Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878530 | XP_039685079.1 | 73.934 | 633 | 136 | 5 | 1 | 616 | 63 | 683 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878530 | A0A396HF22 | 68.000 | 300 | 55 | 1 | 1 | 300 | 22 | 280 | 4.35e-134 | 402 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0210730 | Msa0878530 | 0.821358 | 4.212156e-53 | -8.615850e-47 |
| Msa0317780 | Msa0878530 | 0.833165 | 6.236892e-56 | -8.615850e-47 |
| Msa0342760 | Msa0878530 | 0.859004 | 5.581929e-63 | -8.615850e-47 |
| Msa0352050 | Msa0878530 | 0.875807 | 2.303612e-68 | -8.615850e-47 |
| Msa0878530 | Msa0900920 | 0.835671 | 1.465337e-56 | -8.615850e-47 |
| Msa0878530 | Msa0952380 | 0.803354 | 3.628100e-49 | -8.615850e-47 |
| Msa0878530 | Msa0954640 | 0.803069 | 4.156473e-49 | -8.615850e-47 |
| Msa0878530 | Msa1025910 | 0.856686 | 2.719847e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878530 | MtrunA17_Chr6g0474521 | 68.000 | 300 | 55 | 1 | 1 | 300 | 22 | 280 | 8.38e-138 | 402 |
| Msa0878530 | MtrunA17_Chr1g0162981 | 62.162 | 148 | 52 | 1 | 194 | 337 | 1 | 148 | 5.11e-54 | 181 |
| Msa0878530 | MtrunA17_Chr7g0265121 | 38.211 | 123 | 75 | 1 | 1 | 123 | 50 | 171 | 3.68e-24 | 100 |
| Msa0878530 | MtrunA17_Chr4g0074611 | 38.211 | 123 | 75 | 1 | 1 | 123 | 50 | 171 | 3.68e-24 | 100 |
| Msa0878530 | MtrunA17_Chr4g0012881 | 25.521 | 192 | 126 | 6 | 1 | 184 | 69 | 251 | 3.29e-16 | 82.0 |
| Msa0878530 | MtrunA17_Chr4g0074621 | 96.552 | 29 | 1 | 0 | 1 | 29 | 63 | 91 | 2.52e-12 | 63.2 |
| Msa0878530 | MtrunA17_Chr1g0175971 | 96.552 | 29 | 1 | 0 | 1 | 29 | 63 | 91 | 2.52e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878530 | AT4G00690.1 | 29.452 | 146 | 88 | 6 | 450 | 587 | 203 | 341 | 5.77e-11 | 64.7 |
Find 157 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 6_1:-19656454 | Msa0878530:CDS |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 6_1:-19656359 | Msa0878530:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 6_1:-19656722 | Msa0878530:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 6_1:+19656190 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 6_1:-19654934 | Msa0878530:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 6_1:-19653965 | Msa0878530:CDS |
| TATATAGATAAAGGGGTATT+AGG | 0.287945 | 6_1:+19651993 | None:intergenic |
| AGAAATACATATATAGATAA+AGG | 0.290515 | 6_1:+19651984 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 6_1:+19656509 | None:intergenic |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.293529 | 6_1:+19656733 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 6_1:-19655808 | Msa0878530:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 6_1:-19653775 | Msa0878530:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 6_1:-19656453 | Msa0878530:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 6_1:-19653927 | Msa0878530:intron |
| TTATCGAAGGTCATATATAA+AGG | 0.331004 | 6_1:-19651925 | Msa0878530:three_prime_UTR |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 6_1:-19656707 | Msa0878530:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 6_1:+19656203 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 6_1:+19654906 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 6_1:-19655120 | Msa0878530:intron |
| ATTCCACTACCCCTTCAAAA+TGG | 0.350168 | 6_1:+19654016 | None:intergenic |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 6_1:+19656442 | None:intergenic |
| TCTATATATGTATTTCTTTG+AGG | 0.369379 | 6_1:-19651978 | Msa0878530:three_prime_UTR |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 6_1:+19654227 | None:intergenic |
| AACAGAAAGATTTGCTTTCC+CGG | 0.369992 | 6_1:-19655854 | Msa0878530:CDS |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 6_1:-19655942 | Msa0878530:CDS |
| ATAAAGGGGTATTAGGATAA+AGG | 0.373190 | 6_1:+19652000 | None:intergenic |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 6_1:-19653988 | Msa0878530:CDS |
| GAAATACATATATAGATAAA+GGG | 0.379203 | 6_1:+19651985 | None:intergenic |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 6_1:-19656339 | Msa0878530:intron |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 6_1:-19656679 | Msa0878530:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 6_1:+19656582 | None:intergenic |
| GGAGTTGTATGATGATGATA+TGG | 0.391253 | 6_1:-19655508 | Msa0878530:CDS |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 6_1:+19652146 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 6_1:+19655759 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 6_1:-19656012 | Msa0878530:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 6_1:-19653774 | Msa0878530:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 6_1:-19654143 | Msa0878530:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 6_1:-19654003 | Msa0878530:CDS |
| TTTGTCTAACTTGATTGTGC+TGG | 0.411331 | 6_1:-19652086 | Msa0878530:three_prime_UTR |
| GGGTGAAGAAGAAAAGAAAA+TGG | 0.414661 | 6_1:-19655553 | Msa0878530:CDS |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 6_1:+19656674 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 6_1:-19652193 | Msa0878530:CDS |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 6_1:-19656729 | Msa0878530:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 6_1:+19656204 | None:intergenic |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 6_1:-19653801 | Msa0878530:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 6_1:-19653962 | Msa0878530:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 6_1:+19656332 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 6_1:-19655796 | Msa0878530:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 6_1:-19655600 | Msa0878530:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 6_1:-19653950 | Msa0878530:CDS |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 6_1:+19656695 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 6_1:+19654889 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 6_1:-19653793 | Msa0878530:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 6_1:-19655705 | Msa0878530:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.465925 | 6_1:-19655499 | Msa0878530:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 6_1:-19656018 | Msa0878530:intron |
| AGGTGGGATGCAAGTAGCTT+GGG | 0.470670 | 6_1:-19656782 | Msa0878530:CDS |
| TGGGATTTAGAGTAGGCGTT+AGG | 0.472541 | 6_1:-19656763 | Msa0878530:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 6_1:-19653792 | Msa0878530:CDS |
| TAATATTCGTTGGTGTATCA+TGG | 0.485490 | 6_1:-19652033 | Msa0878530:three_prime_UTR |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 6_1:-19654207 | Msa0878530:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 6_1:+19656328 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 6_1:-19656693 | Msa0878530:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 6_1:-19655655 | Msa0878530:CDS |
| ATGGAAGAAGATAAAGACAA+TGG | 0.499732 | 6_1:-19655534 | Msa0878530:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 6_1:+19655947 | None:intergenic |
| ACCATGACCTCCATCCACTT+TGG | 0.501951 | 6_1:+19656156 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 6_1:-19656593 | Msa0878530:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 6_1:+19655836 | None:intergenic |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 6_1:+19655940 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 6_1:+19654191 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 6_1:+19653737 | None:intergenic |
| TAGGTGGGATGCAAGTAGCT+TGG | 0.510938 | 6_1:-19656783 | Msa0878530:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 6_1:+19653736 | None:intergenic |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 6_1:-19653953 | Msa0878530:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 6_1:-19655533 | Msa0878530:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 6_1:-19655948 | Msa0878530:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 6_1:-19654185 | Msa0878530:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 6_1:-19655116 | Msa0878530:CDS |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 6_1:-19652221 | Msa0878530:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 6_1:-19655801 | Msa0878530:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 6_1:-19655666 | Msa0878530:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 6_1:-19655687 | Msa0878530:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 6_1:+19654845 | None:intergenic |
| ACCAAAGTGGATGGAGGTCA+TGG | 0.533114 | 6_1:-19656157 | Msa0878530:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 6_1:-19652120 | Msa0878530:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 6_1:+19656198 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 6_1:-19653744 | Msa0878530:intron |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 6_1:-19656592 | Msa0878530:CDS |
| ACAGAAAGATTTGCTTTCCC+GGG | 0.541597 | 6_1:-19655853 | Msa0878530:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 6_1:-19653977 | Msa0878530:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 6_1:-19655827 | Msa0878530:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 6_1:-19655887 | Msa0878530:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 6_1:+19654228 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 6_1:-19655756 | Msa0878530:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 6_1:-19656678 | Msa0878530:CDS |
| TCAAGATATATATGCCTCGT+TGG | 0.560933 | 6_1:-19654869 | Msa0878530:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 6_1:-19655769 | Msa0878530:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 6_1:-19655838 | Msa0878530:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 6_1:+19655835 | None:intergenic |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 6_1:-19655797 | Msa0878530:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 6_1:-19655592 | Msa0878530:CDS |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 6_1:-19654231 | Msa0878530:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 6_1:-19655084 | Msa0878530:CDS |
| AAATACATATATAGATAAAG+GGG | 0.575274 | 6_1:+19651986 | None:intergenic |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 6_1:+19655823 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 6_1:-19655883 | Msa0878530:CDS |
| AGTAGCTTGGGATTTAGAGT+AGG | 0.584499 | 6_1:-19656770 | Msa0878530:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 6_1:+19656175 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 6_1:+19655765 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 6_1:-19655529 | Msa0878530:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 6_1:-19654905 | Msa0878530:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 6_1:-19656408 | Msa0878530:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 6_1:-19655574 | Msa0878530:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 6_1:-19656606 | Msa0878530:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 6_1:-19656166 | Msa0878530:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 6_1:-19655665 | Msa0878530:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 6_1:+19654232 | None:intergenic |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 6_1:+19652117 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 6_1:-19654921 | Msa0878530:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 6_1:-19656170 | Msa0878530:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 6_1:+19656333 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 6_1:-19655631 | Msa0878530:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 6_1:-19654215 | Msa0878530:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 6_1:-19654201 | Msa0878530:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 6_1:-19655762 | Msa0878530:CDS |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 6_1:-19655741 | Msa0878530:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 6_1:-19655599 | Msa0878530:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 6_1:-19654845 | Msa0878530:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 6_1:-19655991 | Msa0878530:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 6_1:-19653773 | Msa0878530:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 6_1:-19655688 | Msa0878530:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 6_1:-19654131 | Msa0878530:intron |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 6_1:-19656239 | Msa0878530:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 6_1:+19652205 | None:intergenic |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 6_1:-19656591 | Msa0878530:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 6_1:-19653788 | Msa0878530:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 6_1:-19655573 | Msa0878530:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 6_1:-19655639 | Msa0878530:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 6_1:+19654138 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 6_1:+19656529 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 6_1:-19654153 | Msa0878530:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 6_1:-19655704 | Msa0878530:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 6_1:-19655691 | Msa0878530:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 6_1:-19656163 | Msa0878530:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 6_1:+19656717 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 6_1:-19655755 | Msa0878530:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 6_1:-19654853 | Msa0878530:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 6_1:-19656214 | Msa0878530:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 6_1:-19656452 | Msa0878530:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 6_1:+19652116 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 6_1:+19654215 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 6_1:-19654896 | Msa0878530:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 6_1:+19654855 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 6_1:-19652133 | Msa0878530:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 6_1:-19653772 | Msa0878530:CDS |
| TAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 6_1:-19655715 | Msa0878530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | + | chr6_1:19653489-19653508 | None:intergenic | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | + | chr6_1:19655198-19655217 | None:intergenic | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | + | chr6_1:19655694-19655713 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | - | chr6_1:19656177-19656196 | Msa0878530:CDS | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | - | chr6_1:19656393-19656412 | Msa0878530:CDS | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | - | chr6_1:19656394-19656413 | Msa0878530:CDS | 10.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | + | chr6_1:19653482-19653501 | None:intergenic | 15.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | + | chr6_1:19653531-19653550 | None:intergenic | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | - | chr6_1:19653629-19653648 | Msa0878530:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | - | chr6_1:19654574-19654593 | Msa0878530:intron | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | - | chr6_1:19656395-19656414 | Msa0878530:CDS | 15.0% |
| !! | AAATACATATATAGATAAAG+GGG | + | chr6_1:19656692-19656711 | None:intergenic | 15.0% |
| !! | GAAATACATATATAGATAAA+GGG | + | chr6_1:19656693-19656712 | None:intergenic | 15.0% |
| !! | AGAAATACATATATAGATAA+AGG | + | chr6_1:19656694-19656713 | None:intergenic | 15.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | + | chr6_1:19652169-19652188 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | - | chr6_1:19652432-19652451 | Msa0878530:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | - | chr6_1:19652433-19652452 | Msa0878530:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | - | chr6_1:19653539-19653558 | Msa0878530:intron | 20.0% |
| !! | ATTTAATTAATGTTAGGCAT+GGG | + | chr6_1:19653714-19653733 | None:intergenic | 20.0% |
| !! | AATTTAATTAATGTTAGGCA+TGG | + | chr6_1:19653715-19653734 | None:intergenic | 20.0% |
| !! | ACTGCAATTTAATTAATGTT+AGG | + | chr6_1:19653720-19653739 | None:intergenic | 20.0% |
| !! | ATTAATTAAATTGCAGTTTG+AGG | - | chr6_1:19653723-19653742 | Msa0878530:intron | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | + | chr6_1:19654342-19654361 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | - | chr6_1:19654802-19654821 | Msa0878530:intron | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | - | chr6_1:19654803-19654822 | Msa0878530:intron | 20.0% |
| !! | AATAACTCACTAGAATATAT+GGG | - | chr6_1:19655338-19655357 | Msa0878530:intron | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | - | chr6_1:19655366-19655385 | Msa0878530:intron | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | + | chr6_1:19655523-19655542 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | + | chr6_1:19655619-19655638 | None:intergenic | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | - | chr6_1:19655734-19655753 | Msa0878530:CDS | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | + | chr6_1:19656303-19656322 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | - | chr6_1:19656303-19656322 | Msa0878530:intron | 20.0% |
| !! | TCTATATATGTATTTCTTTG+AGG | - | chr6_1:19656697-19656716 | Msa0878530:CDS | 20.0% |
| !! | TTCGATAACAAAACAAAAAA+AGG | + | chr6_1:19656738-19656757 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTTTGTTATCGA+AGG | - | chr6_1:19656737-19656756 | Msa0878530:CDS | 20.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | - | chr6_1:19652267-19652286 | Msa0878530:intron | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | + | chr6_1:19652350-19652369 | None:intergenic | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | - | chr6_1:19652580-19652599 | Msa0878530:intron | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | + | chr6_1:19652586-19652605 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | - | chr6_1:19652587-19652606 | Msa0878530:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | - | chr6_1:19652588-19652607 | Msa0878530:intron | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | - | chr6_1:19652651-19652670 | Msa0878530:intron | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | + | chr6_1:19652655-19652674 | None:intergenic | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | - | chr6_1:19652867-19652886 | Msa0878530:intron | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | - | chr6_1:19652874-19652893 | Msa0878530:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | - | chr6_1:19653377-19653396 | Msa0878530:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | + | chr6_1:19654011-19654030 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | - | chr6_1:19654055-19654074 | Msa0878530:intron | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | - | chr6_1:19654130-19654149 | Msa0878530:intron | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | + | chr6_1:19654300-19654319 | None:intergenic | 25.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | + | chr6_1:19654301-19654320 | None:intergenic | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | - | chr6_1:19654748-19654767 | Msa0878530:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | + | chr6_1:19655129-19655148 | None:intergenic | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | - | chr6_1:19655149-19655168 | Msa0878530:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | - | chr6_1:19655236-19655255 | Msa0878530:intron | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | - | chr6_1:19655237-19655256 | Msa0878530:intron | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | + | chr6_1:19655283-19655302 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | - | chr6_1:19655280-19655299 | Msa0878530:intron | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | - | chr6_1:19655281-19655300 | Msa0878530:intron | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | - | chr6_1:19655314-19655333 | Msa0878530:intron | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | - | chr6_1:19655337-19655356 | Msa0878530:intron | 25.0% |
| ! | ATAACTCACTAGAATATATG+GGG | - | chr6_1:19655339-19655358 | Msa0878530:intron | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | + | chr6_1:19655474-19655493 | None:intergenic | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | + | chr6_1:19655475-19655494 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | + | chr6_1:19655524-19655543 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | - | chr6_1:19655522-19655541 | Msa0878530:CDS | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | + | chr6_1:19655564-19655583 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | + | chr6_1:19655616-19655635 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | - | chr6_1:19655644-19655663 | Msa0878530:CDS | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | - | chr6_1:19655758-19655777 | Msa0878530:CDS | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | + | chr6_1:19656010-19656029 | None:intergenic | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | + | chr6_1:19656022-19656041 | None:intergenic | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | + | chr6_1:19656023-19656042 | None:intergenic | 25.0% |
| !!! | ACTTTTTTCTACAATTTCCT+GGG | - | chr6_1:19656045-19656064 | Msa0878530:intron | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | - | chr6_1:19656074-19656093 | Msa0878530:intron | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | + | chr6_1:19656162-19656181 | None:intergenic | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | + | chr6_1:19656304-19656323 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | - | chr6_1:19656302-19656321 | Msa0878530:intron | 25.0% |
| !!! | TATATAGATAAAGGGGTATT+AGG | + | chr6_1:19656685-19656704 | None:intergenic | 25.0% |
| ! | TTATCGAAGGTCATATATAA+AGG | - | chr6_1:19656750-19656769 | Msa0878530:CDS | 25.0% |
| ACAAAGGTCTAGATGTTTAA+AGG | + | chr6_1:19651945-19651964 | None:intergenic | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | - | chr6_1:19651946-19651965 | Msa0878530:three_prime_UTR | 30.0% | |
| ! | CTGTATCATTCTTTTGTTGA+TGG | + | chr6_1:19652303-19652322 | None:intergenic | 30.0% |
| GATACAGTTATACACATTTC+TGG | - | chr6_1:19652316-19652335 | Msa0878530:intron | 30.0% | |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | - | chr6_1:19652550-19652569 | Msa0878530:intron | 30.0% |
| TAACCTTCGCATTTGAAAAA+AGG | + | chr6_1:19652556-19652575 | None:intergenic | 30.0% | |
| ! | TTAATGTGATTAGTTGGTTG+AGG | - | chr6_1:19652657-19652676 | Msa0878530:intron | 30.0% |
| AAGCTTGCACATCAAAAAAA+GGG | + | chr6_1:19652771-19652790 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | + | chr6_1:19652772-19652791 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGCAAGCTTATA+TGG | - | chr6_1:19652774-19652793 | Msa0878530:intron | 30.0% |
| TAAGTGTAGTAAGATTGATG+CGG | - | chr6_1:19652960-19652979 | Msa0878530:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | - | chr6_1:19653010-19653029 | Msa0878530:intron | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | - | chr6_1:19653056-19653075 | Msa0878530:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | - | chr6_1:19653075-19653094 | Msa0878530:intron | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | - | chr6_1:19653076-19653095 | Msa0878530:intron | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | - | chr6_1:19653141-19653160 | Msa0878530:intron | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | - | chr6_1:19653142-19653161 | Msa0878530:intron | 30.0% | |
| GGCTGAAAAGGAAAAAAAAA+AGG | - | chr6_1:19653188-19653207 | Msa0878530:intron | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | - | chr6_1:19653246-19653265 | Msa0878530:intron | 30.0% | |
| !!! | AACTACATTTTTTCATGTCG+CGG | - | chr6_1:19653308-19653327 | Msa0878530:intron | 30.0% |
| CCAGCAATATTAATAACCTA+AGG | + | chr6_1:19653558-19653577 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | - | chr6_1:19653555-19653574 | Msa0878530:intron | 30.0% | |
| !! | TGTCAGATTATTTTTCGGTA+CGG | - | chr6_1:19653634-19653653 | Msa0878530:intron | 30.0% |
| TAAAGGTTGAATACACATCA+CGG | + | chr6_1:19653687-19653706 | None:intergenic | 30.0% | |
| !! | TGAGGTAGTTGATGATTTAA+AGG | - | chr6_1:19653741-19653760 | Msa0878530:intron | 30.0% |
| AGTCATCATTATGATGTTGT+AGG | - | chr6_1:19653887-19653906 | Msa0878530:intron | 30.0% | |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | - | chr6_1:19654075-19654094 | Msa0878530:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | - | chr6_1:19654189-19654208 | Msa0878530:CDS | 30.0% |
| AACAAAACTCGCAAAATTAG+GGG | + | chr6_1:19654299-19654318 | None:intergenic | 30.0% | |
| ! | TTACAGAAAGTCCATTTTGA+AGG | - | chr6_1:19654648-19654667 | Msa0878530:intron | 30.0% |
| ! | TACAGAAAGTCCATTTTGAA+GGG | - | chr6_1:19654649-19654668 | Msa0878530:intron | 30.0% |
| ! | GTAGTGGAATTGATGAATAA+AGG | - | chr6_1:19654672-19654691 | Msa0878530:intron | 30.0% |
| AATAAAGGAGCGAACAATAA+AGG | - | chr6_1:19654687-19654706 | Msa0878530:intron | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | - | chr6_1:19654698-19654717 | Msa0878530:intron | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | - | chr6_1:19654710-19654729 | Msa0878530:intron | 30.0% | |
| !! | ACTAACCAATTTTGTTGCTT+TGG | + | chr6_1:19654756-19654775 | None:intergenic | 30.0% |
| ! | AAATTTTGCAGTCATGATTG+TGG | - | chr6_1:19654851-19654870 | Msa0878530:CDS | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | - | chr6_1:19654852-19654871 | Msa0878530:CDS | 30.0% |
| GGTATATGTTCTTAAGTACT+TGG | - | chr6_1:19654874-19654893 | Msa0878530:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | + | chr6_1:19654942-19654961 | None:intergenic | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | - | chr6_1:19655043-19655062 | Msa0878530:intron | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | + | chr6_1:19655097-19655116 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | + | chr6_1:19655098-19655117 | None:intergenic | 30.0% | |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | - | chr6_1:19655248-19655267 | Msa0878530:intron | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | - | chr6_1:19655279-19655298 | Msa0878530:intron | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | - | chr6_1:19655315-19655334 | Msa0878530:intron | 30.0% |
| ATATTCTAGTGAGTTATTCC+CGG | + | chr6_1:19655336-19655355 | None:intergenic | 30.0% | |
| TAACTCACTAGAATATATGG+GGG | - | chr6_1:19655340-19655359 | Msa0878530:intron | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | - | chr6_1:19655409-19655428 | Msa0878530:intron | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | + | chr6_1:19655512-19655531 | None:intergenic | 30.0% | |
| TTTATTCCTGTCAAATAGGA+TGG | - | chr6_1:19655526-19655545 | Msa0878530:CDS | 30.0% | |
| TTATTCCTGTCAAATAGGAT+GGG | - | chr6_1:19655527-19655546 | Msa0878530:CDS | 30.0% | |
| ! | GATTTTCACAGAAATTTACC+TGG | + | chr6_1:19655565-19655584 | None:intergenic | 30.0% |
| ATAGAAGTCCAAACTCAATT+GGG | + | chr6_1:19655791-19655810 | None:intergenic | 30.0% | |
| !!! | GACTTCTATGCATTGATTTT+GGG | - | chr6_1:19655802-19655821 | Msa0878530:CDS | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | - | chr6_1:19656044-19656063 | Msa0878530:intron | 30.0% |
| GATTCCAACATTTATATTCC+TGG | - | chr6_1:19656073-19656092 | Msa0878530:intron | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | + | chr6_1:19656080-19656099 | None:intergenic | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | + | chr6_1:19656109-19656128 | None:intergenic | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | + | chr6_1:19656110-19656129 | None:intergenic | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | + | chr6_1:19656145-19656164 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | - | chr6_1:19656262-19656281 | Msa0878530:intron | 30.0% | |
| !! | TTTATTTTCAAACGAGGGTT+GGG | + | chr6_1:19656298-19656317 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | + | chr6_1:19656299-19656318 | None:intergenic | 30.0% |
| TGTGTAAGTTATTTGTTTCC+AGG | - | chr6_1:19656327-19656346 | Msa0878530:intron | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | + | chr6_1:19656348-19656367 | None:intergenic | 30.0% | |
| TTATACACAGTAACACACAT+TGG | - | chr6_1:19656357-19656376 | Msa0878530:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | + | chr6_1:19656441-19656460 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | - | chr6_1:19656440-19656459 | Msa0878530:CDS | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | + | chr6_1:19656532-19656551 | None:intergenic | 30.0% | |
| ! | GCGTTTTGTATAATATTCGT+TGG | - | chr6_1:19656632-19656651 | Msa0878530:CDS | 30.0% |
| TAATATTCGTTGGTGTATCA+TGG | - | chr6_1:19656642-19656661 | Msa0878530:CDS | 30.0% | |
| !! | ATAAAGGGGTATTAGGATAA+AGG | + | chr6_1:19656678-19656697 | None:intergenic | 30.0% |
| TGAAGGAATTATTGCATAGG+TGG | - | chr6_1:19651876-19651895 | Msa0878530:three_prime_UTR | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | - | chr6_1:19651877-19651896 | Msa0878530:three_prime_UTR | 35.0% | |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | - | chr6_1:19651982-19652001 | Msa0878530:three_prime_UTR | 35.0% |
| TTTACCGGAAACTAGTGATA+GGG | - | chr6_1:19651997-19652016 | Msa0878530:three_prime_UTR | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | - | chr6_1:19652069-19652088 | Msa0878530:three_prime_UTR | 35.0% | |
| CGGAAAATATAACACACACA+AGG | + | chr6_1:19652149-19652168 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | - | chr6_1:19652221-19652240 | Msa0878530:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | - | chr6_1:19652222-19652241 | Msa0878530:intron | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | - | chr6_1:19652223-19652242 | Msa0878530:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | - | chr6_1:19652436-19652455 | Msa0878530:intron | 35.0% | |
| ! | GTTTTCCACGCATTAACAAT+TGG | - | chr6_1:19652495-19652514 | Msa0878530:intron | 35.0% |
| CATTAACAATTGGACCAAAG+TGG | - | chr6_1:19652505-19652524 | Msa0878530:intron | 35.0% | |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | + | chr6_1:19652691-19652710 | None:intergenic | 35.0% |
| ACCAACTTGAGAATGGTTAA+CGG | + | chr6_1:19652731-19652750 | None:intergenic | 35.0% | |
| !! | AACCATTCTCAAGTTGGTAT+TGG | - | chr6_1:19652733-19652752 | Msa0878530:intron | 35.0% |
| CTTATATGGCTGAACATCAA+AGG | - | chr6_1:19652788-19652807 | Msa0878530:intron | 35.0% | |
| ! | AACAGAAAGATTTGCTTTCC+CGG | - | chr6_1:19652821-19652840 | Msa0878530:intron | 35.0% |
| ATATCCTCATATCATCCTCA+AGG | + | chr6_1:19652855-19652874 | None:intergenic | 35.0% | |
| AAGATTGATGCGGATAATGA+TGG | - | chr6_1:19652970-19652989 | Msa0878530:intron | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | - | chr6_1:19652971-19652990 | Msa0878530:intron | 35.0% | |
| !! | TAATGATGGGTTGAAAAGTG+AGG | - | chr6_1:19652984-19653003 | Msa0878530:intron | 35.0% |
| GGAAAAGCAGAAGAAAATGA+TGG | - | chr6_1:19653009-19653028 | Msa0878530:intron | 35.0% | |
| ! | AGAAAATGATGGGATGAAGT+TGG | - | chr6_1:19653020-19653039 | Msa0878530:intron | 35.0% |
| AAGTTGGATGATGAAGATGT+TGG | - | chr6_1:19653036-19653055 | Msa0878530:intron | 35.0% | |
| !! | AGAAAATGATGATGGGATGA+AGG | - | chr6_1:19653083-19653102 | Msa0878530:intron | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | - | chr6_1:19653102-19653121 | Msa0878530:intron | 35.0% |
| GGGTGAAGAAGAAAAGAAAA+TGG | - | chr6_1:19653122-19653141 | Msa0878530:intron | 35.0% | |
| AGAAGATAAAGACAATGGGA+TGG | - | chr6_1:19653146-19653165 | Msa0878530:intron | 35.0% | |
| ! | GGAGTTGTATGATGATGATA+TGG | - | chr6_1:19653167-19653186 | Msa0878530:intron | 35.0% |
| ! | TGATGATGATATGGCTGAAA+AGG | - | chr6_1:19653176-19653195 | Msa0878530:intron | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | - | chr6_1:19653309-19653328 | Msa0878530:intron | 35.0% |
| AGGTTATTAATATTGCTGGC+AGG | - | chr6_1:19653559-19653578 | Msa0878530:intron | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | - | chr6_1:19653591-19653610 | Msa0878530:intron | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | + | chr6_1:19653704-19653723 | None:intergenic | 35.0% | |
| TCAAGATATATATGCCTCGT+TGG | - | chr6_1:19653806-19653825 | Msa0878530:CDS | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | - | chr6_1:19653907-19653926 | Msa0878530:intron | 35.0% | |
| ! | TTGTCTAGAATGTTGATGAG+TGG | - | chr6_1:19653936-19653955 | Msa0878530:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | - | chr6_1:19653937-19653956 | Msa0878530:CDS | 35.0% |
| CTCTACCTAAAATTCCCTTT+AGG | - | chr6_1:19654154-19654173 | Msa0878530:CDS | 35.0% | |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | - | chr6_1:19654188-19654207 | Msa0878530:CDS | 35.0% |
| GGGTTTGTGTTGTATTAGTT+CGG | - | chr6_1:19654209-19654228 | Msa0878530:CDS | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | - | chr6_1:19654212-19654231 | Msa0878530:CDS | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | - | chr6_1:19654213-19654232 | Msa0878530:CDS | 35.0% | |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | - | chr6_1:19654242-19654261 | Msa0878530:CDS | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | - | chr6_1:19654243-19654262 | Msa0878530:CDS | 35.0% |
| GCAAAATTAGGGGTTACAAT+AGG | + | chr6_1:19654289-19654308 | None:intergenic | 35.0% | |
| !!! | CGAATTTGTTTTATGCAACG+TGG | - | chr6_1:19654384-19654403 | Msa0878530:intron | 35.0% |
| !! | ACAGAAAGTCCATTTTGAAG+GGG | - | chr6_1:19654650-19654669 | Msa0878530:intron | 35.0% |
| TATGTTGGAATCTTCTTTGG+AGG | - | chr6_1:19654713-19654732 | Msa0878530:intron | 35.0% | |
| ! | ATTTTGCAGTCATGATTGTG+GGG | - | chr6_1:19654853-19654872 | Msa0878530:CDS | 35.0% |
| TTCTTAAGTACTTGGAGTTG+TGG | - | chr6_1:19654882-19654901 | Msa0878530:CDS | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | - | chr6_1:19654883-19654902 | Msa0878530:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | + | chr6_1:19654941-19654960 | None:intergenic | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | + | chr6_1:19655111-19655130 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | - | chr6_1:19655152-19655171 | Msa0878530:intron | 35.0% | |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | - | chr6_1:19655251-19655270 | Msa0878530:intron | 35.0% |
| TATTCTAGTGAGTTATTCCC+GGG | + | chr6_1:19655335-19655354 | None:intergenic | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | - | chr6_1:19655374-19655393 | Msa0878530:intron | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | + | chr6_1:19655394-19655413 | None:intergenic | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | + | chr6_1:19655395-19655414 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | - | chr6_1:19655416-19655435 | Msa0878530:intron | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | - | chr6_1:19655417-19655436 | Msa0878530:intron | 35.0% | |
| GGGAACAAAAAAATATGCCT+AGG | - | chr6_1:19655437-19655456 | Msa0878530:intron | 35.0% | |
| CCTGGGTATAATTTATTCCT+AGG | + | chr6_1:19655457-19655476 | None:intergenic | 35.0% | |
| CCTAGGAATAAATTATACCC+AGG | - | chr6_1:19655454-19655473 | Msa0878530:intron | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | + | chr6_1:19655513-19655532 | None:intergenic | 35.0% | |
| !! | AGGTGATAAGCATTGGTTAA+GGG | + | chr6_1:19655596-19655615 | None:intergenic | 35.0% |
| ATATAGGAGGTGATAAGCAT+TGG | + | chr6_1:19655603-19655622 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | + | chr6_1:19655777-19655796 | None:intergenic | 35.0% | |
| ! | GAATTTTCCCCAATTGAGTT+TGG | - | chr6_1:19655780-19655799 | Msa0878530:CDS | 35.0% |
| TAGAAGTCCAAACTCAATTG+GGG | + | chr6_1:19655790-19655809 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | + | chr6_1:19655792-19655811 | None:intergenic | 35.0% | |
| !!! | GGACTTCTATGCATTGATTT+TGG | - | chr6_1:19655801-19655820 | Msa0878530:CDS | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | - | chr6_1:19655809-19655828 | Msa0878530:CDS | 35.0% |
| TTACACATCCCTTTCCATAT+TGG | + | chr6_1:19655835-19655854 | None:intergenic | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | - | chr6_1:19655851-19655870 | Msa0878530:CDS | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | - | chr6_1:19655947-19655966 | Msa0878530:CDS | 35.0% | |
| !! | AAATGTCGATGGTATTGACA+GGG | - | chr6_1:19655958-19655977 | Msa0878530:CDS | 35.0% |
| TCATGCCATAAAAAATTCCC+AGG | - | chr6_1:19656002-19656021 | Msa0878530:CDS | 35.0% | |
| AATGTTGGAATCTTATTCCC+AGG | + | chr6_1:19656065-19656084 | None:intergenic | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | + | chr6_1:19656146-19656165 | None:intergenic | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | - | chr6_1:19656147-19656166 | Msa0878530:CDS | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | - | chr6_1:19656148-19656167 | Msa0878530:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | - | chr6_1:19656199-19656218 | Msa0878530:CDS | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | - | chr6_1:19656200-19656219 | Msa0878530:CDS | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | - | chr6_1:19656263-19656282 | Msa0878530:intron | 35.0% | |
| ! | TTATTTTCAAACGAGGGTTG+GGG | + | chr6_1:19656297-19656316 | None:intergenic | 35.0% |
| TAACTGCATTTACTTACAGG+AGG | - | chr6_1:19656443-19656462 | Msa0878530:CDS | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | + | chr6_1:19656562-19656581 | None:intergenic | 35.0% | |
| TTTGTCTAACTTGATTGTGC+TGG | - | chr6_1:19656589-19656608 | Msa0878530:CDS | 35.0% | |
| ! | AGTAGCTTGGGATTTAGAGT+AGG | - | chr6_1:19651905-19651924 | Msa0878530:three_prime_UTR | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | - | chr6_1:19651953-19651972 | Msa0878530:three_prime_UTR | 40.0% |
| GCAAACCTAAAGCCAAACAA+AGG | + | chr6_1:19651961-19651980 | None:intergenic | 40.0% | |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | - | chr6_1:19651968-19651987 | Msa0878530:three_prime_UTR | 40.0% |
| GGTAAACACTCTCCTACAAT+AGG | + | chr6_1:19651983-19652002 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | - | chr6_1:19651996-19652015 | Msa0878530:three_prime_UTR | 40.0% | |
| ! | CTAACCCTATCACTAGTTTC+CGG | + | chr6_1:19652004-19652023 | None:intergenic | 40.0% |
| AACAGCAACACCCCAATTAT+AGG | + | chr6_1:19652236-19652255 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | - | chr6_1:19652461-19652480 | Msa0878530:intron | 40.0% | |
| ! | CTTAATTGGACCACTGGTTA+GGG | + | chr6_1:19652474-19652493 | None:intergenic | 40.0% |
| AAAACGCTTAATTGGACCAC+TGG | + | chr6_1:19652480-19652499 | None:intergenic | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | + | chr6_1:19652488-19652507 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | + | chr6_1:19652503-19652522 | None:intergenic | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | - | chr6_1:19652509-19652528 | Msa0878530:intron | 40.0% | |
| ! | TGATTAGTTGGTTGAGGACT+TGG | - | chr6_1:19652663-19652682 | Msa0878530:intron | 40.0% |
| CTCCAATACCAACTTGAGAA+TGG | + | chr6_1:19652738-19652757 | None:intergenic | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | - | chr6_1:19652792-19652811 | Msa0878530:intron | 40.0% | |
| ! | ACAGAAAGATTTGCTTTCCC+GGG | - | chr6_1:19652822-19652841 | Msa0878530:intron | 40.0% |
| CAATCCTTGAGGATGATATG+AGG | - | chr6_1:19652848-19652867 | Msa0878530:intron | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | - | chr6_1:19652878-19652897 | Msa0878530:intron | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | - | chr6_1:19652879-19652898 | Msa0878530:intron | 40.0% | |
| ! | TGATGAAGATGTTGGTGAAG+AGG | - | chr6_1:19653044-19653063 | Msa0878530:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | - | chr6_1:19653101-19653120 | Msa0878530:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | - | chr6_1:19653754-19653773 | Msa0878530:CDS | 40.0% |
| AAGAAAACAGGCAGTGATGA+AGG | + | chr6_1:19653999-19654018 | None:intergenic | 40.0% | |
| ! | CACTGCCTAAAGGGAATTTT+AGG | + | chr6_1:19654162-19654181 | None:intergenic | 40.0% |
| CTAAAATTCCCTTTAGGCAG+TGG | - | chr6_1:19654160-19654179 | Msa0878530:CDS | 40.0% | |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | - | chr6_1:19654214-19654233 | Msa0878530:CDS | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | - | chr6_1:19654244-19654263 | Msa0878530:CDS | 40.0% |
| CATACATTGTCCTCTTCCTA+TGG | + | chr6_1:19654487-19654506 | None:intergenic | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | - | chr6_1:19654522-19654541 | Msa0878530:intron | 40.0% | |
| ATTCCACTACCCCTTCAAAA+TGG | + | chr6_1:19654662-19654681 | None:intergenic | 40.0% | |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | - | chr6_1:19654722-19654741 | Msa0878530:intron | 40.0% |
| GCTGTATATTTAGGGAATGC+GGG | + | chr6_1:19655089-19655108 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | + | chr6_1:19655090-19655109 | None:intergenic | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | - | chr6_1:19655383-19655402 | Msa0878530:intron | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | + | chr6_1:19655424-19655443 | None:intergenic | 40.0% | |
| ACTTTCCCATCCTATTTGAC+AGG | + | chr6_1:19655535-19655554 | None:intergenic | 40.0% | |
| !!! | GATGGGAAAGTTTTATTCCC+AGG | - | chr6_1:19655544-19655563 | Msa0878530:CDS | 40.0% |
| !! | GAGGTGATAAGCATTGGTTA+AGG | + | chr6_1:19655597-19655616 | None:intergenic | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | - | chr6_1:19655818-19655837 | Msa0878530:CDS | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | - | chr6_1:19655824-19655843 | Msa0878530:CDS | 40.0% |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | + | chr6_1:19655907-19655926 | None:intergenic | 40.0% |
| CTCAGGAAGGATTAGAGTTT+AGG | - | chr6_1:19655914-19655933 | Msa0878530:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | - | chr6_1:19655929-19655948 | Msa0878530:CDS | 40.0% | |
| !! | GAAATGTCGATGGTATTGAC+AGG | - | chr6_1:19655957-19655976 | Msa0878530:CDS | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | - | chr6_1:19655959-19655978 | Msa0878530:CDS | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | + | chr6_1:19656129-19656148 | None:intergenic | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | + | chr6_1:19656130-19656149 | None:intergenic | 40.0% |
| AACAAACGCACCCTAAATGT+TGG | - | chr6_1:19656132-19656151 | Msa0878530:CDS | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | - | chr6_1:19656133-19656152 | Msa0878530:CDS | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | + | chr6_1:19656276-19656295 | None:intergenic | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | - | chr6_1:19656454-19656473 | Msa0878530:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | - | chr6_1:19656482-19656501 | Msa0878530:CDS | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | - | chr6_1:19656555-19656574 | Msa0878530:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | + | chr6_1:19656561-19656580 | None:intergenic | 40.0% | |
| ! | TGGGATTTAGAGTAGGCGTT+AGG | - | chr6_1:19651912-19651931 | Msa0878530:three_prime_UTR | 45.0% |
| AAGCTGAAGGTCCTTCAAGA+AGG | - | chr6_1:19652082-19652101 | Msa0878530:three_prime_UTR | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | - | chr6_1:19652083-19652102 | Msa0878530:three_prime_UTR | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | + | chr6_1:19652345-19652364 | None:intergenic | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | + | chr6_1:19652346-19652365 | None:intergenic | 45.0% | |
| ! | GCTTAATTGGACCACTGGTT+AGG | + | chr6_1:19652475-19652494 | None:intergenic | 45.0% |
| AATTGGACCAAAGTGGATGG+AGG | - | chr6_1:19652512-19652531 | Msa0878530:intron | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | - | chr6_1:19652684-19652703 | Msa0878530:intron | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | - | chr6_1:19652727-19652746 | Msa0878530:intron | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | + | chr6_1:19652842-19652861 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | + | chr6_1:19652843-19652862 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | - | chr6_1:19652906-19652925 | Msa0878530:intron | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | + | chr6_1:19652913-19652932 | None:intergenic | 45.0% |
| ATGCCAAGTAGCATGGAAGT+AGG | - | chr6_1:19652913-19652932 | Msa0878530:intron | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | + | chr6_1:19652919-19652938 | None:intergenic | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | - | chr6_1:19652919-19652938 | Msa0878530:intron | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | - | chr6_1:19652920-19652939 | Msa0878530:intron | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | - | chr6_1:19652934-19652953 | Msa0878530:intron | 45.0% | |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | - | chr6_1:19652987-19653006 | Msa0878530:intron | 45.0% |
| ! | GGCGTTTTTCCAATGCATGA+AGG | - | chr6_1:19653422-19653441 | Msa0878530:intron | 45.0% |
| ! | TTTTCCAATGCATGAAGGCG+AGG | - | chr6_1:19653427-19653446 | Msa0878530:intron | 45.0% |
| CATTGGAGTTTACGTCCTTC+AGG | + | chr6_1:19653772-19653791 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | - | chr6_1:19653770-19653789 | Msa0878530:CDS | 45.0% | |
| !! | GTAAACTCCAATGGACTGAG+CGG | - | chr6_1:19653779-19653798 | Msa0878530:CDS | 45.0% |
| TGAATTTCCGCTCAGTCCAT+TGG | + | chr6_1:19653789-19653808 | None:intergenic | 45.0% | |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | - | chr6_1:19654166-19654185 | Msa0878530:CDS | 45.0% |
| TGCCAAATCCACTGCCTAAA+GGG | + | chr6_1:19654171-19654190 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | + | chr6_1:19654172-19654191 | None:intergenic | 45.0% | |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | - | chr6_1:19654215-19654234 | Msa0878530:CDS | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | - | chr6_1:19654216-19654235 | Msa0878530:CDS | 45.0% |
| CATGTTACGTGTTGGACCAT+AGG | - | chr6_1:19654468-19654487 | Msa0878530:intron | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | - | chr6_1:19654490-19654509 | Msa0878530:intron | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | + | chr6_1:19654540-19654559 | None:intergenic | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | - | chr6_1:19654544-19654563 | Msa0878530:intron | 45.0% | |
| !! | AGTCCATTTTGAAGGGGTAG+TGG | - | chr6_1:19654656-19654675 | Msa0878530:intron | 45.0% |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | - | chr6_1:19654725-19654744 | Msa0878530:intron | 45.0% |
| AAGTACTTGGAGTTGTGGGA+TGG | - | chr6_1:19654887-19654906 | Msa0878530:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | - | chr6_1:19654900-19654919 | Msa0878530:CDS | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | - | chr6_1:19654901-19654920 | Msa0878530:CDS | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | - | chr6_1:19654902-19654921 | Msa0878530:CDS | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | - | chr6_1:19654931-19654950 | Msa0878530:CDS | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | + | chr6_1:19655086-19655105 | None:intergenic | 45.0% | |
| !! | TATATGGGGGCGTTTGTTTG+AGG | - | chr6_1:19655353-19655372 | Msa0878530:intron | 45.0% |
| !! | GCATTGGTTAAGGGCAGAAT+TGG | + | chr6_1:19655587-19655606 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | - | chr6_1:19655823-19655842 | Msa0878530:CDS | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | - | chr6_1:19655865-19655884 | Msa0878530:CDS | 45.0% |
| TAATCCCTGCTAGACAAACC+AGG | + | chr6_1:19655872-19655891 | None:intergenic | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | + | chr6_1:19656221-19656240 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | + | chr6_1:19656473-19656492 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | - | chr6_1:19656542-19656561 | Msa0878530:CDS | 45.0% | |
| !!! | TAAATTTTATCATTAAAATT+AGG | - | chr6_1:19654412-19654431 | Msa0878530:intron | 5.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | + | chr6_1:19654837-19654856 | None:intergenic | 5.0% |
| TAGGTGGGATGCAAGTAGCT+TGG | - | chr6_1:19651892-19651911 | Msa0878530:three_prime_UTR | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+GGG | - | chr6_1:19651893-19651912 | Msa0878530:three_prime_UTR | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | - | chr6_1:19652084-19652103 | Msa0878530:three_prime_UTR | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | + | chr6_1:19652096-19652115 | None:intergenic | 50.0% | |
| ACCAAAGTGGATGGAGGTCA+TGG | - | chr6_1:19652518-19652537 | Msa0878530:intron | 50.0% | |
| ACCATGACCTCCATCCACTT+TGG | + | chr6_1:19652522-19652541 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | - | chr6_1:19652837-19652856 | Msa0878530:intron | 50.0% | |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | - | chr6_1:19652988-19653007 | Msa0878530:intron | 50.0% |
| GTAGATGAGTTGCGTGTTGC+CGG | - | chr6_1:19653399-19653418 | Msa0878530:intron | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | - | chr6_1:19653400-19653419 | Msa0878530:intron | 50.0% | |
| CATGCATTGGAAAAACGCCC+CGG | + | chr6_1:19653421-19653440 | None:intergenic | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | + | chr6_1:19653434-19653453 | None:intergenic | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | - | chr6_1:19653433-19653452 | Msa0878530:intron | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | - | chr6_1:19653434-19653453 | Msa0878530:intron | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | + | chr6_1:19653823-19653842 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | - | chr6_1:19653822-19653841 | Msa0878530:intron | 50.0% | |
| ! | AGGCAGTGGATTTGGCATTG+TGG | - | chr6_1:19654174-19654193 | Msa0878530:CDS | 50.0% |
| GCGGGGTTTACGCTTATGTT+TGG | - | chr6_1:19654261-19654280 | Msa0878530:intron | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | + | chr6_1:19654326-19654345 | None:intergenic | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | + | chr6_1:19654450-19654469 | None:intergenic | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | + | chr6_1:19654451-19654470 | None:intergenic | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | + | chr6_1:19654463-19654482 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | - | chr6_1:19654460-19654479 | Msa0878530:intron | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | - | chr6_1:19654474-19654493 | Msa0878530:intron | 50.0% | |
| AAATGCCTCAAGGCAGCGTT+TGG | - | chr6_1:19654532-19654551 | Msa0878530:intron | 50.0% | |
| GGGATGGTGAAGCAAAATGG+GGG | - | chr6_1:19654903-19654922 | Msa0878530:CDS | 50.0% | |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | - | chr6_1:19655269-19655288 | Msa0878530:intron | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | - | chr6_1:19655387-19655406 | Msa0878530:intron | 50.0% |
| GCAAAACGTGGGTCAAACGT+GGG | + | chr6_1:19655501-19655520 | None:intergenic | 50.0% | |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | - | chr6_1:19655864-19655883 | Msa0878530:CDS | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | - | chr6_1:19655897-19655916 | Msa0878530:CDS | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | + | chr6_1:19655902-19655921 | None:intergenic | 50.0% |
| ! | ACACCGACTAGAACTCAGGA+AGG | - | chr6_1:19655901-19655920 | Msa0878530:CDS | 50.0% |
| TTCCTGGGAAAGCTAATCCC+AGG | - | chr6_1:19656089-19656108 | Msa0878530:intron | 50.0% | |
| !! | TACCTGGGATTAGCTTTCCC+AGG | + | chr6_1:19656094-19656113 | None:intergenic | 50.0% |
| CATTCCCGGGACTTAGTTGT+AGG | - | chr6_1:19656213-19656232 | Msa0878530:CDS | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | + | chr6_1:19656220-19656239 | None:intergenic | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | - | chr6_1:19656220-19656239 | Msa0878530:CDS | 50.0% | |
| AGATGAGTTGCGTGTTGCCG+GGG | - | chr6_1:19653401-19653420 | Msa0878530:intron | 55.0% | |
| !! | CCAAGACACTTGAGGCGTTG+CGG | - | chr6_1:19653830-19653849 | Msa0878530:intron | 55.0% |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | - | chr6_1:19654220-19654239 | Msa0878530:CDS | 55.0% |
| CAGTGGTCTTCGAACTGGGT+TGG | + | chr6_1:19654446-19654465 | None:intergenic | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | - | chr6_1:19654444-19654463 | Msa0878530:intron | 55.0% | |
| GGCAAAACGTGGGTCAAACG+TGG | + | chr6_1:19655502-19655521 | None:intergenic | 55.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | - | chr6_1:19652336-19652355 | Msa0878530:intron | 60.0% | |
| CCGCAACGCCTCAAGTGTCT+TGG | + | chr6_1:19653833-19653852 | None:intergenic | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | - | chr6_1:19654230-19654249 | Msa0878530:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 19651875 | 19656822 | 19651875 | ID=Msa0878530;Name=Msa0878530 |
| chr6_1 | mRNA | 19651875 | 19656822 | 19651875 | ID=Msa0878530-mRNA-1;Parent=Msa0878530;Name=Msa0878530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.62|0.66|1|1|1|9|241|617 |
| chr6_1 | exon | 19651875 | 19652235 | 19651875 | ID=Msa0878530-mRNA-1:exon:5338;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19653745 | 19653835 | 19653745 | ID=Msa0878530-mRNA-1:exon:5337;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19653928 | 19654043 | 19653928 | ID=Msa0878530-mRNA-1:exon:5336;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19654132 | 19654263 | 19654132 | ID=Msa0878530-mRNA-1:exon:5335;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19654833 | 19654958 | 19654833 | ID=Msa0878530-mRNA-1:exon:5334;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19655047 | 19655136 | 19655047 | ID=Msa0878530-mRNA-1:exon:5333;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19655455 | 19656027 | 19655455 | ID=Msa0878530-mRNA-1:exon:5332;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19656126 | 19656248 | 19656126 | ID=Msa0878530-mRNA-1:exon:5331;Parent=Msa0878530-mRNA-1 |
| chr6_1 | exon | 19656340 | 19656822 | 19656340 | ID=Msa0878530-mRNA-1:exon:5330;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19656340 | 19656822 | 19656340 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19656126 | 19656248 | 19656126 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19655455 | 19656027 | 19655455 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19655047 | 19655136 | 19655047 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19654833 | 19654958 | 19654833 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19654132 | 19654263 | 19654132 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19653928 | 19654043 | 19653928 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19653745 | 19653835 | 19653745 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | CDS | 19652116 | 19652235 | 19652116 | ID=Msa0878530-mRNA-1:cds;Parent=Msa0878530-mRNA-1 |
| chr6_1 | three_prime_UTR | 19651875 | 19652115 | 19651875 | ID=Msa0878530-mRNA-1:three_prime_utr;Parent=Msa0878530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
