AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475600 MtrunA17_Chr3g0133201 97.632 760 17 1 1 760 1 759 0.0 1547
Msa0475600 MtrunA17_Chr2g0325981 33.670 297 168 7 14 310 14 281 6.46e-38 148
Msa0475600 MtrunA17_Chr2g0325981 34.848 132 76 3 612 742 303 425 4.52e-15 78.6
Msa0475600 MtrunA17_Chr1g0211421 31.206 282 154 8 31 307 33 279 1.03e-30 127
Msa0475600 MtrunA17_Chr1g0211421 43.860 114 60 2 585 695 296 408 6.41e-20 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475600 AT5G10940.2 68.068 761 235 7 1 760 1 754 0.0 1064
Msa0475600 AT5G10940.1 67.759 763 237 7 1 760 1 757 0.0 1062
Msa0475600 AT3G45620.1 34.114 299 171 8 13 310 17 290 2.28e-38 149
Msa0475600 AT3G45620.1 43.750 96 51 2 600 693 298 392 4.49e-17 85.5
Msa0475600 AT3G45620.2 34.915 295 165 9 35 327 73 342 3.14e-37 147
Msa0475600 AT3G45620.2 43.750 96 51 2 600 693 332 426 5.21e-17 85.5
Msa0475600 AT4G38480.2 29.315 365 200 11 37 392 8 323 7.80e-32 129
Msa0475600 AT4G38480.2 48.810 84 42 1 612 695 268 350 5.29e-17 84.7
Msa0475600 AT4G38480.1 29.315 365 200 11 37 392 41 356 1.26e-31 129
Msa0475600 AT4G38480.1 48.810 84 42 1 612 695 301 383 5.82e-17 85.1
Msa0475600 AT4G35140.1 31.250 272 157 8 36 307 44 285 8.57e-30 124
Msa0475600 AT4G35140.1 48.780 82 41 1 614 695 327 407 2.21e-17 86.3
Msa0475600 AT4G35140.2 31.250 272 157 8 36 307 44 285 1.40e-29 124
Msa0475600 AT4G35140.2 48.780 82 41 1 614 695 327 407 5.11e-17 85.5

Find 205 sgRNAs with CRISPR-Local

Find 861 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATGGCAGATGGTTTATT+TGG 0.174052 3_3:-78903899 Msa0475600:CDS
AATGGCTACAATCATATTAT+TGG 0.188384 3_3:-78908686 Msa0475600:CDS
ACATGCCTCAATTCCATAAT+AGG 0.196131 3_3:+78908721 None:intergenic
GATATGAAGCAGAGGTTTAT+TGG 0.225807 3_3:-78905336 Msa0475600:CDS
AACAAAAGTTATCCCGTAAT+AGG 0.237900 3_3:-78903501 Msa0475600:CDS
GAAACATGGAAAGTAAATTA+TGG 0.240219 3_3:-78902266 Msa0475600:three_prime_UTR
GAATTCAAAAGGTTCATTAT+TGG 0.253318 3_3:-78913603 Msa0475600:CDS
GTGAAAATCGGTGAATCTTT+AGG 0.266556 3_3:+78902835 None:intergenic
TCTTTCAGCAACTTCAGATT+TGG 0.271572 3_3:+78907328 None:intergenic
GGAAACTCATGCATTCTAAA+TGG 0.278208 3_3:+78902899 None:intergenic
ACTTACTCTCCAAGCGTTAA+TGG 0.282521 3_3:-78908994 Msa0475600:CDS
GTTCTGTCTTCCAAACAATA+AGG 0.293184 3_3:+78901987 None:intergenic
CCGAAAATCATGTTGTCTTA+AGG 0.300925 3_3:+78912922 None:intergenic
ACAAGCTCATCAGATGTTTC+TGG 0.301340 3_3:+78913317 None:intergenic
ATCGGTGAATCTTTAGGTTT+GGG 0.313382 3_3:+78902841 None:intergenic
CACTCGCAGGGTCAAGAAAT+TGG 0.314883 3_3:-78913110 Msa0475600:CDS
TGTCTGGGGTTGGGTTGGAG+GGG 0.315068 3_3:-78914598 Msa0475600:five_prime_UTR
CTTACTCTCCAAGCGTTAAT+GGG 0.318840 3_3:-78908993 Msa0475600:CDS
AGTGTCTGGGGTTGGGTTGG+AGG 0.320838 3_3:-78914600 Msa0475600:five_prime_UTR
CTTCATATCAATAGCTGCTT+CGG 0.322899 3_3:+78905350 None:intergenic
CCCAACACATCACCAGTTTC+TGG 0.324612 3_3:+78903541 None:intergenic
TACTATAGTCCCTTATTGTT+TGG 0.338388 3_3:-78901997 Msa0475600:three_prime_UTR
TTCGGCGGTACTTGTGAATC+TGG 0.352998 3_3:-78902346 Msa0475600:three_prime_UTR
ATATGAAGCAGAGGTTTATT+GGG 0.354463 3_3:-78905335 Msa0475600:CDS
AGTAAATTATGGGTATTATC+TGG 0.357292 3_3:-78902255 Msa0475600:three_prime_UTR
AATCGGTGAATCTTTAGGTT+TGG 0.358671 3_3:+78902840 None:intergenic
TTTAAAGCAAGGACTTGTTT+AGG 0.359050 3_3:+78911274 None:intergenic
CTGGCACTCCATACCACATT+GGG 0.375249 3_3:+78912956 None:intergenic
GGGAAAACACAAAGAAGCTT+TGG 0.378408 3_3:-78907384 Msa0475600:CDS
TGCTGTTGCTTCCCACTCGC+TGG 0.382906 3_3:-78907357 Msa0475600:CDS
TTTGCTGATATACTGTGTAT+AGG 0.384474 3_3:-78902137 Msa0475600:three_prime_UTR
GGCAGGTTCGGTTATTCAAC+AGG 0.385096 3_3:-78913198 Msa0475600:intron
AGGGCGAGAGTGAAGGTATC+TGG 0.386886 3_3:+78914391 None:intergenic
TGATGGCAGATGGTTTATTT+GGG 0.402572 3_3:-78903898 Msa0475600:CDS
TTCAACAGGTCTCGCGTAAG+TGG 0.403404 3_3:-78913184 Msa0475600:CDS
ACAAAAGTTATCCCGTAATA+GGG 0.403715 3_3:-78903500 Msa0475600:CDS
CAGCATTGAATCCCTATTAC+GGG 0.403849 3_3:+78903489 None:intergenic
GGAGAATGTGAAGAAGGATA+TGG 0.404468 3_3:-78907303 Msa0475600:CDS
CTCATTTGCTCCTTGTTGGT+GGG 0.405778 3_3:-78911225 Msa0475600:CDS
AAACATGGAAAGTAAATTAT+GGG 0.407287 3_3:-78902265 Msa0475600:three_prime_UTR
ACAGCATTGAATCCCTATTA+CGG 0.407538 3_3:+78903488 None:intergenic
TTTAAAATGTCTCCCATGCT+TGG 0.407815 3_3:+78902300 None:intergenic
TATTGGACCTGCACTAAAAC+AGG 0.410617 3_3:-78908669 Msa0475600:CDS
AAAGGTTCATTATTGGTATC+CGG 0.412483 3_3:-78913596 Msa0475600:CDS
GTTTCCAATGTCTTCACAAA+TGG 0.414037 3_3:-78908952 Msa0475600:CDS
TCTGTAGCTGGTGGTTCTGC+AGG 0.414277 3_3:-78903565 Msa0475600:CDS
GTGTCTGGGGTTGGGTTGGA+GGG 0.424152 3_3:-78914599 Msa0475600:five_prime_UTR
AGGAAAGAAGAAGAAGTGTC+TGG 0.424323 3_3:-78914614 None:intergenic
AGACCTCATTTGCTCCTTGT+TGG 0.424397 3_3:-78911229 Msa0475600:CDS
TCTGATGAGCTTGTAGCCTC+TGG 0.428757 3_3:-78913308 Msa0475600:CDS
TCGTGCTGCACTATTGCTTA+AGG 0.429248 3_3:-78908633 Msa0475600:intron
CTGATGAGCTTGTAGCCTCT+GGG 0.430082 3_3:-78913307 Msa0475600:CDS
CATGCCTCAATTCCATAATA+GGG 0.432767 3_3:+78908722 None:intergenic
TTCATATCAATAGCTGCTTC+GGG 0.434684 3_3:+78905351 None:intergenic
TGATTTGAGTAGGGACATCT+TGG 0.434899 3_3:-78913647 Msa0475600:intron
GCTATTGCTTGGAATTCAAA+AGG 0.436372 3_3:-78913614 Msa0475600:CDS
TTCTGATTATGACGAGGAAA+TGG 0.437348 3_3:-78906845 Msa0475600:CDS
CCTGTTGCATCTTCTGTAGC+TGG 0.440848 3_3:-78903577 Msa0475600:CDS
CCTCATTTGCTCCTTGTTGG+TGG 0.442952 3_3:-78911226 Msa0475600:CDS
GTGAAGACATTGGAAACAAA+AGG 0.443687 3_3:+78908958 None:intergenic
AAAATATGCTAAGAAGTCAT+TGG 0.444166 3_3:-78908756 Msa0475600:CDS
TTCTGTCTTCCAAACAATAA+GGG 0.444246 3_3:+78901988 None:intergenic
TGGGATTGATAACACGATAA+AGG 0.444355 3_3:-78903698 Msa0475600:intron
AAACAACATCGATTCTTCAA+TGG 0.446663 3_3:-78914459 Msa0475600:exon
AAGAAGAAGTGTCTGGGGTT+GGG 0.451576 3_3:-78914607 Msa0475600:five_prime_UTR
GAGCTTGTAGCCTCTGGGGC+TGG 0.452286 3_3:-78913302 Msa0475600:CDS
AGAAGTGTCTGGGGTTGGGT+TGG 0.455203 3_3:-78914603 Msa0475600:five_prime_UTR
ATCAATGTTTGGAGCTATGC+TGG 0.456735 3_3:-78913404 Msa0475600:CDS
CTATTGTTGGAGATAAGTTA+AGG 0.460225 3_3:+78902203 None:intergenic
TCTTAAGGTTCCATCTTCAC+TGG 0.461289 3_3:+78912937 None:intergenic
CGCAAGCGTAGTGATCCTTC+AGG 0.461853 3_3:+78902878 None:intergenic
GAAGAAGAAGTGTCTGGGGT+TGG 0.462545 3_3:-78914608 Msa0475600:five_prime_UTR
CAGCAACTTCAGATTTGGAT+GGG 0.464824 3_3:+78907333 None:intergenic
CATGTTACATTTAGTCCTGA+TGG 0.469413 3_3:-78910140 Msa0475600:CDS
TGTATGTTTCCGTCGAGAAA+AGG 0.472053 3_3:+78914428 None:intergenic
GTTGCCACAACAAAATCAAA+TGG 0.472347 3_3:+78903724 None:intergenic
TGGTGATGTGTTGGGTGCTA+TGG 0.474086 3_3:-78903533 Msa0475600:CDS
TTTATTTGGGAAAAGCGAAC+TGG 0.476711 3_3:-78903885 Msa0475600:CDS
TTTATTGGGCACTGCAATGT+GGG 0.483595 3_3:-78905321 Msa0475600:CDS
CTAGAACATTGTGACACTCT+TGG 0.484612 3_3:+78912864 None:intergenic
GTTGTGTCAATGCTATTGCT+TGG 0.484883 3_3:-78913625 Msa0475600:CDS
CTGATTCAAATATTCTTCAC+CGG 0.487076 3_3:-78906777 Msa0475600:CDS
TGTGGGGACTGATATAAAAC+AGG 0.487794 3_3:-78905304 Msa0475600:CDS
GGCACCTCTTGTCCTCCTGC+AGG 0.488598 3_3:-78912896 Msa0475600:CDS
TTGCACGTCTGTATGATAGA+AGG 0.488823 3_3:-78911110 Msa0475600:CDS
GCCAATGTCAGCTTGACTTA+CGG 0.491366 3_3:-78911327 Msa0475600:intron
GTTGCCAGCGGTAGCGATGA+TGG 0.491901 3_3:-78903915 Msa0475600:CDS
AGGTCTCGCGTAAGTGGGAA+TGG 0.492402 3_3:-78913178 Msa0475600:CDS
TAGGTTTGGGCACATTCAAA+AGG 0.492710 3_3:+78902854 None:intergenic
ACCACTGCAGGTGCTATGTT+CGG 0.498241 3_3:-78902364 Msa0475600:intron
ACTTACCAGCAGGTGAAAAT+CGG 0.501154 3_3:+78902823 None:intergenic
GACTTCGAAACATCAGTGTC+TGG 0.503513 3_3:-78906817 Msa0475600:CDS
GAATATATTTGCAGTATGTC+CGG 0.507668 3_3:+78913355 None:intergenic
TAAAGTGCTGATGGAGTAAT+GGG 0.508030 3_3:+78913142 None:intergenic
GTATGGAGTGCCAGTGAAGA+TGG 0.508251 3_3:-78912947 Msa0475600:CDS
ATGGAAACCCCAATGTGGTA+TGG 0.509468 3_3:-78912964 Msa0475600:CDS
GGTTCTGCAGGACCAGAAAC+TGG 0.510294 3_3:-78903553 Msa0475600:CDS
TTGCTGAGTGGCGATGAATC+TGG 0.510859 3_3:-78903849 Msa0475600:intron
TCAGCAACTTCAGATTTGGA+TGG 0.514086 3_3:+78907332 None:intergenic
AGGAGAACCTCAGATCCATC+AGG 0.514318 3_3:+78910125 None:intergenic
ACATGAGTTAAGTGCAAACT+TGG 0.515218 3_3:+78910158 None:intergenic
AATTCTACCCCATTAACGCT+TGG 0.516355 3_3:+78908985 None:intergenic
GGAAAGAAGAAGAAGTGTCT+GGG 0.517005 3_3:-78914613 None:intergenic
AAGAGTGGAGAATGTGAAGA+AGG 0.518345 3_3:-78907309 Msa0475600:CDS
GCTTCTGACATGTAGTAAAG+TGG 0.519345 3_3:+78908421 None:intergenic
AATGGTTCTAAGAGCTCAAA+GGG 0.521850 3_3:+78902917 None:intergenic
CCAGCTACAGAAGATGCAAC+AGG 0.527365 3_3:+78903577 None:intergenic
CTGGATTGAGATGATTCAGA+TGG 0.527915 3_3:-78902327 Msa0475600:three_prime_UTR
CATGCTCTCCGCTATAGCTC+AGG 0.528027 3_3:+78910105 None:intergenic
ACCTCGACATCCAGAGGAAG+TGG 0.528915 3_3:-78908513 Msa0475600:intron
TACCCGCGTATCATCTGATC+CGG 0.530277 3_3:+78913577 None:intergenic
ATATCAGCAAACATGGCAAT+CGG 0.532176 3_3:+78902149 None:intergenic
TTCAGATGGGGAGCCAAGCA+TGG 0.533212 3_3:-78902313 Msa0475600:three_prime_UTR
ATTTGCTCCTTGTTGGTGGG+AGG 0.536719 3_3:-78911222 Msa0475600:intron
TTATGACGAGGAAATGGAGT+TGG 0.536741 3_3:-78906839 Msa0475600:CDS
GAAGATGCAACAGGAGCACT+TGG 0.539197 3_3:+78903586 None:intergenic
AGCAAGACAAATAATGGAAG+AGG 0.541036 3_3:-78906958 Msa0475600:CDS
ATTTCTTGACCCTGCGAGTG+TGG 0.544999 3_3:+78913113 None:intergenic
TGACCCTGCGAGTGTGGCAC+TGG 0.545984 3_3:+78913119 None:intergenic
CCACCAACAAGGAGCAAATG+AGG 0.546459 3_3:+78911226 None:intergenic
TTTACCAGTGCCACACTCGC+AGG 0.546843 3_3:-78913123 Msa0475600:CDS
CCAGAAACTGGTGATGTGTT+GGG 0.549316 3_3:-78903541 Msa0475600:CDS
TAAGAGACTGCCATGCTGCT+AGG 0.550036 3_3:-78908468 Msa0475600:CDS
TGCTAAGAAGTCATTGGACG+AGG 0.553143 3_3:-78908750 Msa0475600:CDS
CATGTCAGAAGCATTGTCTC+AGG 0.555320 3_3:-78908410 Msa0475600:intron
ATCTGAAGTTGCTGAAAGAG+TGG 0.556156 3_3:-78907324 Msa0475600:CDS
ACCAGAAACTGGTGATGTGT+TGG 0.557320 3_3:-78903542 Msa0475600:CDS
TAATTAACACAAGGAGGTGG+AGG 0.557896 3_3:+78911051 None:intergenic
TCTGCCATCATCGCTACCGC+TGG 0.558595 3_3:+78903911 None:intergenic
AATAGTGATACTTCACAAGA+TGG 0.563306 3_3:-78906889 Msa0475600:CDS
TATCACTATTAGCCTCTGTC+CGG 0.564294 3_3:+78906902 None:intergenic
TGGATTGAGATGATTCAGAT+GGG 0.565147 3_3:-78902326 Msa0475600:three_prime_UTR
AATGGAGCTAAAAGATCCCT+TGG 0.565541 3_3:-78911304 Msa0475600:CDS
ATTTAGTCCTGATGGATCTG+AGG 0.565686 3_3:-78910132 Msa0475600:CDS
AAAACCATTTGTGAAGACAT+TGG 0.566595 3_3:+78908948 None:intergenic
AGCAACTTCAGATTTGGATG+GGG 0.566604 3_3:+78907334 None:intergenic
TACTTGATGAATGTAAATCA+TGG 0.567455 3_3:-78910080 Msa0475600:intron
TTGTACAGCTTGACAAGTGT+AGG 0.567850 3_3:-78908787 Msa0475600:intron
AGAGAAAATGCTGAAGCAAG+TGG 0.569479 3_3:-78906718 Msa0475600:CDS
ACTGGCACTCCATACCACAT+TGG 0.569853 3_3:+78912955 None:intergenic
TCTTGGTGTGGAGATCCTGC+AGG 0.570087 3_3:+78912881 None:intergenic
AAATGGTTCTAAGAGCTCAA+AGG 0.570232 3_3:+78902916 None:intergenic
ACACGATCAGAAAGGTGCAT+TGG 0.572900 3_3:+78911021 None:intergenic
GTAAAGTGCTGATGGAGTAA+TGG 0.573994 3_3:+78913141 None:intergenic
GGCACCCTATTATGGAATTG+AGG 0.576190 3_3:-78908726 Msa0475600:CDS
AAAGCAAGGACTTGTTTAGG+AGG 0.578216 3_3:+78911277 None:intergenic
CATTAAGTGACATTCTCTAC+CGG 0.578864 3_3:-78906921 Msa0475600:CDS
TGGCACTGGTAAAGTGCTGA+TGG 0.583049 3_3:+78913133 None:intergenic
TTTGGATGGGGCCAGCGAGT+GGG 0.587431 3_3:+78907346 None:intergenic
TGTCAGCTTGACTTACGGAA+TGG 0.587725 3_3:-78911322 Msa0475600:intron
AGAATGCATGAGTTTCCTGA+AGG 0.588086 3_3:-78902893 Msa0475600:CDS
ATTTGGATGGGGCCAGCGAG+TGG 0.588705 3_3:+78907345 None:intergenic
TCAACAGGTCTCGCGTAAGT+GGG 0.589372 3_3:-78913183 Msa0475600:CDS
AACATACAGGGCGAGAGTGA+AGG 0.592920 3_3:+78914384 None:intergenic
TCAGATGGGGAGCCAAGCAT+GGG 0.595746 3_3:-78902312 Msa0475600:three_prime_UTR
CTACCACCTCTAAGCTCCTG+TGG 0.596516 3_3:-78911084 Msa0475600:CDS
TCTATCATACAGACGTGCAA+AGG 0.599078 3_3:+78911113 None:intergenic
AACATCAGTGTCTGGTGACG+AGG 0.600611 3_3:-78906809 Msa0475600:CDS
GAATGGTAGAGCTTCATACC+AGG 0.601199 3_3:-78906659 Msa0475600:intron
AAATGCTGAAGCAAGTGGCT+CGG 0.603472 3_3:-78906713 Msa0475600:CDS
AGAAAGTCTGCGAATCAAAG+AGG 0.604255 3_3:+78914189 None:intergenic
GAATTCTACGATTCATACTC+CGG 0.607159 3_3:+78906758 None:intergenic
AAGATGGTCAGAGATCTGAC+AGG 0.608777 3_3:-78906873 Msa0475600:CDS
GTTTATTGGGCACTGCAATG+TGG 0.610985 3_3:-78905322 Msa0475600:CDS
AAATAATTAACACAAGGAGG+TGG 0.612689 3_3:+78911048 None:intergenic
AAGACAAATAATGGAAGAGG+TGG 0.615272 3_3:-78906955 Msa0475600:CDS
GAGGTTCTCCTGAGCTATAG+CGG 0.621542 3_3:-78910113 Msa0475600:CDS
ACACAGTATATCAGCAAACA+TGG 0.623834 3_3:+78902142 None:intergenic
TATCAAATTTCCTAGCAGCA+TGG 0.625346 3_3:+78908458 None:intergenic
GCGGTAGCGATGATGGCAGA+TGG 0.626278 3_3:-78903908 Msa0475600:CDS
AAGGACTAACACGATCAGAA+AGG 0.629433 3_3:+78911013 None:intergenic
GTAGTAAAGTGGTTTATATG+CGG 0.630842 3_3:+78908432 None:intergenic
TTATTGGGCACTGCAATGTG+GGG 0.632042 3_3:-78905320 Msa0475600:CDS
ATATGCAGCTGGTGTGAATG+AGG 0.632149 3_3:-78909052 Msa0475600:intron
AGATCCTGCAGGAGGACAAG+AGG 0.633325 3_3:+78912892 None:intergenic
GTTGCATCTTCTGTAGCTGG+TGG 0.634469 3_3:-78903574 Msa0475600:CDS
TTTCCACAGGAGCTTAGAGG+TGG 0.636308 3_3:+78911081 None:intergenic
TGATGAGCTTGTAGCCTCTG+GGG 0.636681 3_3:-78913306 Msa0475600:CDS
TTCAGCATCTCCAGCCCCAG+AGG 0.638233 3_3:+78913292 None:intergenic
TTACCAGTGCCACACTCGCA+GGG 0.639153 3_3:-78913122 Msa0475600:CDS
AATCGTAGAATTCATCGAAG+AGG 0.640411 3_3:-78906748 Msa0475600:CDS
CAGCTATTGATATGAAGCAG+AGG 0.640848 3_3:-78905344 Msa0475600:CDS
TTACTCTCCAAGCGTTAATG+GGG 0.644125 3_3:-78908992 Msa0475600:CDS
GCTAAGAAGTCATTGGACGA+GGG 0.646159 3_3:-78908749 Msa0475600:CDS
GAAAGAAGAAGAAGTGTCTG+GGG 0.650270 3_3:-78914612 None:intergenic
CTAAGAAGTCATTGGACGAG+GGG 0.654412 3_3:-78908748 Msa0475600:CDS
TGGTGTGGAGATCCTGCAGG+AGG 0.660029 3_3:+78912884 None:intergenic
ATACTTACCTCCCACCAACA+AGG 0.661870 3_3:+78911215 None:intergenic
CTTGTTTAGGAGGATCACCA+AGG 0.663151 3_3:+78911287 None:intergenic
GTTTCCGTCGAGAAAAGGAG+TGG 0.666174 3_3:+78914433 None:intergenic
ATAGGTGAATATGTTGCCAG+CGG 0.668912 3_3:-78903927 Msa0475600:intron
ATCCGGATCAGATGATACGC+GGG 0.672811 3_3:-78913579 Msa0475600:intron
TTGTTTAGGAGGATCACCAA+GGG 0.676840 3_3:+78911288 None:intergenic
AGATGGTCAGAGATCTGACA+GGG 0.684626 3_3:-78906872 Msa0475600:CDS
ACTGCAGGTGCTATGTTCGG+CGG 0.684957 3_3:-78902361 Msa0475600:intron
GGATTGAGATGATTCAGATG+GGG 0.686877 3_3:-78902325 Msa0475600:three_prime_UTR
ACATTGTGACACTCTTGGTG+TGG 0.695571 3_3:+78912869 None:intergenic
TGGCACTCCATACCACATTG+GGG 0.698757 3_3:+78912957 None:intergenic
TGACATTCTCTACCGGACAG+AGG 0.700100 3_3:-78906914 Msa0475600:CDS
TAAGAAGTCATTGGACGAGG+GGG 0.700147 3_3:-78908747 Msa0475600:CDS
CTAGTGCATTCAATTGACAC+CGG 0.709757 3_3:-78913374 Msa0475600:CDS
GGATGATTCTGATTATGACG+AGG 0.715295 3_3:-78906851 Msa0475600:CDS
TGAAAATGGAAACCCCAATG+TGG 0.715815 3_3:-78912969 Msa0475600:CDS
TATCCGGATCAGATGATACG+CGG 0.728105 3_3:-78913580 Msa0475600:CDS
AGACTCATGAAATTGCTGAG+TGG 0.779389 3_3:-78903861 Msa0475600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTTTTGTG+TGG - chr3_3:78905862-78905881 Msa0475600:intron 10.0%
!!! TTTTTTATTTTTTTTTGTGT+GGG - chr3_3:78905863-78905882 Msa0475600:intron 10.0%
!! AAAAAAAAAAAATACACTAA+TGG + chr3_3:78906142-78906161 None:intergenic 10.0%
!!! AATTAACTATTTTTAATTCA+GGG + chr3_3:78914501-78914520 None:intergenic 10.0%
!!! TAATTAACTATTTTTAATTC+AGG + chr3_3:78914502-78914521 None:intergenic 10.0%
!!! CAAACATATTTTAGAAAAAT+AGG + chr3_3:78902493-78902512 None:intergenic 15.0%
!!! TATCATTTTCTTAAAAATGT+TGG - chr3_3:78902789-78902808 Msa0475600:intron 15.0%
!!! ATGATAAACTTTTGATATAA+TGG - chr3_3:78904800-78904819 Msa0475600:intron 15.0%
!!! TGATAAACTTTTGATATAAT+GGG - chr3_3:78904801-78904820 Msa0475600:intron 15.0%
!!! ATTAAAATTAAAAGTGCAAA+TGG - chr3_3:78904890-78904909 Msa0475600:intron 15.0%
!!! TTAAAATTAAAAGTGCAAAT+GGG - chr3_3:78904891-78904910 Msa0475600:intron 15.0%
!!! ATTTACTTTTTACCAAAAAA+GGG + chr3_3:78905698-78905717 None:intergenic 15.0%
!!! TTTTTATTTTTTTTTGTGTG+GGG - chr3_3:78905864-78905883 Msa0475600:intron 15.0%
!! ATGTATGAAAATAATTGAAA+TGG + chr3_3:78906076-78906095 None:intergenic 15.0%
!!! ATCATATTTTCAAGTATATT+TGG + chr3_3:78906219-78906238 None:intergenic 15.0%
!! TAAGAAATAAAAAAGAAACA+AGG + chr3_3:78906566-78906585 None:intergenic 15.0%
!!! TCTTTTTCAATTTTAATGAT+TGG - chr3_3:78908049-78908068 Msa0475600:intron 15.0%
!!! TTTGTTTTTAATGAGAAATA+GGG - chr3_3:78908482-78908501 Msa0475600:CDS 15.0%
!! CACATAATATCATTAAAAAT+TGG + chr3_3:78909582-78909601 None:intergenic 15.0%
!!! CAATTTTTAATGATATTATG+TGG - chr3_3:78909580-78909599 Msa0475600:intron 15.0%
!!! TTATTAGTTTATTAACAGAA+TGG + chr3_3:78911181-78911200 None:intergenic 15.0%
!!! TATAATTTTATCTACTTCAA+GGG + chr3_3:78912409-78912428 None:intergenic 15.0%
!! CAAAATAAAAATTGCAAATA+AGG + chr3_3:78912634-78912653 None:intergenic 15.0%
!!! AATGTTTTGTAAACAAAAAT+TGG + chr3_3:78913964-78913983 None:intergenic 15.0%
!!! ATAGTGTTGATTTTTTAAAA+AGG - chr3_3:78914417-78914436 Msa0475600:CDS 15.0%
!!! GAAAAATAGGATAATGTTTT+AGG + chr3_3:78902480-78902499 None:intergenic 20.0%
!! AGAAAAAACATATGAAGTTA+GGG + chr3_3:78903380-78903399 None:intergenic 20.0%
!! AAGAAAAAACATATGAAGTT+AGG + chr3_3:78903381-78903400 None:intergenic 20.0%
!!! ACTTCATATGTTTTTTCTTT+TGG - chr3_3:78903382-78903401 Msa0475600:intron 20.0%
!! AAAAAAGAACATATAAGACA+TGG + chr3_3:78903606-78903625 None:intergenic 20.0%
!! TATCAAAAGTTTATCATAGA+GGG + chr3_3:78904797-78904816 None:intergenic 20.0%
!! ATATCAAAAGTTTATCATAG+AGG + chr3_3:78904798-78904817 None:intergenic 20.0%
!!! TTATTGACTTTCACATTTAA+TGG - chr3_3:78905252-78905271 Msa0475600:intron 20.0%
!!! GATTTACTTTTTACCAAAAA+AGG + chr3_3:78905699-78905718 None:intergenic 20.0%
!!! TGATAAAAAGCTTTTCTTTT+TGG - chr3_3:78905947-78905966 Msa0475600:intron 20.0%
!! ATTACTTCTGTATAATGATA+GGG + chr3_3:78906281-78906300 None:intergenic 20.0%
!! AATCATTAACTCACATTAAA+AGG - chr3_3:78906741-78906760 Msa0475600:CDS 20.0%
!! AAACTCTAACAAAACATTTA+AGG - chr3_3:78906812-78906831 Msa0475600:CDS 20.0%
!!! TTTTTTCTTTGTTCTTGAAT+TGG - chr3_3:78906847-78906866 Msa0475600:CDS 20.0%
!!! TTTTTCTTTGTTCTTGAATT+GGG - chr3_3:78906848-78906867 Msa0475600:CDS 20.0%
!!! CTAATTTATCATTAGGTTTT+TGG - chr3_3:78907085-78907104 Msa0475600:intron 20.0%
!! ATGAAAAAGCCTTTATTATA+AGG - chr3_3:78907208-78907227 Msa0475600:intron 20.0%
!! CTTCAAAATCTCAATTTATT+TGG + chr3_3:78907271-78907290 None:intergenic 20.0%
!! TTCTTAATATTACTAAACTG+CGG - chr3_3:78907991-78908010 Msa0475600:intron 20.0%
!!! GTTTGTTTTTAATGAGAAAT+AGG - chr3_3:78908481-78908500 Msa0475600:CDS 20.0%
!!! AATGTTTTGTTTCAGAATTA+AGG - chr3_3:78908572-78908591 Msa0475600:intron 20.0%
!! AAATTCATACATACTGTTAA+CGG + chr3_3:78909076-78909095 None:intergenic 20.0%
!!! ACTCATAACTGAATATTTTT+TGG - chr3_3:78909156-78909175 Msa0475600:intron 20.0%
!!! CTCATAACTGAATATTTTTT+GGG - chr3_3:78909157-78909176 Msa0475600:intron 20.0%
!! AAAAATAGCAAGACAAATAA+TGG - chr3_3:78909637-78909656 Msa0475600:intron 20.0%
!!! AACTTATGATGTTTTTGAAT+TGG + chr3_3:78910328-78910347 None:intergenic 20.0%
!! ATTCAAAAACATCATAAGTT+TGG - chr3_3:78910328-78910347 Msa0475600:intron 20.0%
!! TTCAAAAACATCATAAGTTT+GGG - chr3_3:78910329-78910348 Msa0475600:intron 20.0%
!!! TTTAGTTTTTTTTATGTGTG+TGG - chr3_3:78910422-78910441 Msa0475600:intron 20.0%
!!! TTAGTTTTTTTTATGTGTGT+GGG - chr3_3:78910423-78910442 Msa0475600:intron 20.0%
!!! TTGTTATTTCCTTGATTATT+AGG + chr3_3:78910599-78910618 None:intergenic 20.0%
!!! ATAGAATATTATTTCCGTTT+TGG - chr3_3:78911782-78911801 Msa0475600:intron 20.0%
!!! AGTTACTGTTTATTTTCATA+TGG - chr3_3:78911966-78911985 Msa0475600:intron 20.0%
!!! GTATAATTTTATCTACTTCA+AGG + chr3_3:78912410-78912429 None:intergenic 20.0%
!! ATCATTATTCTATGATGTAT+TGG - chr3_3:78912931-78912950 Msa0475600:CDS 20.0%
!! TCATTATTCTATGATGTATT+GGG - chr3_3:78912932-78912951 Msa0475600:CDS 20.0%
!!! AAAAAGAATAAGTTGAAACA+TGG - chr3_3:78914321-78914340 Msa0475600:intron 20.0%
!! AAACATGGAAAGTAAATTAT+GGG - chr3_3:78914336-78914355 Msa0475600:intron 20.0%
!! TAAAAAATCAACACTATTGT+TGG + chr3_3:78914414-78914433 None:intergenic 20.0%
! AGAATAAAGAGAAACATACA+GGG + chr3_3:78902232-78902251 None:intergenic 25.0%
! AAGAATAAAGAGAAACATAC+AGG + chr3_3:78902233-78902252 None:intergenic 25.0%
! ATCATCATGGAATTGAAAAT+CGG + chr3_3:78902280-78902299 None:intergenic 25.0%
! AAAGAAAAACAGCATTCTAT+TGG + chr3_3:78902354-78902373 None:intergenic 25.0%
! ACACTTATATTTCTTCAAAG+AGG - chr3_3:78902532-78902551 Msa0475600:intron 25.0%
! AAAATGATAACTATGCTTGT+AGG + chr3_3:78902778-78902797 None:intergenic 25.0%
! AGAATGTATATTCCAATCTA+TGG + chr3_3:78902825-78902844 None:intergenic 25.0%
! AAGTAAGATTTAAGAAACAC+CGG + chr3_3:78902851-78902870 None:intergenic 25.0%
! GAATTCAAAAGGTTCATTAT+TGG - chr3_3:78902998-78903017 Msa0475600:intron 25.0%
!! AAATTTTGCAGATCAATGTT+TGG - chr3_3:78903186-78903205 Msa0475600:intron 25.0%
!!! GATCCATTTGATATTTTTAG+CGG - chr3_3:78903337-78903356 Msa0475600:intron 25.0%
! GAAAAAACATATGAAGTTAG+GGG + chr3_3:78903379-78903398 None:intergenic 25.0%
! TTTCAATAACATTGCATCAA+TGG - chr3_3:78903553-78903572 Msa0475600:CDS 25.0%
! TTCAATAACATTGCATCAAT+GGG - chr3_3:78903554-78903573 Msa0475600:CDS 25.0%
!!! TCTTATATGTTCTTTTTTGC+AGG - chr3_3:78903608-78903627 Msa0475600:intron 25.0%
! ATTCGAATACTACAGATAAT+GGG + chr3_3:78903905-78903924 None:intergenic 25.0%
! TATTCGAATACTACAGATAA+TGG + chr3_3:78903906-78903925 None:intergenic 25.0%
! CTATGCTAAACTATGAAAAA+TGG + chr3_3:78904077-78904096 None:intergenic 25.0%
!! TTTTCATAGTTTAGCATAGA+AGG - chr3_3:78904078-78904097 Msa0475600:intron 25.0%
! ATCCAATAAAATCTTAAACC+AGG + chr3_3:78904123-78904142 None:intergenic 25.0%
!! ATTTTTCTCCGCATATTAAA+TGG - chr3_3:78904193-78904212 Msa0475600:intron 25.0%
!! TTTTTCTCCGCATATTAAAT+GGG - chr3_3:78904194-78904213 Msa0475600:intron 25.0%
!!! GCTCTGTTGATATTTTTTAT+TGG - chr3_3:78904308-78904327 Msa0475600:intron 25.0%
!! TGTATTGAATTTGCTTACAA+TGG - chr3_3:78904411-78904430 Msa0475600:intron 25.0%
! TATCATAGAGGGAATAAAAA+GGG + chr3_3:78904786-78904805 None:intergenic 25.0%
! TTATCATAGAGGGAATAAAA+AGG + chr3_3:78904787-78904806 None:intergenic 25.0%
! GAGCTGTATAATTGATATTA+TGG - chr3_3:78904952-78904971 Msa0475600:intron 25.0%
! AATTCCAGAGGATTAATAAA+AGG + chr3_3:78905012-78905031 None:intergenic 25.0%
! TCAATAAATGAAAAACACCA+AGG + chr3_3:78905239-78905258 None:intergenic 25.0%
!!! TATCGAAAGATTTTAAAGCA+AGG + chr3_3:78905341-78905360 None:intergenic 25.0%
! CAAAAATAATTAACACAAGG+AGG + chr3_3:78905559-78905578 None:intergenic 25.0%
! GGACAAAAATAATTAACACA+AGG + chr3_3:78905562-78905581 None:intergenic 25.0%
!! ATAGTAGAGTATTAAAGCAA+AGG + chr3_3:78905610-78905629 None:intergenic 25.0%
!!! TAACTGCTTTTGAAAAAGTA+TGG - chr3_3:78905630-78905649 Msa0475600:intron 25.0%
! TTCACTTAAAGCTTAAGTAT+TGG - chr3_3:78905658-78905677 Msa0475600:intron 25.0%
! TCACTTAAAGCTTAAGTATT+GGG - chr3_3:78905659-78905678 Msa0475600:intron 25.0%
! TTATGTCAACTTACTAACAA+AGG - chr3_3:78905989-78906008 Msa0475600:intron 25.0%
!! TATATACTTGTCTGAAGTAT+TGG - chr3_3:78906116-78906135 Msa0475600:intron 25.0%
! CATTACTTCTGTATAATGAT+AGG + chr3_3:78906282-78906301 None:intergenic 25.0%
! AAGTAATGCAGAATATACTT+TGG - chr3_3:78906294-78906313 Msa0475600:intron 25.0%
! AGTAATGCAGAATATACTTT+GGG - chr3_3:78906295-78906314 Msa0475600:intron 25.0%
!!! ATGTCTTTTTTTTGTTTTCC+AGG - chr3_3:78906415-78906434 Msa0475600:intron 25.0%
!!! TGTCTTTTTTTTGTTTTCCA+GGG - chr3_3:78906416-78906435 Msa0475600:intron 25.0%
! TACTTGATGAATGTAAATCA+TGG - chr3_3:78906521-78906540 Msa0475600:intron 25.0%
! CATAGCATAACTAAATAACA+TGG + chr3_3:78906704-78906723 None:intergenic 25.0%
! TTCAATATTTGACCTACTTT+AGG + chr3_3:78906794-78906813 None:intergenic 25.0%
!! TTTTCTTTGTTCTTGAATTG+GGG - chr3_3:78906849-78906868 Msa0475600:CDS 25.0%
!! AAAAGTACAGTAAAAGCTAA+AGG + chr3_3:78906918-78906937 None:intergenic 25.0%
!!! TTATCATTAGGTTTTTGGTA+TGG - chr3_3:78907090-78907109 Msa0475600:intron 25.0%
! GCTAGAAATTAATCAAAACT+AGG + chr3_3:78907146-78907165 None:intergenic 25.0%
! ACACAAAAAGAAATATTTGC+TGG + chr3_3:78907366-78907385 None:intergenic 25.0%
! AAAATATGCTAAGAAGTCAT+TGG - chr3_3:78907845-78907864 Msa0475600:intron 25.0%
! AATGGCTACAATCATATTAT+TGG - chr3_3:78907915-78907934 Msa0475600:intron 25.0%
! TATTGAATAATGTGTAACAG+TGG - chr3_3:78908265-78908284 Msa0475600:intron 25.0%
! TTTGTTTGAATAATGTGCAA+TGG - chr3_3:78908357-78908376 Msa0475600:intron 25.0%
! ATAGAAATACAAGTTTGTGA+GGG - chr3_3:78908459-78908478 Msa0475600:CDS 25.0%
!! TCTATAGGATTTGAGATTTA+AGG - chr3_3:78909031-78909050 Msa0475600:CDS 25.0%
!!! TCAGTTATGAGTTTTAAAAC+AGG + chr3_3:78909148-78909167 None:intergenic 25.0%
! AATATTATTTCCTTGCAGTT+GGG - chr3_3:78909197-78909216 Msa0475600:intron 25.0%
! AACTTCATTAACAAGAAAAG+TGG + chr3_3:78909382-78909401 None:intergenic 25.0%
!!! TAATACGCTGTTTCTTATAA+AGG - chr3_3:78909446-78909465 Msa0475600:intron 25.0%
! CAGACATAAAAAGCAATATT+TGG + chr3_3:78909547-78909566 None:intergenic 25.0%
!!! CAAATATTGCTTTTTATGTC+TGG - chr3_3:78909545-78909564 Msa0475600:intron 25.0%
! TTATCTCATTATGAATTGTG+CGG + chr3_3:78910239-78910258 None:intergenic 25.0%
! AACCTTAGAATCTAAACATT+AGG - chr3_3:78910273-78910292 Msa0475600:intron 25.0%
! TCAAAAACATCATAAGTTTG+GGG - chr3_3:78910330-78910349 Msa0475600:intron 25.0%
! TAAGTTACAAGATACACATT+TGG + chr3_3:78911082-78911101 None:intergenic 25.0%
! TATCAGATACGATATGTAAA+AGG + chr3_3:78911127-78911146 None:intergenic 25.0%
!! AATAAGTTGCTCATACATTT+TGG - chr3_3:78911196-78911215 Msa0475600:intron 25.0%
!! ATAAAACAGGCTAATTTTCT+TGG - chr3_3:78911310-78911329 Msa0475600:CDS 25.0%
!! AGGTAAAGTTCACTATTTTA+GGG + chr3_3:78911673-78911692 None:intergenic 25.0%
!! AAGGTAAAGTTCACTATTTT+AGG + chr3_3:78911674-78911693 None:intergenic 25.0%
!!! AATATTATTTCCGTTTTGGT+AGG - chr3_3:78911786-78911805 Msa0475600:intron 25.0%
! ATCATGTTCTTAACTAAGAT+CGG + chr3_3:78911919-78911938 None:intergenic 25.0%
!! ACATTAAAGCAAATCGTTTT+TGG + chr3_3:78912039-78912058 None:intergenic 25.0%
! CTTTAATGTATTCAATACCA+GGG - chr3_3:78912050-78912069 Msa0475600:intron 25.0%
! GTAAGTACCTATTGAAATTT+GGG - chr3_3:78912086-78912105 Msa0475600:intron 25.0%
! TAAGTACCTATTGAAATTTG+GGG - chr3_3:78912087-78912106 Msa0475600:intron 25.0%
!! AGATTAAAGCAAATCGTTTT+TGG + chr3_3:78912212-78912231 None:intergenic 25.0%
! CTTTAATCTATTCAATACCA+GGG - chr3_3:78912223-78912242 Msa0475600:intron 25.0%
! CTTGATAAGAGTTTATATAG+AGG + chr3_3:78912331-78912350 None:intergenic 25.0%
!!! ACGGTTTTATTGTATATTTC+CGG - chr3_3:78912510-78912529 Msa0475600:intron 25.0%
! CTTCTCACTTGTATATTTAT+AGG - chr3_3:78912656-78912675 Msa0475600:intron 25.0%
!! ACATTGTTTTCCTATGATTT+TGG - chr3_3:78912777-78912796 Msa0475600:intron 25.0%
!! CATTGTTTTCCTATGATTTT+GGG - chr3_3:78912778-78912797 Msa0475600:intron 25.0%
! CATTATTCTATGATGTATTG+GGG - chr3_3:78912933-78912952 Msa0475600:CDS 25.0%
! TCACTTCTCAATACTATATA+GGG + chr3_3:78913155-78913174 None:intergenic 25.0%
! ATCACTTCTCAATACTATAT+AGG + chr3_3:78913156-78913175 None:intergenic 25.0%
!! TGTCTTTCAAGTAAATTTGA+CGG - chr3_3:78913220-78913239 Msa0475600:intron 25.0%
! AGATAAGAAATTTATGCAGT+TGG + chr3_3:78913361-78913380 None:intergenic 25.0%
! AATAACTTCTTGGTTATACA+AGG + chr3_3:78913847-78913866 None:intergenic 25.0%
! TTATGGTATCAATAACTTCT+TGG + chr3_3:78913857-78913876 None:intergenic 25.0%
! ATACCATAAATATCCCATAA+TGG - chr3_3:78913868-78913887 Msa0475600:intron 25.0%
! TACCATAAATATCCCATAAT+GGG - chr3_3:78913869-78913888 Msa0475600:intron 25.0%
! ATCCTTACAAAAAAACACAT+AGG - chr3_3:78914045-78914064 Msa0475600:intron 25.0%
!!! ATCCTATGTGTTTTTTTGTA+AGG + chr3_3:78914050-78914069 None:intergenic 25.0%
!!! TAGGAAGTTCATTTGTTTTA+GGG - chr3_3:78914160-78914179 Msa0475600:intron 25.0%
! GAAACATGGAAAGTAAATTA+TGG - chr3_3:78914335-78914354 Msa0475600:intron 25.0%
! AGTAAATTATGGGTATTATC+TGG - chr3_3:78914346-78914365 Msa0475600:intron 25.0%
!! ATATACTGTGTATAGGTTTT+TGG - chr3_3:78914471-78914490 Msa0475600:five_prime_UTR 25.0%
!! AAACAACATCGATTCTTCAA+TGG - chr3_3:78902142-78902161 Msa0475600:three_prime_UTR 30.0%
ATTGAAAATCGGAATGAGAA+GGG + chr3_3:78902269-78902288 None:intergenic 30.0%
AATTGAAAATCGGAATGAGA+AGG + chr3_3:78902270-78902289 None:intergenic 30.0%
!!! ATGCTGTTTTTCTTTTGCTT+AGG - chr3_3:78902359-78902378 Msa0475600:intron 30.0%
TTCTCAAGAAAAAGAGTTAG+AGG - chr3_3:78902431-78902450 Msa0475600:intron 30.0%
TAAACACATTTGTGTCATGT+TGG - chr3_3:78902637-78902656 Msa0475600:intron 30.0%
GTATATTCCAATCTATGGAA+AGG + chr3_3:78902820-78902839 None:intergenic 30.0%
TTGGAATATACATTCTCTTC+CGG - chr3_3:78902829-78902848 Msa0475600:three_prime_UTR 30.0%
AGTACATATAATCGCAACAA+GGG + chr3_3:78902892-78902911 None:intergenic 30.0%
! TTTTGCTCATGATTTGAGTA+GGG - chr3_3:78902945-78902964 Msa0475600:intron 30.0%
AAAGGTTCATTATTGGTATC+CGG - chr3_3:78903005-78903024 Msa0475600:intron 30.0%
CCACGTACTATACAAAATTA+TGG + chr3_3:78903076-78903095 None:intergenic 30.0%
! CCATAATTTTGTATAGTACG+TGG - chr3_3:78903073-78903092 Msa0475600:intron 30.0%
GAATATATTTGCAGTATGTC+CGG + chr3_3:78903249-78903268 None:intergenic 30.0%
TAGCCGCTAAAAATATCAAA+TGG + chr3_3:78903343-78903362 None:intergenic 30.0%
!!! CATATGTTTTTTCTTTTGGC+AGG - chr3_3:78903386-78903405 Msa0475600:intron 30.0%
TCAATAACATTGCATCAATG+GGG - chr3_3:78903555-78903574 Msa0475600:CDS 30.0%
!!! TCTTTTTTGCAGGTTGAAAA+TGG - chr3_3:78903618-78903637 Msa0475600:intron 30.0%
! CCTTAAGACAACATGATTTT+CGG - chr3_3:78903679-78903698 Msa0475600:intron 30.0%
! CTTAAGACAACATGATTTTC+GGG - chr3_3:78903680-78903699 Msa0475600:intron 30.0%
GAAAATTCCCTTTATCTTCA+TGG - chr3_3:78903851-78903870 Msa0475600:CDS 30.0%
CTTCTAACCATGAAGATAAA+GGG + chr3_3:78903861-78903880 None:intergenic 30.0%
ACTTCTAACCATGAAGATAA+AGG + chr3_3:78903862-78903881 None:intergenic 30.0%
TTCGAATACTACAGATAATG+GGG + chr3_3:78903904-78903923 None:intergenic 30.0%
ATACCAATGAAAATACCAGT+TGG - chr3_3:78903929-78903948 Msa0475600:intron 30.0%
! AAACCAACTGGTATTTTCAT+TGG + chr3_3:78903935-78903954 None:intergenic 30.0%
TCCATAGAATCGAAAAAGTT+GGG + chr3_3:78904005-78904024 None:intergenic 30.0%
TTCCATAGAATCGAAAAAGT+TGG + chr3_3:78904006-78904025 None:intergenic 30.0%
!! AGAAGGTTCTAGGAAAATAT+TGG - chr3_3:78904095-78904114 Msa0475600:intron 30.0%
!! GAAGGTTCTAGGAAAATATT+GGG - chr3_3:78904096-78904115 Msa0475600:intron 30.0%
!! GACCTGGTTTAAGATTTTAT+TGG - chr3_3:78904118-78904137 Msa0475600:intron 30.0%
AGAGAATCATTTCTGTATAG+TGG + chr3_3:78904588-78904607 None:intergenic 30.0%
GAATGATGGTATAACAACAT+GGG + chr3_3:78904679-78904698 None:intergenic 30.0%
!! TTAATCCTCTGGAATTAGAT+AGG - chr3_3:78905016-78905035 Msa0475600:intron 30.0%
TTAAAGCATAACAGTGAGTT+TGG + chr3_3:78905136-78905155 None:intergenic 30.0%
! TTTAAAGCAAGGACTTGTTT+AGG + chr3_3:78905330-78905349 None:intergenic 30.0%
AAATAATTAACACAAGGAGG+TGG + chr3_3:78905556-78905575 None:intergenic 30.0%
! CACTTAAAGCTTAAGTATTG+GGG - chr3_3:78905660-78905679 Msa0475600:intron 30.0%
!!! AGATAACAAGTTCCCTTTTT+TGG - chr3_3:78905683-78905702 Msa0475600:intron 30.0%
AAAAGTAAATCTCCTTTACC+AGG - chr3_3:78905708-78905727 Msa0475600:intron 30.0%
AAAGTAAATCTCCTTTACCA+GGG - chr3_3:78905709-78905728 Msa0475600:intron 30.0%
!! GGCATAGTTTATGTTTTAGA+AGG + chr3_3:78905755-78905774 None:intergenic 30.0%
AACATAAACTATGCCATCAA+AGG - chr3_3:78905760-78905779 Msa0475600:intron 30.0%
!! CATATCCATTTTTCCTTTGA+TGG + chr3_3:78905776-78905795 None:intergenic 30.0%
CAAAGGAAAAATGGATATGT+TGG - chr3_3:78905777-78905796 Msa0475600:intron 30.0%
! TTTGTCATTTCTTTGGGTTT+CGG - chr3_3:78905823-78905842 Msa0475600:intron 30.0%
!!! TTATTTTTTTTTGTGTGGGG+TGG - chr3_3:78905867-78905886 Msa0475600:intron 30.0%
!!! TATTTTTTTTTGTGTGGGGT+GGG - chr3_3:78905868-78905887 Msa0475600:intron 30.0%
GAACAGAAATAGTTAGTACT+AGG - chr3_3:78906178-78906197 Msa0475600:intron 30.0%
CTGTATAATGATAGGGATTA+GGG + chr3_3:78906274-78906293 None:intergenic 30.0%
TCTGTATAATGATAGGGATT+AGG + chr3_3:78906275-78906294 None:intergenic 30.0%
CAACATTTCAAAGAGGATAA+TGG + chr3_3:78906347-78906366 None:intergenic 30.0%
GCAACAGTATTTGTTTGAAA+GGG + chr3_3:78906386-78906405 None:intergenic 30.0%
TGCAACAGTATTTGTTTGAA+AGG + chr3_3:78906387-78906406 None:intergenic 30.0%
ATGAACGATACAGATTGAAA+GGG + chr3_3:78907034-78907053 None:intergenic 30.0%
AATGAACGATACAGATTGAA+AGG + chr3_3:78907035-78907054 None:intergenic 30.0%
!! GACAGTTTTTGTTTGATTCA+CGG - chr3_3:78907062-78907081 Msa0475600:intron 30.0%
TTCACGGCTAATTTATCATT+AGG - chr3_3:78907078-78907097 Msa0475600:intron 30.0%
AGCCTTTATTATAAGGTTGT+AGG - chr3_3:78907215-78907234 Msa0475600:intron 30.0%
CACCTACAACCTTATAATAA+AGG + chr3_3:78907220-78907239 None:intergenic 30.0%
TATAAGGTTGTAGGTGTTTA+CGG - chr3_3:78907224-78907243 Msa0475600:intron 30.0%
GTAACTTACAGCTAAAGAAT+AGG + chr3_3:78907422-78907441 None:intergenic 30.0%
AAAACCATTTGTGAAGACAT+TGG + chr3_3:78907656-78907675 None:intergenic 30.0%
TAAAAATAACATCACTGCCA+AGG - chr3_3:78907681-78907700 Msa0475600:intron 30.0%
TATGCGGTGTATCATATATT+TGG - chr3_3:78907704-78907723 Msa0475600:intron 30.0%
!!! GCATGTAATGAAGTTTTGAA+TGG - chr3_3:78907897-78907916 Msa0475600:intron 30.0%
GTAGTAAAGTGGTTTATATG+CGG + chr3_3:78908172-78908191 None:intergenic 30.0%
!! AGTGGTTTTCAAGATTAACT+TGG - chr3_3:78908283-78908302 Msa0475600:intron 30.0%
GATAGAAATACAAGTTTGTG+AGG - chr3_3:78908458-78908477 Msa0475600:CDS 30.0%
! TATTGATGGATGAAGTCAAT+AGG - chr3_3:78908517-78908536 Msa0475600:intron 30.0%
! ATTGATGGATGAAGTCAATA+GGG - chr3_3:78908518-78908537 Msa0475600:intron 30.0%
!!! TTTGTATGTGCTGTTTTTTG+AGG - chr3_3:78908708-78908727 Msa0475600:CDS 30.0%
!!! TTGTATGTGCTGTTTTTTGA+GGG - chr3_3:78908709-78908728 Msa0475600:CDS 30.0%
AAGATCATATAGAAGTCTGA+AGG - chr3_3:78908914-78908933 Msa0475600:intron 30.0%
GAATATTATTTCCTTGCAGT+TGG - chr3_3:78909196-78909215 Msa0475600:intron 30.0%
ATGAGGTACAAACTTCTTTA+GGG + chr3_3:78909415-78909434 None:intergenic 30.0%
!! ATACCAAGTTTTAGCAGTTA+TGG + chr3_3:78909507-78909526 None:intergenic 30.0%
AATAGTGATACTTCACAAGA+TGG - chr3_3:78909712-78909731 Msa0475600:intron 30.0%
CTGATTCAAATATTCTTCAC+CGG - chr3_3:78909824-78909843 Msa0475600:intron 30.0%
ATCAGTGATTACAGTTGAAT+AGG - chr3_3:78910033-78910052 Msa0475600:intron 30.0%
GTCCTAATGTTTAGATTCTA+AGG + chr3_3:78910278-78910297 None:intergenic 30.0%
TAAACATTAGGACTTTCTAC+CGG - chr3_3:78910285-78910304 Msa0475600:intron 30.0%
GGAAAGATAAAAAAATACCC+CGG + chr3_3:78910307-78910326 None:intergenic 30.0%
! ACTAACACACTCACATTTTT+GGG - chr3_3:78910525-78910544 Msa0475600:intron 30.0%
ATCCTAACTCCTAATAATCA+AGG - chr3_3:78910587-78910606 Msa0475600:intron 30.0%
TTCCTTGATTATTAGGAGTT+AGG + chr3_3:78910592-78910611 None:intergenic 30.0%
!! ACGCTTTAAGTTCTAGATAA+GGG + chr3_3:78910739-78910758 None:intergenic 30.0%
!! AACGCTTTAAGTTCTAGATA+AGG + chr3_3:78910740-78910759 None:intergenic 30.0%
! TAGAACTTAAAGCGTTATCT+TGG - chr3_3:78910744-78910763 Msa0475600:intron 30.0%
! GATATTCTAGTTGATGTTTG+CGG - chr3_3:78910892-78910911 Msa0475600:intron 30.0%
!! GTGTTCTTAGTTTGGATTTT+TGG - chr3_3:78911025-78911044 Msa0475600:CDS 30.0%
ACAGAATGGTCGATAATATA+TGG + chr3_3:78911167-78911186 None:intergenic 30.0%
ATATGAAGCAGAGGTTTATT+GGG - chr3_3:78911266-78911285 Msa0475600:CDS 30.0%
! GCTAATTTTCTTGGTCAAAA+AGG - chr3_3:78911319-78911338 Msa0475600:CDS 30.0%
AATTGAAGTTATCAATGTCG+TGG - chr3_3:78911418-78911437 Msa0475600:intron 30.0%
ATCATAAGTTCCTACCAAAA+CGG + chr3_3:78911799-78911818 None:intergenic 30.0%
TCATGTTCTTAACTAAGATC+GGG + chr3_3:78911918-78911937 None:intergenic 30.0%
GCTTTAATGTATTCAATACC+AGG - chr3_3:78912049-78912068 Msa0475600:intron 30.0%
GGTAAGTACCTATTGAAATT+TGG - chr3_3:78912085-78912104 Msa0475600:intron 30.0%
AATAAACAGTAACTGAGAGT+TGG + chr3_3:78911960-78911979 None:intergenic 30.0%
! CATAACATACATTTTCTCCA+TGG + chr3_3:78912188-78912207 None:intergenic 30.0%
GCTTTAATCTATTCAATACC+AGG - chr3_3:78912222-78912241 Msa0475600:intron 30.0%
GTAAGTACCTGTTGAAAATT+GGG - chr3_3:78912259-78912278 Msa0475600:intron 30.0%
TAAGTACCTGTTGAAAATTG+GGG - chr3_3:78912260-78912279 Msa0475600:intron 30.0%
GATAAGAGTTTATATAGAGG+AGG + chr3_3:78912328-78912347 None:intergenic 30.0%
!! GAAATGAAAAGCACTGATTT+AGG - chr3_3:78912466-78912485 Msa0475600:intron 30.0%
CTTCAAAATCCCAAAATCAT+AGG + chr3_3:78912790-78912809 None:intergenic 30.0%
!! TCATCCATTTGATTTTGTTG+TGG - chr3_3:78912873-78912892 Msa0475600:CDS 30.0%
AACAAAAGTTATCCCGTAAT+AGG - chr3_3:78913100-78913119 Msa0475600:intron 30.0%
ACAAAAGTTATCCCGTAATA+GGG - chr3_3:78913101-78913120 Msa0475600:intron 30.0%
!! CATTATTTTTCACATACACG+TGG - chr3_3:78913190-78913209 Msa0475600:CDS 30.0%
!!! TCTGTCATTTTGTTAATACC+AGG - chr3_3:78913270-78913289 Msa0475600:intron 30.0%
AGCTCAATTAATATAGAAGC+TGG + chr3_3:78913310-78913329 None:intergenic 30.0%
AACTTTATCAGATTACGTCA+AGG + chr3_3:78913435-78913454 None:intergenic 30.0%
TTGACGTAATCTGATAAAGT+TGG - chr3_3:78913434-78913453 Msa0475600:intron 30.0%
!!! TTGTAGTTTTGACAGTATCT+AGG - chr3_3:78913463-78913482 Msa0475600:intron 30.0%
TATCTAGGTGATACATGTAA+GGG - chr3_3:78913478-78913497 Msa0475600:intron 30.0%
!! ATAAATATCCCATAATGGGT+CGG - chr3_3:78913873-78913892 Msa0475600:intron 30.0%
ATACAGGTTCAATAAGATGT+GGG + chr3_3:78913992-78914011 None:intergenic 30.0%
AATACAGGTTCAATAAGATG+TGG + chr3_3:78913993-78914012 None:intergenic 30.0%
! GATTTTCTGTTAAGTAGCAA+AGG + chr3_3:78914028-78914047 None:intergenic 30.0%
ACAAATGAACTTCCTAGAAA+AGG + chr3_3:78914156-78914175 None:intergenic 30.0%
!! CTAGGAAGTTCATTTGTTTT+AGG - chr3_3:78914159-78914178 Msa0475600:intron 30.0%
CTATTGTTGGAGATAAGTTA+AGG + chr3_3:78914401-78914420 None:intergenic 30.0%
TTTGCTGATATACTGTGTAT+AGG - chr3_3:78914464-78914483 Msa0475600:five_prime_UTR 30.0%
TACTATAGTCCCTTATTGTT+TGG - chr3_3:78914604-78914623 Msa0475600:five_prime_UTR 30.0%
GAGAAAGAACATGATCATCA+TGG + chr3_3:78902293-78902312 None:intergenic 35.0%
AAAACAGCATTCTATTGGTC+AGG + chr3_3:78902349-78902368 None:intergenic 35.0%
TCTGTCCTATAAACATGTGT+TGG - chr3_3:78902706-78902725 Msa0475600:intron 35.0%
TGACACCAACACATGTTTAT+AGG + chr3_3:78902714-78902733 None:intergenic 35.0%
GAGTACATATAATCGCAACA+AGG + chr3_3:78902893-78902912 None:intergenic 35.0%
GCAAAAGGATACTCATCAAA+AGG + chr3_3:78902931-78902950 None:intergenic 35.0%
CTACTCAAATCATGAGCAAA+AGG + chr3_3:78902946-78902965 None:intergenic 35.0%
! CTTTTGCTCATGATTTGAGT+AGG - chr3_3:78902944-78902963 Msa0475600:intron 35.0%
GCTATTGCTTGGAATTCAAA+AGG - chr3_3:78902987-78903006 Msa0475600:intron 35.0%
!! AAATTAGCTGCTTGCTGTAT+GGG - chr3_3:78903121-78903140 Msa0475600:intron 35.0%
!!! GTTTTTTCTTTTGGCAGGTT+CGG - chr3_3:78903391-78903410 Msa0475600:intron 35.0%
!! TAAAGTGCTGATGGAGTAAT+GGG + chr3_3:78903462-78903481 None:intergenic 35.0%
GAAATTGGCTGTAAGTTATG+TGG - chr3_3:78903506-78903525 Msa0475600:CDS 35.0%
GTTATTGAAACTGTCAACTC+AGG + chr3_3:78903543-78903562 None:intergenic 35.0%
CCGAAAATCATGTTGTCTTA+AGG + chr3_3:78903682-78903701 None:intergenic 35.0%
GTATTCTACTGAACATTGTC+TGG - chr3_3:78903797-78903816 Msa0475600:intron 35.0%
!! ACTACAGATAATGGGGAAAT+CGG + chr3_3:78903897-78903916 None:intergenic 35.0%
!!! TCCCAACTTTTTCGATTCTA+TGG - chr3_3:78904001-78904020 Msa0475600:intron 35.0%
AGTTTAGCATAGAAGGTTCT+AGG - chr3_3:78904085-78904104 Msa0475600:intron 35.0%
GCAACTTCCCATTTAATATG+CGG + chr3_3:78904204-78904223 None:intergenic 35.0%
!!! AATGGGAAGTTGCTTTTGTA+TGG - chr3_3:78904211-78904230 Msa0475600:intron 35.0%
CAAATTAGCCGAACTAATGA+TGG - chr3_3:78904372-78904391 Msa0475600:intron 35.0%
TCTTCAGTCCATCATTAGTT+CGG + chr3_3:78904383-78904402 None:intergenic 35.0%
GGAAAAGAAATGGATAGTAG+TGG + chr3_3:78904540-78904559 None:intergenic 35.0%
! TTCTGTATAGTGGAGAAGTT+GGG + chr3_3:78904578-78904597 None:intergenic 35.0%
! TTTCTGTATAGTGGAGAAGT+TGG + chr3_3:78904579-78904598 None:intergenic 35.0%
ACAGAAATGACAGTTAGCAT+TGG + chr3_3:78904628-78904647 None:intergenic 35.0%
GGAATGATGGTATAACAACA+TGG + chr3_3:78904680-78904699 None:intergenic 35.0%
GGGTCTATCAAACTTTATTC+TGG - chr3_3:78904821-78904840 Msa0475600:intron 35.0%
TGATATTATGGCTGCATCTT+AGG - chr3_3:78904964-78904983 Msa0475600:intron 35.0%
! ATCGCCTTTTATTAATCCTC+TGG - chr3_3:78905005-78905024 Msa0475600:intron 35.0%
CCATCTTCTTTACCATCTTT+CGG + chr3_3:78905087-78905106 None:intergenic 35.0%
CCATCTTCTTTACCATCTTT+CGG + chr3_3:78905087-78905106 None:intergenic 35.0%
AAGTAAATCTCCTTTACCAG+GGG - chr3_3:78905710-78905729 Msa0475600:intron 35.0%
CTATGCCATCAAAGGAAAAA+TGG - chr3_3:78905768-78905787 Msa0475600:intron 35.0%
!! ATGCGCTTTTGTCATTTCTT+TGG - chr3_3:78905816-78905835 Msa0475600:intron 35.0%
!! TGCGCTTTTGTCATTTCTTT+GGG - chr3_3:78905817-78905836 Msa0475600:intron 35.0%
AGAAGTTAAAATTCCAGCTC+CGG + chr3_3:78906016-78906035 None:intergenic 35.0%
ACATGAGTTAAGTGCAAACT+TGG + chr3_3:78906446-78906465 None:intergenic 35.0%
CATGTTACATTTAGTCCTGA+TGG - chr3_3:78906461-78906480 Msa0475600:intron 35.0%
! GCAGCTGTTCAAATTGTTTT+TGG - chr3_3:78906616-78906635 Msa0475600:intron 35.0%
GTGTGTAGTATTCCTAAAGT+AGG - chr3_3:78906779-78906798 Msa0475600:CDS 35.0%
AGAAGTTGCAAAAAGATGCA+CGG + chr3_3:78906941-78906960 None:intergenic 35.0%
!! CAGATTGAAAGGGCTATTTT+AGG + chr3_3:78907024-78907043 None:intergenic 35.0%
!!! ATTAGGTTTTTGGTATGGTG+TGG - chr3_3:78907095-78907114 Msa0475600:intron 35.0%
ACAGTTCTCACAAACATAAC+AGG + chr3_3:78907444-78907463 None:intergenic 35.0%
GTAACTTACAGCTAAAGAGT+GGG + chr3_3:78907476-78907495 None:intergenic 35.0%
ACAGTTCTCACAAACATAAC+AGG + chr3_3:78907444-78907463 None:intergenic 35.0%
TTATTCTTGCAATATGCAGC+TGG - chr3_3:78907538-78907557 Msa0475600:intron 35.0%
GTGAAGACATTGGAAACAAA+AGG + chr3_3:78907646-78907665 None:intergenic 35.0%
GTTTCCAATGTCTTCACAAA+TGG - chr3_3:78907649-78907668 Msa0475600:intron 35.0%
CATGCCTCAATTCCATAATA+GGG + chr3_3:78907882-78907901 None:intergenic 35.0%
ACATGCCTCAATTCCATAAT+AGG + chr3_3:78907883-78907902 None:intergenic 35.0%
TATCAAATTTCCTAGCAGCA+TGG + chr3_3:78908146-78908165 None:intergenic 35.0%
GTTTGAATAATGTGCAATGG+TGG - chr3_3:78908360-78908379 Msa0475600:intron 35.0%
!! GGTGGTTTTCAAGATTATCT+TGG - chr3_3:78908378-78908397 Msa0475600:intron 35.0%
! TTGATGGATGAAGTCAATAG+GGG - chr3_3:78908519-78908538 Msa0475600:intron 35.0%
! GTGCTTTTGTGTGTAAACTT+GGG - chr3_3:78908619-78908638 Msa0475600:intron 35.0%
TGTGTAAACTTGGGTTTCAT+AGG - chr3_3:78908628-78908647 Msa0475600:intron 35.0%
!!! TGTATGTGCTGTTTTTTGAG+GGG - chr3_3:78908710-78908729 Msa0475600:CDS 35.0%
ATATGATTTCTGTACCTGCT+AGG - chr3_3:78908806-78908825 Msa0475600:intron 35.0%
AGATGCACTCATTGCAAAAA+TGG - chr3_3:78908855-78908874 Msa0475600:intron 35.0%
GATGCACTCATTGCAAAAAT+GGG - chr3_3:78908856-78908875 Msa0475600:intron 35.0%
ATGCACTCATTGCAAAAATG+GGG - chr3_3:78908857-78908876 Msa0475600:intron 35.0%
TTGCAAAAATGGGGTAGATT+AGG - chr3_3:78908866-78908885 Msa0475600:intron 35.0%
CAGACTTCTATATGATCTTC+TGG + chr3_3:78908913-78908932 None:intergenic 35.0%
TCTTTCAGCAACTTCAGATT+TGG + chr3_3:78909276-78909295 None:intergenic 35.0%
! GTGAAGAAGGATATGGTTTT+AGG - chr3_3:78909305-78909324 Msa0475600:intron 35.0%
!!! GAAGGATATGGTTTTAGGTA+TGG - chr3_3:78909310-78909329 Msa0475600:intron 35.0%
TGAGGTACAAACTTCTTTAG+GGG + chr3_3:78909414-78909433 None:intergenic 35.0%
CATGAGGTACAAACTTCTTT+AGG + chr3_3:78909416-78909435 None:intergenic 35.0%
GTATTAAAGTGAGCTTCATG+AGG + chr3_3:78909432-78909451 None:intergenic 35.0%
ATGCCATAACTGCTAAAACT+TGG - chr3_3:78909501-78909520 Msa0475600:intron 35.0%
! AGCAAGACAAATAATGGAAG+AGG - chr3_3:78909643-78909662 Msa0475600:intron 35.0%
! AAGACAAATAATGGAAGAGG+TGG - chr3_3:78909646-78909665 Msa0475600:intron 35.0%
CATTAAGTGACATTCTCTAC+CGG - chr3_3:78909680-78909699 Msa0475600:intron 35.0%
TTCTGATTATGACGAGGAAA+TGG - chr3_3:78909756-78909775 Msa0475600:intron 35.0%
GAATTCTACGATTCATACTC+CGG + chr3_3:78909846-78909865 None:intergenic 35.0%
AATCGTAGAATTCATCGAAG+AGG - chr3_3:78909853-78909872 Msa0475600:intron 35.0%
! TGTGATGATGATGATGATGA+GGG + chr3_3:78909922-78909941 None:intergenic 35.0%
TCATCATCATCATCACAGAA+TGG - chr3_3:78909925-78909944 Msa0475600:intron 35.0%
AGAAGATAGCAAAACAAACC+TGG + chr3_3:78909963-78909982 None:intergenic 35.0%
TGCTATCTTCTACTGAAAGT+TGG - chr3_3:78909972-78909991 Msa0475600:intron 35.0%
TTACAGTTGAATAGGCATAG+AGG - chr3_3:78910041-78910060 Msa0475600:intron 35.0%
AAACATTAGGACTTTCTACC+GGG - chr3_3:78910286-78910305 Msa0475600:intron 35.0%
! CACTAACACACTCACATTTT+TGG - chr3_3:78910524-78910543 Msa0475600:intron 35.0%
! AATTGGAGTGTCCAACAATA+GGG + chr3_3:78910689-78910708 None:intergenic 35.0%
ATCTTCACACCAACTTGAAT+TGG + chr3_3:78910706-78910725 None:intergenic 35.0%
! CAAAAGAGTGCGTTGAAAAA+TGG + chr3_3:78910873-78910892 None:intergenic 35.0%
! ATCCTGTTAGGTATTGTGTA+CGG + chr3_3:78910975-78910994 None:intergenic 35.0%
TTACTGTATGTGATCCTGTT+AGG + chr3_3:78910987-78911006 None:intergenic 35.0%
CAATGCATGTGTTCTTAGTT+TGG - chr3_3:78911017-78911036 Msa0475600:intron 35.0%
GGTACATTCTTGAAAACTGT+TGG + chr3_3:78911106-78911125 None:intergenic 35.0%
TTCATATCAATAGCTGCTTC+GGG + chr3_3:78911253-78911272 None:intergenic 35.0%
CTTCATATCAATAGCTGCTT+CGG + chr3_3:78911254-78911273 None:intergenic 35.0%
GATATGAAGCAGAGGTTTAT+TGG - chr3_3:78911265-78911284 Msa0475600:CDS 35.0%
! TCGTGAGTGAAATTGTGTTT+TGG - chr3_3:78911496-78911515 Msa0475600:intron 35.0%
!! AGGGTTTAGTCAAGTTTTAG+CGG + chr3_3:78911654-78911673 None:intergenic 35.0%
ACAGGAGAATAGTATGACTA+AGG + chr3_3:78911693-78911712 None:intergenic 35.0%
TTGGTAGGAACTTATGATCT+TGG - chr3_3:78911801-78911820 Msa0475600:intron 35.0%
! ATCCTACCTGATTTAAGATC+GGG + chr3_3:78911862-78911881 None:intergenic 35.0%
! GATCCTACCTGATTTAAGAT+CGG + chr3_3:78911863-78911882 None:intergenic 35.0%
ATACCAGGGTTACATTTACA+TGG - chr3_3:78912064-78912083 Msa0475600:intron 35.0%
TTACCATGTAAATGTAACCC+TGG + chr3_3:78912070-78912089 None:intergenic 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + chr3_3:78912113-78912132 None:intergenic 35.0%
!!! AACTGAGAGTTGGTTTTGTA+AGG + chr3_3:78912123-78912142 None:intergenic 35.0%
ATATGGTATTCTTGCGTTGT+TGG - chr3_3:78912156-78912175 Msa0475600:intron 35.0%
ATACCAGGGTTACATTTACA+TGG - chr3_3:78912064-78912083 Msa0475600:intron 35.0%
TTACCATGTAAATGTAACCC+TGG + chr3_3:78912070-78912089 None:intergenic 35.0%
GGTAAGTACCTGTTGAAAAT+TGG - chr3_3:78912258-78912277 Msa0475600:intron 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + chr3_3:78912113-78912132 None:intergenic 35.0%
GTAAAAGAGACAGCTTAAGA+GGG + chr3_3:78912432-78912451 None:intergenic 35.0%
AGTAAAAGAGACAGCTTAAG+AGG + chr3_3:78912433-78912452 None:intergenic 35.0%
TAATTAAAACAGTCGCATGC+CGG + chr3_3:78912532-78912551 None:intergenic 35.0%
CAAGTGTGTGTGTTAAGATT+TGG - chr3_3:78912607-78912626 Msa0475600:intron 35.0%
ATGATGGCAGATGGTTTATT+TGG - chr3_3:78912702-78912721 Msa0475600:intron 35.0%
TGATGGCAGATGGTTTATTT+GGG - chr3_3:78912703-78912722 Msa0475600:intron 35.0%
TTTATTTGGGAAAAGCGAAC+TGG - chr3_3:78912716-78912735 Msa0475600:intron 35.0%
AGCTTCAGATAACAGTACAA+GGG + chr3_3:78912817-78912836 None:intergenic 35.0%
TAGCTTCAGATAACAGTACA+AGG + chr3_3:78912818-78912837 None:intergenic 35.0%
TGTACGCAATTTACAACTGT+AGG + chr3_3:78912850-78912869 None:intergenic 35.0%
GTTGCCACAACAAAATCAAA+TGG + chr3_3:78912880-78912899 None:intergenic 35.0%
!! ATTTTGTTGTGGCAACAAGT+GGG - chr3_3:78912884-78912903 Msa0475600:CDS 35.0%
! TGGGATTGATAACACGATAA+AGG - chr3_3:78912903-78912922 Msa0475600:CDS 35.0%
!!! GTGATGGATTTTCCTAGATA+TGG - chr3_3:78912989-78913008 Msa0475600:intron 35.0%
! ACAGCATTGAATCCCTATTA+CGG + chr3_3:78913116-78913135 None:intergenic 35.0%
ATTTGACGGTGAAAATAAGC+AGG - chr3_3:78913234-78913253 Msa0475600:intron 35.0%
GTATCTAGGTGATACATGTA+AGG - chr3_3:78913477-78913496 Msa0475600:intron 35.0%
!!! TCTGTTTTCGGAAGCATTAA+AGG + chr3_3:78913616-78913635 None:intergenic 35.0%
! CTAAATGGCTGATCTGTTTT+CGG + chr3_3:78913628-78913647 None:intergenic 35.0%
TAACCACAGTATGTCCTAAA+TGG + chr3_3:78913643-78913662 None:intergenic 35.0%
!!! TAGCTGATTCTTTTTTCTGC+AGG - chr3_3:78913661-78913680 Msa0475600:intron 35.0%
!! AATGGTTCTAAGAGCTCAAA+GGG + chr3_3:78913687-78913706 None:intergenic 35.0%
!! AAATGGTTCTAAGAGCTCAA+AGG + chr3_3:78913688-78913707 None:intergenic 35.0%
GGAAACTCATGCATTCTAAA+TGG + chr3_3:78913705-78913724 None:intergenic 35.0%
! ATCGGTGAATCTTTAGGTTT+GGG + chr3_3:78913763-78913782 None:intergenic 35.0%
! AATCGGTGAATCTTTAGGTT+TGG + chr3_3:78913764-78913783 None:intergenic 35.0%
GTGAAAATCGGTGAATCTTT+AGG + chr3_3:78913769-78913788 None:intergenic 35.0%
AAAGAAATGAACTTACCAGC+AGG + chr3_3:78913791-78913810 None:intergenic 35.0%
GACCCATTATGGGATATTTA+TGG + chr3_3:78913874-78913893 None:intergenic 35.0%
AGGCAGAGTATATGAAATAC+AGG + chr3_3:78914008-78914027 None:intergenic 35.0%
TCATTTGTGAATAAGCAAGC+AGG + chr3_3:78914080-78914099 None:intergenic 35.0%
! CGAAACAAGATACCTTTTCT+AGG - chr3_3:78914141-78914160 Msa0475600:intron 35.0%
TGGATTGAGATGATTCAGAT+GGG - chr3_3:78914275-78914294 Msa0475600:intron 35.0%
! TTTAAAATGTCTCCCATGCT+TGG + chr3_3:78914304-78914323 None:intergenic 35.0%
ATATCAGCAAACATGGCAAT+CGG + chr3_3:78914455-78914474 None:intergenic 35.0%
ACACAGTATATCAGCAAACA+TGG + chr3_3:78914462-78914481 None:intergenic 35.0%
!! TACTGTGTATAGGTTTTTGG+TGG - chr3_3:78914474-78914493 Msa0475600:five_prime_UTR 35.0%
TCCAAAAATAACCGCCTGAT+TGG - chr3_3:78902033-78902052 Msa0475600:three_prime_UTR 40.0%
!! ACCAATCAGGCGGTTATTTT+TGG + chr3_3:78902037-78902056 None:intergenic 40.0%
! TGATCTTTTCACCAATCAGG+CGG + chr3_3:78902047-78902066 None:intergenic 40.0%
TGTATGTTTCCGTCGAGAAA+AGG + chr3_3:78902176-78902195 None:intergenic 40.0%
AGAAAGTCTGCGAATCAAAG+AGG + chr3_3:78902415-78902434 None:intergenic 40.0%
GGCATGACATGATGTTAGAA+AGG + chr3_3:78902459-78902478 None:intergenic 40.0%
CATTTGTGTCATGTTGGTGT+TGG - chr3_3:78902643-78902662 Msa0475600:intron 40.0%
ATCAAATGTGTGTCTGGTGT+TGG + chr3_3:78902743-78902762 None:intergenic 40.0%
ACTCAGATCAAATGTGTGTC+TGG + chr3_3:78902749-78902768 None:intergenic 40.0%
CACACATTTGATCTGAGTGT+TGG - chr3_3:78902751-78902770 Msa0475600:intron 40.0%
TGATTTGAGTAGGGACATCT+TGG - chr3_3:78902954-78902973 Msa0475600:intron 40.0%
GTTGTGTCAATGCTATTGCT+TGG - chr3_3:78902976-78902995 Msa0475600:intron 40.0%
!! GAAATTAGCTGCTTGCTGTA+TGG - chr3_3:78903120-78903139 Msa0475600:intron 40.0%
! ATCAATGTTTGGAGCTATGC+TGG - chr3_3:78903197-78903216 Msa0475600:intron 40.0%
CTAGTGCATTCAATTGACAC+CGG - chr3_3:78903227-78903246 Msa0475600:intron 40.0%
ACAAGCTCATCAGATGTTTC+TGG + chr3_3:78903287-78903306 None:intergenic 40.0%
!! GTAAAGTGCTGATGGAGTAA+TGG + chr3_3:78903463-78903482 None:intergenic 40.0%
ATAACATTGCATCAATGGGG+AGG - chr3_3:78903558-78903577 Msa0475600:CDS 40.0%
TGAAAATGGAAACCCCAATG+TGG - chr3_3:78903632-78903651 Msa0475600:intron 40.0%
TCTTAAGGTTCCATCTTCAC+TGG + chr3_3:78903667-78903686 None:intergenic 40.0%
!! AGACAACATGATTTTCGGGA+AGG - chr3_3:78903684-78903703 Msa0475600:intron 40.0%
CTAGAACATTGTGACACTCT+TGG + chr3_3:78903740-78903759 None:intergenic 40.0%
GCATGTGAAAAGACGAAGTT+GGG - chr3_3:78903819-78903838 Msa0475600:intron 40.0%
!!! GATAATGGGGAAATCGGTTT+TGG + chr3_3:78903891-78903910 None:intergenic 40.0%
!! CCAGTTGGTTTGCTTATGAT+CGG - chr3_3:78903944-78903963 Msa0475600:intron 40.0%
! TATAACAAGAGCATGTGCAG+AGG - chr3_3:78903976-78903995 Msa0475600:intron 40.0%
! ATACAAGCTTGCCTCAGTTT+TGG - chr3_3:78904026-78904045 Msa0475600:intron 40.0%
TCTAGGAAAATATTGGGACC+TGG - chr3_3:78904102-78904121 Msa0475600:intron 40.0%
!!! GGAAGTTGCTTTTGTATGGA+GGG - chr3_3:78904215-78904234 Msa0475600:intron 40.0%
!! TGAGGGCTGTTTTCTTCATA+AGG + chr3_3:78904501-78904520 None:intergenic 40.0%
AGAAATGGATAGTAGTGGTC+AGG + chr3_3:78904535-78904554 None:intergenic 40.0%
! TCTGTATAGTGGAGAAGTTG+GGG + chr3_3:78904577-78904596 None:intergenic 40.0%
! AGTTAGCATTGGAGAGTGAT+GGG + chr3_3:78904617-78904636 None:intergenic 40.0%
GATGGTATAACAACATGGGA+GGG + chr3_3:78904675-78904694 None:intergenic 40.0%
TGATGGTATAACAACATGGG+AGG + chr3_3:78904676-78904695 None:intergenic 40.0%
GTATATGCAAGGAGGAATGA+TGG + chr3_3:78904693-78904712 None:intergenic 40.0%
TCCTCCTTGCATATACTTGT+AGG - chr3_3:78904697-78904716 Msa0475600:intron 40.0%
AGGGAATAAAAAGGGAGCAA+GGG + chr3_3:78904778-78904797 None:intergenic 40.0%
! TGATTTTCCTTGAGATGCCT+TGG + chr3_3:78904929-78904948 None:intergenic 40.0%
GAGATCCTATCTAATTCCAG+AGG + chr3_3:78905024-78905043 None:intergenic 40.0%
TCTTCTTTACCATCTTTCGG+TGG + chr3_3:78905084-78905103 None:intergenic 40.0%
CCGAAAGATGGTAAAGAAGA+TGG - chr3_3:78905084-78905103 Msa0475600:intron 40.0%
TCTTCTTTACCATCTTTCGG+TGG + chr3_3:78905084-78905103 None:intergenic 40.0%
CCGAAAGATGGTAAAGAAGA+TGG - chr3_3:78905084-78905103 Msa0475600:intron 40.0%
! TTTTCTGTAGCTGAACTCCT+TGG - chr3_3:78905219-78905238 Msa0475600:intron 40.0%
AATGGAGCTAAAAGATCCCT+TGG - chr3_3:78905297-78905316 Msa0475600:CDS 40.0%
TTGTTTAGGAGGATCACCAA+GGG + chr3_3:78905316-78905335 None:intergenic 40.0%
! AAAGCAAGGACTTGTTTAGG+AGG + chr3_3:78905327-78905346 None:intergenic 40.0%
TCTATCATACAGACGTGCAA+AGG + chr3_3:78905491-78905510 None:intergenic 40.0%
TTGCACGTCTGTATGATAGA+AGG - chr3_3:78905491-78905510 Msa0475600:intron 40.0%
TAATTAACACAAGGAGGTGG+AGG + chr3_3:78905553-78905572 None:intergenic 40.0%
AAGGACTAACACGATCAGAA+AGG + chr3_3:78905591-78905610 None:intergenic 40.0%
TCAACTTACTAACAAAGGCC+CGG - chr3_3:78905994-78906013 Msa0475600:intron 40.0%
GAAGTTAAAATTCCAGCTCC+GGG + chr3_3:78906015-78906034 None:intergenic 40.0%
TTAACTTCTGTACGCACTCT+TGG - chr3_3:78906027-78906046 Msa0475600:intron 40.0%
TACGCACTCTTGGATGATAA+AGG - chr3_3:78906037-78906056 Msa0475600:intron 40.0%
ACGCACTCTTGGATGATAAA+GGG - chr3_3:78906038-78906057 Msa0475600:intron 40.0%
TAGGGATTAGGGAATGATGA+GGG + chr3_3:78906263-78906282 None:intergenic 40.0%
ATAGGGATTAGGGAATGATG+AGG + chr3_3:78906264-78906283 None:intergenic 40.0%
!! CAAAGAGGATAATGGATGAG+AGG + chr3_3:78906339-78906358 None:intergenic 40.0%
!! TCCTCTTTGAAATGTTGTGC+AGG - chr3_3:78906350-78906369 Msa0475600:intron 40.0%
! ATTTAGTCCTGATGGATCTG+AGG - chr3_3:78906469-78906488 Msa0475600:intron 40.0%
TCTTGAATTGGGGTTTGAAG+AGG - chr3_3:78906859-78906878 Msa0475600:CDS 40.0%
!! GCATATGCAAGAGTATCAAG+TGG + chr3_3:78906885-78906904 None:intergenic 40.0%
GTGGTTTCAGATGTTCTCAA+AGG - chr3_3:78907114-78907133 Msa0475600:intron 40.0%
TCAGATGTTCTCAAAGGTCT+AGG - chr3_3:78907120-78907139 Msa0475600:intron 40.0%
GGTAACTTACAGCTAAAGAG+TGG + chr3_3:78907477-78907496 None:intergenic 40.0%
ACTTACTCTCCAAGCGTTAA+TGG - chr3_3:78907607-78907626 Msa0475600:intron 40.0%
CTTACTCTCCAAGCGTTAAT+GGG - chr3_3:78907608-78907627 Msa0475600:intron 40.0%
TTACTCTCCAAGCGTTAATG+GGG - chr3_3:78907609-78907628 Msa0475600:intron 40.0%
AATTCTACCCCATTAACGCT+TGG + chr3_3:78907619-78907638 None:intergenic 40.0%
ATATGATACACCGCATACCT+TGG + chr3_3:78907701-78907720 None:intergenic 40.0%
TTGTACAGCTTGACAAGTGT+AGG - chr3_3:78907814-78907833 Msa0475600:intron 40.0%
TATTGGACCTGCACTAAAAC+AGG - chr3_3:78907932-78907951 Msa0475600:intron 40.0%
!!! AAGCATTCCTGTTTTAGTGC+AGG + chr3_3:78907942-78907961 None:intergenic 40.0%
GTGGAAAAACGATGCTCATA+TGG - chr3_3:78908107-78908126 Msa0475600:intron 40.0%
GCTTCTGACATGTAGTAAAG+TGG + chr3_3:78908183-78908202 None:intergenic 40.0%
! TATCTTGGTGCACTTAAGAC+TGG - chr3_3:78908393-78908412 Msa0475600:intron 40.0%
GGTAAGTGTGCTCATATTGA+TGG - chr3_3:78908503-78908522 Msa0475600:intron 40.0%
! CGTGCTTTTGTGTGTAAACT+TGG - chr3_3:78908618-78908637 Msa0475600:intron 40.0%
!!! TTTTTTGAGGGGTTTGCAGA+TGG - chr3_3:78908721-78908740 Msa0475600:CDS 40.0%
GTGACAGCAAATGCTTCTAT+AGG - chr3_3:78909016-78909035 Msa0475600:CDS 40.0%
GAAAGCCTTCTGCATACAAA+CGG + chr3_3:78909114-78909133 None:intergenic 40.0%
! TTTGTGTTTTCCCAACTGCA+AGG + chr3_3:78909210-78909229 None:intergenic 40.0%
GGGAAAACACAAAGAAGCTT+TGG - chr3_3:78909217-78909236 Msa0475600:intron 40.0%
AGCAACTTCAGATTTGGATG+GGG + chr3_3:78909270-78909289 None:intergenic 40.0%
CAGCAACTTCAGATTTGGAT+GGG + chr3_3:78909271-78909290 None:intergenic 40.0%
TCAGCAACTTCAGATTTGGA+TGG + chr3_3:78909272-78909291 None:intergenic 40.0%
! ATCTGAAGTTGCTGAAAGAG+TGG - chr3_3:78909277-78909296 Msa0475600:intron 40.0%
AAGAGTGGAGAATGTGAAGA+AGG - chr3_3:78909292-78909311 Msa0475600:intron 40.0%
GGAGAATGTGAAGAAGGATA+TGG - chr3_3:78909298-78909317 Msa0475600:intron 40.0%
!!! GGTTTTAGGTATGGACAAGA+TGG - chr3_3:78909319-78909338 Msa0475600:intron 40.0%
! TATCACTATTAGCCTCTGTC+CGG + chr3_3:78909702-78909721 None:intergenic 40.0%
GGATGATTCTGATTATGACG+AGG - chr3_3:78909750-78909769 Msa0475600:intron 40.0%
TTATGACGAGGAAATGGAGT+TGG - chr3_3:78909762-78909781 Msa0475600:intron 40.0%
AGAGAAAATGCTGAAGCAAG+TGG - chr3_3:78909883-78909902 Msa0475600:intron 40.0%
! CTGTGATGATGATGATGATG+AGG + chr3_3:78909923-78909942 None:intergenic 40.0%
TAGCGTGCTATAGACAAAGT+AGG + chr3_3:78910093-78910112 None:intergenic 40.0%
ACTTTGTCTATAGCACGCTA+CGG - chr3_3:78910093-78910112 Msa0475600:CDS 40.0%
! ATCTGTCACATCCGCTATTT+TGG + chr3_3:78910185-78910204 None:intergenic 40.0%
AACATTAGGACTTTCTACCG+GGG - chr3_3:78910287-78910306 Msa0475600:intron 40.0%
CATGAATGAGACAGTATGAG+AGG + chr3_3:78910360-78910379 None:intergenic 40.0%
CTCATTCATGCCGTCATATT+TGG - chr3_3:78910370-78910389 Msa0475600:intron 40.0%
GAGTGTGTTAGTGAATAACG+AGG + chr3_3:78910517-78910536 None:intergenic 40.0%
! ATTGGAGTGTCCAACAATAG+GGG + chr3_3:78910688-78910707 None:intergenic 40.0%
! GAATTGGAGTGTCCAACAAT+AGG + chr3_3:78910690-78910709 None:intergenic 40.0%
TTGGACACTCCAATTCAAGT+TGG - chr3_3:78910694-78910713 Msa0475600:intron 40.0%
! AAAGCGTTATCTTGGTCTCT+TGG - chr3_3:78910752-78910771 Msa0475600:intron 40.0%
AAGCGTTATCTTGGTCTCTT+GGG - chr3_3:78910753-78910772 Msa0475600:intron 40.0%
! GATTTTACTTGGAACGACAG+CGG - chr3_3:78910785-78910804 Msa0475600:intron 40.0%
! GTGCGTTGAAAAATGGACTT+GGG + chr3_3:78910866-78910885 None:intergenic 40.0%
! AGTGCGTTGAAAAATGGACT+TGG + chr3_3:78910867-78910886 None:intergenic 40.0%
! TAGGTATTGTGTACGGACTT+CGG + chr3_3:78910968-78910987 None:intergenic 40.0%
CAGCTATTGATATGAAGCAG+AGG - chr3_3:78911257-78911276 Msa0475600:CDS 40.0%
! TTTATTGGGCACTGCAATGT+GGG - chr3_3:78911280-78911299 Msa0475600:CDS 40.0%
TGTGGGGACTGATATAAAAC+AGG - chr3_3:78911297-78911316 Msa0475600:CDS 40.0%
ATCATGAGTGAAATCGCGTT+TGG - chr3_3:78911523-78911542 Msa0475600:intron 40.0%
TCATGAGTGAAATCGCGTTT+GGG - chr3_3:78911524-78911543 Msa0475600:intron 40.0%
!!! TTTAGCGGTTTTGTTCAGCT+GGG + chr3_3:78911639-78911658 None:intergenic 40.0%
!!! TTTTAGCGGTTTTGTTCAGC+TGG + chr3_3:78911640-78911659 None:intergenic 40.0%
AGAAACAGAGCAATCACAAC+AGG + chr3_3:78911711-78911730 None:intergenic 40.0%
TTGGAGAGAAGAGAGATGAA+GGG + chr3_3:78911757-78911776 None:intergenic 40.0%
ATTGGAGAGAAGAGAGATGA+AGG + chr3_3:78911758-78911777 None:intergenic 40.0%
TTCTTAACTAAGATCGGGAG+GGG + chr3_3:78911913-78911932 None:intergenic 40.0%
GTTCTTAACTAAGATCGGGA+GGG + chr3_3:78911914-78911933 None:intergenic 40.0%
TGTTCTTAACTAAGATCGGG+AGG + chr3_3:78911915-78911934 None:intergenic 40.0%
GTTAGGCCCCAAATTTCAAT+AGG + chr3_3:78912096-78912115 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr3_3:78912296-78912315 None:intergenic 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr3_3:78912293-78912312 Msa0475600:intron 40.0%
! AGAGTCTTATCTATCCGATG+TGG - chr3_3:78912349-78912368 Msa0475600:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG - chr3_3:78912350-78912369 Msa0475600:intron 40.0%
GGCAACAGTTTGGTACTATT+GGG + chr3_3:78912388-78912407 None:intergenic 40.0%
ATATGTGCATAGACACAGGA+CGG - chr3_3:78912491-78912510 Msa0475600:intron 40.0%
CAGAACGAGGAGATTCATTA+TGG + chr3_3:78912560-78912579 None:intergenic 40.0%
GAGATGAACAAATCAGAACG+AGG + chr3_3:78912573-78912592 None:intergenic 40.0%
ATAGGTGAATATGTTGCCAG+CGG - chr3_3:78912674-78912693 Msa0475600:intron 40.0%
AGACTCATGAAATTGCTGAG+TGG - chr3_3:78912740-78912759 Msa0475600:intron 40.0%
TTCAGATAACAGTACAAGGG+GGG + chr3_3:78912814-78912833 None:intergenic 40.0%
CTTCAGATAACAGTACAAGG+GGG + chr3_3:78912815-78912834 None:intergenic 40.0%
GCTTCAGATAACAGTACAAG+GGG + chr3_3:78912816-78912835 None:intergenic 40.0%
!! GATTTTGTTGTGGCAACAAG+TGG - chr3_3:78912883-78912902 Msa0475600:CDS 40.0%
!! TTTCAATCTCTGAAGCTGTC+TGG - chr3_3:78912967-78912986 Msa0475600:CDS 40.0%
! CAGCATTGAATCCCTATTAC+GGG + chr3_3:78913115-78913134 None:intergenic 40.0%
TATTGAGAAGTGATGCAGCT+AGG - chr3_3:78913162-78913181 Msa0475600:CDS 40.0%
!!! CTGGTCATTTTTATGACTCC+TGG + chr3_3:78913291-78913310 None:intergenic 40.0%
GAGCTACTGCTGTTAATGTT+AGG - chr3_3:78913325-78913344 Msa0475600:CDS 40.0%
TAGGTGATACATGTAAGGGT+TGG - chr3_3:78913482-78913501 Msa0475600:intron 40.0%
CGAAAACAGATCAGCCATTT+AGG - chr3_3:78913626-78913645 Msa0475600:CDS 40.0%
AGAATGCATGAGTTTCCTGA+AGG - chr3_3:78913708-78913727 Msa0475600:intron 40.0%
TAGGTTTGGGCACATTCAAA+AGG + chr3_3:78913750-78913769 None:intergenic 40.0%
ACTTACCAGCAGGTGAAAAT+CGG + chr3_3:78913781-78913800 None:intergenic 40.0%
CTGGATTGAGATGATTCAGA+TGG - chr3_3:78914274-78914293 Msa0475600:intron 40.0%
GGATTGAGATGATTCAGATG+GGG - chr3_3:78914276-78914295 Msa0475600:intron 40.0%
! GCGTGATCTTTTCACCAATC+AGG + chr3_3:78902050-78902069 None:intergenic 45.0%
! GATTCCACTCCTTTTCTCGA+CGG - chr3_3:78902164-78902183 Msa0475600:three_prime_UTR 45.0%
CAGCATTCTATTGGTCAGGA+AGG + chr3_3:78902345-78902364 None:intergenic 45.0%
CAAGCTATGAAGCACAGCTA+TGG - chr3_3:78902555-78902574 Msa0475600:intron 45.0%
GGCATCACCTTTCCATAGAT+TGG - chr3_3:78902810-78902829 Msa0475600:intron 45.0%
TATCCGGATCAGATGATACG+CGG - chr3_3:78903021-78903040 Msa0475600:intron 45.0%
TGCATCAATGGGGAGGTAAA+AGG - chr3_3:78903565-78903584 Msa0475600:CDS 45.0%
ATGGAAACCCCAATGTGGTA+TGG - chr3_3:78903637-78903656 Msa0475600:intron 45.0%
ACATTGTGACACTCTTGGTG+TGG + chr3_3:78903735-78903754 None:intergenic 45.0%
GGCATGTGAAAAGACGAAGT+TGG - chr3_3:78903818-78903837 Msa0475600:intron 45.0%
CCGATCATAAGCAAACCAAC+TGG + chr3_3:78903947-78903966 None:intergenic 45.0%
GTGACAAGCAACCAAAACTG+AGG + chr3_3:78904040-78904059 None:intergenic 45.0%
!!! GGGAAGTTGCTTTTGTATGG+AGG - chr3_3:78904214-78904233 Msa0475600:intron 45.0%
!!! AGTTGCTTTTGTATGGAGGG+AGG - chr3_3:78904218-78904237 Msa0475600:intron 45.0%
!!! GTTGCTTTTGTATGGAGGGA+GGG - chr3_3:78904219-78904238 Msa0475600:intron 45.0%
!! TTGCTTTTGTATGGAGGGAG+GGG - chr3_3:78904220-78904239 Msa0475600:intron 45.0%
TGGGAGGGAAGGAAAAGAAA+TGG + chr3_3:78904550-78904569 None:intergenic 45.0%
! CAGTTAGCATTGGAGAGTGA+TGG + chr3_3:78904618-78904637 None:intergenic 45.0%
GCCTACAAGTATATGCAAGG+AGG + chr3_3:78904701-78904720 None:intergenic 45.0%
TGGGCCTACAAGTATATGCA+AGG + chr3_3:78904704-78904723 None:intergenic 45.0%
GAGGGAATAAAAAGGGAGCA+AGG + chr3_3:78904779-78904798 None:intergenic 45.0%
ATGGGAAACCTCTATGACCA+AGG - chr3_3:78904909-78904928 Msa0475600:intron 45.0%
TTGAGATGCCTTGGTCATAG+AGG + chr3_3:78904920-78904939 None:intergenic 45.0%
! TCTATGACCAAGGCATCTCA+AGG - chr3_3:78904919-78904938 Msa0475600:intron 45.0%
! TCGACTTTTCCACCGAAAGA+TGG - chr3_3:78905072-78905091 Msa0475600:intron 45.0%
! TCGACTTTTCCACCGAAAGA+TGG - chr3_3:78905072-78905091 Msa0475600:intron 45.0%
GCCAATGTCAGCTTGACTTA+CGG - chr3_3:78905274-78905293 Msa0475600:intron 45.0%
TCCGTAAGTCAAGCTGACAT+TGG + chr3_3:78905278-78905297 None:intergenic 45.0%
TGTCAGCTTGACTTACGGAA+TGG - chr3_3:78905279-78905298 Msa0475600:intron 45.0%
CTTGTTTAGGAGGATCACCA+AGG + chr3_3:78905317-78905336 None:intergenic 45.0%
AGACCTCATTTGCTCCTTGT+TGG - chr3_3:78905372-78905391 Msa0475600:intron 45.0%
CTCATTTGCTCCTTGTTGGT+GGG - chr3_3:78905376-78905395 Msa0475600:intron 45.0%
ATACTTACCTCCCACCAACA+AGG + chr3_3:78905389-78905408 None:intergenic 45.0%
! CTTTTTCCACAGGAGCTTAG+AGG + chr3_3:78905526-78905545 None:intergenic 45.0%
!!! TGGAGGCATTCTTTTTCCAC+AGG + chr3_3:78905536-78905555 None:intergenic 45.0%
! ACACGATCAGAAAGGTGCAT+TGG + chr3_3:78905583-78905602 None:intergenic 45.0%
AATCTCCTTTACCAGGGGAA+AGG - chr3_3:78905715-78905734 Msa0475600:intron 45.0%
!!! TTTTTTTTGTGTGGGGTGGG+TGG - chr3_3:78905871-78905890 Msa0475600:intron 45.0%
!!! TTTTTTTGTGTGGGGTGGGT+GGG - chr3_3:78905872-78905891 Msa0475600:intron 45.0%
!!! GATGAGGGGTGTTTTCTTCA+AGG + chr3_3:78906248-78906267 None:intergenic 45.0%
AGGGATTAGGGAATGATGAG+GGG + chr3_3:78906262-78906281 None:intergenic 45.0%
!! GGATAATGGATGAGAGGTTG+TGG + chr3_3:78906333-78906352 None:intergenic 45.0%
GCCTGCACAACATTTCAAAG+AGG + chr3_3:78906354-78906373 None:intergenic 45.0%
!! TAAAAGGAGAGAGTGCTGTG+AGG - chr3_3:78906757-78906776 Msa0475600:CDS 45.0%
!! AGGGCTATTTTAGGAAGCGA+GGG + chr3_3:78907015-78907034 None:intergenic 45.0%
!! AAGGGCTATTTTAGGAAGCG+AGG + chr3_3:78907016-78907035 None:intergenic 45.0%
ATATGCAGCTGGTGTGAATG+AGG - chr3_3:78907549-78907568 Msa0475600:intron 45.0%
AACATCACTGCCAAGGTATG+CGG - chr3_3:78907688-78907707 Msa0475600:intron 45.0%
TGCTAAGAAGTCATTGGACG+AGG - chr3_3:78907851-78907870 Msa0475600:intron 45.0%
GCTAAGAAGTCATTGGACGA+GGG - chr3_3:78907852-78907871 Msa0475600:intron 45.0%
CTAAGAAGTCATTGGACGAG+GGG - chr3_3:78907853-78907872 Msa0475600:intron 45.0%
TAAGAAGTCATTGGACGAGG+GGG - chr3_3:78907854-78907873 Msa0475600:intron 45.0%
GGCACCCTATTATGGAATTG+AGG - chr3_3:78907875-78907894 Msa0475600:intron 45.0%
TCGTGCTGCACTATTGCTTA+AGG - chr3_3:78907968-78907987 Msa0475600:intron 45.0%
GAAATTACCTCGACATCCAG+AGG - chr3_3:78908082-78908101 Msa0475600:intron 45.0%
!! CATCGTTTTTCCACTTCCTC+TGG + chr3_3:78908101-78908120 None:intergenic 45.0%
!! CATGTCAGAAGCATTGTCTC+AGG - chr3_3:78908191-78908210 Msa0475600:intron 45.0%
AGCATTGTCTCAGGTACTCT+TGG - chr3_3:78908200-78908219 Msa0475600:intron 45.0%
ATGGATGAAGTCAATAGGGG+AGG - chr3_3:78908522-78908541 Msa0475600:intron 45.0%
! TCATAGGTGCTGTAGTAGTG+AGG - chr3_3:78908644-78908663 Msa0475600:CDS 45.0%
TTCTGTACCTGCTAGGATTG+AGG - chr3_3:78908813-78908832 Msa0475600:intron 45.0%
AAGCCCAGCTTGATAGATTG+AGG - chr3_3:78908993-78909012 Msa0475600:CDS 45.0%
AGCCCAGCTTGATAGATTGA+GGG - chr3_3:78908994-78909013 Msa0475600:CDS 45.0%
CACCCTCAATCTATCAAGCT+GGG + chr3_3:78908999-78909018 None:intergenic 45.0%
TCACCCTCAATCTATCAAGC+TGG + chr3_3:78909000-78909019 None:intergenic 45.0%
TCACACCGTTTGTATGCAGA+AGG - chr3_3:78909106-78909125 Msa0475600:intron 45.0%
AAGATGGTCAGAGATCTGAC+AGG - chr3_3:78909728-78909747 Msa0475600:intron 45.0%
AGATGGTCAGAGATCTGACA+GGG - chr3_3:78909729-78909748 Msa0475600:intron 45.0%
GACTTCGAAACATCAGTGTC+TGG - chr3_3:78909784-78909803 Msa0475600:intron 45.0%
AAATGCTGAAGCAAGTGGCT+CGG - chr3_3:78909888-78909907 Msa0475600:intron 45.0%
GAATGGTAGAGCTTCATACC+AGG - chr3_3:78909942-78909961 Msa0475600:intron 45.0%
TAGGCATAGAGGAGAGAGAA+TGG - chr3_3:78910052-78910071 Msa0475600:intron 45.0%
AGGCATAGAGGAGAGAGAAT+GGG - chr3_3:78910053-78910072 Msa0475600:intron 45.0%
ATGCAAAAGCAGAGCTGTTC+AGG - chr3_3:78910142-78910161 Msa0475600:CDS 45.0%
TGCAAAAGCAGAGCTGTTCA+GGG - chr3_3:78910143-78910162 Msa0475600:CDS 45.0%
AGTGAGAGGGCCAAATATGA+CGG + chr3_3:78910383-78910402 None:intergenic 45.0%
GCTGTGATTGACTAGTGAGA+GGG + chr3_3:78910396-78910415 None:intergenic 45.0%
AGCTGTGATTGACTAGTGAG+AGG + chr3_3:78910397-78910416 None:intergenic 45.0%
!! ACACACTCACATTTTTGGGC+TGG - chr3_3:78910529-78910548 Msa0475600:intron 45.0%
ACAATAGGGGTTACTCGGTT+AGG + chr3_3:78910675-78910694 None:intergenic 45.0%
AACCGAGTAACCCCTATTGT+TGG - chr3_3:78910675-78910694 Msa0475600:intron 45.0%
GTCCAACAATAGGGGTTACT+CGG + chr3_3:78910680-78910699 None:intergenic 45.0%
AGCGTTATCTTGGTCTCTTG+GGG - chr3_3:78910754-78910773 Msa0475600:intron 45.0%
GTTCCAAGTAAAATCCCCCA+AGG + chr3_3:78910780-78910799 None:intergenic 45.0%
! ACAGCGGTTTCTTGAGTTGT+AGG - chr3_3:78910801-78910820 Msa0475600:intron 45.0%
! GTCGTGATCAGCAAGCTTTT+TGG + chr3_3:78910828-78910847 None:intergenic 45.0%
GTTTGCGGCTGATTGTTTGT+TGG - chr3_3:78910907-78910926 Msa0475600:intron 45.0%
GTCCGTACACAATACCTAAC+AGG - chr3_3:78910970-78910989 Msa0475600:intron 45.0%
! GTTTATTGGGCACTGCAATG+TGG - chr3_3:78911279-78911298 Msa0475600:CDS 45.0%
! TTATTGGGCACTGCAATGTG+GGG - chr3_3:78911281-78911300 Msa0475600:CDS 45.0%
! CGATTTTGCGATTCTACGAC+TGG - chr3_3:78911460-78911479 Msa0475600:intron 45.0%
TCACTCACGATCCATATTCC+AGG + chr3_3:78911486-78911505 None:intergenic 45.0%
CAGTACAGTCGCAAATTGTG+TGG + chr3_3:78911559-78911578 None:intergenic 45.0%
TTTGCGACTGTACTGCAGTT+TGG - chr3_3:78911564-78911583 Msa0475600:intron 45.0%
TTGCGACTGTACTGCAGTTT+GGG - chr3_3:78911565-78911584 Msa0475600:intron 45.0%
GACAGAGCAATCACAACAGT+CGG + chr3_3:78911735-78911754 None:intergenic 45.0%
CACTCTCCCGATCTTAAATC+AGG - chr3_3:78911853-78911872 Msa0475600:intron 45.0%
CTCCCGATCTTAAATCAGGT+AGG - chr3_3:78911857-78911876 Msa0475600:intron 45.0%
GGGTAGCAAAATCGTAACTG+GGG + chr3_3:78911892-78911911 None:intergenic 45.0%
GGGGTAGCAAAATCGTAACT+GGG + chr3_3:78911893-78911912 None:intergenic 45.0%
TCTTAACTAAGATCGGGAGG+GGG + chr3_3:78911912-78911931 None:intergenic 45.0%
! GTTAGGCCCCAATTTTCAAC+AGG + chr3_3:78912269-78912288 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG - chr3_3:78912298-78912317 Msa0475600:intron 45.0%
TATCTATCCGATGTGGGACT+TGG - chr3_3:78912356-78912375 Msa0475600:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG - chr3_3:78912357-78912376 Msa0475600:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG + chr3_3:78912366-78912385 None:intergenic 45.0%
GGGCAACAGTTTGGTACTAT+TGG + chr3_3:78912389-78912408 None:intergenic 45.0%
CTACTTCAAGGGCAACAGTT+TGG + chr3_3:78912398-78912417 None:intergenic 45.0%
GGTGATATGTGCATAGACAC+AGG - chr3_3:78912487-78912506 Msa0475600:intron 45.0%
AGCACTTGGAGTCCATATCT+AGG + chr3_3:78913004-78913023 None:intergenic 45.0%
! ACCAGAAACTGGTGATGTGT+TGG - chr3_3:78913059-78913078 Msa0475600:intron 45.0%
! CCAGAAACTGGTGATGTGTT+GGG - chr3_3:78913060-78913079 Msa0475600:intron 45.0%
! CAGCCATTTAGGACATACTG+TGG - chr3_3:78913637-78913656 Msa0475600:CDS 45.0%
!!! ATTCACCGATTTTCACCTGC+TGG - chr3_3:78913773-78913792 Msa0475600:intron 45.0%
!! TATCCCATAATGGGTCGGTT+TGG - chr3_3:78913878-78913897 Msa0475600:intron 45.0%
!! AAATAATATTCTATATATAT+TGG + chr3_3:78911776-78911795 None:intergenic 5.0%
!! TAATTATTGAATTATTATAA+AGG - chr3_3:78914197-78914216 Msa0475600:CDS 5.0%
AGAGAGAGAGAGAGAGAGGA+AGG + chr3_3:78902109-78902128 None:intergenic 50.0%
CTTCAGAGAGAGAGAGAGAG+AGG + chr3_3:78902113-78902132 None:intergenic 50.0%
GTTTCCGTCGAGAAAAGGAG+TGG + chr3_3:78902171-78902190 None:intergenic 50.0%
AACATACAGGGCGAGAGTGA+AGG + chr3_3:78902220-78902239 None:intergenic 50.0%
ATCCGGATCAGATGATACGC+GGG - chr3_3:78903022-78903041 Msa0475600:intron 50.0%
TACCCGCGTATCATCTGATC+CGG + chr3_3:78903027-78903046 None:intergenic 50.0%
TCTGATGAGCTTGTAGCCTC+TGG - chr3_3:78903293-78903312 Msa0475600:intron 50.0%
CTGATGAGCTTGTAGCCTCT+GGG - chr3_3:78903294-78903313 Msa0475600:intron 50.0%
TGATGAGCTTGTAGCCTCTG+GGG - chr3_3:78903295-78903314 Msa0475600:intron 50.0%
! GGCAGGTTCGGTTATTCAAC+AGG - chr3_3:78903403-78903422 Msa0475600:intron 50.0%
TTCAACAGGTCTCGCGTAAG+TGG - chr3_3:78903417-78903436 Msa0475600:intron 50.0%
TCAACAGGTCTCGCGTAAGT+GGG - chr3_3:78903418-78903437 Msa0475600:intron 50.0%
!! TGGCACTGGTAAAGTGCTGA+TGG + chr3_3:78903471-78903490 None:intergenic 50.0%
ATTTCTTGACCCTGCGAGTG+TGG + chr3_3:78903491-78903510 None:intergenic 50.0%
CACTCGCAGGGTCAAGAAAT+TGG - chr3_3:78903491-78903510 Msa0475600:CDS 50.0%
TGGCACTCCATACCACATTG+GGG + chr3_3:78903647-78903666 None:intergenic 50.0%
CTGGCACTCCATACCACATT+GGG + chr3_3:78903648-78903667 None:intergenic 50.0%
ACTGGCACTCCATACCACAT+TGG + chr3_3:78903649-78903668 None:intergenic 50.0%
! GTATGGAGTGCCAGTGAAGA+TGG - chr3_3:78903654-78903673 Msa0475600:intron 50.0%
GAAGAAAACAGCCCTCACCA+AGG - chr3_3:78904504-78904523 Msa0475600:intron 50.0%
GGAGGGAGAGAATCGATTAC+AGG + chr3_3:78904658-78904677 None:intergenic 50.0%
GCAGAATGGGCAGGAAAAGT+GGG + chr3_3:78904723-78904742 None:intergenic 50.0%
AGCAGAATGGGCAGGAAAAG+TGG + chr3_3:78904724-78904743 None:intergenic 50.0%
CCACCAACAAGGAGCAAATG+AGG + chr3_3:78905378-78905397 None:intergenic 50.0%
CCTCATTTGCTCCTTGTTGG+TGG - chr3_3:78905375-78905394 Msa0475600:intron 50.0%
! ATTTGCTCCTTGTTGGTGGG+AGG - chr3_3:78905379-78905398 Msa0475600:intron 50.0%
TTTCCACAGGAGCTTAGAGG+TGG + chr3_3:78905523-78905542 None:intergenic 50.0%
!!! TTTTTTGTGTGGGGTGGGTG+GGG - chr3_3:78905873-78905892 Msa0475600:intron 50.0%
AGTGCAAACTTGGATGTCCC+TGG + chr3_3:78906436-78906455 None:intergenic 50.0%
AGGAGAACCTCAGATCCATC+AGG + chr3_3:78906479-78906498 None:intergenic 50.0%
GAGGTTCTCCTGAGCTATAG+CGG - chr3_3:78906488-78906507 Msa0475600:intron 50.0%
!! GGGCTATTTTAGGAAGCGAG+GGG + chr3_3:78907014-78907033 None:intergenic 50.0%
TAAGAGACTGCCATGCTGCT+AGG - chr3_3:78908133-78908152 Msa0475600:intron 50.0%
! TAGGTGCTGTAGTAGTGAGG+TGG - chr3_3:78908647-78908666 Msa0475600:CDS 50.0%
! AGGTGCTGTAGTAGTGAGGT+GGG - chr3_3:78908648-78908667 Msa0475600:CDS 50.0%
TGTCACACCTCAATCCTAGC+AGG + chr3_3:78908823-78908842 None:intergenic 50.0%
TGACATTCTCTACCGGACAG+AGG - chr3_3:78909687-78909706 Msa0475600:intron 50.0%
! AACATCAGTGTCTGGTGACG+AGG - chr3_3:78909792-78909811 Msa0475600:intron 50.0%
GGCATAGAGGAGAGAGAATG+GGG - chr3_3:78910054-78910073 Msa0475600:intron 50.0%
TTGTCTATAGCACGCTACGG+AGG - chr3_3:78910096-78910115 Msa0475600:CDS 50.0%
!! CTCTGCTTTTGCATGTCCTG+CGG + chr3_3:78910136-78910155 None:intergenic 50.0%
GCCACTAGCAGCCAAAATAG+CGG - chr3_3:78910171-78910190 Msa0475600:intron 50.0%
!!! TCCGCTATTTTGGCTGCTAG+TGG + chr3_3:78910175-78910194 None:intergenic 50.0%
GTGTTATCAATCCCGAGCAG+CGG + chr3_3:78910565-78910584 None:intergenic 50.0%
GGGGTTACTCGGTTAGGATA+AGG + chr3_3:78910669-78910688 None:intergenic 50.0%
!! TCTACGACTGGCCTGGAATA+TGG - chr3_3:78911472-78911491 Msa0475600:intron 50.0%
!! TGTACTGCAGTTTGGGTTGC+TGG - chr3_3:78911572-78911591 Msa0475600:intron 50.0%
TGGAATAGCGCCTCACATTC+TGG - chr3_3:78911592-78911611 Msa0475600:intron 50.0%
GGAATAGCGCCTCACATTCT+GGG - chr3_3:78911593-78911612 Msa0475600:intron 50.0%
GGGGGTAGCAAAATCGTAAC+TGG + chr3_3:78911894-78911913 None:intergenic 50.0%
TGCGTTGTTGGAGTTTGCCA+TGG - chr3_3:78912168-78912187 Msa0475600:intron 50.0%
GCAATCCTCACCTTACAAGC+TGG + chr3_3:78912306-78912325 None:intergenic 50.0%
TTGCTGAGTGGCGATGAATC+TGG - chr3_3:78912752-78912771 Msa0475600:intron 50.0%
!! TCTCTGAAGCTGTCTGGTGA+TGG - chr3_3:78912973-78912992 Msa0475600:CDS 50.0%
!! GAAGATGCAACAGGAGCACT+TGG + chr3_3:78913018-78913037 None:intergenic 50.0%
CCAGCTACAGAAGATGCAAC+AGG + chr3_3:78913027-78913046 None:intergenic 50.0%
CCTGTTGCATCTTCTGTAGC+TGG - chr3_3:78913024-78913043 Msa0475600:intron 50.0%
GTTGCATCTTCTGTAGCTGG+TGG - chr3_3:78913027-78913046 Msa0475600:intron 50.0%
CCCAACACATCACCAGTTTC+TGG + chr3_3:78913063-78913082 None:intergenic 50.0%
! TGGTGATGTGTTGGGTGCTA+TGG - chr3_3:78913068-78913087 Msa0475600:intron 50.0%
CCACCAAACCGACCCATTAT+GGG + chr3_3:78913884-78913903 None:intergenic 50.0%
CTGCAGTGGTACAGAAGGAA+AGG + chr3_3:78914227-78914246 None:intergenic 50.0%
CTTTCCTTCTGTACCACTGC+AGG - chr3_3:78914225-78914244 Msa0475600:intron 50.0%
! ACCACTGCAGGTGCTATGTT+CGG - chr3_3:78914237-78914256 Msa0475600:intron 50.0%
TTCGGCGGTACTTGTGAATC+TGG - chr3_3:78914255-78914274 Msa0475600:intron 50.0%
!! AGAAGTGTCTGGGGTTGGGT+TGG - chr3_3:78901998-78902017 Msa0475600:three_prime_UTR 55.0%
!! AGGGCGAGAGTGAAGGTATC+TGG + chr3_3:78902213-78902232 None:intergenic 55.0%
AGGTCTCGCGTAAGTGGGAA+TGG - chr3_3:78903423-78903442 Msa0475600:intron 55.0%
TTTACCAGTGCCACACTCGC+AGG - chr3_3:78903478-78903497 Msa0475600:intron 55.0%
TTACCAGTGCCACACTCGCA+GGG - chr3_3:78903479-78903498 Msa0475600:intron 55.0%
AGATCCTGCAGGAGGACAAG+AGG + chr3_3:78903712-78903731 None:intergenic 55.0%
! TCTTGGTGTGGAGATCCTGC+AGG + chr3_3:78903723-78903742 None:intergenic 55.0%
! GTCAGGTGTTGCCTTGGTGA+GGG + chr3_3:78904518-78904537 None:intergenic 55.0%
! GTAGTGGTCAGGTGTTGCCT+TGG + chr3_3:78904524-78904543 None:intergenic 55.0%
AGAAGTTGGGGTCGTTGGGA+GGG + chr3_3:78904565-78904584 None:intergenic 55.0%
GTGGAGAAGTTGGGGTCGTT+GGG + chr3_3:78904569-78904588 None:intergenic 55.0%
AGTGGAGAAGTTGGGGTCGT+TGG + chr3_3:78904570-78904589 None:intergenic 55.0%
TTCCTGCCCATTCTGCTCCT+CGG - chr3_3:78904727-78904746 Msa0475600:intron 55.0%
CCCAAACCGAGGAGCAGAAT+GGG + chr3_3:78904736-78904755 None:intergenic 55.0%
CCCATTCTGCTCCTCGGTTT+GGG - chr3_3:78904733-78904752 Msa0475600:intron 55.0%
TTCCATACCAGCCCAAACCG+AGG + chr3_3:78904747-78904766 None:intergenic 55.0%
CTACCACCTCTAAGCTCCTG+TGG - chr3_3:78905517-78905536 Msa0475600:intron 55.0%
GCACTCCTTTCCCCTGGTAA+AGG + chr3_3:78905723-78905742 None:intergenic 55.0%
TGTACAGCACTCCTTTCCCC+TGG + chr3_3:78905729-78905748 None:intergenic 55.0%
TACTAACAAAGGCCCGGAGC+TGG - chr3_3:78906000-78906019 Msa0475600:intron 55.0%
CATGCTCTCCGCTATAGCTC+AGG + chr3_3:78906499-78906518 None:intergenic 55.0%
ACCTCGACATCCAGAGGAAG+TGG - chr3_3:78908088-78908107 Msa0475600:intron 55.0%
TCCACTTCCTCTGGATGTCG+AGG + chr3_3:78908092-78908111 None:intergenic 55.0%
TGCATGTCCTGCGGAGGTAA+AGG + chr3_3:78910127-78910146 None:intergenic 55.0%
! TGCTTTTGCATGTCCTGCGG+AGG + chr3_3:78910133-78910152 None:intergenic 55.0%
AGCAGAGCTGTTCAGGGTAG+CGG - chr3_3:78910149-78910168 Msa0475600:CDS 55.0%
ATCTTGGTCTCTTGGGGCCT+TGG - chr3_3:78910760-78910779 Msa0475600:intron 55.0%
TCTTGGTCTCTTGGGGCCTT+GGG - chr3_3:78910761-78910780 Msa0475600:intron 55.0%
! GGGCCTTGGGGGATTTTACT+TGG - chr3_3:78910774-78910793 Msa0475600:intron 55.0%
! TTGCGATTCTACGACTGGCC+TGG - chr3_3:78911465-78911484 Msa0475600:intron 55.0%
! TCTGTAGCTGGTGGTTCTGC+AGG - chr3_3:78913036-78913055 Msa0475600:intron 55.0%
GGTTCTGCAGGACCAGAAAC+TGG - chr3_3:78913048-78913067 Msa0475600:intron 55.0%
CGCAAGCGTAGTGATCCTTC+AGG + chr3_3:78913726-78913745 None:intergenic 55.0%
!! CCCATAATGGGTCGGTTTGG+TGG - chr3_3:78913881-78913900 Msa0475600:intron 55.0%
GCCACCAAACCGACCCATTA+TGG + chr3_3:78913885-78913904 None:intergenic 55.0%
AGCACCTGCAGTGGTACAGA+AGG + chr3_3:78914232-78914251 None:intergenic 55.0%
! ACTGCAGGTGCTATGTTCGG+CGG - chr3_3:78914240-78914259 Msa0475600:intron 55.0%
TTCAGATGGGGAGCCAAGCA+TGG - chr3_3:78914288-78914307 Msa0475600:intron 55.0%
TCAGATGGGGAGCCAAGCAT+GGG - chr3_3:78914289-78914308 Msa0475600:intron 55.0%
!! AGTGTCTGGGGTTGGGTTGG+AGG - chr3_3:78902001-78902020 Msa0475600:three_prime_UTR 60.0%
!! GTGTCTGGGGTTGGGTTGGA+GGG - chr3_3:78902002-78902021 Msa0475600:three_prime_UTR 60.0%
!! TGTCTGGGGTTGGGTTGGAG+GGG - chr3_3:78902003-78902022 Msa0475600:three_prime_UTR 60.0%
TTCAGCATCTCCAGCCCCAG+AGG + chr3_3:78903312-78903331 None:intergenic 60.0%
TGGTGTGGAGATCCTGCAGG+AGG + chr3_3:78903720-78903739 None:intergenic 60.0%
! GGTCAGGTGTTGCCTTGGTG+AGG + chr3_3:78904519-78904538 None:intergenic 60.0%
GAGAAGTTGGGGTCGTTGGG+AGG + chr3_3:78904566-78904585 None:intergenic 60.0%
AACCGAGGAGCAGAATGGGC+AGG + chr3_3:78904732-78904751 None:intergenic 60.0%
GCCCATTCTGCTCCTCGGTT+TGG - chr3_3:78904732-78904751 Msa0475600:intron 60.0%
GCCCAAACCGAGGAGCAGAA+TGG + chr3_3:78904737-78904756 None:intergenic 60.0%
!! TTCTGCTCCTCGGTTTGGGC+TGG - chr3_3:78904737-78904756 Msa0475600:intron 60.0%
!! CTCCTCGGTTTGGGCTGGTA+TGG - chr3_3:78904742-78904761 Msa0475600:intron 60.0%
GAAGCGAGGGGTCCCCATTT+AGG + chr3_3:78907002-78907021 None:intergenic 60.0%
!! GACGAGGGGGCACCCTATTA+TGG - chr3_3:78907867-78907886 Msa0475600:intron 60.0%
AAGCACGCACCGCGAGAGAA+GGG + chr3_3:78908605-78908624 None:intergenic 60.0%
AAAGCACGCACCGCGAGAGA+AGG + chr3_3:78908606-78908625 None:intergenic 60.0%
! TGCTGTTGCTTCCCACTCGC+TGG - chr3_3:78909244-78909263 Msa0475600:intron 60.0%
TTTGGATGGGGCCAGCGAGT+GGG + chr3_3:78909258-78909277 None:intergenic 60.0%
ATTTGGATGGGGCCAGCGAG+TGG + chr3_3:78909259-78909278 None:intergenic 60.0%
CTTGGTCTCTTGGGGCCTTG+GGG - chr3_3:78910762-78910781 Msa0475600:intron 60.0%
TTGGTCTCTTGGGGCCTTGG+GGG - chr3_3:78910763-78910782 Msa0475600:intron 60.0%
TAGCGCCTCACATTCTGGGC+CGG - chr3_3:78911597-78911616 Msa0475600:intron 60.0%
GTTGCCAGCGGTAGCGATGA+TGG - chr3_3:78912686-78912705 Msa0475600:intron 60.0%
TCTGCCATCATCGCTACCGC+TGG + chr3_3:78912693-78912712 None:intergenic 60.0%
! GCGGTAGCGATGATGGCAGA+TGG - chr3_3:78912693-78912712 Msa0475600:intron 60.0%
GCCGAACATAGCACCTGCAG+TGG + chr3_3:78914241-78914260 None:intergenic 60.0%
!! GAGCTTGTAGCCTCTGGGGC+TGG - chr3_3:78903299-78903318 Msa0475600:intron 65.0%
TGACCCTGCGAGTGTGGCAC+TGG + chr3_3:78903485-78903504 None:intergenic 65.0%
GGCACCTCTTGTCCTCCTGC+AGG - chr3_3:78903705-78903724 Msa0475600:CDS 65.0%
GTTGGGGTCGTTGGGAGGGA+AGG + chr3_3:78904561-78904580 None:intergenic 65.0%
TGTGGGGTGGGTGGGGTGAA+TGG - chr3_3:78905880-78905899 Msa0475600:intron 65.0%
GGGTGGGTGGGGTGAATGGT+GGG - chr3_3:78905884-78905903 Msa0475600:intron 65.0%
GGTGGGTGGGGTGAATGGTG+GGG - chr3_3:78905885-78905904 Msa0475600:intron 65.0%
GTGGGTGGGGTGAATGGTGG+GGG - chr3_3:78905886-78905905 Msa0475600:intron 65.0%
! TGGGTGGGGTGAATGGTGGG+GGG - chr3_3:78905887-78905906 Msa0475600:intron 65.0%
ACGCACCGCGAGAGAAGGGT+GGG + chr3_3:78908601-78908620 None:intergenic 65.0%
GGAGCAGCCTTTACCTCCGC+AGG - chr3_3:78910117-78910136 Msa0475600:CDS 65.0%
GGTCGCTATGCTCCGCTGCT+CGG - chr3_3:78910550-78910569 Msa0475600:intron 65.0%
GTCGCTATGCTCCGCTGCTC+GGG - chr3_3:78910551-78910570 Msa0475600:intron 65.0%
AGCGCCTCACATTCTGGGCC+GGG - chr3_3:78911598-78911617 Msa0475600:intron 65.0%
CCTCACATTCTGGGCCGGGT+CGG - chr3_3:78911602-78911621 Msa0475600:intron 65.0%
CTCACATTCTGGGCCGGGTC+GGG - chr3_3:78911603-78911622 Msa0475600:intron 65.0%
GGGTTGTGCAGAACCCGACC+CGG + chr3_3:78911619-78911638 None:intergenic 65.0%
GGGGTGGGTGGGGTGAATGG+TGG - chr3_3:78905883-78905902 Msa0475600:intron 70.0%
GGACCCCCACCCTTCTCTCG+CGG - chr3_3:78908593-78908612 Msa0475600:intron 70.0%
GCACCGCGAGAGAAGGGTGG+GGG + chr3_3:78908599-78908618 None:intergenic 70.0%
CGCACCGCGAGAGAAGGGTG+GGG + chr3_3:78908600-78908619 None:intergenic 70.0%
CACGCACCGCGAGAGAAGGG+TGG + chr3_3:78908602-78908621 None:intergenic 70.0%
CCGACCCGGCCCAGAATGTG+AGG + chr3_3:78911605-78911624 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 78901996 78914627 78901996 ID=Msa0475600;Name=Msa0475600
chr3_3 mRNA 78901996 78914627 78901996 ID=Msa0475600-mRNA-1;Parent=Msa0475600;Name=Msa0475600-mRNA-1;_AED=0.10;_eAED=0.10;_QI=165|1|1|1|0.94|0.9|20|405|760
chr3_3 exon 78901996 78902376 78901996 ID=Msa0475600-mRNA-1:exon:21379;Parent=Msa0475600-mRNA-1
chr3_3 exon 78902829 78902940 78902829 ID=Msa0475600-mRNA-1:exon:21378;Parent=Msa0475600-mRNA-1
chr3_3 exon 78903490 78903617 78903490 ID=Msa0475600-mRNA-1:exon:21377;Parent=Msa0475600-mRNA-1
chr3_3 exon 78903699 78903769 78903699 ID=Msa0475600-mRNA-1:exon:21376;Parent=Msa0475600-mRNA-1
chr3_3 exon 78903850 78903945 78903850 ID=Msa0475600-mRNA-1:exon:21375;Parent=Msa0475600-mRNA-1
chr3_3 exon 78905283 78905373 78905283 ID=Msa0475600-mRNA-1:exon:21374;Parent=Msa0475600-mRNA-1
chr3_3 exon 78906660 78906997 78906660 ID=Msa0475600-mRNA-1:exon:21373;Parent=Msa0475600-mRNA-1
chr3_3 exon 78907297 78907408 78907297 ID=Msa0475600-mRNA-1:exon:21372;Parent=Msa0475600-mRNA-1
chr3_3 exon 78908411 78908521 78908411 ID=Msa0475600-mRNA-1:exon:21371;Parent=Msa0475600-mRNA-1
chr3_3 exon 78908634 78908801 78908634 ID=Msa0475600-mRNA-1:exon:21370;Parent=Msa0475600-mRNA-1
chr3_3 exon 78908921 78909066 78908921 ID=Msa0475600-mRNA-1:exon:21369;Parent=Msa0475600-mRNA-1
chr3_3 exon 78910081 78910186 78910081 ID=Msa0475600-mRNA-1:exon:21368;Parent=Msa0475600-mRNA-1
chr3_3 exon 78911023 78911140 78911023 ID=Msa0475600-mRNA-1:exon:21367;Parent=Msa0475600-mRNA-1
chr3_3 exon 78911223 78911338 78911223 ID=Msa0475600-mRNA-1:exon:21366;Parent=Msa0475600-mRNA-1
chr3_3 exon 78912865 78912993 78912865 ID=Msa0475600-mRNA-1:exon:21365;Parent=Msa0475600-mRNA-1
chr3_3 exon 78913108 78913215 78913108 ID=Msa0475600-mRNA-1:exon:21364;Parent=Msa0475600-mRNA-1
chr3_3 exon 78913292 78913426 78913292 ID=Msa0475600-mRNA-1:exon:21363;Parent=Msa0475600-mRNA-1
chr3_3 exon 78913580 78913657 78913580 ID=Msa0475600-mRNA-1:exon:21362;Parent=Msa0475600-mRNA-1
chr3_3 exon 78914171 78914242 78914171 ID=Msa0475600-mRNA-1:exon:21361;Parent=Msa0475600-mRNA-1
chr3_3 exon 78914391 78914627 78914391 ID=Msa0475600-mRNA-1:exon:21360;Parent=Msa0475600-mRNA-1
chr3_3 five_prime_UTR 78914463 78914627 78914463 ID=Msa0475600-mRNA-1:five_prime_utr;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78914391 78914462 78914391 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78914171 78914242 78914171 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78913580 78913657 78913580 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78913292 78913426 78913292 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78913108 78913215 78913108 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78912865 78912993 78912865 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78911223 78911338 78911223 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78911023 78911140 78911023 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78910081 78910186 78910081 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78908921 78909066 78908921 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78908634 78908801 78908634 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78908411 78908521 78908411 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78907297 78907408 78907297 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78906660 78906997 78906660 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78905283 78905373 78905283 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78903850 78903945 78903850 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78903699 78903769 78903699 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78903490 78903617 78903490 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 CDS 78902853 78902940 78902853 ID=Msa0475600-mRNA-1:cds;Parent=Msa0475600-mRNA-1
chr3_3 three_prime_UTR 78902829 78902852 78902829 ID=Msa0475600-mRNA-1:three_prime_utr;Parent=Msa0475600-mRNA-1
chr3_3 three_prime_UTR 78901996 78902376 78901996 ID=Msa0475600-mRNA-1:three_prime_utr;Parent=Msa0475600-mRNA-1
Gene Sequence

>Msa0475600

ATGGATTCCACTCCTTTTCTCGACGGAAACATACACAAAATTCTCGATTCCAGATACCTTCACTCTCGCCCTGATGTTGTTAATCAGAGTTTGCAGACACACTCCTCTTTGATTCGCAGACTTTCTCAAGAAAAAGAGTTAGAGGGACATCTTGGTTGTGTCAATGCTATTGCTTGGAATTCAAAAGGTTCATTATTGGTATCCGGATCAGATGATACGCGGATCAATGTTTGGAGCTATGCTGGTCAGAAACTAGTGCATTCAATTGACACCGGACATACTGCAAATATATTCTGTACTAAGTTCATACCAGAAACATCTGATGAGCTTGTAGCCTCTGGGGCTGGAGATGCTGAAGTTCGGTTATTCAACAGGTCTCGCGTAAGTGGGAATGGACTTAATGATAATCCCATTACTCCATCAGCACTTTACCAGTGCCACACTCGCAGGGTCAAGAAATTGGCTGTTGAAAATGGAAACCCCAATGTGGTATGGAGTGCCAGTGAAGATGGAACCTTAAGACAACATGATTTTCGGGAAGGCACCTCTTGTCCTCCTGCAGGATCTCCACACCAAGAGTGTCACAATGTTCTACTTGACTTACGGAATGGAGCTAAAAGATCCCTTGGTGATCCTCCTAAACAAGTCCTTGCTTTAAAATCTTTCGATATTAGTTCAACTAGACCTCATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGTCTGTATGATAGAAGGATGCTACCACCTCTAAGCTCCTGTGGAAAAAGAATGCCTCCACCTCCTTGTGTTAATTATTTTTGTCCAATGCACCTTTCTGATCGTGGACATCCAAGTTTGCACTTAACTCATGTTACATTTAGTCCTGATGGATCTGAGGTTCTCCTGAGCTATAGCGGAGAGCATGTTTACTTGATGAATGTAAATCATGCTGGTGTGAATGAGGTGCAATATACTTCAGAAGATGTTTCAAAGCTGATGACTTACTCTCCAAGCGTTAATGGGGTAGAATTACAGCCTTTTGTTTCCAATGTCTTCACAAATGGTTTTCACACTAAAAATAACATCACTGCCAAGCTTGACAAGTGTAGGAAACTAATAAAATATGCTAAGAAGTCATTGGACGAGGGGGCACCCTATTATGGAATTGAGGCATGTAATGAAGTTTTGAATGGCTACAATCATATTATTGGACCTGCACTAAAACAGGAATGCTTGTGTACTCGTGCTGCACTATTGCTTAAGAGGAAGTGGAAAAACGATGCTCATATGGCTATAAGAGACTGCCATGCTGCTAGGAAATTTGATAAATCCGCATATAAACCACTTTACTACATGTCAGAAGCATTGTCTCAGTTGGGAAAACACAAAGAAGCTTTGGATTTTGCTGTTGCTTCCCACTCGCTGGCCCCATCCAAATCTGAAGTTGCTGAAAGAGTGGAGAATGTGAAGAAGGATATGGTTTTAGCTGAAACTGAGAAAAATAGCAAGACAAATAATGGAAGAGGTGGAAGAATGTTATCATTAAGTGACATTCTCTACCGGACAGAGGCTAATAGTGATACTTCACAAGATGGTCAGAGATCTGACAGGGATGATTCTGATTATGACGAGGAAATGGAGTTGGACTTCGAAACATCAGTGTCTGGTGACGAGGAACAAGATTCTGATTCAAATATTCTTCACCGGAGTATGAATCGTAGAATTCATCGAAGAGGTGACTCAAGAGAAAATGCTGAAGCAAGTGGCTCGGACGAATCACCCTCATCATCATCATCATCACAGAATGGTAGAGCTTCATACCAGCCCGAAGCAGCTATTGATATGAAGCAGAGGTTTATTGGGCACTGCAATGTGGGGACTGATATAAAACAGGCTAATTTTCTTGGTCAAAAAGGTGAATATGTTGCCAGCGGTAGCGATGATGGCAGATGGTTTATTTGGGAAAAGCGAACTGGAAGACTCATGAAATTGCTGAGTGGCGATGAATCTGTTGTAAATTGCGTACAATGTCATCCATTTGATTTTGTTGTGGCAACAAGTGGGATTGATAACACGATAAAGATATGGACTCCAAGTGCTCCTGTTGCATCTTCTGTAGCTGGTGGTTCTGCAGGACCAGAAACTGGTGATGTGTTGGGTGCTATGGAGAACAATCAACAAAAGTTATCCCGTAATAGGGATTCAATGCTGCCCTTTGAGCTCTTAGAACCATTTAGAATGCATGAGTTTCCTGAAGGATCACTACGCTTGCGACCTTTTGAATGTGCCCAAACCTAA
Protein sequence

>Msa0475600

MDSTPFLDGNIHKILDSRYLHSRPDVVNQSLQTHSSLIRRLSQEKELEGHLGCVNAIAWNSKGSLLVSGSDDTRINVWSYAGQKLVHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVRLFNRSRVSGNGLNDNPITPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSPHQECHNVLLDLRNGAKRSLGDPPKQVLALKSFDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGSEVLLSYSGEHVYLMNVNHAGVNEVQYTSEDVSKLMTYSPSVNGVELQPFVSNVFTNGFHTKNNITAKLDKCRKLIKYAKKSLDEGAPYYGIEACNEVLNGYNHIIGPALKQECLCTRAALLLKRKWKNDAHMAIRDCHAARKFDKSAYKPLYYMSEALSQLGKHKEALDFAVASHSLAPSKSEVAERVENVKKDMVLAETEKNSKTNNGRGGRMLSLSDILYRTEANSDTSQDGQRSDRDDSDYDEEMELDFETSVSGDEEQDSDSNILHRSMNRRIHRRGDSRENAEASGSDESPSSSSSSQNGRASYQPEAAIDMKQRFIGHCNVGTDIKQANFLGQKGEYVASGSDDGRWFIWEKRTGRLMKLLSGDESVVNCVQCHPFDFVVATSGIDNTIKIWTPSAPVASSVAGGSAGPETGDVLGAMENNQQKLSRNRDSMLPFELLEPFRMHEFPEGSLRLRPFECAQT*