Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0954640 | sp|O65278|ULP1B_ARATH | 25.229 | 218 | 140 | 8 | 477 | 688 | 141 | 341 | 2.41e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0954640 | A0A072TKR8 | 63.000 | 400 | 46 | 4 | 1 | 399 | 1 | 299 | 3.58e-156 | 463 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0210730 | Msa0954640 | 0.907471 | 4.891120e-81 | -8.615850e-47 |
| Msa0317780 | Msa0954640 | 0.903129 | 4.772341e-79 | -8.615850e-47 |
| Msa0342760 | Msa0954640 | 0.917441 | 5.291312e-86 | -8.615850e-47 |
| Msa0352050 | Msa0954640 | 0.837657 | 4.568198e-57 | -8.615850e-47 |
| Msa0878530 | Msa0954640 | 0.803069 | 4.156473e-49 | -8.615850e-47 |
| Msa0900920 | Msa0954640 | 0.911951 | 3.398030e-83 | -8.615850e-47 |
| Msa0952380 | Msa0954640 | 0.929569 | 5.754480e-93 | -8.615850e-47 |
| Msa0954640 | Msa1025910 | 0.901033 | 4.030100e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0954640 | MtrunA17_Chr6g0474521 | 69.470 | 321 | 57 | 1 | 42 | 362 | 1 | 280 | 1.07e-151 | 442 |
| Msa0954640 | MtrunA17_Chr1g0162981 | 62.162 | 148 | 52 | 1 | 256 | 399 | 1 | 148 | 6.18e-54 | 182 |
| Msa0954640 | MtrunA17_Chr4g0074621 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 2.59e-53 | 178 |
| Msa0954640 | MtrunA17_Chr1g0175971 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 2.59e-53 | 178 |
| Msa0954640 | MtrunA17_Chr8g0337461 | 86.765 | 68 | 9 | 0 | 1 | 68 | 1 | 68 | 1.28e-33 | 123 |
| Msa0954640 | MtrunA17_Chr7g0265121 | 34.426 | 183 | 113 | 2 | 22 | 198 | 9 | 190 | 8.38e-33 | 125 |
| Msa0954640 | MtrunA17_Chr4g0074611 | 34.426 | 183 | 113 | 2 | 22 | 198 | 9 | 190 | 8.38e-33 | 125 |
| Msa0954640 | MtrunA17_Chr4g0012881 | 25.893 | 224 | 148 | 7 | 31 | 246 | 38 | 251 | 1.06e-20 | 96.7 |
| Msa0954640 | MtrunA17_Chr6g0470871 | 53.448 | 58 | 27 | 0 | 23 | 80 | 16 | 73 | 6.54e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0954640 | AT4G15880.1 | 26.449 | 276 | 165 | 11 | 419 | 688 | 246 | 489 | 1.28e-13 | 74.3 |
| Msa0954640 | AT4G00690.1 | 25.229 | 218 | 140 | 8 | 477 | 688 | 141 | 341 | 2.45e-13 | 72.4 |
Find 178 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 6_3:-55792458 | Msa0954640:CDS |
| GATACAATTATACACATTTC+TGG | 0.180552 | 6_3:-55792363 | Msa0954640:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 6_3:-55792726 | Msa0954640:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 6_3:+55792194 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 6_3:-55790938 | Msa0954640:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 6_3:-55789969 | Msa0954640:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 6_3:-55793079 | Msa0954640:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 6_3:+55792737 | None:intergenic |
| TATATAGATAAAGGGGTATT+AGG | 0.287945 | 6_3:+55787997 | None:intergenic |
| AGAAATACATATATAGATAA+AGG | 0.290515 | 6_3:+55787988 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 6_3:+55792513 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 6_3:-55791812 | Msa0954640:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 6_3:-55789779 | Msa0954640:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 6_3:-55792457 | Msa0954640:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 6_3:-55789931 | Msa0954640:intron |
| TTATCGAAGGTCATATATAA+AGG | 0.331004 | 6_3:-55787929 | Msa0954640:three_prime_UTR |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 6_3:-55792711 | Msa0954640:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 6_3:+55792207 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 6_3:+55790910 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 6_3:-55791125 | Msa0954640:intron |
| TGGTTGCCCAGCAGTATTGC+AGG | 0.352587 | 6_3:-55792343 | Msa0954640:intron |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 6_3:+55792446 | None:intergenic |
| TCTATATATGTATTTCTTTG+AGG | 0.369379 | 6_3:-55787982 | Msa0954640:three_prime_UTR |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 6_3:+55790231 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 6_3:-55791946 | Msa0954640:CDS |
| ATAAAGGGGTATTAGGATAA+AGG | 0.373190 | 6_3:+55788004 | None:intergenic |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 6_3:-55789992 | Msa0954640:CDS |
| GAAATACATATATAGATAAA+GGG | 0.379203 | 6_3:+55787989 | None:intergenic |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 6_3:-55791281 | Msa0954640:CDS |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 6_3:-55792683 | Msa0954640:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 6_3:+55792586 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 6_3:+55788150 | None:intergenic |
| AACACAAAGATTTGCTTTCT+CGG | 0.395053 | 6_3:-55791858 | Msa0954640:CDS |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 6_3:+55791763 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 6_3:-55792016 | Msa0954640:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 6_3:-55789778 | Msa0954640:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 6_3:-55792843 | Msa0954640:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 6_3:-55790147 | Msa0954640:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 6_3:-55790007 | Msa0954640:CDS |
| TTTGTCTAACTTGATTGTGC+TGG | 0.411331 | 6_3:-55788090 | Msa0954640:three_prime_UTR |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 6_3:+55792678 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 6_3:-55788197 | Msa0954640:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 6_3:+55792830 | None:intergenic |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 6_3:-55792733 | Msa0954640:CDS |
| TTCAATACCTGCAATACTGC+TGG | 0.429612 | 6_3:+55792336 | None:intergenic |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 6_3:+55791249 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 6_3:-55791512 | Msa0954640:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 6_3:-55791503 | Msa0954640:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 6_3:-55791434 | Msa0954640:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 6_3:+55792208 | None:intergenic |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 6_3:-55792820 | Msa0954640:CDS |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 6_3:-55789805 | Msa0954640:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 6_3:-55789966 | Msa0954640:CDS |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 6_3:+55792853 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 6_3:-55791800 | Msa0954640:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 6_3:-55791604 | Msa0954640:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 6_3:-55789954 | Msa0954640:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 6_3:+55792901 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 6_3:+55792699 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 6_3:+55790893 | None:intergenic |
| ACACAAAGATTTGCTTTCTC+GGG | 0.459007 | 6_3:-55791857 | Msa0954640:CDS |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 6_3:-55789797 | Msa0954640:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 6_3:-55791709 | Msa0954640:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 6_3:-55791280 | Msa0954640:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 6_3:-55792022 | Msa0954640:intron |
| TATCTACCAACTTATTAGTA+CGG | 0.467587 | 6_3:+55792928 | None:intergenic |
| ATCTACCAACTTATTAGTAC+GGG | 0.467987 | 6_3:+55792929 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+GGG | 0.470670 | 6_3:-55792786 | Msa0954640:CDS |
| TGGGATTTAGAGTAGGCGTT+AGG | 0.472541 | 6_3:-55792767 | Msa0954640:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 6_3:-55789796 | Msa0954640:CDS |
| TAATATTCGTTGGTGTATCA+TGG | 0.485490 | 6_3:-55788037 | Msa0954640:three_prime_UTR |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 6_3:-55792697 | Msa0954640:CDS |
| CATACATTGTCCTCTTCCTA+TGG | 0.495966 | 6_3:+55790195 | None:intergenic |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 6_3:-55791659 | Msa0954640:CDS |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 6_3:-55792803 | Msa0954640:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 6_3:+55791951 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 6_3:+55792160 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 6_3:-55792597 | Msa0954640:CDS |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 6_3:-55791527 | Msa0954640:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 6_3:+55791944 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 6_3:+55789741 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 6_3:-55791538 | Msa0954640:CDS |
| TAGGTGGGATGCAAGTAGCT+TGG | 0.510938 | 6_3:-55792787 | Msa0954640:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 6_3:+55789740 | None:intergenic |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 6_3:-55792834 | Msa0954640:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 6_3:-55789957 | Msa0954640:CDS |
| ATATCCTCATATTATCCTCA+AGG | 0.520468 | 6_3:+55791827 | None:intergenic |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 6_3:-55791537 | Msa0954640:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 6_3:-55791952 | Msa0954640:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 6_3:-55791121 | Msa0954640:CDS |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 6_3:-55788225 | Msa0954640:intron |
| CATGTTATGTGTTGGACCAT+AGG | 0.524779 | 6_3:-55790211 | Msa0954640:CDS |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 6_3:-55791805 | Msa0954640:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.528157 | 6_3:-55792862 | Msa0954640:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 6_3:-55791670 | Msa0954640:CDS |
| AATGCCCCGTACTAATAAGT+TGG | 0.529713 | 6_3:-55792934 | Msa0954640:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 6_3:-55791691 | Msa0954640:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 6_3:+55790849 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 6_3:-55791247 | Msa0954640:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 6_3:-55788124 | Msa0954640:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 6_3:+55792202 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 6_3:-55789748 | Msa0954640:intron |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 6_3:-55792596 | Msa0954640:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 6_3:-55789981 | Msa0954640:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 6_3:-55791891 | Msa0954640:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 6_3:+55790232 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 6_3:+55792951 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 6_3:-55791760 | Msa0954640:CDS |
| CAATCCTTGAGGATAATATG+AGG | 0.554114 | 6_3:-55791831 | Msa0954640:CDS |
| TTCTCGGGTTTCAATCCTTG+AGG | 0.558167 | 6_3:-55791842 | Msa0954640:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 6_3:-55792682 | Msa0954640:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 6_3:-55792802 | Msa0954640:CDS |
| TCAAGATATATATGCCTCGT+TGG | 0.560933 | 6_3:-55790873 | Msa0954640:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 6_3:-55791773 | Msa0954640:CDS |
| GAAGAGGACAATGTATGTGT+TGG | 0.563430 | 6_3:-55790189 | Msa0954640:CDS |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 6_3:-55791801 | Msa0954640:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 6_3:-55791596 | Msa0954640:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 6_3:+55790020 | None:intergenic |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 6_3:-55790235 | Msa0954640:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 6_3:-55791089 | Msa0954640:CDS |
| AAATACATATATAGATAAAG+GGG | 0.575274 | 6_3:+55787990 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 6_3:-55791887 | Msa0954640:CDS |
| TCAATACCTGCAATACTGCT+GGG | 0.583740 | 6_3:+55792337 | None:intergenic |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 6_3:-55791279 | Msa0954640:CDS |
| AGTAGCTTGGGATTTAGAGT+AGG | 0.584499 | 6_3:-55792774 | Msa0954640:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 6_3:+55792179 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 6_3:+55791769 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 6_3:-55791533 | Msa0954640:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 6_3:-55792806 | Msa0954640:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 6_3:-55790909 | Msa0954640:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 6_3:-55792412 | Msa0954640:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 6_3:-55791578 | Msa0954640:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 6_3:-55792610 | Msa0954640:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 6_3:-55792170 | Msa0954640:CDS |
| ATGTGTTGGACCATAGGAAG+AGG | 0.593423 | 6_3:-55790205 | Msa0954640:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 6_3:-55791669 | Msa0954640:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 6_3:+55790236 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 6_3:-55791246 | Msa0954640:CDS |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 6_3:+55788121 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 6_3:-55790925 | Msa0954640:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 6_3:-55792174 | Msa0954640:CDS |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 6_3:-55791635 | Msa0954640:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 6_3:-55792760 | Msa0954640:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 6_3:-55791766 | Msa0954640:CDS |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 6_3:-55791745 | Msa0954640:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 6_3:-55791603 | Msa0954640:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 6_3:-55790849 | Msa0954640:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 6_3:-55791995 | Msa0954640:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 6_3:-55789777 | Msa0954640:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 6_3:-55791692 | Msa0954640:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 6_3:-55790135 | Msa0954640:intron |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 6_3:-55792243 | Msa0954640:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 6_3:+55788209 | None:intergenic |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 6_3:-55792595 | Msa0954640:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 6_3:-55789792 | Msa0954640:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 6_3:-55791577 | Msa0954640:CDS |
| CCACTGGACATGTTATGTGT+TGG | 0.644755 | 6_3:-55790219 | Msa0954640:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 6_3:-55791643 | Msa0954640:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 6_3:+55790142 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 6_3:+55792533 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 6_3:-55790157 | Msa0954640:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 6_3:-55791708 | Msa0954640:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 6_3:-55791695 | Msa0954640:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 6_3:-55792167 | Msa0954640:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 6_3:+55792721 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 6_3:-55791759 | Msa0954640:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 6_3:-55790857 | Msa0954640:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 6_3:-55792218 | Msa0954640:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 6_3:-55792456 | Msa0954640:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 6_3:+55788120 | None:intergenic |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 6_3:+55792858 | None:intergenic |
| CCAACACATAACATGTCCAG+TGG | 0.703499 | 6_3:+55790219 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 6_3:-55790900 | Msa0954640:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 6_3:+55790859 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 6_3:-55788137 | Msa0954640:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 6_3:-55789776 | Msa0954640:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 6_3:-55791719 | Msa0954640:CDS |
| TCTACCAACTTATTAGTACG+GGG | 0.745691 | 6_3:+55792930 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | + | chr6_3:55789768-55789787 | None:intergenic | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | + | chr6_3:55791478-55791497 | None:intergenic | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | + | chr6_3:55791974-55791993 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | - | chr6_3:55792457-55792476 | Msa0954640:CDS | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | - | chr6_3:55792673-55792692 | Msa0954640:CDS | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | - | chr6_3:55792674-55792693 | Msa0954640:CDS | 10.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | + | chr6_3:55789761-55789780 | None:intergenic | 15.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | + | chr6_3:55789810-55789829 | None:intergenic | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | - | chr6_3:55789908-55789927 | Msa0954640:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | - | chr6_3:55790854-55790873 | Msa0954640:CDS | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | - | chr6_3:55792675-55792694 | Msa0954640:CDS | 15.0% |
| !! | AAATACATATATAGATAAAG+GGG | + | chr6_3:55792972-55792991 | None:intergenic | 15.0% |
| !! | GAAATACATATATAGATAAA+GGG | + | chr6_3:55792973-55792992 | None:intergenic | 15.0% |
| !! | AGAAATACATATATAGATAA+AGG | + | chr6_3:55792974-55792993 | None:intergenic | 15.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | + | chr6_3:55788449-55788468 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | - | chr6_3:55788712-55788731 | Msa0954640:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | - | chr6_3:55788713-55788732 | Msa0954640:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | - | chr6_3:55789818-55789837 | Msa0954640:CDS | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | + | chr6_3:55789993-55790012 | None:intergenic | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | + | chr6_3:55789994-55790013 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | + | chr6_3:55789999-55790018 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | - | chr6_3:55790003-55790022 | Msa0954640:CDS | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | + | chr6_3:55790622-55790641 | None:intergenic | 20.0% |
| !! | TGATATATTACTTGTGTATA+AGG | - | chr6_3:55791083-55791102 | Msa0954640:CDS | 20.0% |
| !! | AATAACTCACTAGAATATAT+GGG | - | chr6_3:55791618-55791637 | Msa0954640:CDS | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | - | chr6_3:55791646-55791665 | Msa0954640:CDS | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | + | chr6_3:55791803-55791822 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | + | chr6_3:55791899-55791918 | None:intergenic | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | - | chr6_3:55792014-55792033 | Msa0954640:intron | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | + | chr6_3:55792583-55792602 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | - | chr6_3:55792583-55792602 | Msa0954640:CDS | 20.0% |
| !! | TCTATATATGTATTTCTTTG+AGG | - | chr6_3:55792977-55792996 | Msa0954640:intron | 20.0% |
| !! | TTCGATAACAAAACAAAAAA+AGG | + | chr6_3:55793018-55793037 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTTTGTTATCGA+AGG | - | chr6_3:55793017-55793036 | Msa0954640:intron | 20.0% |
| ! | CAACAGTATTCATTCATTAA+TGG | + | chr6_3:55787979-55787998 | None:intergenic | 25.0% |
| ! | TATCTACCAACTTATTAGTA+CGG | + | chr6_3:55788034-55788053 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | - | chr6_3:55788139-55788158 | Msa0954640:CDS | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | - | chr6_3:55788153-55788172 | Msa0954640:CDS | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | - | chr6_3:55788547-55788566 | Msa0954640:intron | 25.0% |
| !! | TTGTATCATTCTTTTGTTGA+TGG | + | chr6_3:55788583-55788602 | None:intergenic | 25.0% |
| ! | GATACAATTATACACATTTC+TGG | - | chr6_3:55788596-55788615 | Msa0954640:intron | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | - | chr6_3:55788633-55788652 | Msa0954640:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | - | chr6_3:55788634-55788653 | Msa0954640:intron | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | - | chr6_3:55788860-55788879 | Msa0954640:intron | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | + | chr6_3:55788866-55788885 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | - | chr6_3:55788867-55788886 | Msa0954640:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | - | chr6_3:55788868-55788887 | Msa0954640:intron | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | - | chr6_3:55788931-55788950 | Msa0954640:intron | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | + | chr6_3:55788935-55788954 | None:intergenic | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | - | chr6_3:55789147-55789166 | Msa0954640:intron | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | - | chr6_3:55789154-55789173 | Msa0954640:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | - | chr6_3:55789656-55789675 | Msa0954640:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | + | chr6_3:55790291-55790310 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | - | chr6_3:55790335-55790354 | Msa0954640:intron | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | - | chr6_3:55790410-55790429 | Msa0954640:intron | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | + | chr6_3:55790580-55790599 | None:intergenic | 25.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | + | chr6_3:55790581-55790600 | None:intergenic | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | - | chr6_3:55791028-55791047 | Msa0954640:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | + | chr6_3:55791409-55791428 | None:intergenic | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | - | chr6_3:55791429-55791448 | Msa0954640:CDS | 25.0% |
| !!! | CTATTGTTTGAGTTTTTAAC+TGG | - | chr6_3:55791528-55791547 | Msa0954640:CDS | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | + | chr6_3:55791563-55791582 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | - | chr6_3:55791560-55791579 | Msa0954640:CDS | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | - | chr6_3:55791561-55791580 | Msa0954640:CDS | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | - | chr6_3:55791594-55791613 | Msa0954640:CDS | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | - | chr6_3:55791617-55791636 | Msa0954640:CDS | 25.0% |
| !!! | AACTGTCATTATTTTTTCCT+GGG | + | chr6_3:55791755-55791774 | None:intergenic | 25.0% |
| !!! | TAACTGTCATTATTTTTTCC+TGG | + | chr6_3:55791756-55791775 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | + | chr6_3:55791804-55791823 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | - | chr6_3:55791802-55791821 | Msa0954640:CDS | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | + | chr6_3:55791844-55791863 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | + | chr6_3:55791896-55791915 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | - | chr6_3:55791924-55791943 | Msa0954640:CDS | 25.0% |
| !! | GATAATTTTCTTTCTTCCAT+TGG | - | chr6_3:55792038-55792057 | Msa0954640:intron | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | + | chr6_3:55792290-55792309 | None:intergenic | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | + | chr6_3:55792302-55792321 | None:intergenic | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | + | chr6_3:55792303-55792322 | None:intergenic | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | - | chr6_3:55792354-55792373 | Msa0954640:CDS | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | + | chr6_3:55792442-55792461 | None:intergenic | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | + | chr6_3:55792584-55792603 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | - | chr6_3:55792582-55792601 | Msa0954640:CDS | 25.0% |
| !!! | TATATAGATAAAGGGGTATT+AGG | + | chr6_3:55792965-55792984 | None:intergenic | 25.0% |
| ! | TTATCGAAGGTCATATATAA+AGG | - | chr6_3:55793030-55793049 | Msa0954640:intron | 25.0% |
| ATCTACCAACTTATTAGTAC+GGG | + | chr6_3:55788033-55788052 | None:intergenic | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | + | chr6_3:55788109-55788128 | None:intergenic | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | - | chr6_3:55788125-55788144 | Msa0954640:CDS | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | + | chr6_3:55788132-55788151 | None:intergenic | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | + | chr6_3:55788225-55788244 | None:intergenic | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | - | chr6_3:55788226-55788245 | Msa0954640:intron | 30.0% | |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | - | chr6_3:55788830-55788849 | Msa0954640:intron | 30.0% |
| TAACCTTCGCATTTGAAAAA+AGG | + | chr6_3:55788836-55788855 | None:intergenic | 30.0% | |
| ! | TTAATGTGATTAGTTGGTTG+AGG | - | chr6_3:55788937-55788956 | Msa0954640:intron | 30.0% |
| AAGCTTGCACATCAAAAAAA+GGG | + | chr6_3:55789051-55789070 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | + | chr6_3:55789052-55789071 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGCAAGCTTATA+TGG | - | chr6_3:55789054-55789073 | Msa0954640:intron | 30.0% |
| ! | AACACAAAGATTTGCTTTCT+CGG | - | chr6_3:55789101-55789120 | Msa0954640:intron | 30.0% |
| ATATCCTCATATTATCCTCA+AGG | + | chr6_3:55789135-55789154 | None:intergenic | 30.0% | |
| AAAGTGTAGTAAGATTGATG+CGG | - | chr6_3:55789240-55789259 | Msa0954640:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | - | chr6_3:55789290-55789309 | Msa0954640:intron | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | - | chr6_3:55789336-55789355 | Msa0954640:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | - | chr6_3:55789355-55789374 | Msa0954640:intron | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | - | chr6_3:55789356-55789375 | Msa0954640:intron | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | - | chr6_3:55789402-55789421 | Msa0954640:intron | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | - | chr6_3:55789421-55789440 | Msa0954640:intron | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | - | chr6_3:55789422-55789441 | Msa0954640:intron | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | - | chr6_3:55789467-55789486 | Msa0954640:intron | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | - | chr6_3:55789525-55789544 | Msa0954640:intron | 30.0% | |
| !!! | AACTACATTTTTTCATGTCG+CGG | - | chr6_3:55789587-55789606 | Msa0954640:intron | 30.0% |
| CCAGCAATATTAATAACCTA+AGG | + | chr6_3:55789837-55789856 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | - | chr6_3:55789834-55789853 | Msa0954640:intron | 30.0% | |
| !! | TGTCAGATTATTTTTCGGTA+CGG | - | chr6_3:55789913-55789932 | Msa0954640:intron | 30.0% |
| TAAAGGTTGAATACACATCA+CGG | + | chr6_3:55789966-55789985 | None:intergenic | 30.0% | |
| !! | TGAGGTAGTTGATGATTTAA+AGG | - | chr6_3:55790021-55790040 | Msa0954640:CDS | 30.0% |
| AGTCATCATTATGATGTTGT+AGG | - | chr6_3:55790167-55790186 | Msa0954640:CDS | 30.0% | |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | - | chr6_3:55790355-55790374 | Msa0954640:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | - | chr6_3:55790469-55790488 | Msa0954640:intron | 30.0% |
| AACAAAACTCGCAAAATTAG+GGG | + | chr6_3:55790579-55790598 | None:intergenic | 30.0% | |
| ! | GTAGTGGAATTGATGAATAA+AGG | - | chr6_3:55790952-55790971 | Msa0954640:intron | 30.0% |
| AATAAAGGAGCGAACAATAA+AGG | - | chr6_3:55790967-55790986 | Msa0954640:intron | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | - | chr6_3:55790978-55790997 | Msa0954640:intron | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | - | chr6_3:55790990-55791009 | Msa0954640:intron | 30.0% | |
| !! | ACTAACCAATTTTGTTGCTT+TGG | + | chr6_3:55791036-55791055 | None:intergenic | 30.0% |
| ! | AAATTTTGCAGTCATGATTG+TGG | - | chr6_3:55791131-55791150 | Msa0954640:intron | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | - | chr6_3:55791132-55791151 | Msa0954640:intron | 30.0% |
| GGTATATGTTCTTAAGTACT+TGG | - | chr6_3:55791154-55791173 | Msa0954640:intron | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | + | chr6_3:55791222-55791241 | None:intergenic | 30.0% | |
| ! | CAATTAATCATCATTGACTG+CGG | - | chr6_3:55791323-55791342 | Msa0954640:intron | 30.0% |
| GCAATTAGGCTGTATATTTA+GGG | + | chr6_3:55791377-55791396 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | + | chr6_3:55791378-55791397 | None:intergenic | 30.0% | |
| ATTGGATATCTACTGCAATT+AGG | + | chr6_3:55791391-55791410 | None:intergenic | 30.0% | |
| !! | TTGTTTGAGTTTTTAACTGG+AGG | - | chr6_3:55791531-55791550 | Msa0954640:CDS | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | - | chr6_3:55791559-55791578 | Msa0954640:CDS | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | - | chr6_3:55791595-55791614 | Msa0954640:CDS | 30.0% |
| ATATTCTAGTGAGTTATTCC+CGG | + | chr6_3:55791616-55791635 | None:intergenic | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | - | chr6_3:55791689-55791708 | Msa0954640:CDS | 30.0% | |
| GGAACAAAAAAAATATGCCT+AGG | - | chr6_3:55791718-55791737 | Msa0954640:CDS | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | + | chr6_3:55791792-55791811 | None:intergenic | 30.0% | |
| TTTATTCCTGTCAAATAGGA+TGG | - | chr6_3:55791806-55791825 | Msa0954640:CDS | 30.0% | |
| TTATTCCTGTCAAATAGGAT+GGG | - | chr6_3:55791807-55791826 | Msa0954640:CDS | 30.0% | |
| ! | GATTTTCACAGAAATTTACC+TGG | + | chr6_3:55791845-55791864 | None:intergenic | 30.0% |
| ATAGAAGTCCAAACTCAATT+GGG | + | chr6_3:55792071-55792090 | None:intergenic | 30.0% | |
| !!! | GACTTCTATGCATTGATTTT+GGG | - | chr6_3:55792082-55792101 | Msa0954640:intron | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | - | chr6_3:55792324-55792343 | Msa0954640:intron | 30.0% |
| ! | AATGTTGGAATCTTATTTCC+AGG | + | chr6_3:55792345-55792364 | None:intergenic | 30.0% |
| GATTCCAACATTTATATTCC+TGG | - | chr6_3:55792353-55792372 | Msa0954640:CDS | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | + | chr6_3:55792360-55792379 | None:intergenic | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | + | chr6_3:55792389-55792408 | None:intergenic | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | + | chr6_3:55792390-55792409 | None:intergenic | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | + | chr6_3:55792425-55792444 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | - | chr6_3:55792542-55792561 | Msa0954640:CDS | 30.0% | |
| !! | TTTATTTTCAAACGAGGGTT+GGG | + | chr6_3:55792578-55792597 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | + | chr6_3:55792579-55792598 | None:intergenic | 30.0% |
| TGTGTAAGTTATTTGTTTCC+AGG | - | chr6_3:55792607-55792626 | Msa0954640:CDS | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | + | chr6_3:55792628-55792647 | None:intergenic | 30.0% | |
| TTATACACAGTAACACACAT+TGG | - | chr6_3:55792637-55792656 | Msa0954640:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | + | chr6_3:55792721-55792740 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | - | chr6_3:55792720-55792739 | Msa0954640:CDS | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | + | chr6_3:55792812-55792831 | None:intergenic | 30.0% | |
| ! | GCGTTTTGTATAATATTCGT+TGG | - | chr6_3:55792912-55792931 | Msa0954640:CDS | 30.0% |
| TAATATTCGTTGGTGTATCA+TGG | - | chr6_3:55792922-55792941 | Msa0954640:CDS | 30.0% | |
| !! | ATAAAGGGGTATTAGGATAA+AGG | + | chr6_3:55792958-55792977 | None:intergenic | 30.0% |
| TGAGGGAAAACAAACGAAAA+AGG | - | chr6_3:55787880-55787899 | Msa0954640:three_prime_UTR | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | - | chr6_3:55787881-55787900 | Msa0954640:three_prime_UTR | 35.0% | |
| TCTACCAACTTATTAGTACG+GGG | + | chr6_3:55788032-55788051 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | + | chr6_3:55788104-55788123 | None:intergenic | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | - | chr6_3:55788116-55788135 | Msa0954640:exon | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | - | chr6_3:55788156-55788175 | Msa0954640:CDS | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | - | chr6_3:55788157-55788176 | Msa0954640:CDS | 35.0% | |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | - | chr6_3:55788262-55788281 | Msa0954640:intron | 35.0% |
| TTTACCGGAAACTAGTGATA+GGG | - | chr6_3:55788277-55788296 | Msa0954640:intron | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | - | chr6_3:55788349-55788368 | Msa0954640:intron | 35.0% | |
| CGGAAAATATAACACACACA+AGG | + | chr6_3:55788429-55788448 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | - | chr6_3:55788501-55788520 | Msa0954640:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | - | chr6_3:55788502-55788521 | Msa0954640:intron | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | - | chr6_3:55788503-55788522 | Msa0954640:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | - | chr6_3:55788716-55788735 | Msa0954640:intron | 35.0% | |
| ! | GTTTTCCACGCATTAACAAT+TGG | - | chr6_3:55788775-55788794 | Msa0954640:intron | 35.0% |
| CATTAACAATTGGACCAAAG+TGG | - | chr6_3:55788785-55788804 | Msa0954640:intron | 35.0% | |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | + | chr6_3:55788971-55788990 | None:intergenic | 35.0% |
| ACCAACTTGAGAATGGTTAA+CGG | + | chr6_3:55789011-55789030 | None:intergenic | 35.0% | |
| !! | AACCATTCTCAAGTTGGTAT+TGG | - | chr6_3:55789013-55789032 | Msa0954640:intron | 35.0% |
| CTTATATGGCTGAACATCAA+AGG | - | chr6_3:55789068-55789087 | Msa0954640:intron | 35.0% | |
| ! | ACACAAAGATTTGCTTTCTC+GGG | - | chr6_3:55789102-55789121 | Msa0954640:intron | 35.0% |
| CAATCCTTGAGGATAATATG+AGG | - | chr6_3:55789128-55789147 | Msa0954640:intron | 35.0% | |
| AAGATTGATGCGGATAATGA+TGG | - | chr6_3:55789250-55789269 | Msa0954640:intron | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | - | chr6_3:55789251-55789270 | Msa0954640:intron | 35.0% | |
| !! | TAATGATGGGTTGAAAAGTG+AGG | - | chr6_3:55789264-55789283 | Msa0954640:intron | 35.0% |
| GGAAAAGCAGAAGAAAATGA+TGG | - | chr6_3:55789289-55789308 | Msa0954640:intron | 35.0% | |
| ! | AGAAAATGATGGGATGAAGT+TGG | - | chr6_3:55789300-55789319 | Msa0954640:intron | 35.0% |
| AAGTTGGATGATGAAGATGT+TGG | - | chr6_3:55789316-55789335 | Msa0954640:intron | 35.0% | |
| !! | AGAAAATGATGATGGGATGA+AGG | - | chr6_3:55789363-55789382 | Msa0954640:intron | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | - | chr6_3:55789382-55789401 | Msa0954640:intron | 35.0% |
| AGAAGATAAAGACAATGGGA+TGG | - | chr6_3:55789426-55789445 | Msa0954640:intron | 35.0% | |
| ! | TGATGATGATATGGCTGAAA+AGG | - | chr6_3:55789456-55789475 | Msa0954640:intron | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | - | chr6_3:55789588-55789607 | Msa0954640:intron | 35.0% |
| AGGTTATTAATATTGCTGGC+AGG | - | chr6_3:55789838-55789857 | Msa0954640:intron | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | - | chr6_3:55789870-55789889 | Msa0954640:intron | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | + | chr6_3:55789983-55790002 | None:intergenic | 35.0% | |
| TCAAGATATATATGCCTCGT+TGG | - | chr6_3:55790086-55790105 | Msa0954640:intron | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | - | chr6_3:55790187-55790206 | Msa0954640:CDS | 35.0% | |
| ! | TTGTCTAGAATGTTGATGAG+TGG | - | chr6_3:55790216-55790235 | Msa0954640:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | - | chr6_3:55790217-55790236 | Msa0954640:CDS | 35.0% |
| CTCTACCTAAAATTCCCTTT+AGG | - | chr6_3:55790434-55790453 | Msa0954640:intron | 35.0% | |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | - | chr6_3:55790468-55790487 | Msa0954640:intron | 35.0% |
| GGGTTTGTGTTGTATTAGTT+CGG | - | chr6_3:55790489-55790508 | Msa0954640:intron | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | - | chr6_3:55790492-55790511 | Msa0954640:intron | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | - | chr6_3:55790493-55790512 | Msa0954640:intron | 35.0% | |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | - | chr6_3:55790522-55790541 | Msa0954640:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | - | chr6_3:55790523-55790542 | Msa0954640:intron | 35.0% |
| GCAAAATTAGGGGTTACAAT+AGG | + | chr6_3:55790569-55790588 | None:intergenic | 35.0% | |
| !!! | CGAATTTGTTTTATGCAACG+TGG | - | chr6_3:55790664-55790683 | Msa0954640:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | - | chr6_3:55790928-55790947 | Msa0954640:CDS | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | - | chr6_3:55790929-55790948 | Msa0954640:CDS | 35.0% |
| TATGTTGGAATCTTCTTTGG+AGG | - | chr6_3:55790993-55791012 | Msa0954640:intron | 35.0% | |
| ! | ATTTTGCAGTCATGATTGTG+GGG | - | chr6_3:55791133-55791152 | Msa0954640:intron | 35.0% |
| TTCTTAAGTACTTGGAGTTG+TGG | - | chr6_3:55791162-55791181 | Msa0954640:intron | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | - | chr6_3:55791163-55791182 | Msa0954640:intron | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | + | chr6_3:55791221-55791240 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | - | chr6_3:55791432-55791451 | Msa0954640:CDS | 35.0% | |
| TATTCTAGTGAGTTATTCCC+GGG | + | chr6_3:55791615-55791634 | None:intergenic | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | - | chr6_3:55791654-55791673 | Msa0954640:CDS | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | + | chr6_3:55791674-55791693 | None:intergenic | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | + | chr6_3:55791675-55791694 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | - | chr6_3:55791696-55791715 | Msa0954640:CDS | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | - | chr6_3:55791697-55791716 | Msa0954640:CDS | 35.0% | |
| CCTGGGTATAATTTATTCCT+AGG | + | chr6_3:55791738-55791757 | None:intergenic | 35.0% | |
| CCTAGGAATAAATTATACCC+AGG | - | chr6_3:55791735-55791754 | Msa0954640:CDS | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | + | chr6_3:55791793-55791812 | None:intergenic | 35.0% | |
| !! | AGGTGATAAGCATTGGTTAA+GGG | + | chr6_3:55791876-55791895 | None:intergenic | 35.0% |
| ATATAGGAGGTGATAAGCAT+TGG | + | chr6_3:55791883-55791902 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | + | chr6_3:55792057-55792076 | None:intergenic | 35.0% | |
| ! | GAATTTTCCCCAATTGAGTT+TGG | - | chr6_3:55792060-55792079 | Msa0954640:intron | 35.0% |
| TAGAAGTCCAAACTCAATTG+GGG | + | chr6_3:55792070-55792089 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | + | chr6_3:55792072-55792091 | None:intergenic | 35.0% | |
| !!! | GGACTTCTATGCATTGATTT+TGG | - | chr6_3:55792081-55792100 | Msa0954640:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | - | chr6_3:55792089-55792108 | Msa0954640:intron | 35.0% |
| TTACACATCCCTTTCCATAT+TGG | + | chr6_3:55792115-55792134 | None:intergenic | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | - | chr6_3:55792131-55792150 | Msa0954640:CDS | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | - | chr6_3:55792227-55792246 | Msa0954640:CDS | 35.0% | |
| !! | AAATGTCGATGGTATTGACA+GGG | - | chr6_3:55792238-55792257 | Msa0954640:intron | 35.0% |
| TCATGCCATAAAAAATTCCC+AGG | - | chr6_3:55792282-55792301 | Msa0954640:intron | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | + | chr6_3:55792426-55792445 | None:intergenic | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | - | chr6_3:55792427-55792446 | Msa0954640:CDS | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | - | chr6_3:55792428-55792447 | Msa0954640:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | - | chr6_3:55792479-55792498 | Msa0954640:CDS | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | - | chr6_3:55792480-55792499 | Msa0954640:CDS | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | - | chr6_3:55792543-55792562 | Msa0954640:CDS | 35.0% | |
| ! | TTATTTTCAAACGAGGGTTG+GGG | + | chr6_3:55792577-55792596 | None:intergenic | 35.0% |
| TAACTGCATTTACTTACAGG+AGG | - | chr6_3:55792723-55792742 | Msa0954640:CDS | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | + | chr6_3:55792842-55792861 | None:intergenic | 35.0% | |
| TTTGTCTAACTTGATTGTGC+TGG | - | chr6_3:55792869-55792888 | Msa0954640:CDS | 35.0% | |
| CGAAAAAGGGATTGTGTTGT+TGG | - | chr6_3:55787894-55787913 | Msa0954640:three_prime_UTR | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | + | chr6_3:55788011-55788030 | None:intergenic | 40.0% | |
| AATGCCCCGTACTAATAAGT+TGG | - | chr6_3:55788025-55788044 | Msa0954640:three_prime_UTR | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | + | chr6_3:55788061-55788080 | None:intergenic | 40.0% | |
| ! | AGTAGCTTGGGATTTAGAGT+AGG | - | chr6_3:55788185-55788204 | Msa0954640:CDS | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | - | chr6_3:55788233-55788252 | Msa0954640:intron | 40.0% |
| GCAAACCTAAAGCCAAACAA+AGG | + | chr6_3:55788241-55788260 | None:intergenic | 40.0% | |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | - | chr6_3:55788248-55788267 | Msa0954640:intron | 40.0% |
| GGTAAACACTCTCCTACAAT+AGG | + | chr6_3:55788263-55788282 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | - | chr6_3:55788276-55788295 | Msa0954640:intron | 40.0% | |
| ! | CTAACCCTATCACTAGTTTC+CGG | + | chr6_3:55788284-55788303 | None:intergenic | 40.0% |
| AACAGCAACACCCCAATTAT+AGG | + | chr6_3:55788516-55788535 | None:intergenic | 40.0% | |
| TCAATACCTGCAATACTGCT+GGG | + | chr6_3:55788625-55788644 | None:intergenic | 40.0% | |
| TTCAATACCTGCAATACTGC+TGG | + | chr6_3:55788626-55788645 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | - | chr6_3:55788741-55788760 | Msa0954640:intron | 40.0% | |
| ! | CTTAATTGGACCACTGGTTA+GGG | + | chr6_3:55788754-55788773 | None:intergenic | 40.0% |
| AAAACGCTTAATTGGACCAC+TGG | + | chr6_3:55788760-55788779 | None:intergenic | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | + | chr6_3:55788768-55788787 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | + | chr6_3:55788783-55788802 | None:intergenic | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | - | chr6_3:55788789-55788808 | Msa0954640:intron | 40.0% | |
| ! | TGATTAGTTGGTTGAGGACT+TGG | - | chr6_3:55788943-55788962 | Msa0954640:intron | 40.0% |
| CTCCAATACCAACTTGAGAA+TGG | + | chr6_3:55789018-55789037 | None:intergenic | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | - | chr6_3:55789072-55789091 | Msa0954640:intron | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | - | chr6_3:55789158-55789177 | Msa0954640:intron | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | - | chr6_3:55789159-55789178 | Msa0954640:intron | 40.0% | |
| ! | TGATGAAGATGTTGGTGAAG+AGG | - | chr6_3:55789324-55789343 | Msa0954640:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | - | chr6_3:55789381-55789400 | Msa0954640:intron | 40.0% |
| TAAAGACAATGGGATGGAGT+TGG | - | chr6_3:55789432-55789451 | Msa0954640:intron | 40.0% | |
| ! | GGAGTTGGATGATGATGATA+TGG | - | chr6_3:55789447-55789466 | Msa0954640:intron | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | - | chr6_3:55789701-55789720 | Msa0954640:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | - | chr6_3:55790034-55790053 | Msa0954640:intron | 40.0% |
| AAGAAAACAGGCAGTGATGA+AGG | + | chr6_3:55790279-55790298 | None:intergenic | 40.0% | |
| ! | CACTGCCTAAAGGGAATTTT+AGG | + | chr6_3:55790442-55790461 | None:intergenic | 40.0% |
| CTAAAATTCCCTTTAGGCAG+TGG | - | chr6_3:55790440-55790459 | Msa0954640:intron | 40.0% | |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | - | chr6_3:55790494-55790513 | Msa0954640:intron | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | - | chr6_3:55790524-55790543 | Msa0954640:intron | 40.0% |
| CATGTTATGTGTTGGACCAT+AGG | - | chr6_3:55790748-55790767 | Msa0954640:intron | 40.0% | |
| CATACATTGTCCTCTTCCTA+TGG | + | chr6_3:55790767-55790786 | None:intergenic | 40.0% | |
| GAAGAGGACAATGTATGTGT+TGG | - | chr6_3:55790770-55790789 | Msa0954640:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | - | chr6_3:55790802-55790821 | Msa0954640:intron | 40.0% | |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | - | chr6_3:55790930-55790949 | Msa0954640:CDS | 40.0% |
| ATTCCACTACCCCTTCAAAA+CGG | + | chr6_3:55790942-55790961 | None:intergenic | 40.0% | |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | - | chr6_3:55791002-55791021 | Msa0954640:intron | 40.0% |
| GCTGTATATTTAGGGAATGC+GGG | + | chr6_3:55791369-55791388 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | + | chr6_3:55791370-55791389 | None:intergenic | 40.0% | |
| TATATGGGTGCGTTTGTTTG+AGG | - | chr6_3:55791633-55791652 | Msa0954640:CDS | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | - | chr6_3:55791663-55791682 | Msa0954640:CDS | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | + | chr6_3:55791704-55791723 | None:intergenic | 40.0% | |
| ACTTTCCCATCCTATTTGAC+AGG | + | chr6_3:55791815-55791834 | None:intergenic | 40.0% | |
| !!! | GATGGGAAAGTTTTATTCCC+AGG | - | chr6_3:55791824-55791843 | Msa0954640:CDS | 40.0% |
| !! | GAGGTGATAAGCATTGGTTA+AGG | + | chr6_3:55791877-55791896 | None:intergenic | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | - | chr6_3:55792098-55792117 | Msa0954640:intron | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | - | chr6_3:55792104-55792123 | Msa0954640:intron | 40.0% |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | + | chr6_3:55792187-55792206 | None:intergenic | 40.0% |
| CTCAGGAAGGATTAGAGTTT+AGG | - | chr6_3:55792194-55792213 | Msa0954640:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | - | chr6_3:55792209-55792228 | Msa0954640:CDS | 40.0% | |
| !! | GAAATGTCGATGGTATTGAC+AGG | - | chr6_3:55792237-55792256 | Msa0954640:intron | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | - | chr6_3:55792239-55792258 | Msa0954640:intron | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | + | chr6_3:55792409-55792428 | None:intergenic | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | + | chr6_3:55792410-55792429 | None:intergenic | 40.0% |
| AACAAACGCACCCTAAATGT+TGG | - | chr6_3:55792412-55792431 | Msa0954640:CDS | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | - | chr6_3:55792413-55792432 | Msa0954640:CDS | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | + | chr6_3:55792556-55792575 | None:intergenic | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | - | chr6_3:55792734-55792753 | Msa0954640:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | - | chr6_3:55792762-55792781 | Msa0954640:CDS | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | - | chr6_3:55792835-55792854 | Msa0954640:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | + | chr6_3:55792841-55792860 | None:intergenic | 40.0% | |
| AACTCCGTTCCGATATCTTG+TGG | - | chr6_3:55788097-55788116 | Msa0954640:three_prime_UTR | 45.0% | |
| ! | TGGGATTTAGAGTAGGCGTT+AGG | - | chr6_3:55788192-55788211 | Msa0954640:CDS | 45.0% |
| AAGCTGAAGGTCCTTCAAGA+AGG | - | chr6_3:55788362-55788381 | Msa0954640:intron | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | - | chr6_3:55788363-55788382 | Msa0954640:intron | 45.0% | |
| ! | GCTTAATTGGACCACTGGTT+AGG | + | chr6_3:55788755-55788774 | None:intergenic | 45.0% |
| AATTGGACCAAAGTGGATGG+AGG | - | chr6_3:55788792-55788811 | Msa0954640:intron | 45.0% | |
| AACATGACCTCCATCCACTT+TGG | + | chr6_3:55788802-55788821 | None:intergenic | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | - | chr6_3:55788964-55788983 | Msa0954640:intron | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | - | chr6_3:55789007-55789026 | Msa0954640:intron | 45.0% | |
| TTCTCGGGTTTCAATCCTTG+AGG | - | chr6_3:55789117-55789136 | Msa0954640:intron | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | - | chr6_3:55789186-55789205 | Msa0954640:intron | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | + | chr6_3:55789193-55789212 | None:intergenic | 45.0% |
| ATGCCAAGTAGCATGGAAGT+AGG | - | chr6_3:55789193-55789212 | Msa0954640:intron | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | + | chr6_3:55789199-55789218 | None:intergenic | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | - | chr6_3:55789199-55789218 | Msa0954640:intron | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | - | chr6_3:55789200-55789219 | Msa0954640:intron | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | - | chr6_3:55789214-55789233 | Msa0954640:intron | 45.0% | |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | - | chr6_3:55789267-55789286 | Msa0954640:intron | 45.0% |
| CATGCATTGGAAAAACTCCC+CGG | + | chr6_3:55789700-55789719 | None:intergenic | 45.0% | |
| ! | TTTTCCAATGCATGAAGGCG+AGG | - | chr6_3:55789706-55789725 | Msa0954640:intron | 45.0% |
| CATTGGAGTTTACGTCCTTC+AGG | + | chr6_3:55790052-55790071 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | - | chr6_3:55790050-55790069 | Msa0954640:intron | 45.0% | |
| !! | GTAAACTCCAATGGACTGAG+CGG | - | chr6_3:55790059-55790078 | Msa0954640:intron | 45.0% |
| TGAATTTCCGCTCAGTCCAT+TGG | + | chr6_3:55790069-55790088 | None:intergenic | 45.0% | |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | - | chr6_3:55790446-55790465 | Msa0954640:intron | 45.0% |
| TGCCAAATCCACTGCCTAAA+GGG | + | chr6_3:55790451-55790470 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | + | chr6_3:55790452-55790471 | None:intergenic | 45.0% | |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | - | chr6_3:55790495-55790514 | Msa0954640:intron | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | - | chr6_3:55790496-55790515 | Msa0954640:intron | 45.0% |
| CCAACACATAACATGTCCAG+TGG | + | chr6_3:55790743-55790762 | None:intergenic | 45.0% | |
| CCACTGGACATGTTATGTGT+TGG | - | chr6_3:55790740-55790759 | Msa0954640:intron | 45.0% | |
| ATGTGTTGGACCATAGGAAG+AGG | - | chr6_3:55790754-55790773 | Msa0954640:intron | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | + | chr6_3:55790820-55790839 | None:intergenic | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | - | chr6_3:55790824-55790843 | Msa0954640:intron | 45.0% | |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | - | chr6_3:55791005-55791024 | Msa0954640:intron | 45.0% |
| AAGTACTTGGAGTTGTGGGA+TGG | - | chr6_3:55791167-55791186 | Msa0954640:intron | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | - | chr6_3:55791180-55791199 | Msa0954640:intron | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | - | chr6_3:55791181-55791200 | Msa0954640:intron | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | - | chr6_3:55791182-55791201 | Msa0954640:intron | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | - | chr6_3:55791211-55791230 | Msa0954640:intron | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | + | chr6_3:55791366-55791385 | None:intergenic | 45.0% | |
| !! | GCATTGGTTAAGGGCAGAAT+TGG | + | chr6_3:55791867-55791886 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | - | chr6_3:55792103-55792122 | Msa0954640:intron | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | - | chr6_3:55792145-55792164 | Msa0954640:CDS | 45.0% |
| TAATCCCTGCTAGACAAACC+AGG | + | chr6_3:55792152-55792171 | None:intergenic | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | + | chr6_3:55792501-55792520 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | + | chr6_3:55792753-55792772 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | - | chr6_3:55792822-55792841 | Msa0954640:CDS | 45.0% | |
| !!! | TAAATTTTATCATTAAAATT+AGG | - | chr6_3:55790692-55790711 | Msa0954640:intron | 5.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | + | chr6_3:55791117-55791136 | None:intergenic | 5.0% |
| TAGGTGGGATGCAAGTAGCT+TGG | - | chr6_3:55788172-55788191 | Msa0954640:CDS | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+GGG | - | chr6_3:55788173-55788192 | Msa0954640:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | - | chr6_3:55788199-55788218 | Msa0954640:CDS | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | - | chr6_3:55788364-55788383 | Msa0954640:intron | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | + | chr6_3:55788376-55788395 | None:intergenic | 50.0% | |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | - | chr6_3:55789268-55789287 | Msa0954640:intron | 50.0% |
| GTAGATGAGTTGCGTGTTGC+CGG | - | chr6_3:55789678-55789697 | Msa0954640:intron | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | - | chr6_3:55789679-55789698 | Msa0954640:intron | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | + | chr6_3:55789713-55789732 | None:intergenic | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | - | chr6_3:55789712-55789731 | Msa0954640:intron | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | - | chr6_3:55789713-55789732 | Msa0954640:intron | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | + | chr6_3:55790103-55790122 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | - | chr6_3:55790102-55790121 | Msa0954640:intron | 50.0% | |
| ! | AGGCAGTGGATTTGGCATTG+TGG | - | chr6_3:55790454-55790473 | Msa0954640:intron | 50.0% |
| GCGGGGTTTACGCTTATGTT+TGG | - | chr6_3:55790541-55790560 | Msa0954640:intron | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | + | chr6_3:55790606-55790625 | None:intergenic | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | + | chr6_3:55790730-55790749 | None:intergenic | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | + | chr6_3:55790731-55790750 | None:intergenic | 50.0% | |
| AAATGCCTCAAGGCAGCGTT+TGG | - | chr6_3:55790812-55790831 | Msa0954640:intron | 50.0% | |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | - | chr6_3:55790936-55790955 | Msa0954640:CDS | 50.0% |
| GGGATGGTGAAGCAAAATGG+GGG | - | chr6_3:55791183-55791202 | Msa0954640:intron | 50.0% | |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | - | chr6_3:55791549-55791568 | Msa0954640:CDS | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | - | chr6_3:55791667-55791686 | Msa0954640:CDS | 50.0% |
| GCAAAACGTGGGTCAAACGT+CGG | + | chr6_3:55791781-55791800 | None:intergenic | 50.0% | |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | - | chr6_3:55792144-55792163 | Msa0954640:CDS | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | - | chr6_3:55792177-55792196 | Msa0954640:CDS | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | + | chr6_3:55792182-55792201 | None:intergenic | 50.0% |
| ! | ACACCGACTAGAACTCAGGA+AGG | - | chr6_3:55792181-55792200 | Msa0954640:CDS | 50.0% |
| TTCCTGGGAAAGCTAATCCC+AGG | - | chr6_3:55792369-55792388 | Msa0954640:CDS | 50.0% | |
| !! | TACCTGGGATTAGCTTTCCC+AGG | + | chr6_3:55792374-55792393 | None:intergenic | 50.0% |
| CATTCCCGGGACTTAGTTGT+AGG | - | chr6_3:55792493-55792512 | Msa0954640:CDS | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | + | chr6_3:55792500-55792519 | None:intergenic | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | - | chr6_3:55792500-55792519 | Msa0954640:CDS | 50.0% | |
| TGGTTGCCCAGCAGTATTGC+AGG | - | chr6_3:55788616-55788635 | Msa0954640:intron | 55.0% | |
| AGATGAGTTGCGTGTTGCCG+GGG | - | chr6_3:55789680-55789699 | Msa0954640:intron | 55.0% | |
| !! | CCAAGACACTTGAGGCGTTG+CGG | - | chr6_3:55790110-55790129 | Msa0954640:intron | 55.0% |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | - | chr6_3:55790500-55790519 | Msa0954640:intron | 55.0% |
| CAGTGGTCTTCGAACTGGGT+TGG | + | chr6_3:55790726-55790745 | None:intergenic | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | - | chr6_3:55790724-55790743 | Msa0954640:intron | 55.0% | |
| CCGCAACGCCTCAAGTGTCT+TGG | + | chr6_3:55790113-55790132 | None:intergenic | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | - | chr6_3:55790510-55790529 | Msa0954640:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 55787879 | 55793102 | 55787879 | ID=Msa0954640;Name=Msa0954640 |
| chr6_3 | mRNA | 55787879 | 55793102 | 55787879 | ID=Msa0954640-mRNA-1;Parent=Msa0954640;Name=Msa0954640-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.8|0.63|1|1|1|11|241|718 |
| chr6_3 | exon | 55787879 | 55788239 | 55787879 | ID=Msa0954640-mRNA-1:exon:11437;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55789749 | 55789839 | 55789749 | ID=Msa0954640-mRNA-1:exon:11436;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55789932 | 55790047 | 55789932 | ID=Msa0954640-mRNA-1:exon:11435;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55790136 | 55790267 | 55790136 | ID=Msa0954640-mRNA-1:exon:11434;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55790837 | 55790962 | 55790837 | ID=Msa0954640-mRNA-1:exon:11433;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55791052 | 55791141 | 55791052 | ID=Msa0954640-mRNA-1:exon:11432;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55791235 | 55791316 | 55791235 | ID=Msa0954640-mRNA-1:exon:11431;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55791424 | 55792031 | 55791424 | ID=Msa0954640-mRNA-1:exon:11430;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55792130 | 55792252 | 55792130 | ID=Msa0954640-mRNA-1:exon:11429;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55792344 | 55792973 | 55792344 | ID=Msa0954640-mRNA-1:exon:11428;Parent=Msa0954640-mRNA-1 |
| chr6_3 | exon | 55793064 | 55793102 | 55793064 | ID=Msa0954640-mRNA-1:exon:11427;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55793064 | 55793102 | 55793064 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55792344 | 55792973 | 55792344 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55792130 | 55792252 | 55792130 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55791424 | 55792031 | 55791424 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55791235 | 55791316 | 55791235 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55791052 | 55791141 | 55791052 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55790837 | 55790962 | 55790837 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55790136 | 55790267 | 55790136 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55789932 | 55790047 | 55789932 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55789749 | 55789839 | 55789749 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | CDS | 55788120 | 55788239 | 55788120 | ID=Msa0954640-mRNA-1:cds;Parent=Msa0954640-mRNA-1 |
| chr6_3 | three_prime_UTR | 55787879 | 55788119 | 55787879 | ID=Msa0954640-mRNA-1:three_prime_utr;Parent=Msa0954640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
