTTCAAGACCAG+AGG 0.654002 4_4:+2730089 None:intergenic
CCTCCAGATACCAAGTACAC+TGG 0.661149 4_4:+2734330 Msa0663810:CDS
CCAGTGTACTTGGTATCTGG+AGG 0.664844 4_4:-2734330 None:intergenic
GTTAGGTAATGGTCACGTAG+CGG 0.666806 4_4:+2734518 Msa0663810:three_prime_UTR
CTGAATGGCAGATATACCGA+TGG 0.676516 4_4:-2731506 None:intergenic
GGTGAGGTAATCACAGAGAG+TGG 0.681616 4_4:+2730593 Msa0663810:CDS
ATGAAAGCTGGATTTACTGG+GGG 0.686788 4_4:+2732068 Msa0663810:CDS
AATGAAAGCTGGATTTACTG+GGG 0.700229 4_4:+2732067 Msa0663810:CDS
TTTACGACGATGATACAGCA+CGG 0.708740 4_4:+2730133 Msa0663810:CDS
TGGATCGGGACTTAGCGGTG+AGG 0.729748 4_4:+2730577 Msa0663810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAAAAAAAAAAATC+AGG - chr4_4:2731768-2731787 None:intergenic 10.0%
!!! AAAAGAATAATTTTACTATT+TGG + chr4_4:2732206-2732225 Msa0663810:intron 10.0%
!!! AAAGAATAATTTTACTATTT+GGG + chr4_4:2732207-2732226 Msa0663810:intron 10.0%
!!! TTTAAGTTATTTAATTGTAT+CGG + chr4_4:2734594-2734613 Msa0663810:three_prime_UTR 10.0%
!! TTATATTAGTGTTTATGTAT+AGG + chr4_4:2730911-2730930 Msa0663810:intron 15.0%
!! TAATAGAAATTAGCTAAATT+TGG + chr4_4:2731017-2731036 Msa0663810:intron 15.0%
!!! TAGCATATTATTTTTATCAA+GGG - chr4_4:2731242-2731261 None:intergenic 15.0%
!! AAATATAGTAGTTTAAATGA+AGG + chr4_4:2731323-2731342 Msa0663810:intron 15.0%
!! AAATGAAGGATAAATATAAT+TGG + chr4_4:2731337-2731356 Msa0663810:intron 15.0%
!! TATAACCTAAATATATAAAG+GGG - chr4_4:2731391-2731410 None:intergenic 15.0%
!! CTATAACCTAAATATATAAA+GGG - chr4_4:2731392-2731411 None:intergenic 15.0%
!! TCTATAACCTAAATATATAA+AGG - chr4_4:2731393-2731412 None:intergenic 15.0%
!! CAAATTAAGAAATGTAATAA+CGG + chr4_4:2732408-2732427 Msa0663810:intron 15.0%
!!! ATATTTTTTATATTGGTGTA+AGG + chr4_4:2732562-2732581 Msa0663810:intron 15.0%
!!! TATTTTTTATATTGGTGTAA+GGG + chr4_4:2732563-2732582 Msa0663810:intron 15.0%
!! AAATATAATAAGAACGAAAA+GGG + chr4_4:2734252-2734271 Msa0663810:CDS 15.0%
!! AATTTAATTGTTACATTTCA+TGG + chr4_4:2734486-2734505 Msa0663810:three_prime_UTR 15.0%
!! ACTAATGTTTATCAATAACA+TGG - chr4_4:2731194-2731213 None:intergenic 20.0%
!!! ATATTATTTTTATCAAGGGA+TGG - chr4_4:2731238-2731257 None:intergenic 20.0%
!!! GTAGCATATTATTTTTATCA+AGG - chr4_4:2731243-2731262 None:intergenic 20.0%
!! AATATCCCCTTTATATATTT+AGG + chr4_4:2731383-2731402 Msa0663810:intron 20.0%
!! AAACTACAAAAATTAATGCA+TGG + chr4_4:2731555-2731574 Msa0663810:intron 20.0%
!! TTAATTGAGTTTCATTTCAT+CGG - chr4_4:2731612-2731631 None:intergenic 20.0%
!!! GGAAAAAAAAAAGTATGATA+AGG - chr4_4:2731867-2731886 None:intergenic 20.0%
!!! TTTTTTTTTGTTCCTTTGTA+GGG + chr4_4:2731941-2731960 Msa0663810:intron 20.0%
!! TAAAGATAGTTGTAAAGAAT+AGG - chr4_4:2733165-2733184 None:intergenic 20.0%
!!! ACAACTATCTTTAATTTAAG+TGG + chr4_4:2733172-2733191 Msa0663810:intron 20.0%
!!! TTAAAAGGTGTTACTTTTTT+TGG - chr4_4:2733212-2733231 None:intergenic 20.0%
!! AACACAAAACTTTATAAAAG+GGG - chr4_4:2733241-2733260 None:intergenic 20.0%
!! CAACACAAAACTTTATAAAA+GGG - chr4_4:2733242-2733261 None:intergenic 20.0%
!! ACAACACAAAACTTTATAAA+AGG - chr4_4:2733243-2733262 None:intergenic 20.0%
!! GAAATATAATAAGAACGAAA+AGG + chr4_4:2734251-2734270 Msa0663810:CDS 20.0%
!! GTTTGTATACTAATATTCTA+TGG + chr4_4:2734548-2734567 Msa0663810:three_prime_UTR 20.0%
!! TAGAACTCAAAAAAAATCAT+CGG + chr4_4:2734631-2734650 Msa0663810:three_prime_UTR 20.0%
! AAACCTGAATTTCAATGTTA+CGG - chr4_4:2730176-2730195 None:intergenic 25.0%
!!! GTTAGCTTAGTTGTTTTTAT+CGG + chr4_4:2730381-2730400 Msa0663810:intron 25.0%
!!! TGTGAATGTTTGTTTTGTTT+AGG + chr4_4:2730551-2730570 Msa0663810:intron 25.0%
!! CTAATTTCTATTAGTTCTCA+AGG - chr4_4:2731010-2731029 None:intergenic 25.0%
!! TTGTTGTTATGCTCTAATAA+AGG + chr4_4:2731152-2731171 Msa0663810:intron 25.0%
! GTTTATCAATAACATGGAAA+AGG - chr4_4:2731188-2731207 None:intergenic 25.0%
! GTATTTGATCAAGTAAACAA+TGG + chr4_4:2731291-2731310 Msa0663810:intron 25.0%
!! ATAAAGGGGATATTAAGTTT+TGG - chr4_4:2731377-2731396 None:intergenic 25.0%
! CTTTCTTACTACTTTATCTT+TGG + chr4_4:2731443-2731462 Msa0663810:intron 25.0%
! TGAGTATATTCTTCTTAACA+CGG - chr4_4:2731584-2731603 None:intergenic 25.0%
!!! CTTTTTTTTTGTTCCTTTGT+AGG + chr4_4:2731940-2731959 Msa0663810:intron 25.0%
! ATTTGTCAAGCATTTGTATA+AGG - chr4_4:2731979-2731998 None:intergenic 25.0%
! TTATACAAATGCTTGACAAA+TGG + chr4_4:2731978-2731997 Msa0663810:CDS 25.0%
!! TAATTTTACTATTTGGGCTT+AGG + chr4_4:2732213-2732232 Msa0663810:intron 25.0%
!! AATTTTACTATTTGGGCTTA+GGG + chr4_4:2732214-2732233 Msa0663810:intron 25.0%
! TGTAAATACTTTAGCGATAT+GGG - chr4_4:2732344-2732363 None:intergenic 25.0%
! ACTATATAGTGTTAGAAAAC+AGG + chr4_4:2732475-2732494 Msa0663810:intron 25.0%
! CTATATAGTGTTAGAAAACA+GGG + chr4_4:2732476-2732495 Msa0663810:intron 25.0%
! AAAGCTAGTAGCAAATAAAT+AGG - chr4_4:2733101-2733120 None:intergenic 25.0%
!!! ACTAGCTTTTTCCTAAAAAA+AGG + chr4_4:2733112-2733131 Msa0663810:intron 25.0%
!!! CTAGCTTTTTCCTAAAAAAA+GGG + chr4_4:2733113-2733132 Msa0663810:intron 25.0%
! TTTCCTAAAAAAAGGGATAA+TGG + chr4_4:2733120-2733139 Msa0663810:intron 25.0%
! TTCCTAAAAAAAGGGATAAT+GGG + chr4_4:2733121-2733140 Msa0663810:intron 25.0%
! TAAAAGGGGAAACAATTAAA+AGG - chr4_4:2733227-2733246 None:intergenic 25.0%
! TGTGTATTTGATTCATATTC+AGG + chr4_4:2733814-2733833 Msa0663810:intron 25.0%
! TTCTTCATAAAGTATGACTT+TGG + chr4_4:2733875-2733894 Msa0663810:intron 25.0%
! ATGCACATGTATTAAAATCA+TGG + chr4_4:2734049-2734068 Msa0663810:intron 25.0%
!! TTATATTTCTGTTTCTTCCA+AGG - chr4_4:2734240-2734259 None:intergenic 25.0%
! AGAACTCAAAAAAAATCATC+GGG + chr4_4:2734632-2734651 Msa0663810:three_prime_UTR 25.0%
AACCTGAATTTCAATGTTAC+GGG - chr4_4:2730175-2730194 None:intergenic 30.0%
TCAGAAATCGAATCAGAAAT+CGG - chr4_4:2730248-2730267 None:intergenic 30.0%
GAAATAACATACCAATGTCA+AGG - chr4_4:2730355-2730374 None:intergenic 30.0%
!!! TGTTTGTTTTGTTTAGGTTG+TGG + chr4_4:2730557-2730576 Msa0663810:intron 30.0%
!! TTAACTTGTAGATATCGCAT+TGG + chr4_4:2730749-2730768 Msa0663810:intron 30.0%
! GTTGTCAATCATAGATTTTG+TGG + chr4_4:2730846-2730865 Msa0663810:intron 30.0%
! ATAACAACAAAGCATTTGGT+TGG - chr4_4:2731142-2731161 None:intergenic 30.0%
! ACTACTTTATCTTTGGTTTC+AGG + chr4_4:2731450-2731469 Msa0663810:intron 30.0%
! CTACTTTATCTTTGGTTTCA+GGG + chr4_4:2731451-2731470 Msa0663810:intron 30.0%
!!! TTCGTTTTGGAATGTTTGAT+GGG + chr4_4:2731482-2731501 Msa0663810:CDS 30.0%
! TTATCTAAAGCAAACCTGAA+TGG - chr4_4:2731524-2731543 None:intergenic 30.0%
!!! TTTTTGACTTGATAATGCAG+TGG + chr4_4:2731782-2731801 Msa0663810:intron 30.0%
CATACTTCAATCTTAGATGA+GGG - chr4_4:2731837-2731856 None:intergenic 30.0%
TCCAATGTATGTAAAGCATA+TGG + chr4_4:2731884-2731903 Msa0663810:intron 30.0%
TCCATATGCTTTACATACAT+TGG - chr4_4:2731888-2731907 None:intergenic 30.0%
AAAAAAGTTGTAAAGAAGCG+AGG - chr4_4:2731927-2731946 None:intergenic 30.0%
ATGTAAAAAAAGCCCTACAA+AGG - chr4_4:2731956-2731975 None:intergenic 30.0%
ATTACTCTTGATGAAACGAA+TGG - chr4_4:2732139-2732158 None:intergenic 30.0%
GCAAAAAAAAAAGTGATAGG+CGG - chr4_4:2732283-2732302 None:intergenic 30.0%
TGGGCAAAAAAAAAAGTGAT+AGG - chr4_4:2732286-2732305 None:intergenic 30.0%
GTGTAAATACTTTAGCGATA+TGG - chr4_4:2732345-2732364 None:intergenic 30.0%
! CCTTAAACGACATTTTGAAT+CGG - chr4_4:2732378-2732397 None:intergenic 30.0%
! CTTGACAAACAAAAGTTTTG+TGG + chr4_4:2733376-2733395 Msa0663810:intron 30.0%
! ATGATATATGTTGACTGTCT+CGG - chr4_4:2733591-2733610 None:intergenic 30.0%
!! TTTTTCTTTTTCACCAACTG+TGG + chr4_4:2733640-2733659 Msa0663810:intron 30.0%
! AGATACTCTTTTCTCTTCTT+AGG - chr4_4:2733689-2733708 None:intergenic 30.0%
TGAATCAAATACACAGATGT+GGG - chr4_4:2733809-2733828 None:intergenic 30.0%
ATGAATCAAATACACAGATG+TGG - chr4_4:2733810-2733829 None:intergenic 30.0%
! TAGAAGCATAAATCAATACC+AGG - chr4_4:2733911-2733930 None:intergenic 30.0%
GCTATAACCAATTTATGAAC+AGG - chr4_4:2733949-2733968 None:intergenic 30.0%
TAAGATCTCTCTATCATTGA+TGG + chr4_4:2734005-2734024 Msa0663810:intron 30.0%
CTTGCGAAAAATGTTAAAAG+AGG - chr4_4:2734149-2734168 None:intergenic 30.0%
TGAACAAACAAAAATACTGC+AGG + chr4_4:2734191-2734210 Msa0663810:intron 30.0%
! TTTTAGACAGAAATAGACCT+TGG + chr4_4:2734220-2734239 Msa0663810:CDS 30.0%
ATAATAAGAACGAAAAGGGA+AGG + chr4_4:2734256-2734275 Msa0663810:CDS 30.0%
TAATAAGAACGAAAAGGGAA+GGG + chr4_4:2734257-2734276 Msa0663810:CDS 30.0%
GCAAGAAATGTTCAACATTA+AGG - chr4_4:2734397-2734416 None:intergenic 30.0%
!!! TTTCATGGCTTTTTTGTGTT+AGG + chr4_4:2734501-2734520 Msa0663810:three_prime_UTR 30.0%
TCATCGTCGTAAAATATCTC+CGG - chr4_4:2730126-2730145 None:intergenic 35.0%
TTCAATGTTACGGGAATTAG+AGG - chr4_4:2730166-2730185 None:intergenic 35.0%
TTCCCGTAACATTGAAATTC+AGG + chr4_4:2730170-2730189 Msa0663810:CDS 35.0%
GAAGAAGAAGAAGAAGAAGA+GGG - chr4_4:2730200-2730219 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr4_4:2730201-2730220 None:intergenic 35.0%
CTTCTCAATTTACCCAATGA+CGG + chr4_4:2730314-2730333 Msa0663810:CDS 35.0%
!!! GTTTTGTTTAGGTTGTGGAT+CGG + chr4_4:2730562-2730581 Msa0663810:intron 35.0%
!!! TTTTGTTTAGGTTGTGGATC+GGG + chr4_4:2730563-2730582 Msa0663810:intron 35.0%
!! GACAACAATTTGCTGAAATC+AGG - chr4_4:2730832-2730851 None:intergenic 35.0%
TGTGGAAAATAGCAGTTTGT+AGG + chr4_4:2730864-2730883 Msa0663810:intron 35.0%
GTAGGAATTCTGTTATGCTA+TGG + chr4_4:2730882-2730901 Msa0663810:intron 35.0%
! GAGCATAACAACAAAGCATT+TGG - chr4_4:2731146-2731165 None:intergenic 35.0%
! ATTTTTATCAAGGGATGGAC+AGG - chr4_4:2731233-2731252 None:intergenic 35.0%
! TATCTTTGGTTTCAGGGTTT+AGG + chr4_4:2731457-2731476 Msa0663810:intron 35.0%
! ATCTTTGGTTTCAGGGTTTA+GGG + chr4_4:2731458-2731477 Msa0663810:intron 35.0%
!!! CTTCGTTTTGGAATGTTTGA+TGG + chr4_4:2731481-2731500 Msa0663810:CDS 35.0%
!!! TCGTTTTGGAATGTTTGATG+GGG + chr4_4:2731483-2731502 Msa0663810:CDS 35.0%
ACTTATCCCAGATCAAAATG+GGG - chr4_4:2731698-2731717 None:intergenic 35.0%
GACTTATCCCAGATCAAAAT+GGG - chr4_4:2731699-2731718 None:intergenic 35.0%
TGACTTATCCCAGATCAAAA+TGG - chr4_4:2731700-2731719 None:intergenic 35.0%
CCAAGAAAACTTGGTAGAAA+AGG - chr4_4:2731724-2731743 None:intergenic 35.0%
! CCTTTTCTACCAAGTTTTCT+TGG + chr4_4:2731721-2731740 Msa0663810:intron 35.0%
ACACGTAAACCAAGAAAACT+TGG - chr4_4:2731733-2731752 None:intergenic 35.0%
GCATACTTCAATCTTAGATG+AGG - chr4_4:2731838-2731857 None:intergenic 35.0%
CAATGAAAGCTGGATTTACT+GGG + chr4_4:2732066-2732085 Msa0663810:CDS 35.0%
AATGAAAGCTGGATTTACTG+GGG + chr4_4:2732067-2732086 Msa0663810:CDS 35.0%
CAGTTCTCACAAGAATTGTT+GGG - chr4_4:2732305-2732324 None:intergenic 35.0%
TCAGTTCTCACAAGAATTGT+TGG - chr4_4:2732306-2732325 None:intergenic 35.0%
ATTCTTGTGAGAACTGATGA+AGG + chr4_4:2732309-2732328 Msa0663810:intron 35.0%
! AACGACATTTTGAATCGGTA+TGG - chr4_4:2732373-2732392 None:intergenic 35.0%
! CCGATTCAAAATGTCGTTTA+AGG + chr4_4:2732375-2732394 Msa0663810:intron 35.0%
AAGAAAACTAGGCTAAGAGT+GGG - chr4_4:2732890-2732909 None:intergenic 35.0%
TTGGGTTCTGTTTAGAAGTT+AGG + chr4_4:2732953-2732972 Msa0663810:intron 35.0%
TGGGTTCTGTTTAGAAGTTA+GGG + chr4_4:2732954-2732973 Msa0663810:intron 35.0%
!!! AGCCCATTATCCCTTTTTTT+AGG - chr4_4:2733126-2733145 None:intergenic 35.0%
!! TAAAAAAAGGGATAATGGGC+TGG + chr4_4:2733125-2733144 Msa0663810:intron 35.0%
!! AAAAAAAGGGATAATGGGCT+GGG + chr4_4:2733126-2733145 Msa0663810:intron 35.0%
!!! CTTTTTTTGGTCAACTGAAC+AGG - chr4_4:2733199-2733218 None:intergenic 35.0%
!! CTTTTAAGTGTGGAGAATCT+GGG - chr4_4:2733332-2733351 None:intergenic 35.0%
!! ACTTTTAAGTGTGGAGAATC+TGG - chr4_4:2733333-2733352 None:intergenic 35.0%
!! GATTCACACACTTTTAAGTG+TGG - chr4_4:2733342-2733361 None:intergenic 35.0%
! GAGTATCTTTTTCTCGTATG+TGG + chr4_4:2733701-2733720 Msa0663810:CDS 35.0%
AATCAAATACACAGATGTGG+GGG - chr4_4:2733807-2733826 None:intergenic 35.0%
GAATCAAATACACAGATGTG+GGG - chr4_4:2733808-2733827 None:intergenic 35.0%
TACATTATTCCCCAGCATAA+GGG - chr4_4:2734122-2734141 None:intergenic 35.0%
TTGAACATTTCTTGCGTTTC+TGG + chr4_4:2734402-2734421 Msa0663810:three_prime_UTR 35.0%
!!! GGCTTTTTTGTGTTAGGTAA+TGG + chr4_4:2734507-2734526 Msa0663810:three_prime_UTR 35.0%
TTTACGACGATGATACAGCA+CGG + chr4_4:2730133-2730152 Msa0663810:CDS 40.0%
AACTTAGGAACACCGTCATT+GGG - chr4_4:2730329-2730348 None:intergenic 40.0%
TAACTTAGGAACACCGTCAT+TGG - chr4_4:2730330-2730349 None:intergenic 40.0%
CCAATGTCAAGGAGTAACTT+AGG - chr4_4:2730344-2730363 None:intergenic 40.0%
CCTAAGTTACTCCTTGACAT+TGG + chr4_4:2730341-2730360 Msa0663810:CDS 40.0%
! TTTTTATCGGTCACAGACAC+CGG + chr4_4:2730394-2730413 Msa0663810:intron 40.0%
CATATGTGTGAGTGTCCTAT+CGG + chr4_4:2730453-2730472 Msa0663810:intron 40.0%
ATGGACATGTGGCAATCATA+AGG + chr4_4:2730478-2730497 Msa0663810:intron 40.0%
TGGACATGTGGCAATCATAA+GGG + chr4_4:2730479-2730498 Msa0663810:intron 40.0%
!! ACTAGCATACCAAGCATTGA+GGG - chr4_4:2730647-2730666 None:intergenic 40.0%
! TACTAGCATACCAAGCATTG+AGG - chr4_4:2730648-2730667 None:intergenic 40.0%
TAAGTGCTTGTGAGACTGTT+TGG - chr4_4:2731090-2731109 None:intergenic 40.0%
!! CAACATCCCCATTTTGATCT+GGG + chr4_4:2731689-2731708 Msa0663810:intron 40.0%
! ACACGTTGATCATCGTTTTC+TGG - chr4_4:2732029-2732048 None:intergenic 40.0%
GTAAATCCAGCTTTCATTGC+AGG - chr4_4:2732065-2732084 None:intergenic 40.0%
GCAATGAAAGCTGGATTTAC+TGG + chr4_4:2732065-2732084 Msa0663810:CDS 40.0%
ATGAAAGCTGGATTTACTGG+GGG + chr4_4:2732068-2732087 Msa0663810:CDS 40.0%
!! AAAGAGTGCCTATAAGCCAT+GGG - chr4_4:2732258-2732277 None:intergenic 40.0%
CTGCTATTGACAGCATAGAT+CGG - chr4_4:2732620-2732639 None:intergenic 40.0%
TTGACAAAGGTAGAGGTTGA+TGG - chr4_4:2732854-2732873 None:intergenic 40.0%
CAAGAAAACTAGGCTAAGAG+TGG - chr4_4:2732891-2732910 None:intergenic 40.0%
!! TCTTAGCCTAGTTTTCTTGC+AGG + chr4_4:2732892-2732911 Msa0663810:intron 40.0%
!! CTTAGCCTAGTTTTCTTGCA+GGG + chr4_4:2732893-2732912 Msa0663810:intron 40.0%
AAAAGCCCTGCAAGAAAACT+AGG - chr4_4:2732901-2732920 None:intergenic 40.0%
!! AGGGCTTTTCTTTAGCTCAA+GGG + chr4_4:2732912-2732931 Msa0663810:intron 40.0%
! TTTTCTCGCAGTTGGGTTTT+GGG + chr4_4:2732935-2732954 Msa0663810:intron 40.0%
GTCTGTAAGTGTAGATCAGT+TGG + chr4_4:2733265-2733284 Msa0663810:intron 40.0%
!! CTTTTGTTTGTCAAGTAGCC+TGG - chr4_4:2733371-2733390 None:intergenic 40.0%
GACAACAATTGTTCCACAGT+TGG - chr4_4:2733656-2733675 None:intergenic 40.0%
! TCGTCTTCAGTTTTACCTTC+GGG - chr4_4:2733743-2733762 None:intergenic 40.0%
! GTCGTCTTCAGTTTTACCTT+CGG - chr4_4:2733744-2733763 None:intergenic 40.0%
ATCAAATACACAGATGTGGG+GGG - chr4_4:2733806-2733825 None:intergenic 40.0%
CCAATTTATGAACAGGTGCT+TGG - chr4_4:2733942-2733961 None:intergenic 40.0%
CCAAGCACCTGTTCATAAAT+TGG + chr4_4:2733939-2733958 Msa0663810:intron 40.0%
CTACATTATTCCCCAGCATA+AGG - chr4_4:2734123-2734142 None:intergenic 40.0%
GGAATGGATAAAGAGGAAGA+AGG + chr4_4:2734278-2734297 Msa0663810:CDS 40.0%
CTTGCAACAGATTTGACTGA+TGG - chr4_4:2734454-2734473 None:intergenic 40.0%
! GACAGAATACATCTAGCTTG+TGG + chr4_4:2734570-2734589 Msa0663810:three_prime_UTR 40.0%
TCGTCGTAAAATATCTCCGG+TGG - chr4_4:2730123-2730142 None:intergenic 45.0%
CATGTGGCAATCATAAGGGT+CGG + chr4_4:2730483-2730502 Msa0663810:intron 45.0%
ATCATAAGGGTCGGTGATTC+AGG + chr4_4:2730492-2730511 Msa0663810:intron 45.0%
TCATAAGGGTCGGTGATTCA+GGG + chr4_4:2730493-2730512 Msa0663810:intron 45.0%
!! GACCTTTTACTCGGTGACAT+GGG + chr4_4:2730789-2730808 Msa0663810:CDS 45.0%
CTGAATGGCAGATATACCGA+TGG - chr4_4:2731509-2731528 None:intergenic 45.0%
CATCGGTATATCTGCCATTC+AGG + chr4_4:2731507-2731526 Msa0663810:CDS 45.0%
CCAGATCAAAATGGGGATGT+TGG - chr4_4:2731691-2731710 None:intergenic 45.0%
!! CCAACATCCCCATTTTGATC+TGG + chr4_4:2731688-2731707 Msa0663810:intron 45.0%
TCTTAGATGAGGGTTGTGAG+AGG - chr4_4:2731827-2731846 None:intergenic 45.0%
TTGAGTCCTGCAATGAAAGC+TGG + chr4_4:2732056-2732075 Msa0663810:CDS 45.0%
! TGGATTTACTGGGGGTATAG+TGG + chr4_4:2732076-2732095 Msa0663810:CDS 45.0%
! ATTTACTGGGGGTATAGTGG+TGG + chr4_4:2732079-2732098 Msa0663810:CDS 45.0%
!! GGGGTATAGTGGTGGATTAT+CGG + chr4_4:2732087-2732106 Msa0663810:CDS 45.0%
!! GGGTATAGTGGTGGATTATC+GGG + chr4_4:2732088-2732107 Msa0663810:CDS 45.0%
GAGGATTTCCCATGGCTTAT+AGG + chr4_4:2732247-2732266 Msa0663810:intron 45.0%
!! CAAAGAGTGCCTATAAGCCA+TGG - chr4_4:2732259-2732278 None:intergenic 45.0%
TATGCTGTCAATAGCAGCTG+TGG + chr4_4:2732623-2732642 Msa0663810:intron 45.0%
ATGCTGTCAATAGCAGCTGT+GGG + chr4_4:2732624-2732643 Msa0663810:intron 45.0%
! AATTTGTTCTCCTCGTTCCC+TGG + chr4_4:2732791-2732810 Msa0663810:intron 45.0%
!! ACAAAGGTAGAGGTTGATGG+CGG - chr4_4:2732851-2732870 None:intergenic 45.0%
!! CAGGGCTTTTCTTTAGCTCA+AGG + chr4_4:2732911-2732930 Msa0663810:intron 45.0%
! TCAAGGGTTTTCTCGCAGTT+GGG + chr4_4:2732928-2732947 Msa0663810:intron 45.0%
! GTTTTCTCGCAGTTGGGTTT+TGG + chr4_4:2732934-2732953 Msa0663810:intron 45.0%
ACCCTTCTGGTAGCTAATGA+GGG + chr4_4:2733058-2733077 Msa0663810:intron 45.0%
TCCCTCATTAGCTACCAGAA+GGG - chr4_4:2733062-2733081 None:intergenic 45.0%
!! TAGATCAGTTGGTAGCTACC+AGG + chr4_4:2733276-2733295 Msa0663810:intron 45.0%
!! AGATCAGTTGGTAGCTACCA+GGG + chr4_4:2733277-2733296 Msa0663810:intron 45.0%
TACCAGGGACATCAGTTGTA+GGG + chr4_4:2733292-2733311 Msa0663810:intron 45.0%
AGTGTGTGAATCTAACCACC+AGG + chr4_4:2733350-2733369 Msa0663810:intron 45.0%
TTGTTTGTCAAGTAGCCTGG+TGG - chr4_4:2733368-2733387 None:intergenic 45.0%
! ATGTTGACTGTCTCGGATAG+AGG - chr4_4:2733584-2733603 None:intergenic 45.0%
! TCAGTTTTACCTTCGGGCAA+GGG - chr4_4:2733737-2733756 None:intergenic 45.0%
! TTCAGTTTTACCTTCGGGCA+AGG - chr4_4:2733738-2733757 None:intergenic 45.0%
! ATGAACAGGTGCTTGGTGAT+GGG - chr4_4:2733935-2733954 None:intergenic 45.0%
! TATGAACAGGTGCTTGGTGA+TGG - chr4_4:2733936-2733955 None:intergenic 45.0%
AGAACGAAAAGGGAAGGGAA+TGG + chr4_4:2734262-2734281 Msa0663810:CDS 45.0%
AGGGAAGGGAATGGATAAAG+AGG + chr4_4:2734271-2734290 Msa0663810:CDS 45.0%
AAGGAGCAGATGAGAAGAAG+AGG + chr4_4:2734297-2734316 Msa0663810:CDS 45.0%
CAGATACCAAGTACACTGGT+CGG + chr4_4:2734334-2734353 Msa0663810:CDS 45.0%
GCACGAGATGCAATTCTCAA+TGG - chr4_4:2734428-2734447 None:intergenic 45.0%
! GTTAGGTAATGGTCACGTAG+CGG + chr4_4:2734518-2734537 Msa0663810:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAAATCA+GGG - chr4_4:2731767-2731786 None:intergenic 5.0%
!!! AAGTAATATATTTTTTATAT+TGG + chr4_4:2732555-2732574 Msa0663810:intron 5.0%
!! ATTAAATATTAATAAAATAG+TGG + chr4_4:2733553-2733572 Msa0663810:intron 5.0%
TTCAATGACTGAGCGAGCAC+TGG + chr4_4:2730289-2730308 Msa0663810:CDS 50.0%
CAATGTGTCAGTGTCGTGTC+CGG - chr4_4:2730416-2730435 None:intergenic 50.0%
TGTGAGTGTCCTATCGGACA+TGG + chr4_4:2730459-2730478 Msa0663810:intron 50.0%
TCCTATCGGACATGGACATG+TGG + chr4_4:2730467-2730486 Msa0663810:intron 50.0%
GGTGAGGTAATCACAGAGAG+TGG + chr4_4:2730593-2730612 Msa0663810:CDS 50.0%
TCACAGAGAGTGGACACCAT+TGG + chr4_4:2730603-2730622 Msa0663810:CDS 50.0%
CACAGAGAGTGGACACCATT+GGG + chr4_4:2730604-2730623 Msa0663810:CDS 50.0%
CAATGTCGAGACCAACCCAA+TGG - chr4_4:2730622-2730641 None:intergenic 50.0%
GACATTGCACCCTCAATGCT+TGG + chr4_4:2730635-2730654 Msa0663810:CDS 50.0%
AGATATCGCATTGGAGCGTG+AGG + chr4_4:2730758-2730777 Msa0663810:intron 50.0%
! GTTCAGGGCGACCTTTTACT+CGG + chr4_4:2730780-2730799 Msa0663810:CDS 50.0%
!! CGACCTTTTACTCGGTGACA+TGG + chr4_4:2730788-2730807 Msa0663810:CDS 50.0%
GACCCATGTCACCGAGTAAA+AGG - chr4_4:2730794-2730813 None:intergenic 50.0%
! TTTACTCGGTGACATGGGTC+AGG + chr4_4:2730794-2730813 Msa0663810:CDS 50.0%
!! CAGGGTTTAGGGCTTCGTTT+TGG + chr4_4:2731469-2731488 Msa0663810:intron 50.0%
GGAATGTTTGATGGGGCCAT+CGG + chr4_4:2731490-2731509 Msa0663810:CDS 50.0%
!! TAGTGGTGGATTATCGGGAC+AGG + chr4_4:2732093-2732112 Msa0663810:CDS 50.0%
TTTGGGCTTAGGGCCTAACT+CGG + chr4_4:2732224-2732243 Msa0663810:intron 50.0%
ATGGGAAATCCTCCCGAGTT+AGG - chr4_4:2732240-2732259 None:intergenic 50.0%
TAACTCGGGAGGATTTCCCA+TGG + chr4_4:2732239-2732258 Msa0663810:intron 50.0%
GTTGAAACTCTCTTCTGCGC+AGG - chr4_4:2732721-2732740 None:intergenic 50.0%
ACGGAGGTTGACAAAGGTAG+AGG - chr4_4:2732861-2732880 None:intergenic 50.0%
ACTAGGCTAAGAGTGGGTCT+GGG - chr4_4:2732884-2732903 None:intergenic 50.0%
AACTAGGCTAAGAGTGGGTC+TGG - chr4_4:2732885-2732904 None:intergenic 50.0%
! CTCAAGGGTTTTCTCGCAGT+TGG + chr4_4:2732927-2732946 Msa0663810:intron 50.0%
TCCACCCCTTGTATTCTCTG+AGG + chr4_4:2733010-2733029 Msa0663810:intron 50.0%
CCACCCCTTGTATTCTCTGA+GGG + chr4_4:2733011-2733030 Msa0663810:intron 50.0%
CACCCCTTGTATTCTCTGAG+GGG + chr4_4:2733012-2733031 Msa0663810:intron 50.0%
!! CCTTCCGGTGCTGTATATGA+GGG - chr4_4:2733038-2733057 None:intergenic 50.0%
!! TCCTTCCGGTGCTGTATATG+AGG - chr4_4:2733039-2733058 None:intergenic 50.0%
GACCCTTCTGGTAGCTAATG+AGG + chr4_4:2733057-2733076 Msa0663810:intron 50.0%
GTCCCTCATTAGCTACCAGA+AGG - chr4_4:2733063-2733082 None:intergenic 50.0%
CTACCAGGGACATCAGTTGT+AGG + chr4_4:2733291-2733310 Msa0663810:intron 50.0%
ACCAGGGACATCAGTTGTAG+GGG + chr4_4:2733293-2733312 Msa0663810:intron 50.0%
! GACTTTGGTCACAAAGCACC+TGG + chr4_4:2733890-2733909 Msa0663810:intron 50.0%
TGCCTGAAATGCCCTTATGC+TGG + chr4_4:2734108-2734127 Msa0663810:intron 50.0%
GCCTGAAATGCCCTTATGCT+GGG + chr4_4:2734109-2734128 Msa0663810:intron 50.0%
CCTGAAATGCCCTTATGCTG+GGG + chr4_4:2734110-2734129 Msa0663810:intron 50.0%
CCAGTGTACTTGGTATCTGG+AGG - chr4_4:2734333-2734352 None:intergenic 50.0%
CCTCCAGATACCAAGTACAC+TGG + chr4_4:2734330-2734349 Msa0663810:CDS 50.0%
CGACCAGTGTACTTGGTATC+TGG - chr4_4:2734336-2734355 None:intergenic 50.0%
CCAAGTACACTGGTCGGAAA+CGG + chr4_4:2734340-2734359 Msa0663810:CDS 50.0%
GCCACATGTCCATGTCCGAT+AGG - chr4_4:2730471-2730490 None:intergenic 55.0%
GGTTGTGGATCGGGACTTAG+CGG + chr4_4:2730572-2730591 Msa0663810:intron 55.0%
GAGAGTGGACACCATTGGGT+TGG + chr4_4:2730608-2730627 Msa0663810:CDS 55.0%
GCATTGGAGCGTGAGGTTCA+GGG + chr4_4:2730765-2730784 Msa0663810:CDS 55.0%
TTGGGCTTAGGGCCTAACTC+GGG + chr4_4:2732225-2732244 Msa0663810:intron 55.0%
AATAGCAGCTGTGGGCGATG+TGG + chr4_4:2732632-2732651 Msa0663810:intron 55.0%
!! TGGCTAGTCTCTGCCACACA+CGG + chr4_4:2732660-2732679 Msa0663810:intron 55.0%
!! GAAGAGCATTGCGCTGCTAC+AGG + chr4_4:2732763-2732782 Msa0663810:intron 55.0%
! TCTGGGACGGAGGTTGACAA+AGG - chr4_4:2732867-2732886 None:intergenic 55.0%
CCCTCAGAGAATACAAGGGG+TGG - chr4_4:2733014-2733033 None:intergenic 55.0%
GGCCCCTCAGAGAATACAAG+GGG - chr4_4:2733017-2733036 None:intergenic 55.0%
GGGCCCCTCAGAGAATACAA+GGG - chr4_4:2733018-2733037 None:intergenic 55.0%
AGGGCCCCTCAGAGAATACA+AGG - chr4_4:2733019-2733038 None:intergenic 55.0%
! CCCTCATATACAGCACCGGA+AGG + chr4_4:2733035-2733054 Msa0663810:intron 55.0%
AGCTACCAGAAGGGTCCTTC+CGG - chr4_4:2733053-2733072 None:intergenic 55.0%
GACTGTCTCGGATAGAGGAG+TGG - chr4_4:2733579-2733598 None:intergenic 55.0%
!! CAAGAAGTACCCTTGCCCGA+AGG + chr4_4:2733725-2733744 Msa0663810:CDS 55.0%
!! CCCCAGCATAAGGGCATTTC+AGG - chr4_4:2734113-2734132 None:intergenic 55.0%
CCGTTTCCGACCAGTGTACT+TGG - chr4_4:2734343-2734362 None:intergenic 55.0%
TGGATCGGGACTTAGCGGTG+AGG + chr4_4:2730577-2730596 Msa0663810:CDS 60.0%
CGCATTGGAGCGTGAGGTTC+AGG + chr4_4:2730764-2730783 Msa0663810:CDS 60.0%
CTGTGGGCGATGTGGAACAG+TGG + chr4_4:2732640-2732659 Msa0663810:intron 60.0%
CTAGTCTCTGCCACACACGG+CGG + chr4_4:2732663-2732682 Msa0663810:intron 60.0%
!! AGGTAGAGGTTGATGGCGGC+TGG - chr4_4:2732847-2732866 None:intergenic 60.0%
! TAAGAGTGGGTCTGGGACGG+AGG - chr4_4:2732877-2732896 None:intergenic 60.0%
GGCTAAGAGTGGGTCTGGGA+CGG - chr4_4:2732880-2732899 None:intergenic 60.0%
GGGGCCCTCATATACAGCAC+CGG + chr4_4:2733031-2733050 Msa0663810:intron 60.0%
GCCCCTACAACTGATGTCCC+TGG - chr4_4:2733297-2733316 None:intergenic 60.0%
GAAGACGACGACGACGACAG+TGG + chr4_4:2733755-2733774 Msa0663810:CDS 60.0%
ACCAGAGGCGGTAGCTCCAC+CGG + chr4_4:2730104-2730123 Msa0663810:CDS 65.0%
GGCTTAGGGCCTAACTCGGG+AGG + chr4_4:2732228-2732247 Msa0663810:intron 65.0%
TGCCACACACGGCGGAACAG+TGG + chr4_4:2732671-2732690 Msa0663810:intron 65.0%
AGCCACTGTTCCGCCGTGTG+TGG - chr4_4:2732676-2732695 None:intergenic 65.0%
CCTCGTTCCCTGGTTGCCAC+CGG + chr4_4:2732801-2732820 Msa0663810:intron 65.0%
TGGAACGCCGGTGGCAACCA+GGG - chr4_4:2732811-2732830 None:intergenic 65.0%
ATGGAACGCCGGTGGCAACC+AGG - chr4_4:2732812-2732831 None:intergenic 65.0%
GATGGCAGGGGATGGAACGC+CGG - chr4_4:2732823-2732842 None:intergenic 65.0%
!! AGGTTGATGGCGGCTGGCGA+TGG - chr4_4:2732841-2732860 None:intergenic 65.0%
! CAGCACCGGAAGGACCCTTC+TGG + chr4_4:2733045-2733064 Msa0663810:intron 65.0%
TCCGGTGGAGCTACCGCCTC+TGG - chr4_4:2730108-2730127 None:intergenic 70.0%
CCGGTGGCAACCAGGGAACG+AGG - chr4_4:2732804-2732823 None:intergenic 70.0%
ATGGCGGCTGGCGATGGCAG+GGG - chr4_4:2732835-2732854 None:intergenic 70.0%
! GATGGCGGCTGGCGATGGCA+GGG - chr4_4:2732836-2732855 None:intergenic 70.0%
!! TGATGGCGGCTGGCGATGGC+AGG - chr4_4:2732837-2732856 None:intergenic 70.0%
GGCAGGGGATGGAACGCCGG+TGG - chr4_4:2732820-2732839 None:intergenic 75.0%
CGGCTGGCGATGGCAGGGGA+TGG - chr4_4:2732831-2732850 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 2730093 2734655 2730093 ID=Msa0663810;Name=Msa0663810
chr4_4 mRNA 2730093 2734655 2730093 ID=Msa0663810-mRNA-1;Parent=Msa0663810;Name=Msa0663810-mRNA-1;_AED=0.59;_eAED=0.59;_QI=0|0.12|0.11|0.22|1|1|9|278|283
chr4_4 exon 2730093 2730191 2730093 ID=Msa0663810-mRNA-1:exon:788;Parent=Msa0663810-mRNA-1
chr4_4 exon 2730287 2730362 2730287 ID=Msa0663810-mRNA-1:exon:789;Parent=Msa0663810-mRNA-1
chr4_4 exon 2730573 2730656 2730573 ID=Msa0663810-mRNA-1:exon:790;Parent=Msa0663810-mRNA-1
chr4_4 exon 2730760 2730815 2730760 ID=Msa0663810-mRNA-1:exon:791;Parent=Msa0663810-mRNA-1
chr4_4 exon 2731472 2731528 2731472 ID=Msa0663810-mRNA-1:exon:792;Parent=Msa0663810-mRNA-1
chr4_4 exon 2731802 2731851 2731802 ID=Msa0663810-mRNA-1:exon:793;Parent=Msa0663810-mRNA-1
chr4_4 exon 2731962 2732114 2731962 ID=Msa0663810-mRNA-1:exon:794;Parent=Msa0663810-mRNA-1
chr4_4 exon 2733685 2733796 2733685 ID=Msa0663810-mRNA-1:exon:795;Parent=Msa0663810-mRNA-1
chr4_4 exon 2734213 2734655 2734213 ID=Msa0663810-mRNA-1:exon:796;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2730093 2730191 2730093 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2730287 2730362 2730287 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2730573 2730656 2730573 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2730760 2730815 2730760 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2731472 2731528 2731472 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2731802 2731851 2731802 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2731962 2732114 2731962 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2733685 2733796 2733685 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 CDS 2734213 2734377 2734213 ID=Msa0663810-mRNA-1:cds;Parent=Msa0663810-mRNA-1
chr4_4 three_prime_UTR 2734378 2734655 2734378 ID=Msa0663810-mRNA-1:three_prime_utr;Parent=Msa0663810-mRNA-1
Gene Sequence

>Msa0663810

ATGGGTTCAAGACCAGAGGCGGTAGCTCCACCGGAGATATTTTACGACGATGATACAGCACGGAAATATACCTCTAATTCCCGTAACATTGAAATTCAGACTTCAATGACTGAGCGAGCACTGGAGCTTCTCAATTTACCCAATGACGGTGTTCCTAAGTTACTCCTTGACATTGGTTGTGGATCGGGACTTAGCGGTGAGGTAATCACAGAGAGTGGACACCATTGGGTTGGTCTCGACATTGCACCCTCAATGCTTGATATCGCATTGGAGCGTGAGGTTCAGGGCGACCTTTTACTCGGTGACATGGGTCAGGGTTTAGGGCTTCGTTTTGGAATGTTTGATGGGGCCATCGGTATATCTGCCATTCAGTGGTTATGTAATGCTGATAAATCCTCTCACAACCCTCATCTAAGATTGAAGGCTTTTTTTACATCCTTATACAAATGCTTGACAAATGGTGCTAGAGCAGTATTTCAAGTGTATCCAGAAAACGATGATCAACGTGTATTGATGTTGAGTCCTGCAATGAAAGCTGGATTTACTGGGGGTATAGTGGTGGATTATCGGGACAGTCCTAAGAAGAGAAAAGAGTATCTTTTTCTCGTATGTGGTCAAGAAGTACCCTTGCCCGAAGGTAAAACTGAAGACGACGACGACGACAGTGGAAGTGAAACAAATAAAACAGTATATGTTTTAGACAGAAATAGACCTTGGAAGAAACAGAAATATAATAAGAACGAAAAGGGAAGGGAATGGATAAAGAGGAAGAAGGAGCAGATGAGAAGAAGAGGAGATGATGTTCCTCCAGATACCAAGTACACTGGTCGGAAACGGAAAAATCGCTTTTGA

Protein sequence

>Msa0663810

MGSRPEAVAPPEIFYDDDTARKYTSNSRNIEIQTSMTERALELLNLPNDGVPKLLLDIGCGSGLSGEVITESGHHWVGLDIAPSMLDIALEREVQGDLLLGDMGQGLGLRFGMFDGAIGISAIQWLCNADKSSHNPHLRLKAFFTSLYKCLTNGARAVFQVYPENDDQRVLMLSPAMKAGFTGGIVVDYRDSPKKRKEYLFLVCGQEVPLPEGKTEDDDDDSGSETNKTVYVLDRNRPWKKQKYNKNEKGREWIKRKKEQMRRRGDDVPPDTKYTGRKRKNRF*