Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0892230 | XP_003620731.1 | 93.028 | 459 | 19 | 2 | 1 | 446 | 1 | 459 | 0.0 | 878 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0892230 | sp|P54873|HMCS_ARATH | 73.171 | 451 | 106 | 3 | 5 | 440 | 1 | 451 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0892230 | G7KQF5 | 93.028 | 459 | 19 | 2 | 1 | 446 | 1 | 459 | 0.0 | 878 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0769390 | Msa0892230 | 0.812215 | 4.742032e-51 | -8.615850e-47 |
| Msa0789690 | Msa0892230 | 0.809369 | 1.957805e-50 | -8.615850e-47 |
| Msa0832370 | Msa0892230 | 0.803727 | 3.036010e-49 | -8.615850e-47 |
| Msa0226250 | Msa0892230 | 0.822310 | 2.537009e-53 | -8.615850e-47 |
| Msa0331920 | Msa0892230 | 0.802675 | 5.012285e-49 | -8.615850e-47 |
| Msa0548280 | Msa0892230 | -0.814320 | 1.635936e-51 | -8.615850e-47 |
| Msa0564510 | Msa0892230 | 0.816822 | 4.534817e-52 | -8.615850e-47 |
| Msa0892230 | Msa0992350 | 0.881706 | 1.920694e-70 | -8.615850e-47 |
| Msa0892230 | Msa1069310 | 0.815431 | 9.278013e-52 | -8.615850e-47 |
| Msa0892230 | Msa1075220 | -0.806715 | 7.189241e-50 | -8.615850e-47 |
| Msa0892230 | Msa1083410 | 0.855856 | 4.763819e-62 | -8.615850e-47 |
| Msa0892230 | Msa1109520 | 0.810324 | 1.219930e-50 | -8.615850e-47 |
| Msa0892230 | Msa1128160 | 0.826200 | 3.091373e-54 | -8.615850e-47 |
| Msa0892230 | Msa1160670 | 0.803080 | 4.135473e-49 | -8.615850e-47 |
| Msa0892230 | Msa1165360 | 0.824230 | 9.034334e-54 | -8.615850e-47 |
| Msa0892230 | Msa1466810 | 0.824004 | 1.020498e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0892230 | MtrunA17_Chr6g0474311 | 93.028 | 459 | 19 | 2 | 1 | 446 | 1 | 459 | 0.0 | 878 |
| Msa0892230 | MtrunA17_Chr5g0398151 | 74.505 | 455 | 103 | 2 | 1 | 442 | 1 | 455 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0892230 | AT4G11820.2 | 73.171 | 451 | 106 | 3 | 5 | 440 | 1 | 451 | 0.0 | 687 |
| Msa0892230 | AT4G11820.3 | 73.604 | 394 | 91 | 2 | 60 | 440 | 3 | 396 | 0.0 | 613 |
| Msa0892230 | AT4G11820.1 | 73.604 | 394 | 91 | 2 | 60 | 440 | 3 | 396 | 0.0 | 613 |
Find 98 sgRNAs with CRISPR-Local
Find 654 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTATTTATTTATTTATT+TGG | 0.084871 | 6_1:-71222561 | None:intergenic |
| CATATGATTACCTTGTTATA+TGG | 0.231142 | 6_1:-71229342 | None:intergenic |
| TTGCATGAGGAAGGTCTTAA+TGG | 0.243933 | 6_1:-71224212 | None:intergenic |
| CTTCTGTATTTGATGCCTTA+TGG | 0.251567 | 6_1:+71232086 | Msa0892230:three_prime_UTR |
| TAAATGTGCAGGTAGGTAAA+AGG | 0.256834 | 6_1:+71231421 | Msa0892230:intron |
| CACAATGTTCGACAAGTTAA+AGG | 0.257667 | 6_1:-71231517 | None:intergenic |
| CTTTGTTTAATTGTGTGAAT+TGG | 0.285033 | 6_1:+71224911 | Msa0892230:CDS |
| GTGACAGTGATGAATGTTTC+TGG | 0.288212 | 6_1:+71231537 | Msa0892230:CDS |
| TTGAGAAAAGTAGTTTGTTC+TGG | 0.315298 | 6_1:+71232058 | Msa0892230:three_prime_UTR |
| CCCTCCCACTTGTGTTCAAC+AGG | 0.344509 | 6_1:+71222778 | Msa0892230:CDS |
| GGGTATTCACTTGCAAGATT+TGG | 0.347603 | 6_1:-71225293 | None:intergenic |
| AAAATCATGGAGCACCATTA+TGG | 0.348395 | 6_1:+71231861 | Msa0892230:CDS |
| GCTGCAATTGCAATGCTTGT+AGG | 0.354392 | 6_1:+71225197 | Msa0892230:CDS |
| ATCAAGTGCCATCAGATAAC+AGG | 0.359140 | 6_1:-71229161 | None:intergenic |
| GCGAGGATTCCAACATTGTT+GGG | 0.367851 | 6_1:-71222740 | None:intergenic |
| GACTGTAACTACTTACTTCC+AGG | 0.372332 | 6_1:+71231909 | Msa0892230:CDS |
| AAAATATAAAAGTATGTTGT+TGG | 0.375421 | 6_1:+71232276 | Msa0892230:three_prime_UTR |
| ATTTGGCTTGTAAAAGTCAT+AGG | 0.378305 | 6_1:-71225276 | None:intergenic |
| ACATGTTGCCAACTTGCTTT+GGG | 0.379546 | 6_1:-71231254 | None:intergenic |
| GAAGGACCGGCTCGTCCTAC+TGG | 0.384481 | 6_1:+71225167 | Msa0892230:CDS |
| TTTGTTTAATTGTGTGAATT+GGG | 0.387372 | 6_1:+71224912 | Msa0892230:CDS |
| TACATGTTGCCAACTTGCTT+TGG | 0.396808 | 6_1:-71231255 | None:intergenic |
| CCAAAGTTGATTCCATGTAT+AGG | 0.410814 | 6_1:+71231946 | Msa0892230:CDS |
| AGTTTGCTTTCAAAAGCAAT+AGG | 0.411365 | 6_1:-71225230 | None:intergenic |
| CTGCAATTGCAATGCTTGTA+GGG | 0.421131 | 6_1:+71225198 | Msa0892230:CDS |
| GCACCTTATGCATCCTTAAC+CGG | 0.429002 | 6_1:+71230781 | Msa0892230:CDS |
| CAAAGTCCTTTCCACCATAA+TGG | 0.433981 | 6_1:-71231875 | None:intergenic |
| AATATTGATCCAAAGAAAAT+CGG | 0.442407 | 6_1:+71224145 | Msa0892230:CDS |
| ATAACTATAGTTTGATCAGT+TGG | 0.444119 | 6_1:+71232214 | Msa0892230:three_prime_UTR |
| TCAAAAGCAATAGGAGCATC+TGG | 0.448706 | 6_1:-71225221 | None:intergenic |
| CCTATACATGGAATCAACTT+TGG | 0.458961 | 6_1:-71231946 | None:intergenic |
| ATTTGCTTCTAGATTTCATT+CGG | 0.461236 | 6_1:+71222640 | Msa0892230:five_prime_UTR |
| TGGCACTTGATTCTTGCTAT+CGG | 0.465762 | 6_1:+71229173 | Msa0892230:CDS |
| AGCGAGGATTCCAACATTGT+TGG | 0.467020 | 6_1:-71222741 | None:intergenic |
| TGCTTTGGGATTAACGTGCT+TGG | 0.467101 | 6_1:-71231240 | None:intergenic |
| GGCACTTGATTCTTGCTATC+GGG | 0.469033 | 6_1:+71229174 | Msa0892230:CDS |
| AGGGTAGTTATGTTCTCATA+TGG | 0.473249 | 6_1:+71231441 | Msa0892230:CDS |
| CTTGTTTGATGAAGCTGCAA+TGG | 0.473642 | 6_1:+71224036 | Msa0892230:CDS |
| GCTGATCACTGAAGCTAGCT+TGG | 0.474433 | 6_1:+71224007 | Msa0892230:intron |
| AGGGATGTTGACCTTCTTGA+AGG | 0.475647 | 6_1:-71231497 | None:intergenic |
| AGTAGGACGAGCCGGTCCTT+CGG | 0.477033 | 6_1:-71225165 | None:intergenic |
| AAATGTGCAGGTAGGTAAAA+GGG | 0.490501 | 6_1:+71231422 | Msa0892230:intron |
| TTTCTCGTGTAGGTTGTTGA+CGG | 0.491540 | 6_1:+71229124 | Msa0892230:intron |
| ATTGGGTGGAGAGTAGTTCA+TGG | 0.493022 | 6_1:+71224929 | Msa0892230:CDS |
| CTCATGATGGTGTGAGCAAA+GGG | 0.493636 | 6_1:+71223638 | Msa0892230:CDS |
| ACAATGTTCGACAAGTTAAA+GGG | 0.498446 | 6_1:-71231516 | None:intergenic |
| TCTTCACTCCCCAACAATGT+TGG | 0.502732 | 6_1:+71222731 | Msa0892230:CDS |
| TCCAAAGAAAATCGGTCGAT+TGG | 0.505092 | 6_1:+71224153 | Msa0892230:CDS |
| AAAGAAAATCGGTCGATTGG+AGG | 0.508893 | 6_1:+71224156 | Msa0892230:CDS |
| AACTAGAATAAATAGCCATA+AGG | 0.509192 | 6_1:-71232101 | None:intergenic |
| TCAACAAACGCTTGCTATGG+TGG | 0.510512 | 6_1:+71224880 | Msa0892230:CDS |
| TCAAAGTCGTGATCTTGAAA+AGG | 0.519954 | 6_1:+71230816 | Msa0892230:CDS |
| GAAGTAAGTAGTTACAGTCT+TGG | 0.520987 | 6_1:-71231905 | None:intergenic |
| GTTATGTTCTCATATGGAAG+TGG | 0.521574 | 6_1:+71231447 | Msa0892230:CDS |
| ATATACCATTGGACTTGGAC+AGG | 0.521835 | 6_1:+71223663 | Msa0892230:CDS |
| TCACCGGTTAAGGATGCATA+AGG | 0.522100 | 6_1:-71230784 | None:intergenic |
| GGGAAATATACCATTGGACT+TGG | 0.523041 | 6_1:+71223658 | Msa0892230:CDS |
| TCACAATAAGCACGACTCAC+TGG | 0.531942 | 6_1:+71231314 | Msa0892230:CDS |
| TCAGGTATATGCCGAAGGAC+CGG | 0.532624 | 6_1:+71225154 | Msa0892230:intron |
| TTCTCCTTCCGCCTTCAAGA+AGG | 0.538225 | 6_1:+71231486 | Msa0892230:CDS |
| GCTCCTCCAGTAGGACGAGC+CGG | 0.547626 | 6_1:-71225173 | None:intergenic |
| TTGACCTTCTTGAAGGCGGA+AGG | 0.547930 | 6_1:-71231490 | None:intergenic |
| AGCGTAAAATCTCCTATACA+TGG | 0.550598 | 6_1:-71231958 | None:intergenic |
| TTGGTGAGATAGAATGTGCC+TGG | 0.557441 | 6_1:-71231927 | None:intergenic |
| GCTCATGATGGTGTGAGCAA+AGG | 0.562689 | 6_1:+71223637 | Msa0892230:CDS |
| ACGTTAATCCCAAAGCAAGT+TGG | 0.571803 | 6_1:+71231246 | Msa0892230:CDS |
| AGCAAAGGGAAATATACCAT+TGG | 0.577238 | 6_1:+71223652 | Msa0892230:CDS |
| GTGAGTCGTGCTTATTGTGA+AGG | 0.584670 | 6_1:-71231311 | None:intergenic |
| GTTTAATTGTGTGAATTGGG+TGG | 0.587607 | 6_1:+71224915 | Msa0892230:CDS |
| GATTCAACAAACGCTTGCTA+TGG | 0.588340 | 6_1:+71224877 | Msa0892230:CDS |
| CTCACAGACCTGTTATCTGA+TGG | 0.588761 | 6_1:+71229153 | Msa0892230:CDS |
| ATCATGGAGCACCATTATGG+TGG | 0.594905 | 6_1:+71231864 | Msa0892230:CDS |
| CGAGGATTCCAACATTGTTG+GGG | 0.596716 | 6_1:-71222739 | None:intergenic |
| AGCGGTAATACTGACATTGA+AGG | 0.600223 | 6_1:+71224850 | Msa0892230:CDS |
| ACTTTGATAGCTCTCATCAC+CGG | 0.600555 | 6_1:-71230800 | None:intergenic |
| ACAGTCCTGTCCAAGTCCAA+TGG | 0.602089 | 6_1:-71223668 | None:intergenic |
| AGTTCATGGGATGGACGCTA+CGG | 0.602728 | 6_1:+71224943 | Msa0892230:CDS |
| ATTGCAGCTGCTCCTCCAGT+AGG | 0.603437 | 6_1:-71225182 | None:intergenic |
| CATAAGGCATCAAATACAGA+AGG | 0.606831 | 6_1:-71232085 | None:intergenic |
| TTGGAAATATGCAATTGTAG+TGG | 0.607204 | 6_1:+71232295 | Msa0892230:three_prime_UTR |
| GGTGGAAAGGACTTTGTGAC+TGG | 0.608496 | 6_1:+71231882 | Msa0892230:CDS |
| GGAGCACCATTATGGTGGAA+AGG | 0.610343 | 6_1:+71231869 | Msa0892230:CDS |
| ATATACCTGTTGAACACAAG+TGG | 0.612746 | 6_1:-71222783 | None:intergenic |
| CACATCGTACAACACAAACA+TGG | 0.617912 | 6_1:+71222706 | Msa0892230:exon |
| GTGGAGAGTAGTTCATGGGA+TGG | 0.625587 | 6_1:+71224934 | Msa0892230:CDS |
| CCTGTTGAACACAAGTGGGA+GGG | 0.626460 | 6_1:-71222778 | None:intergenic |
| TTGGGTGGAGAGTAGTTCAT+GGG | 0.629989 | 6_1:+71224930 | Msa0892230:CDS |
| GAAGCTTTGGAAGCTCATGA+TGG | 0.632753 | 6_1:+71223625 | Msa0892230:CDS |
| ACCTGTTGAACACAAGTGGG+AGG | 0.635317 | 6_1:-71222779 | None:intergenic |
| AAAATCGGTCGATTGGAGGT+AGG | 0.639954 | 6_1:+71224160 | Msa0892230:CDS |
| CAAGTTGAAGCAGAGAGTTG+AGG | 0.640567 | 6_1:+71231560 | Msa0892230:CDS |
| TATACCTGTTGAACACAAGT+GGG | 0.647490 | 6_1:-71222782 | None:intergenic |
| GGACCGGCTCGTCCTACTGG+AGG | 0.658822 | 6_1:+71225170 | Msa0892230:CDS |
| GGAAATAGATGTCTATAGCG+AGG | 0.665710 | 6_1:-71222757 | None:intergenic |
| GATGTTGACCTTCTTGAAGG+CGG | 0.671663 | 6_1:-71231494 | None:intergenic |
| TGTTGTAATAATCAGGACAG+CGG | 0.715900 | 6_1:+71224832 | Msa0892230:intron |
| GCGGAAGGAGAACATCGTAG+AGG | 0.725504 | 6_1:-71231475 | None:intergenic |
| TGTTGTATGCACAGACAGTG+CGG | 0.735674 | 6_1:+71224969 | Msa0892230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTTATTTATTTATT+TGG | - | chr6_1:71222564-71222583 | None:intergenic | 0.0% |
| !!! | ATGTGATTTTTTTTTTTTTT+TGG | + | chr6_1:71228533-71228552 | Msa0892230:intron | 10.0% |
| !!! | TGTGATTTTTTTTTTTTTTT+GGG | + | chr6_1:71228534-71228553 | Msa0892230:intron | 10.0% |
| !! | TACAATTAAAATTAACTAAA+AGG | - | chr6_1:71230046-71230065 | None:intergenic | 10.0% |
| !! | CAATATTATATTATATCATA+GGG | + | chr6_1:71230227-71230246 | Msa0892230:intron | 10.0% |
| !! | TTAATATAAGAAATGATATT+TGG | - | chr6_1:71231770-71231789 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTCCATTTG+TGG | + | chr6_1:71223073-71223092 | Msa0892230:intron | 15.0% |
| !!! | TTTTTTTTTTTTCCATTTGT+GGG | + | chr6_1:71223074-71223093 | Msa0892230:intron | 15.0% |
| !!! | TTTTAAATCAATGATTTGAT+TGG | + | chr6_1:71223915-71223934 | Msa0892230:intron | 15.0% |
| !!! | TTTTCATTTTTCCTATTTTT+TGG | - | chr6_1:71223957-71223976 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTCATGTTTTTA+TGG | + | chr6_1:71224786-71224805 | Msa0892230:intron | 15.0% |
| !! | AAATACAAATGATAATTCTA+TGG | + | chr6_1:71226029-71226048 | Msa0892230:intron | 15.0% |
| !! | AAATACAAATGATAATTCTA+TGG | + | chr6_1:71226029-71226048 | Msa0892230:intron | 15.0% |
| !!! | AATAAAAATTCAGAGTTTTT+TGG | - | chr6_1:71229229-71229248 | None:intergenic | 15.0% |
| !! | GCAATATTATATTATATCAT+AGG | + | chr6_1:71230226-71230245 | Msa0892230:intron | 15.0% |
| !! | ACATCAAATCAAAAAATTTA+AGG | - | chr6_1:71230459-71230478 | None:intergenic | 15.0% |
| !!! | ATTTGAAGATTTTTTGATTT+TGG | - | chr6_1:71230491-71230510 | None:intergenic | 15.0% |
| !!! | ATCTAAACAAATTTTTTTAC+AGG | + | chr6_1:71230523-71230542 | Msa0892230:intron | 15.0% |
| !!! | TCTAAACAAATTTTTTTACA+GGG | + | chr6_1:71230524-71230543 | Msa0892230:intron | 15.0% |
| !!! | TAAAACAACAGTTTATTTTA+TGG | - | chr6_1:71230668-71230687 | None:intergenic | 15.0% |
| !! | GAACAAAAACAATTATAAAT+AGG | - | chr6_1:71230708-71230727 | None:intergenic | 15.0% |
| !!! | TTTAATTGAAACTGATTTTA+AGG | + | chr6_1:71230938-71230957 | Msa0892230:intron | 15.0% |
| !!! | AAAATATAAAAGTATGTTGT+TGG | + | chr6_1:71232276-71232295 | Msa0892230:three_prime_UTR | 15.0% |
| !! | TTAATATTTCCCCTAAAAAA+GGG | + | chr6_1:71222599-71222618 | Msa0892230:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTTTGCTTCTTATG+TGG | + | chr6_1:71222864-71222883 | Msa0892230:intron | 20.0% |
| !!! | TTTGTTGTGTTTTTTTTTGT+TGG | + | chr6_1:71222945-71222964 | Msa0892230:intron | 20.0% |
| !!! | TTTTTTTGTTGGTTTATTTG+TGG | + | chr6_1:71222956-71222975 | Msa0892230:intron | 20.0% |
| !!! | AAACATGTTTTTGTTTTTGT+TGG | + | chr6_1:71222986-71223005 | Msa0892230:intron | 20.0% |
| !!! | TTTTTTTTTTTCCATTTGTG+GGG | + | chr6_1:71223075-71223094 | Msa0892230:intron | 20.0% |
| !!! | AAAATGATTGTTTTTGCTTA+TGG | + | chr6_1:71223102-71223121 | Msa0892230:intron | 20.0% |
| !!! | ATTAGTAACAAACCTTTTTT+TGG | + | chr6_1:71223430-71223449 | Msa0892230:intron | 20.0% |
| !! | AAACAAAAACAGAATTATCA+GGG | - | chr6_1:71223574-71223593 | None:intergenic | 20.0% |
| !! | AAAACAAAAACAGAATTATC+AGG | - | chr6_1:71223575-71223594 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTTTTTCATTTG+TGG | + | chr6_1:71223583-71223602 | Msa0892230:intron | 20.0% |
| !!! | GTTTTTGTTTTTTCATTTGT+GGG | + | chr6_1:71223584-71223603 | Msa0892230:intron | 20.0% |
| !!! | TAATAGTTTTGCCAAAAAAT+AGG | + | chr6_1:71223943-71223962 | Msa0892230:intron | 20.0% |
| !! | ATAGGAAAAATGAAAAACTT+TGG | + | chr6_1:71223961-71223980 | Msa0892230:intron | 20.0% |
| !! | AATATTGATCCAAAGAAAAT+CGG | + | chr6_1:71224145-71224164 | Msa0892230:CDS | 20.0% |
| !! | AATATCTTTAAGCAAAATGT+TGG | - | chr6_1:71224274-71224293 | None:intergenic | 20.0% |
| !! | AAGTTTAGGAAACAATAAAT+CGG | - | chr6_1:71224732-71224751 | None:intergenic | 20.0% |
| !! | TTTATTGTTTCCTAAACTTA+CGG | + | chr6_1:71224733-71224752 | Msa0892230:intron | 20.0% |
| !! | TTTGTTTAATTGTGTGAATT+GGG | + | chr6_1:71224912-71224931 | Msa0892230:CDS | 20.0% |
| !! | AAGTAAAATTAATACAGAGA+AGG | - | chr6_1:71225334-71225353 | None:intergenic | 20.0% |
| !! | TATAAATGTCTTATATGAAG+TGG | + | chr6_1:71225358-71225377 | Msa0892230:intron | 20.0% |
| !! | TTTCTATTATCTAACAATCT+AGG | + | chr6_1:71225544-71225563 | Msa0892230:intron | 20.0% |
| !! | ATTCTCATTAATTGATCAAA+TGG | - | chr6_1:71225984-71226003 | None:intergenic | 20.0% |
| !! | AATGATAATTCTATGGTATT+TGG | + | chr6_1:71226036-71226055 | Msa0892230:intron | 20.0% |
| !! | ATGATAATTCTATGGTATTT+GGG | + | chr6_1:71226037-71226056 | Msa0892230:intron | 20.0% |
| !! | GAGATTATTGCATAATAATA+AGG | + | chr6_1:71226059-71226078 | Msa0892230:intron | 20.0% |
| !! | TATTATAAATAAAGATGCAG+AGG | - | chr6_1:71226213-71226232 | None:intergenic | 20.0% |
| !!! | ATTTTTCAATTAGATCAAAC+AGG | - | chr6_1:71227097-71227116 | None:intergenic | 20.0% |
| !!! | TCTATGTTTTATGCTATTTT+TGG | + | chr6_1:71227258-71227277 | Msa0892230:intron | 20.0% |
| !!! | AAGTTATTTTTTGTTTGGTA+TGG | - | chr6_1:71227528-71227547 | None:intergenic | 20.0% |
| !! | ATACCAAACAAAAAATAACT+TGG | + | chr6_1:71227527-71227546 | Msa0892230:intron | 20.0% |
| !! | TACCAAACAAAAAATAACTT+GGG | + | chr6_1:71227528-71227547 | Msa0892230:intron | 20.0% |
| !! | AATGATAATTCTATGGTATT+TGG | + | chr6_1:71226036-71226055 | Msa0892230:intron | 20.0% |
| !! | ATGATAATTCTATGGTATTT+GGG | + | chr6_1:71226037-71226056 | Msa0892230:intron | 20.0% |
| !! | GAGATTATTGCATAATAATA+AGG | + | chr6_1:71226059-71226078 | Msa0892230:intron | 20.0% |
| !! | TATTATAAATAAAGATGCAG+AGG | - | chr6_1:71226213-71226232 | None:intergenic | 20.0% |
| !! | TTCTTTCATAATATCAACAA+TGG | + | chr6_1:71228959-71228978 | Msa0892230:intron | 20.0% |
| !!! | TTAGTATTTTCTTCTTTAAC+AGG | + | chr6_1:71229497-71229516 | Msa0892230:intron | 20.0% |
| !!! | TAGTATTTTCTTCTTTAACA+GGG | + | chr6_1:71229498-71229517 | Msa0892230:intron | 20.0% |
| !!! | TAGTATTTTCTTGTTTACAA+TGG | + | chr6_1:71229584-71229603 | Msa0892230:intron | 20.0% |
| !! | ACTTATTTAAGTATATCTAC+TGG | + | chr6_1:71229789-71229808 | Msa0892230:intron | 20.0% |
| !!! | ATTAAGTTGTTTATACAAAC+AGG | + | chr6_1:71229999-71230018 | Msa0892230:intron | 20.0% |
| !!! | TTAAGTTGTTTATACAAACA+GGG | + | chr6_1:71230000-71230019 | Msa0892230:intron | 20.0% |
| !! | TTTAATTGTAATAAGCCAAA+AGG | + | chr6_1:71230056-71230075 | Msa0892230:intron | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | + | chr6_1:71230317-71230336 | Msa0892230:intron | 20.0% |
| !!! | CTAAACAAATTTTTTTACAG+GGG | + | chr6_1:71230525-71230544 | Msa0892230:intron | 20.0% |
| !!! | TAAACAAATTTTTTTACAGG+GGG | + | chr6_1:71230526-71230545 | Msa0892230:intron | 20.0% |
| !!! | TTATAATTGTTTTTGTTCTC+TGG | + | chr6_1:71230710-71230729 | Msa0892230:intron | 20.0% |
| !!! | AAACTGATTTTAAGGTAAAA+TGG | + | chr6_1:71230946-71230965 | Msa0892230:intron | 20.0% |
| !! | AAATTTGAAAGTAATGTTCA+AGG | + | chr6_1:71231009-71231028 | Msa0892230:intron | 20.0% |
| !! | CAATTTGAATTTAGTATGTT+TGG | - | chr6_1:71231120-71231139 | None:intergenic | 20.0% |
| !! | AAAAAAAATATATGACACGA+AGG | + | chr6_1:71231212-71231231 | Msa0892230:CDS | 20.0% |
| !!! | CTTTTTTAGGGGAAATATTA+AGG | - | chr6_1:71222600-71222619 | None:intergenic | 25.0% |
| ! | CTTAATATTTCCCCTAAAAA+AGG | + | chr6_1:71222598-71222617 | Msa0892230:five_prime_UTR | 25.0% |
| ! | TAATATTTCCCCTAAAAAAG+GGG | + | chr6_1:71222600-71222619 | Msa0892230:five_prime_UTR | 25.0% |
| ! | ATTTGCTTCTAGATTTCATT+CGG | + | chr6_1:71222640-71222659 | Msa0892230:five_prime_UTR | 25.0% |
| !! | TCCTTTTCTCAAAATTTGAT+CGG | + | chr6_1:71223338-71223357 | Msa0892230:intron | 25.0% |
| !! | TAATTAACTAGCCTATACAA+AGG | - | chr6_1:71223414-71223433 | None:intergenic | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | - | chr6_1:71223481-71223500 | None:intergenic | 25.0% |
| !!! | TGTCATTATTTTAGCATATG+TGG | + | chr6_1:71224365-71224384 | Msa0892230:intron | 25.0% |
| ! | TGTTGTCAAGTATAGAAATA+TGG | - | chr6_1:71224550-71224569 | None:intergenic | 25.0% |
| !! | CATAAATTTAAAGTCGTGTT+TGG | + | chr6_1:71224568-71224587 | Msa0892230:intron | 25.0% |
| ! | TATGCAAGAATACAAAAGAT+AGG | - | chr6_1:71224652-71224671 | None:intergenic | 25.0% |
| !!! | TATCATCTTTTTTGTTCCTT+CGG | - | chr6_1:71224682-71224701 | None:intergenic | 25.0% |
| ! | TCATGTATGTTGTAATAATC+AGG | + | chr6_1:71224825-71224844 | Msa0892230:intron | 25.0% |
| !! | CTTTGTTTAATTGTGTGAAT+TGG | + | chr6_1:71224911-71224930 | Msa0892230:CDS | 25.0% |
| ! | TTACTAATTCTTCGTGTATA+AGG | + | chr6_1:71225065-71225084 | Msa0892230:intron | 25.0% |
| ! | TGTCATAGTTGTTAAACATA+TGG | - | chr6_1:71225126-71225145 | None:intergenic | 25.0% |
| !! | AACTATGACATTCTATTTTC+AGG | + | chr6_1:71225136-71225155 | Msa0892230:intron | 25.0% |
| ! | TAAAATTAATACAGAGAAGG+TGG | - | chr6_1:71225331-71225350 | None:intergenic | 25.0% |
| ! | AATAAAACCAACTTCACTTA+GGG | + | chr6_1:71225409-71225428 | Msa0892230:intron | 25.0% |
| ! | CTAAGATAGTTATAACTAAC+TGG | - | chr6_1:71225888-71225907 | None:intergenic | 25.0% |
| ! | CAGTTAGTTATAACTATCTT+AGG | + | chr6_1:71225886-71225905 | Msa0892230:intron | 25.0% |
| ! | ATACAATGGCTGTATTATAT+AGG | - | chr6_1:71225915-71225934 | None:intergenic | 25.0% |
| ! | AACTTATATAGAGTTCATAG+AGG | - | chr6_1:71225953-71225972 | None:intergenic | 25.0% |
| ! | TTAATGAGAATGTTAGATAC+TGG | + | chr6_1:71225993-71226012 | Msa0892230:intron | 25.0% |
| !! | ATTTTATAACTTATGCCCTT+AGG | + | chr6_1:71226322-71226341 | Msa0892230:intron | 25.0% |
| ! | ATGTGAAATACATTAGTTGT+CGG | - | chr6_1:71226826-71226845 | None:intergenic | 25.0% |
| ! | TAATATTGAGATCTCTTCAA+TGG | - | chr6_1:71226888-71226907 | None:intergenic | 25.0% |
| ! | ATCTCAATATTAAGAGTAGA+TGG | + | chr6_1:71226896-71226915 | Msa0892230:intron | 25.0% |
| ! | ATAAAGATGCTATTGATGAA+GGG | - | chr6_1:71227163-71227182 | None:intergenic | 25.0% |
| !! | AAACCTTTTCAAACAATCAT+CGG | - | chr6_1:71227203-71227222 | None:intergenic | 25.0% |
| !!! | TTTATGCTATTTTTGGAATC+TGG | + | chr6_1:71227265-71227284 | Msa0892230:intron | 25.0% |
| ! | ACAAAACAATTCTAGTAAGT+GGG | - | chr6_1:71227326-71227345 | None:intergenic | 25.0% |
| ! | TCAATTTAATGATAGCCATT+GGG | - | chr6_1:71227461-71227480 | None:intergenic | 25.0% |
| ! | TTCAATTTAATGATAGCCAT+TGG | - | chr6_1:71227462-71227481 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTTTGGTATGGA+AGG | - | chr6_1:71227524-71227543 | None:intergenic | 25.0% |
| !!! | AATTCCTATTTTTGATGGAA+AGG | - | chr6_1:71228469-71228488 | None:intergenic | 25.0% |
| !!! | AGACTAATTCCTATTTTTGA+TGG | - | chr6_1:71228474-71228493 | None:intergenic | 25.0% |
| !! | ATTTTATAACTTATGCCCTT+AGG | + | chr6_1:71226322-71226341 | Msa0892230:intron | 25.0% |
| ! | ATAGATTCTCTGTTAGATAT+AGG | - | chr6_1:71228927-71228946 | None:intergenic | 25.0% |
| !!! | ATTTTTGTTTGTAGACTGAT+TGG | - | chr6_1:71229075-71229094 | None:intergenic | 25.0% |
| ! | CATGTACAGATTTGAAAAAT+CGG | + | chr6_1:71229269-71229288 | Msa0892230:intron | 25.0% |
| !! | TTTTCATTCTCCATATAACA+AGG | + | chr6_1:71229332-71229351 | Msa0892230:CDS | 25.0% |
| !! | CATATGATTACCTTGTTATA+TGG | - | chr6_1:71229345-71229364 | None:intergenic | 25.0% |
| ! | TTGAAAGAGTCAAAAGAATA+GGG | - | chr6_1:71229616-71229635 | None:intergenic | 25.0% |
| ! | CTATAAGCTATTTGTATAAC+AGG | - | chr6_1:71229943-71229962 | None:intergenic | 25.0% |
| ! | TAGATAAGAACTTATACGAT+AGG | + | chr6_1:71229960-71229979 | Msa0892230:intron | 25.0% |
| !!! | CAAGATTTTCTAGTACTTAT+TGG | + | chr6_1:71230127-71230146 | Msa0892230:intron | 25.0% |
| ! | CCAAAAATCTTCAAATTACA+GGG | - | chr6_1:71230314-71230333 | None:intergenic | 25.0% |
| ! | ACCAAAAATCTTCAAATTAC+AGG | - | chr6_1:71230315-71230334 | None:intergenic | 25.0% |
| ! | TGTACAGTAAAAATTCATGA+AGG | - | chr6_1:71230344-71230363 | None:intergenic | 25.0% |
| ! | ACTGTACAAAATCAATGATA+TGG | + | chr6_1:71230356-71230375 | Msa0892230:intron | 25.0% |
| !!! | TTTTTGATTTGATGTCATGA+AGG | + | chr6_1:71230464-71230483 | Msa0892230:intron | 25.0% |
| ! | TCAAAAAATCTTCAAATTGC+AGG | + | chr6_1:71230494-71230513 | Msa0892230:intron | 25.0% |
| ! | CAAAAAATCTTCAAATTGCA+GGG | + | chr6_1:71230495-71230514 | Msa0892230:intron | 25.0% |
| ! | ACCTAACAGAATATGATATA+GGG | - | chr6_1:71230596-71230615 | None:intergenic | 25.0% |
| ! | TACCTAACAGAATATGATAT+AGG | - | chr6_1:71230597-71230616 | None:intergenic | 25.0% |
| ! | TTGAATGTAGAAATCATGTT+TGG | + | chr6_1:71231040-71231059 | Msa0892230:intron | 25.0% |
| ! | TTTGAATTTAGTATGTTTGG+TGG | - | chr6_1:71231117-71231136 | None:intergenic | 25.0% |
| !!! | GTTTTGTTAAAGATGATGTT+TGG | - | chr6_1:71231795-71231814 | None:intergenic | 25.0% |
| ! | AACTAGAATAAATAGCCATA+AGG | - | chr6_1:71232104-71232123 | None:intergenic | 25.0% |
| ! | ATAACTATAGTTTGATCAGT+TGG | + | chr6_1:71232214-71232233 | Msa0892230:three_prime_UTR | 25.0% |
| !!! | TTCAACTAACCCCTTTTTTA+GGG | - | chr6_1:71222612-71222631 | None:intergenic | 30.0% |
| !!! | TTTCAACTAACCCCTTTTTT+AGG | - | chr6_1:71222613-71222632 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTTGTTGGCCAAA+TGG | + | chr6_1:71222994-71223013 | Msa0892230:intron | 30.0% |
| !!! | TTTGTTTTTGTTGGCCAAAT+GGG | + | chr6_1:71222995-71223014 | Msa0892230:intron | 30.0% |
| !!! | TCATTTTTTAACCCCACAAA+TGG | - | chr6_1:71223089-71223108 | None:intergenic | 30.0% |
| !! | ACCGATCAAATTTTGAGAAA+AGG | - | chr6_1:71223342-71223361 | None:intergenic | 30.0% |
| ATTACATTCAGCCTTTGTAT+AGG | + | chr6_1:71223400-71223419 | Msa0892230:intron | 30.0% | |
| !!! | AGTAACAAACCTTTTTTTGG+TGG | + | chr6_1:71223433-71223452 | Msa0892230:intron | 30.0% |
| !! | TTTGTGGGATTGTTTGATTT+TGG | + | chr6_1:71223599-71223618 | Msa0892230:intron | 30.0% |
| TTGAAGATGTTATCTCAATG+AGG | + | chr6_1:71223710-71223729 | Msa0892230:intron | 30.0% | |
| TTACTAATTTCATGCTTGTG+TGG | + | chr6_1:71223985-71224004 | Msa0892230:intron | 30.0% | |
| ATACCTCAAAAATTTGCATG+AGG | - | chr6_1:71224228-71224247 | None:intergenic | 30.0% | |
| TTAGGAAACAATAAATCGGA+TGG | - | chr6_1:71224728-71224747 | None:intergenic | 30.0% | |
| TTTATCTCATCCGTAAGTTT+AGG | - | chr6_1:71224746-71224765 | None:intergenic | 30.0% | |
| ACTTACGGATGAGATAAATT+TGG | + | chr6_1:71224748-71224767 | Msa0892230:intron | 30.0% | |
| !!! | GAGGAAGATTTTTGTTTTCT+AGG | - | chr6_1:71225013-71225032 | None:intergenic | 30.0% |
| AAACAGTAGCAAAAGAAAGT+AGG | - | chr6_1:71225038-71225057 | None:intergenic | 30.0% | |
| ! | AGTTTGCTTTCAAAAGCAAT+AGG | - | chr6_1:71225233-71225252 | None:intergenic | 30.0% |
| !! | TTGCTTTTGAAAGCAAACTA+CGG | + | chr6_1:71225234-71225253 | Msa0892230:CDS | 30.0% |
| !! | ATTTGGCTTGTAAAAGTCAT+AGG | - | chr6_1:71225279-71225298 | None:intergenic | 30.0% |
| CAATAAAACCAACTTCACTT+AGG | + | chr6_1:71225408-71225427 | Msa0892230:intron | 30.0% | |
| ATAAGTGCATGTTGTATAAG+TGG | - | chr6_1:71225655-71225674 | None:intergenic | 30.0% | |
| !! | GACTTTAATAAGGTCTTGTT+TGG | - | chr6_1:71225705-71225724 | None:intergenic | 30.0% |
| TTGAGGACATGACTTTAATA+AGG | - | chr6_1:71225715-71225734 | None:intergenic | 30.0% | |
| !! | ATATAGAAGCGTACTCTTTT+CGG | - | chr6_1:71225748-71225767 | None:intergenic | 30.0% |
| ATAAGAAAGTAACTGCAGAA+AGG | + | chr6_1:71226109-71226128 | Msa0892230:intron | 30.0% | |
| AATAAAGATGCAGAGGAAAA+GGG | - | chr6_1:71226206-71226225 | None:intergenic | 30.0% | |
| AAATAAAGATGCAGAGGAAA+AGG | - | chr6_1:71226207-71226226 | None:intergenic | 30.0% | |
| TTGTTCATGTTCAATTGCTT+GGG | - | chr6_1:71226575-71226594 | None:intergenic | 30.0% | |
| ATTGTTCATGTTCAATTGCT+TGG | - | chr6_1:71226576-71226595 | None:intergenic | 30.0% | |
| !! | TTTTGGGGAATTCATTTATC+AGG | - | chr6_1:71226672-71226691 | None:intergenic | 30.0% |
| TAATGTATTTCACATGCCAA+GGG | + | chr6_1:71226831-71226850 | Msa0892230:intron | 30.0% | |
| !! | GCTTTGATTGATGATGTATT+AGG | - | chr6_1:71226857-71226876 | None:intergenic | 30.0% |
| ! | TAATTCTTTTTATGAGCAGG+AGG | - | chr6_1:71226952-71226971 | None:intergenic | 30.0% |
| AGTTACTAAGTACAACAAAG+TGG | - | chr6_1:71227002-71227021 | None:intergenic | 30.0% | |
| GATAAGTTTATCCAAGTGAA+AGG | - | chr6_1:71227031-71227050 | None:intergenic | 30.0% | |
| ACTTATCAGCAATCAGATAT+AGG | + | chr6_1:71227044-71227063 | Msa0892230:intron | 30.0% | |
| TAAAGATGCTATTGATGAAG+GGG | - | chr6_1:71227162-71227181 | None:intergenic | 30.0% | |
| CATAAAGATGCTATTGATGA+AGG | - | chr6_1:71227164-71227183 | None:intergenic | 30.0% | |
| AATAGCATCTTTATGACTGA+AGG | + | chr6_1:71227169-71227188 | Msa0892230:intron | 30.0% | |
| AACCTCTAAATTACAACCAT+AGG | + | chr6_1:71227231-71227250 | Msa0892230:intron | 30.0% | |
| ACCTCTAAATTACAACCATA+GGG | + | chr6_1:71227232-71227251 | Msa0892230:intron | 30.0% | |
| ATAAAACATAGACAACCCTA+TGG | - | chr6_1:71227250-71227269 | None:intergenic | 30.0% | |
| CACAAAACAATTCTAGTAAG+TGG | - | chr6_1:71227327-71227346 | None:intergenic | 30.0% | |
| GATCTAACAATAAACCTAGT+GGG | - | chr6_1:71227355-71227374 | None:intergenic | 30.0% | |
| AGAAAAACAGTGGAACAAAT+TGG | - | chr6_1:71227393-71227412 | None:intergenic | 30.0% | |
| !! | TATGGAAGGTATTAGAAATG+CGG | - | chr6_1:71227510-71227529 | None:intergenic | 30.0% |
| !!! | GACCCAAGTTATTTTTTGTT+TGG | - | chr6_1:71227533-71227552 | None:intergenic | 30.0% |
| ATGTGCTGAGTATTAATTGT+TGG | + | chr6_1:71227748-71227767 | Msa0892230:intron | 30.0% | |
| AGAAAACTATGAAGAGTCAA+AGG | - | chr6_1:71228172-71228191 | None:intergenic | 30.0% | |
| TTTCTCTGTGATCCAAATAT+TGG | + | chr6_1:71228398-71228417 | Msa0892230:intron | 30.0% | |
| TCTTCCTTTCCATCAAAAAT+AGG | + | chr6_1:71228462-71228481 | Msa0892230:intron | 30.0% | |
| ATAAGAAAGTAACTGCAGAA+AGG | + | chr6_1:71226109-71226128 | Msa0892230:intron | 30.0% | |
| AATAAAGATGCAGAGGAAAA+GGG | - | chr6_1:71226206-71226225 | None:intergenic | 30.0% | |
| AAATAAAGATGCAGAGGAAA+AGG | - | chr6_1:71226207-71226226 | None:intergenic | 30.0% | |
| ! | TTTTAACCTTTTTCTCGTGT+AGG | + | chr6_1:71229114-71229133 | Msa0892230:intron | 30.0% |
| TACAGATTTGAAAAATCGGA+GGG | + | chr6_1:71229273-71229292 | Msa0892230:intron | 30.0% | |
| TGAAATCATTTCTCCATACT+TGG | + | chr6_1:71229384-71229403 | Msa0892230:intron | 30.0% | |
| ATTTCTCCATACTTGGATTT+CGG | + | chr6_1:71229391-71229410 | Msa0892230:intron | 30.0% | |
| AACAAAGAGTCAGAAGAATA+GGG | - | chr6_1:71229530-71229549 | None:intergenic | 30.0% | |
| AAACAAAGAGTCAGAAGAAT+AGG | - | chr6_1:71229531-71229550 | None:intergenic | 30.0% | |
| GTTGAAAGAGTCAAAAGAAT+AGG | - | chr6_1:71229617-71229636 | None:intergenic | 30.0% | |
| !! | TTGTGCAAAAAAGTTTTGGT+CGG | + | chr6_1:71229683-71229702 | Msa0892230:CDS | 30.0% |
| CAATCACATCAAAAGGAAAA+TGG | - | chr6_1:71229764-71229783 | None:intergenic | 30.0% | |
| ! | CATTTTCCTTTTGATGTGAT+TGG | + | chr6_1:71229762-71229781 | Msa0892230:intron | 30.0% |
| AATTGTAATAAGCCAAAAGG+TGG | + | chr6_1:71230059-71230078 | Msa0892230:intron | 30.0% | |
| TGAAACATGAAATTTCTGCA+TGG | + | chr6_1:71230168-71230187 | Msa0892230:intron | 30.0% | |
| AAATCTTCAAATTACAGGGT+TGG | - | chr6_1:71230310-71230329 | None:intergenic | 30.0% | |
| ! | CCCTGTAATTTGAAGATTTT+TGG | + | chr6_1:71230311-71230330 | Msa0892230:intron | 30.0% |
| TACAAAATCAATGATATGGC+AGG | + | chr6_1:71230360-71230379 | Msa0892230:intron | 30.0% | |
| AACCTGAAATGTCAATGATA+TGG | + | chr6_1:71230387-71230406 | Msa0892230:intron | 30.0% | |
| ! | CCTGTAATATTAGCGATTTT+CGG | - | chr6_1:71230556-71230575 | None:intergenic | 30.0% |
| CGAAAATCGCTAATATTACA+GGG | + | chr6_1:71230554-71230573 | Msa0892230:intron | 30.0% | |
| GAAAATCGCTAATATTACAG+GGG | + | chr6_1:71230555-71230574 | Msa0892230:intron | 30.0% | |
| AAAATCGCTAATATTACAGG+GGG | + | chr6_1:71230556-71230575 | Msa0892230:intron | 30.0% | |
| ACCCTATATCATATTCTGTT+AGG | + | chr6_1:71230592-71230611 | Msa0892230:intron | 30.0% | |
| !! | GATTAGAGTTGATTTTAACG+TGG | - | chr6_1:71231089-71231108 | None:intergenic | 30.0% |
| !!! | ATATTTTTTTTGCAGCTTGC+TGG | - | chr6_1:71231203-71231222 | None:intergenic | 30.0% |
| CATTTAAAGACGTTCAATGT+CGG | - | chr6_1:71231407-71231426 | None:intergenic | 30.0% | |
| ACAATGTTCGACAAGTTAAA+GGG | - | chr6_1:71231519-71231538 | None:intergenic | 30.0% | |
| GAAGAGAAAGAAAATAAGGT+GGG | - | chr6_1:71231722-71231741 | None:intergenic | 30.0% | |
| TGAAGAGAAAGAAAATAAGG+TGG | - | chr6_1:71231723-71231742 | None:intergenic | 30.0% | |
| GTGTGAAGAGAAAGAAAATA+AGG | - | chr6_1:71231726-71231745 | None:intergenic | 30.0% | |
| !!! | TTTTCGACAAATTTTTCAGG+TGG | - | chr6_1:71231837-71231856 | None:intergenic | 30.0% |
| ! | GTGTTTTCGACAAATTTTTC+AGG | - | chr6_1:71231840-71231859 | None:intergenic | 30.0% |
| TGTCGAAAACACAAAAATCA+TGG | + | chr6_1:71231848-71231867 | Msa0892230:CDS | 30.0% | |
| !! | TTGAGAAAAGTAGTTTGTTC+TGG | + | chr6_1:71232058-71232077 | Msa0892230:three_prime_UTR | 30.0% |
| TTGGAAATATGCAATTGTAG+TGG | + | chr6_1:71232295-71232314 | Msa0892230:three_prime_UTR | 30.0% | |
| !!! | TCAACTAACCCCTTTTTTAG+GGG | - | chr6_1:71222611-71222630 | None:intergenic | 35.0% |
| TATACCTGTTGAACACAAGT+GGG | - | chr6_1:71222785-71222804 | None:intergenic | 35.0% | |
| ATATACCTGTTGAACACAAG+TGG | - | chr6_1:71222786-71222805 | None:intergenic | 35.0% | |
| ! | AAGAAGAAAGTGCATCATGA+AGG | - | chr6_1:71222812-71222831 | None:intergenic | 35.0% |
| TGTATGTGTGCATTCTTCAT+AGG | + | chr6_1:71223375-71223394 | Msa0892230:intron | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr6_1:71223476-71223495 | None:intergenic | 35.0% | |
| !! | TGGGATTGTTTGATTTTGGT+AGG | + | chr6_1:71223603-71223622 | Msa0892230:intron | 35.0% |
| !! | TTGATTTTGGTAGGAAGCTT+TGG | + | chr6_1:71223612-71223631 | Msa0892230:intron | 35.0% |
| AGCAAAGGGAAATATACCAT+TGG | + | chr6_1:71223652-71223671 | Msa0892230:CDS | 35.0% | |
| CTCAAAAATTTGCATGAGGA+AGG | - | chr6_1:71224224-71224243 | None:intergenic | 35.0% | |
| ! | CTTCCTCATGCAAATTTTTG+AGG | + | chr6_1:71224222-71224241 | Msa0892230:CDS | 35.0% |
| ! | TCAGTCTTGTACCAAAAGAA+GGG | - | chr6_1:71224614-71224633 | None:intergenic | 35.0% |
| ACGGATGAGATAAATTTGGT+AGG | + | chr6_1:71224752-71224771 | Msa0892230:intron | 35.0% | |
| TGTTGTAATAATCAGGACAG+CGG | + | chr6_1:71224832-71224851 | Msa0892230:intron | 35.0% | |
| GTTTAATTGTGTGAATTGGG+TGG | + | chr6_1:71224915-71224934 | Msa0892230:CDS | 35.0% | |
| !!! | TATTTTCAGGTATATGCCGA+AGG | + | chr6_1:71225149-71225168 | Msa0892230:intron | 35.0% |
| !! | TGCTTTTGAAAGCAAACTAC+GGG | + | chr6_1:71225235-71225254 | Msa0892230:CDS | 35.0% |
| GTAGGATAGCTATGATACAA+TGG | - | chr6_1:71225929-71225948 | None:intergenic | 35.0% | |
| ! | TATAGAGTTCATAGAGGTGT+AGG | - | chr6_1:71225947-71225966 | None:intergenic | 35.0% |
| !!! | TTTTGTATGTGGGTTGGTTT+GGG | - | chr6_1:71226170-71226189 | None:intergenic | 35.0% |
| !!! | ATTTTGTATGTGGGTTGGTT+TGG | - | chr6_1:71226171-71226190 | None:intergenic | 35.0% |
| ! | GCATTGGGTATTTTGTATGT+GGG | - | chr6_1:71226180-71226199 | None:intergenic | 35.0% |
| GTTAGATATAGGACTCCTAA+GGG | - | chr6_1:71226340-71226359 | None:intergenic | 35.0% | |
| TGTTAGATATAGGACTCCTA+AGG | - | chr6_1:71226341-71226360 | None:intergenic | 35.0% | |
| AGGACAAGGTGAATCTTTAA+GGG | - | chr6_1:71226372-71226391 | None:intergenic | 35.0% | |
| ATATGTTATCCTTCACCTTG+AGG | - | chr6_1:71226392-71226411 | None:intergenic | 35.0% | |
| ! | GTCACTCTACTTCAAGTTAT+GGG | - | chr6_1:71226429-71226448 | None:intergenic | 35.0% |
| ! | TGTCACTCTACTTCAAGTTA+TGG | - | chr6_1:71226430-71226449 | None:intergenic | 35.0% |
| ! | ACAGCACAATGAGAGTTTTT+GGG | - | chr6_1:71226688-71226707 | None:intergenic | 35.0% |
| ! | TACAGCACAATGAGAGTTTT+TGG | - | chr6_1:71226689-71226708 | None:intergenic | 35.0% |
| ATGACTCGATCACTTGAAAT+GGG | - | chr6_1:71226767-71226786 | None:intergenic | 35.0% | |
| AATTCCACTCCCATTGTAAT+TGG | + | chr6_1:71226793-71226812 | Msa0892230:intron | 35.0% | |
| CTAATGTATTTCACATGCCA+AGG | + | chr6_1:71226830-71226849 | Msa0892230:intron | 35.0% | |
| TATTGAGATCTCTTCAATGG+TGG | - | chr6_1:71226885-71226904 | None:intergenic | 35.0% | |
| ! | GCGTAATTCTTTTTATGAGC+AGG | - | chr6_1:71226955-71226974 | None:intergenic | 35.0% |
| TTTATCCAAGTGAAAGGTGA+AGG | - | chr6_1:71227025-71227044 | None:intergenic | 35.0% | |
| TCACCGATGATTGTTTGAAA+AGG | + | chr6_1:71227197-71227216 | Msa0892230:intron | 35.0% | |
| ACCCTATGGTTGTAATTTAG+AGG | - | chr6_1:71227236-71227255 | None:intergenic | 35.0% | |
| AGTGGGTGAGAGAAATTAAA+AGG | - | chr6_1:71227309-71227328 | None:intergenic | 35.0% | |
| GGATCTAACAATAAACCTAG+TGG | - | chr6_1:71227356-71227375 | None:intergenic | 35.0% | |
| ! | AAATTGGTCAGGTTGTATGT+TGG | - | chr6_1:71227377-71227396 | None:intergenic | 35.0% |
| AGTAGATGATACAAACCAGA+AGG | - | chr6_1:71227416-71227435 | None:intergenic | 35.0% | |
| AGCCATTGGGTTATGAAAAA+GGG | - | chr6_1:71227448-71227467 | None:intergenic | 35.0% | |
| TAGCCATTGGGTTATGAAAA+AGG | - | chr6_1:71227449-71227468 | None:intergenic | 35.0% | |
| AGGAATAGAGTTACTAGGTT+CGG | - | chr6_1:71227485-71227504 | None:intergenic | 35.0% | |
| GATAACAGGGTCAATTGTTA+AGG | - | chr6_1:71227584-71227603 | None:intergenic | 35.0% | |
| ! | TGTACCATGCATTTTGTGAA+TGG | + | chr6_1:71228054-71228073 | Msa0892230:intron | 35.0% |
| AAACTATGAAGAGTCAAAGG+AGG | - | chr6_1:71228169-71228188 | None:intergenic | 35.0% | |
| ACGTGGAAGATATTTGAAAG+AGG | - | chr6_1:71228291-71228310 | None:intergenic | 35.0% | |
| TCTTTCAAATATCTTCCACG+TGG | + | chr6_1:71228290-71228309 | Msa0892230:intron | 35.0% | |
| TTGGATCACAGAGAAAATGA+AGG | - | chr6_1:71228394-71228413 | None:intergenic | 35.0% | |
| !! | GGTACTTTGAAGCCAATATT+TGG | - | chr6_1:71228413-71228432 | None:intergenic | 35.0% |
| !!! | CTTCAAAGTACCGTTTTAAC+TGG | + | chr6_1:71228421-71228440 | Msa0892230:intron | 35.0% |
| ! | ATTAGTCTCTCCAACATCAT+TGG | + | chr6_1:71228486-71228505 | Msa0892230:intron | 35.0% |
| !!! | TTTTGTATGTGGGTTGGTTT+GGG | - | chr6_1:71226170-71226189 | None:intergenic | 35.0% |
| !!! | ATTTTGTATGTGGGTTGGTT+TGG | - | chr6_1:71226171-71226190 | None:intergenic | 35.0% |
| ! | GCATTGGGTATTTTGTATGT+GGG | - | chr6_1:71226180-71226199 | None:intergenic | 35.0% |
| GTTAGATATAGGACTCCTAA+GGG | - | chr6_1:71226340-71226359 | None:intergenic | 35.0% | |
| TGTTAGATATAGGACTCCTA+AGG | - | chr6_1:71226341-71226360 | None:intergenic | 35.0% | |
| GTACAGATTTGAAAAATCGG+AGG | + | chr6_1:71229272-71229291 | Msa0892230:intron | 35.0% | |
| ACAGATTTGAAAAATCGGAG+GGG | + | chr6_1:71229274-71229293 | Msa0892230:intron | 35.0% | |
| AAAACACCGAAATCCAAGTA+TGG | - | chr6_1:71229400-71229419 | None:intergenic | 35.0% | |
| ! | CAGCTTGTGCAAAAAAGTTT+TGG | + | chr6_1:71229679-71229698 | Msa0892230:intron | 35.0% |
| GTAGATCCAATCACATCAAA+AGG | - | chr6_1:71229771-71229790 | None:intergenic | 35.0% | |
| TACTGGTATATGAACTTGTG+AGG | + | chr6_1:71229806-71229825 | Msa0892230:intron | 35.0% | |
| ! | CACATTCATAAGTTGTTTCC+AGG | + | chr6_1:71229862-71229881 | Msa0892230:intron | 35.0% |
| ! | TCCAGGATAACTTGTGAAAA+TGG | + | chr6_1:71229879-71229898 | Msa0892230:intron | 35.0% |
| ATTACAGGGTTGGAATTACA+GGG | - | chr6_1:71230300-71230319 | None:intergenic | 35.0% | |
| AATTACAGGGTTGGAATTAC+AGG | - | chr6_1:71230301-71230320 | None:intergenic | 35.0% | |
| TGCCATATCATTGACATTTC+AGG | - | chr6_1:71230392-71230411 | None:intergenic | 35.0% | |
| TGAAATGTCAATGATATGGC+AGG | + | chr6_1:71230391-71230410 | Msa0892230:intron | 35.0% | |
| GAAATGTCAATGATATGGCA+GGG | + | chr6_1:71230392-71230411 | Msa0892230:intron | 35.0% | |
| AAATGTCAATGATATGGCAG+GGG | + | chr6_1:71230393-71230412 | Msa0892230:intron | 35.0% | |
| CCTGTAATTTGAGCGAATTT+CGG | - | chr6_1:71230425-71230444 | None:intergenic | 35.0% | |
| CGAAATTCGCTCAAATTACA+GGG | + | chr6_1:71230423-71230442 | Msa0892230:intron | 35.0% | |
| GAAATTCGCTCAAATTACAG+GGG | + | chr6_1:71230424-71230443 | Msa0892230:intron | 35.0% | |
| AAATTCGCTCAAATTACAGG+GGG | + | chr6_1:71230425-71230444 | Msa0892230:intron | 35.0% | |
| CCGAAAATCGCTAATATTAC+AGG | + | chr6_1:71230553-71230572 | Msa0892230:intron | 35.0% | |
| ! | TTTTATGGTTCATGTACTCC+TGG | - | chr6_1:71230653-71230672 | None:intergenic | 35.0% |
| !!! | TTGTACCAGTTTTGTTGATG+AGG | + | chr6_1:71230741-71230760 | Msa0892230:intron | 35.0% |
| TCAAAGTCGTGATCTTGAAA+AGG | + | chr6_1:71230816-71230835 | Msa0892230:CDS | 35.0% | |
| TGAAAAGGTAGCTAATCTTG+TGG | + | chr6_1:71230831-71230850 | Msa0892230:intron | 35.0% | |
| ! | TTTAGTATGTTTGGTGGTAC+TGG | - | chr6_1:71231111-71231130 | None:intergenic | 35.0% |
| AATATGTGGTCACGATCATA+AGG | - | chr6_1:71231379-71231398 | None:intergenic | 35.0% | |
| TTGAACGTCTTTAAATGTGC+AGG | + | chr6_1:71231410-71231429 | Msa0892230:intron | 35.0% | |
| TAAATGTGCAGGTAGGTAAA+AGG | + | chr6_1:71231421-71231440 | Msa0892230:intron | 35.0% | |
| AAATGTGCAGGTAGGTAAAA+GGG | + | chr6_1:71231422-71231441 | Msa0892230:intron | 35.0% | |
| AGGGTAGTTATGTTCTCATA+TGG | + | chr6_1:71231441-71231460 | Msa0892230:CDS | 35.0% | |
| GTTATGTTCTCATATGGAAG+TGG | + | chr6_1:71231447-71231466 | Msa0892230:CDS | 35.0% | |
| CACAATGTTCGACAAGTTAA+AGG | - | chr6_1:71231520-71231539 | None:intergenic | 35.0% | |
| TGGTAACTGCAATCAAAAGT+AGG | - | chr6_1:71231817-71231836 | None:intergenic | 35.0% | |
| ! | AAAATCATGGAGCACCATTA+TGG | + | chr6_1:71231861-71231880 | Msa0892230:CDS | 35.0% |
| GAAGTAAGTAGTTACAGTCT+TGG | - | chr6_1:71231908-71231927 | None:intergenic | 35.0% | |
| CCTATACATGGAATCAACTT+TGG | - | chr6_1:71231949-71231968 | None:intergenic | 35.0% | |
| ! | CCAAAGTTGATTCCATGTAT+AGG | + | chr6_1:71231946-71231965 | Msa0892230:CDS | 35.0% |
| AGCGTAAAATCTCCTATACA+TGG | - | chr6_1:71231961-71231980 | None:intergenic | 35.0% | |
| ! | CATAAGGCATCAAATACAGA+AGG | - | chr6_1:71232088-71232107 | None:intergenic | 35.0% |
| CTTCTGTATTTGATGCCTTA+TGG | + | chr6_1:71232086-71232105 | Msa0892230:three_prime_UTR | 35.0% | |
| CACATCGTACAACACAAACA+TGG | + | chr6_1:71222706-71222725 | Msa0892230:exon | 40.0% | |
| GGAAATAGATGTCTATAGCG+AGG | - | chr6_1:71222760-71222779 | None:intergenic | 40.0% | |
| CACAATTTCAACCACCCATT+TGG | - | chr6_1:71223012-71223031 | None:intergenic | 40.0% | |
| !!! | AACCTTTTTTTGGTGGTGTC+CGG | + | chr6_1:71223440-71223459 | Msa0892230:intron | 40.0% |
| CATAATATATGCAAGGTCCG+GGG | - | chr6_1:71223474-71223493 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr6_1:71223475-71223494 | None:intergenic | 40.0% | |
| GGGAAATATACCATTGGACT+TGG | + | chr6_1:71223658-71223677 | Msa0892230:CDS | 40.0% | |
| ATATACCATTGGACTTGGAC+AGG | + | chr6_1:71223663-71223682 | Msa0892230:CDS | 40.0% | |
| GATATGTGTCAGTGTCATGT+TGG | + | chr6_1:71223846-71223865 | Msa0892230:intron | 40.0% | |
| ACATCTTTGTAACACCGACA+CGG | - | chr6_1:71223886-71223905 | None:intergenic | 40.0% | |
| CTTGTTTGATGAAGCTGCAA+TGG | + | chr6_1:71224036-71224055 | Msa0892230:CDS | 40.0% | |
| TCCAAAGAAAATCGGTCGAT+TGG | + | chr6_1:71224153-71224172 | Msa0892230:CDS | 40.0% | |
| !! | TCCAATCGACCGATTTTCTT+TGG | - | chr6_1:71224157-71224176 | None:intergenic | 40.0% |
| AAAGAAAATCGGTCGATTGG+AGG | + | chr6_1:71224156-71224175 | Msa0892230:CDS | 40.0% | |
| TTGCATGAGGAAGGTCTTAA+TGG | - | chr6_1:71224215-71224234 | None:intergenic | 40.0% | |
| ATCCAGGAATTTCATCTTGC+TGG | - | chr6_1:71224431-71224450 | None:intergenic | 40.0% | |
| GCAAGATGAAATTCCTGGAT+CGG | + | chr6_1:71224431-71224450 | Msa0892230:intron | 40.0% | |
| TTTGTGAGATCTCTTGTCTC+TGG | + | chr6_1:71224460-71224479 | Msa0892230:intron | 40.0% | |
| CAAAAGAAGGGTCAAGATAC+AGG | - | chr6_1:71224602-71224621 | None:intergenic | 40.0% | |
| ! | CTGTATCTTGACCCTTCTTT+TGG | + | chr6_1:71224600-71224619 | Msa0892230:intron | 40.0% |
| ! | CTCAGTCTTGTACCAAAAGA+AGG | - | chr6_1:71224615-71224634 | None:intergenic | 40.0% |
| TCTTGCATATTTGAGTCCGA+AGG | + | chr6_1:71224663-71224682 | Msa0892230:intron | 40.0% | |
| AGCGGTAATACTGACATTGA+AGG | + | chr6_1:71224850-71224869 | Msa0892230:CDS | 40.0% | |
| ! | GATTCAACAAACGCTTGCTA+TGG | + | chr6_1:71224877-71224896 | Msa0892230:CDS | 40.0% |
| TAGCAAAAGAAAGTAGGCTG+AGG | - | chr6_1:71225032-71225051 | None:intergenic | 40.0% | |
| CTGCAATTGCAATGCTTGTA+GGG | + | chr6_1:71225198-71225217 | Msa0892230:CDS | 40.0% | |
| !! | TCAAAAGCAATAGGAGCATC+TGG | - | chr6_1:71225224-71225243 | None:intergenic | 40.0% |
| !! | GCTTTTGAAAGCAAACTACG+GGG | + | chr6_1:71225236-71225255 | Msa0892230:CDS | 40.0% |
| GGGTATTCACTTGCAAGATT+TGG | - | chr6_1:71225296-71225315 | None:intergenic | 40.0% | |
| !! | GAAGGTGGAAAAGCATTACT+GGG | - | chr6_1:71225316-71225335 | None:intergenic | 40.0% |
| !! | AGAAGGTGGAAAAGCATTAC+TGG | - | chr6_1:71225317-71225336 | None:intergenic | 40.0% |
| AAACAGACCCTAAGTGAAGT+TGG | - | chr6_1:71225419-71225438 | None:intergenic | 40.0% | |
| AACTTCACTTAGGGTCTGTT+TGG | + | chr6_1:71225418-71225437 | Msa0892230:intron | 40.0% | |
| ACGCTTCTATATTCCGAAAC+TGG | + | chr6_1:71225756-71225775 | Msa0892230:intron | 40.0% | |
| TCGAAACTTCACTCCAGTTT+CGG | - | chr6_1:71225772-71225791 | None:intergenic | 40.0% | |
| CTAACTGGCTAGATAACTTG+TGG | - | chr6_1:71225873-71225892 | None:intergenic | 40.0% | |
| ! | TGGGTATTTTGTATGTGGGT+TGG | - | chr6_1:71226176-71226195 | None:intergenic | 40.0% |
| !! | GGCATTGGGTATTTTGTATG+TGG | - | chr6_1:71226181-71226200 | None:intergenic | 40.0% |
| !! | GGGGGAGTATTGTTAGATAT+AGG | - | chr6_1:71226351-71226370 | None:intergenic | 40.0% |
| ! | ACAAGGTGAATCTTTAAGGG+GGG | - | chr6_1:71226369-71226388 | None:intergenic | 40.0% |
| ! | GACAAGGTGAATCTTTAAGG+GGG | - | chr6_1:71226370-71226389 | None:intergenic | 40.0% |
| GGACAAGGTGAATCTTTAAG+GGG | - | chr6_1:71226371-71226390 | None:intergenic | 40.0% | |
| GAGGACAAGGTGAATCTTTA+AGG | - | chr6_1:71226373-71226392 | None:intergenic | 40.0% | |
| AAAGATTCACCTTGTCCTCA+AGG | + | chr6_1:71226374-71226393 | Msa0892230:intron | 40.0% | |
| GATAACATATGTGTCCACCA+GGG | + | chr6_1:71226402-71226421 | Msa0892230:intron | 40.0% | |
| TCAAGGCTACTCTAGTAGTT+AGG | - | chr6_1:71226532-71226551 | None:intergenic | 40.0% | |
| TGTTGCTACAGCACAAAGTA+AGG | + | chr6_1:71226610-71226629 | Msa0892230:intron | 40.0% | |
| ! | CAGCACAATGAGAGTTTTTG+GGG | - | chr6_1:71226687-71226706 | None:intergenic | 40.0% |
| GATGACTCGATCACTTGAAA+TGG | - | chr6_1:71226768-71226787 | None:intergenic | 40.0% | |
| GGTTGCCAACCAATTACAAT+GGG | - | chr6_1:71226805-71226824 | None:intergenic | 40.0% | |
| !! | TTGATGATGTATTAGGCCCT+TGG | - | chr6_1:71226850-71226869 | None:intergenic | 40.0% |
| ! | TTTTATGAGCAGGAGGAACA+TGG | - | chr6_1:71226945-71226964 | None:intergenic | 40.0% |
| TAACTCCTTCACCTTTCACT+TGG | + | chr6_1:71227017-71227036 | Msa0892230:intron | 40.0% | |
| GAATTCCATCTCAAGGTCAT+TGG | - | chr6_1:71227075-71227094 | None:intergenic | 40.0% | |
| CAAACAGGAATTCCATCTCA+AGG | - | chr6_1:71227082-71227101 | None:intergenic | 40.0% | |
| ATTGATGAAGGGGCTCTTAA+AGG | - | chr6_1:71227152-71227171 | None:intergenic | 40.0% | |
| GGGTGAGAGAAATTAAAAGG+TGG | - | chr6_1:71227306-71227325 | None:intergenic | 40.0% | |
| AACAGTGGAACAAATTGGTC+AGG | - | chr6_1:71227388-71227407 | None:intergenic | 40.0% | |
| !! | TTCCACTGTTTTTCTCCTTC+TGG | + | chr6_1:71227398-71227417 | Msa0892230:intron | 40.0% |
| AACCAGAAGGAGAAAAACAG+TGG | - | chr6_1:71227403-71227422 | None:intergenic | 40.0% | |
| CCATTGGGTTATGAAAAAGG+GGG | - | chr6_1:71227446-71227465 | None:intergenic | 40.0% | |
| GCCATTGGGTTATGAAAAAG+GGG | - | chr6_1:71227447-71227466 | None:intergenic | 40.0% | |
| ! | AAGGTATTAGAAATGCGGAC+AGG | - | chr6_1:71227505-71227524 | None:intergenic | 40.0% |
| ACAGGGTCAATTGTTAAGGT+TGG | - | chr6_1:71227580-71227599 | None:intergenic | 40.0% | |
| GTGAGGTCAAAAGGATAACA+GGG | - | chr6_1:71227597-71227616 | None:intergenic | 40.0% | |
| TGTGAGGTCAAAAGGATAAC+AGG | - | chr6_1:71227598-71227617 | None:intergenic | 40.0% | |
| ATCTGCAGGTCACAATGAAT+CGG | - | chr6_1:71228031-71228050 | None:intergenic | 40.0% | |
| TGCATGGTACAAAAATCTGC+AGG | - | chr6_1:71228045-71228064 | None:intergenic | 40.0% | |
| GACACCATTCACAAAATGCA+TGG | - | chr6_1:71228061-71228080 | None:intergenic | 40.0% | |
| TATGAAGAGTCAAAGGAGGT+TGG | - | chr6_1:71228165-71228184 | None:intergenic | 40.0% | |
| TCTCATTCAGAACGTACTCA+TGG | + | chr6_1:71228196-71228215 | Msa0892230:intron | 40.0% | |
| GATATGCTTGAGTCTGCAAA+AGG | - | chr6_1:71228237-71228256 | None:intergenic | 40.0% | |
| GAAATTCATCCCAGACCTAT+GGG | - | chr6_1:71228259-71228278 | None:intergenic | 40.0% | |
| AGAAATTCATCCCAGACCTA+TGG | - | chr6_1:71228260-71228279 | None:intergenic | 40.0% | |
| !! | TGGTGGTCTTATTGGAAGAA+TGG | - | chr6_1:71228327-71228346 | None:intergenic | 40.0% |
| CTTCCAATAAGACCACCAAT+TGG | + | chr6_1:71228329-71228348 | Msa0892230:intron | 40.0% | |
| !! | CTTCCAATTGGTGGTCTTAT+TGG | - | chr6_1:71228335-71228354 | None:intergenic | 40.0% |
| GTTACTCTGTATGCTTTCAG+AGG | - | chr6_1:71228363-71228382 | None:intergenic | 40.0% | |
| AGAGAAAATGAAGGTCGACT+GGG | - | chr6_1:71228385-71228404 | None:intergenic | 40.0% | |
| GGTGGTTGATCCAGTTAAAA+CGG | - | chr6_1:71228434-71228453 | None:intergenic | 40.0% | |
| TAACTGGATCAACCACCAAT+AGG | + | chr6_1:71228437-71228456 | Msa0892230:intron | 40.0% | |
| ATGGAAAGGAAGATGCCTAT+TGG | - | chr6_1:71228455-71228474 | None:intergenic | 40.0% | |
| CTGATACCAGTGTTAGATAC+TGG | + | chr6_1:71228569-71228588 | Msa0892230:intron | 40.0% | |
| TCTGAACCAGTATCTAACAC+TGG | - | chr6_1:71228578-71228597 | None:intergenic | 40.0% | |
| ! | TGGGTATTTTGTATGTGGGT+TGG | - | chr6_1:71226176-71226195 | None:intergenic | 40.0% |
| !! | GGCATTGGGTATTTTGTATG+TGG | - | chr6_1:71226181-71226200 | None:intergenic | 40.0% |
| CAACAACCTACACGAGAAAA+AGG | - | chr6_1:71229123-71229142 | None:intergenic | 40.0% | |
| TTTCTCGTGTAGGTTGTTGA+CGG | + | chr6_1:71229124-71229143 | Msa0892230:intron | 40.0% | |
| ATCAAGTGCCATCAGATAAC+AGG | - | chr6_1:71229164-71229183 | None:intergenic | 40.0% | |
| ! | TGGCACTTGATTCTTGCTAT+CGG | + | chr6_1:71229173-71229192 | Msa0892230:CDS | 40.0% |
| ! | CGGGTGTTTTGTGAAAAGTA+AGG | + | chr6_1:71229193-71229212 | Msa0892230:intron | 40.0% |
| ATGACTTCCTCAGAAATCCT+AGG | + | chr6_1:71229716-71229735 | Msa0892230:intron | 40.0% | |
| AGCAAAAGATCCACAAACCT+AGG | - | chr6_1:71229736-71229755 | None:intergenic | 40.0% | |
| !! | GCCATTTTCACAAGTTATCC+TGG | - | chr6_1:71229883-71229902 | None:intergenic | 40.0% |
| ! | CTAAAGAATGCACCACCTTT+TGG | - | chr6_1:71230074-71230093 | None:intergenic | 40.0% |
| AGTTCGCTAATATTACAGGG+GGG | - | chr6_1:71230266-71230285 | None:intergenic | 40.0% | |
| GAGTTCGCTAATATTACAGG+GGG | - | chr6_1:71230267-71230286 | None:intergenic | 40.0% | |
| GGAGTTCGCTAATATTACAG+GGG | - | chr6_1:71230268-71230287 | None:intergenic | 40.0% | |
| CGGAGTTCGCTAATATTACA+GGG | - | chr6_1:71230269-71230288 | None:intergenic | 40.0% | |
| CCTGTAATATTAGCGAACTC+CGG | + | chr6_1:71230267-71230286 | Msa0892230:intron | 40.0% | |
| TTACAGGGTTGGAATTACAG+GGG | - | chr6_1:71230299-71230318 | None:intergenic | 40.0% | |
| AATGTCAATGATATGGCAGG+GGG | + | chr6_1:71230394-71230413 | Msa0892230:intron | 40.0% | |
| CCGAAATTCGCTCAAATTAC+AGG | + | chr6_1:71230422-71230441 | Msa0892230:intron | 40.0% | |
| !! | TCATGTACTCCTGGTTTTCT+TGG | - | chr6_1:71230644-71230663 | None:intergenic | 40.0% |
| CGAAACCTCATCAACAAAAC+TGG | - | chr6_1:71230749-71230768 | None:intergenic | 40.0% | |
| !! | GTTTTGTTGATGAGGTTTCG+AGG | + | chr6_1:71230749-71230768 | Msa0892230:intron | 40.0% |
| ! | ACTTTGATAGCTCTCATCAC+CGG | - | chr6_1:71230803-71230822 | None:intergenic | 40.0% |
| CTAGCATCTAAGTTCGTGTT+TGG | - | chr6_1:71231155-71231174 | None:intergenic | 40.0% | |
| AACACGAACTTAGATGCTAG+CGG | + | chr6_1:71231155-71231174 | Msa0892230:intron | 40.0% | |
| ACGTTAATCCCAAAGCAAGT+TGG | + | chr6_1:71231246-71231265 | Msa0892230:CDS | 40.0% | |
| ! | ACATGTTGCCAACTTGCTTT+GGG | - | chr6_1:71231257-71231276 | None:intergenic | 40.0% |
| ! | TACATGTTGCCAACTTGCTT+TGG | - | chr6_1:71231258-71231277 | None:intergenic | 40.0% |
| TGATCGTGACCACATATTAG+AGG | + | chr6_1:71231381-71231400 | Msa0892230:intron | 40.0% | |
| ACGTCTTTAAATGTGCAGGT+AGG | + | chr6_1:71231414-71231433 | Msa0892230:intron | 40.0% | |
| GTGACAGTGATGAATGTTTC+TGG | + | chr6_1:71231537-71231556 | Msa0892230:CDS | 40.0% | |
| TACACGAAGCGGTATAAAAG+TGG | - | chr6_1:71231599-71231618 | None:intergenic | 40.0% | |
| CAAAGTCCTTTCCACCATAA+TGG | - | chr6_1:71231878-71231897 | None:intergenic | 40.0% | |
| GACTGTAACTACTTACTTCC+AGG | + | chr6_1:71231909-71231928 | Msa0892230:CDS | 40.0% | |
| TCTTCACTCCCCAACAATGT+TGG | + | chr6_1:71222731-71222750 | Msa0892230:CDS | 45.0% | |
| CGAGGATTCCAACATTGTTG+GGG | - | chr6_1:71222742-71222761 | None:intergenic | 45.0% | |
| GCGAGGATTCCAACATTGTT+GGG | - | chr6_1:71222743-71222762 | None:intergenic | 45.0% | |
| AGCGAGGATTCCAACATTGT+TGG | - | chr6_1:71222744-71222763 | None:intergenic | 45.0% | |
| ! | GTTTTTGTTGGCCAAATGGG+TGG | + | chr6_1:71222998-71223017 | Msa0892230:intron | 45.0% |
| TGTTCCACATTCGTCGTGTT+CGG | + | chr6_1:71223270-71223289 | Msa0892230:intron | 45.0% | |
| !!! | ACCTTTTTTTGGTGGTGTCC+GGG | + | chr6_1:71223441-71223460 | Msa0892230:intron | 45.0% |
| TACCAACTGAGCTAAGCTCA+GGG | + | chr6_1:71223503-71223522 | Msa0892230:intron | 45.0% | |
| !! | GAAGCTTTGGAAGCTCATGA+TGG | + | chr6_1:71223625-71223644 | Msa0892230:CDS | 45.0% |
| ! | CTCATGATGGTGTGAGCAAA+GGG | + | chr6_1:71223638-71223657 | Msa0892230:CDS | 45.0% |
| CTGTATGGCATTCTGTACTG+AGG | + | chr6_1:71223687-71223706 | Msa0892230:intron | 45.0% | |
| TGTCAGTGTCATGTTGGTGT+CGG | + | chr6_1:71223852-71223871 | Msa0892230:intron | 45.0% | |
| CATCTTTGTAACACCGACAC+GGG | - | chr6_1:71223885-71223904 | None:intergenic | 45.0% | |
| AAAATCGGTCGATTGGAGGT+AGG | + | chr6_1:71224160-71224179 | Msa0892230:CDS | 45.0% | |
| CTCCAGCAAGATGAAATTCC+TGG | + | chr6_1:71224426-71224445 | Msa0892230:intron | 45.0% | |
| TTGGTACAAGACTGAGTGAC+TGG | + | chr6_1:71224619-71224638 | Msa0892230:intron | 45.0% | |
| !! | TCAACAAACGCTTGCTATGG+TGG | + | chr6_1:71224880-71224899 | Msa0892230:CDS | 45.0% |
| ATTGGGTGGAGAGTAGTTCA+TGG | + | chr6_1:71224929-71224948 | Msa0892230:CDS | 45.0% | |
| TTGGGTGGAGAGTAGTTCAT+GGG | + | chr6_1:71224930-71224949 | Msa0892230:CDS | 45.0% | |
| TGTTGTATGCACAGACAGTG+CGG | + | chr6_1:71224969-71224988 | Msa0892230:CDS | 45.0% | |
| GCTGCAATTGCAATGCTTGT+AGG | + | chr6_1:71225197-71225216 | Msa0892230:CDS | 45.0% | |
| CAGAAAGGTAACCAACCTCT+AGG | + | chr6_1:71226124-71226143 | Msa0892230:intron | 45.0% | |
| AAGATGCAGAGGAAAAGGGT+GGG | - | chr6_1:71226202-71226221 | None:intergenic | 45.0% | |
| AAAGATGCAGAGGAAAAGGG+TGG | - | chr6_1:71226203-71226222 | None:intergenic | 45.0% | |
| TATCCTTCACCTTGAGGACA+AGG | - | chr6_1:71226386-71226405 | None:intergenic | 45.0% | |
| GGATAACATATGTGTCCACC+AGG | + | chr6_1:71226401-71226420 | Msa0892230:intron | 45.0% | |
| ! | TACTTCAAGTTATGGGACCC+TGG | - | chr6_1:71226422-71226441 | None:intergenic | 45.0% |
| !!! | ACGGCTGTTTTTCTAGTGGT+CGG | - | chr6_1:71226461-71226480 | None:intergenic | 45.0% |
| ATTCTCTCATCTCAGCCTTG+AGG | - | chr6_1:71226486-71226505 | None:intergenic | 45.0% | |
| CAAGGCTGAGATGAGAGAAT+TGG | + | chr6_1:71226486-71226505 | Msa0892230:intron | 45.0% | |
| CTTGCAAGCTACTTGTGTCA+AGG | - | chr6_1:71226549-71226568 | None:intergenic | 45.0% | |
| CACAAAGTAAGGCGACAACT+AGG | + | chr6_1:71226621-71226640 | Msa0892230:intron | 45.0% | |
| TAAGGCGACAACTAGGACAA+TGG | + | chr6_1:71226628-71226647 | Msa0892230:intron | 45.0% | |
| AAAACCGAGTCATTTCCTCC+AGG | + | chr6_1:71226716-71226735 | Msa0892230:intron | 45.0% | |
| ! | TCACTTGAAATGGGCTTGTC+CGG | - | chr6_1:71226758-71226777 | None:intergenic | 45.0% |
| ACAATGGGAGTGGAATTGTG+TGG | - | chr6_1:71226790-71226809 | None:intergenic | 45.0% | |
| CCAACCAATTACAATGGGAG+TGG | - | chr6_1:71226800-71226819 | None:intergenic | 45.0% | |
| CCACTCCCATTGTAATTGGT+TGG | + | chr6_1:71226797-71226816 | Msa0892230:intron | 45.0% | |
| CGGTTGCCAACCAATTACAA+TGG | - | chr6_1:71226806-71226825 | None:intergenic | 45.0% | |
| ! | GATCTCTTCAATGGTGGTGA+TGG | - | chr6_1:71226879-71226898 | None:intergenic | 45.0% |
| GAGGAACATGGAAGTGGAAA+GGG | - | chr6_1:71226933-71226952 | None:intergenic | 45.0% | |
| ! | TGTTTTGTGCTTGACCCACT+AGG | + | chr6_1:71227338-71227357 | Msa0892230:intron | 45.0% |
| TTGGGTTATGAAAAAGGGGG+TGG | - | chr6_1:71227443-71227462 | None:intergenic | 45.0% | |
| !! | CCCCCTTTTTCATAACCCAA+TGG | + | chr6_1:71227443-71227462 | Msa0892230:intron | 45.0% |
| CGGACAGGAATAGAGTTACT+AGG | - | chr6_1:71227490-71227509 | None:intergenic | 45.0% | |
| GGAAGGATTGTGAGGTCAAA+AGG | - | chr6_1:71227606-71227625 | None:intergenic | 45.0% | |
| TTCAGTTGGGAAGGATTGTG+AGG | - | chr6_1:71227614-71227633 | None:intergenic | 45.0% | |
| GTTTCAACGTCGCTTCAGTT+GGG | - | chr6_1:71227627-71227646 | None:intergenic | 45.0% | |
| TGGCATCAACCAACTTGCAA+TGG | - | chr6_1:71227698-71227717 | None:intergenic | 45.0% | |
| !! | ATTGCAAGTTGGTTGATGCC+AGG | + | chr6_1:71227697-71227716 | Msa0892230:intron | 45.0% |
| CTTCAGATGCAACAAGAGAC+AGG | - | chr6_1:71227801-71227820 | None:intergenic | 45.0% | |
| AAAGAGGTGAGAAGGAGAGA+AGG | - | chr6_1:71227966-71227985 | None:intergenic | 45.0% | |
| TGAGACACAAAGAGGTGAGA+AGG | - | chr6_1:71227974-71227993 | None:intergenic | 45.0% | |
| ! | GTTGGTAAGGAGACAAACTC+TGG | - | chr6_1:71228147-71228166 | None:intergenic | 45.0% |
| !! | AGAGTCAAAGGAGGTTGGTA+AGG | - | chr6_1:71228160-71228179 | None:intergenic | 45.0% |
| CAGACTCAAGCATATCCCAT+AGG | + | chr6_1:71228241-71228260 | Msa0892230:intron | 45.0% | |
| TCAAGCATATCCCATAGGTC+TGG | + | chr6_1:71228246-71228265 | Msa0892230:intron | 45.0% | |
| CAAGCATATCCCATAGGTCT+GGG | + | chr6_1:71228247-71228266 | Msa0892230:intron | 45.0% | |
| TCAGAGGAGAAGCTTCCAAT+TGG | - | chr6_1:71228347-71228366 | None:intergenic | 45.0% | |
| CAGAGAAAATGAAGGTCGAC+TGG | - | chr6_1:71228386-71228405 | None:intergenic | 45.0% | |
| GAAAGGAAGATGCCTATTGG+TGG | - | chr6_1:71228452-71228471 | None:intergenic | 45.0% | |
| AGAGTGAGAGCCAATGATGT+TGG | - | chr6_1:71228499-71228518 | None:intergenic | 45.0% | |
| CAGAAAGGTAACCAACCTCT+AGG | + | chr6_1:71226124-71226143 | Msa0892230:intron | 45.0% | |
| AAGATGCAGAGGAAAAGGGT+GGG | - | chr6_1:71226202-71226221 | None:intergenic | 45.0% | |
| AAAGATGCAGAGGAAAAGGG+TGG | - | chr6_1:71226203-71226222 | None:intergenic | 45.0% | |
| CTCACAGACCTGTTATCTGA+TGG | + | chr6_1:71229153-71229172 | Msa0892230:CDS | 45.0% | |
| ! | GGCACTTGATTCTTGCTATC+GGG | + | chr6_1:71229174-71229193 | Msa0892230:CDS | 45.0% |
| !!! | GGAGGGGAAGCATTTTTCAA+TGG | + | chr6_1:71229290-71229309 | Msa0892230:CDS | 45.0% |
| !!! | GGGGAAGCATTTTTCAATGG+TGG | + | chr6_1:71229293-71229312 | Msa0892230:CDS | 45.0% |
| CCACAAACCTAGGATTTCTG+AGG | - | chr6_1:71229726-71229745 | None:intergenic | 45.0% | |
| CCTCAGAAATCCTAGGTTTG+TGG | + | chr6_1:71229723-71229742 | Msa0892230:intron | 45.0% | |
| TATGAACTTGTGAGGCTGCT+TGG | + | chr6_1:71229814-71229833 | Msa0892230:intron | 45.0% | |
| ATGAACTTGTGAGGCTGCTT+GGG | + | chr6_1:71229815-71229834 | Msa0892230:intron | 45.0% | |
| AGGCTGCTTGGGAGAAATTA+CGG | + | chr6_1:71229826-71229845 | Msa0892230:intron | 45.0% | |
| CCGGAGTTCGCTAATATTAC+AGG | - | chr6_1:71230270-71230289 | None:intergenic | 45.0% | |
| TACAGGGTTGGAATTACAGG+GGG | - | chr6_1:71230298-71230317 | None:intergenic | 45.0% | |
| CTAACTGCTCCAAGAAAACC+AGG | + | chr6_1:71230632-71230651 | Msa0892230:intron | 45.0% | |
| GCACCTTATGCATCCTTAAC+CGG | + | chr6_1:71230781-71230800 | Msa0892230:CDS | 45.0% | |
| ! | TCACCGGTTAAGGATGCATA+AGG | - | chr6_1:71230787-71230806 | None:intergenic | 45.0% |
| ! | ATAGCTCTCATCACCGGTTA+AGG | - | chr6_1:71230797-71230816 | None:intergenic | 45.0% |
| !! | TGCTTTGGGATTAACGTGCT+TGG | - | chr6_1:71231243-71231262 | None:intergenic | 45.0% |
| GTGAGTCGTGCTTATTGTGA+AGG | - | chr6_1:71231314-71231333 | None:intergenic | 45.0% | |
| TCACAATAAGCACGACTCAC+TGG | + | chr6_1:71231314-71231333 | Msa0892230:CDS | 45.0% | |
| ATAAGCACGACTCACTGGTA+TGG | + | chr6_1:71231319-71231338 | Msa0892230:intron | 45.0% | |
| TGTGGTCACGATCATAAGGA+AGG | - | chr6_1:71231375-71231394 | None:intergenic | 45.0% | |
| CAATGTCGGCCTCTAATATG+TGG | - | chr6_1:71231393-71231412 | None:intergenic | 45.0% | |
| GATGTTGACCTTCTTGAAGG+CGG | - | chr6_1:71231497-71231516 | None:intergenic | 45.0% | |
| AGGGATGTTGACCTTCTTGA+AGG | - | chr6_1:71231500-71231519 | None:intergenic | 45.0% | |
| ! | CAAGTTGAAGCAGAGAGTTG+AGG | + | chr6_1:71231560-71231579 | Msa0892230:CDS | 45.0% |
| AATGTGATCGCTACACGAAG+CGG | - | chr6_1:71231610-71231629 | None:intergenic | 45.0% | |
| ! | ATCATGGAGCACCATTATGG+TGG | + | chr6_1:71231864-71231883 | Msa0892230:CDS | 45.0% |
| TTGGTGAGATAGAATGTGCC+TGG | - | chr6_1:71231930-71231949 | None:intergenic | 45.0% | |
| CCTGTTGAACACAAGTGGGA+GGG | - | chr6_1:71222781-71222800 | None:intergenic | 50.0% | |
| ACCTGTTGAACACAAGTGGG+AGG | - | chr6_1:71222782-71222801 | None:intergenic | 50.0% | |
| TGTGGAACACCAGGACATGT+CGG | - | chr6_1:71223259-71223278 | None:intergenic | 50.0% | |
| !!! | CCTTTTTTTGGTGGTGTCCG+GGG | + | chr6_1:71223442-71223461 | Msa0892230:intron | 50.0% |
| CTGAGCTTAGCTCAGTTGGT+AGG | - | chr6_1:71223504-71223523 | None:intergenic | 50.0% | |
| CTACCAACTGAGCTAAGCTC+AGG | + | chr6_1:71223502-71223521 | Msa0892230:intron | 50.0% | |
| ACCAACTGAGCTAAGCTCAG+GGG | + | chr6_1:71223504-71223523 | Msa0892230:intron | 50.0% | |
| ! | GCTCATGATGGTGTGAGCAA+AGG | + | chr6_1:71223637-71223656 | Msa0892230:CDS | 50.0% |
| ACAGTCCTGTCCAAGTCCAA+TGG | - | chr6_1:71223671-71223690 | None:intergenic | 50.0% | |
| TGGACTTGGACAGGACTGTA+TGG | + | chr6_1:71223672-71223691 | Msa0892230:intron | 50.0% | |
| TTTGTAACACCGACACGGGT+CGG | - | chr6_1:71223881-71223900 | None:intergenic | 50.0% | |
| GCTGATCACTGAAGCTAGCT+TGG | + | chr6_1:71224007-71224026 | Msa0892230:intron | 50.0% | |
| TCACAAACAGAGACCGATCC+AGG | - | chr6_1:71224447-71224466 | None:intergenic | 50.0% | |
| GTGGAGAGTAGTTCATGGGA+TGG | + | chr6_1:71224934-71224953 | Msa0892230:CDS | 50.0% | |
| AGTTCATGGGATGGACGCTA+CGG | + | chr6_1:71224943-71224962 | Msa0892230:CDS | 50.0% | |
| TCAGGTATATGCCGAAGGAC+CGG | + | chr6_1:71225154-71225173 | Msa0892230:intron | 50.0% | |
| AAGTCATGTCCTCAACGCGT+CGG | + | chr6_1:71225720-71225739 | Msa0892230:intron | 50.0% | |
| GCTCTCTAACTCCTAGAGGT+TGG | - | chr6_1:71226138-71226157 | None:intergenic | 50.0% | |
| CTAGGCTCTCTAACTCCTAG+AGG | - | chr6_1:71226142-71226161 | None:intergenic | 50.0% | |
| AGAGGAAAAGGGTGGGCATT+GGG | - | chr6_1:71226195-71226214 | None:intergenic | 50.0% | |
| TCACCTTGTCCTCAAGGTGA+AGG | + | chr6_1:71226380-71226399 | Msa0892230:intron | 50.0% | |
| ! | TTCAAGTTATGGGACCCTGG+TGG | - | chr6_1:71226419-71226438 | None:intergenic | 50.0% |
| !!! | GGACACGGCTGTTTTTCTAG+TGG | - | chr6_1:71226465-71226484 | None:intergenic | 50.0% |
| GAAAAACAGCCGTGTCCTCA+AGG | + | chr6_1:71226468-71226487 | Msa0892230:intron | 50.0% | |
| TCATCTCAGCCTTGAGGACA+CGG | - | chr6_1:71226480-71226499 | None:intergenic | 50.0% | |
| GGATCCTGGAGGAAATGACT+CGG | - | chr6_1:71226723-71226742 | None:intergenic | 50.0% | |
| TTCCTCCAGGATCCCATTGA+TGG | + | chr6_1:71226729-71226748 | Msa0892230:intron | 50.0% | |
| TCCTCCAGGATCCCATTGAT+GGG | + | chr6_1:71226730-71226749 | Msa0892230:intron | 50.0% | |
| GGAGGAACATGGAAGTGGAA+AGG | - | chr6_1:71226934-71226953 | None:intergenic | 50.0% | |
| CTGCTCCAATGACCTTGAGA+TGG | + | chr6_1:71227067-71227086 | Msa0892230:intron | 50.0% | |
| CGTTTCAACGTCGCTTCAGT+TGG | - | chr6_1:71227628-71227647 | None:intergenic | 50.0% | |
| CTTTCCCTTCCTCCTTGGAT+CGG | + | chr6_1:71227773-71227792 | Msa0892230:intron | 50.0% | |
| TTTCCCTTCCTCCTTGGATC+GGG | + | chr6_1:71227774-71227793 | Msa0892230:intron | 50.0% | |
| GCATCTGAAGACGACCAATC+CGG | + | chr6_1:71227811-71227830 | Msa0892230:intron | 50.0% | |
| ! | GGTGGTGGTGATTGTGATGA+AGG | + | chr6_1:71227898-71227917 | Msa0892230:intron | 50.0% |
| GGTGGTGATTGTGATGAAGG+CGG | + | chr6_1:71227901-71227920 | Msa0892230:intron | 50.0% | |
| GATTGTGATGAAGGCGGATC+TGG | + | chr6_1:71227907-71227926 | Msa0892230:intron | 50.0% | |
| GCAGCAACTGAGACACAAAG+AGG | - | chr6_1:71227982-71228001 | None:intergenic | 50.0% | |
| TGCAGGTCACAATGAATCGG+TGG | - | chr6_1:71228028-71228047 | None:intergenic | 50.0% | |
| AATTCCTGATGTGACCGCTC+TGG | + | chr6_1:71228087-71228106 | Msa0892230:intron | 50.0% | |
| ! | GGATCGCTGCTTAGTTTGAG+CGG | - | chr6_1:71228126-71228145 | None:intergenic | 50.0% |
| ATGGCAATCAGAATGCCACG+TGG | - | chr6_1:71228308-71228327 | None:intergenic | 50.0% | |
| GAGGAGAAGCTTCCAATTGG+TGG | - | chr6_1:71228344-71228363 | None:intergenic | 50.0% | |
| GCTCTCTAACTCCTAGAGGT+TGG | - | chr6_1:71226138-71226157 | None:intergenic | 50.0% | |
| CTAGGCTCTCTAACTCCTAG+AGG | - | chr6_1:71226142-71226161 | None:intergenic | 50.0% | |
| AGAGGAAAAGGGTGGGCATT+GGG | - | chr6_1:71226195-71226214 | None:intergenic | 50.0% | |
| GGAATTACAGGGGGGTAAAC+CGG | - | chr6_1:71230289-71230308 | None:intergenic | 50.0% | |
| ACAGGGTTGGAATTACAGGG+GGG | - | chr6_1:71230297-71230316 | None:intergenic | 50.0% | |
| AGCGGTCGTTGTGATTCTGT+AGG | + | chr6_1:71231173-71231192 | Msa0892230:intron | 50.0% | |
| TTCTCCTTCCGCCTTCAAGA+AGG | + | chr6_1:71231486-71231505 | Msa0892230:CDS | 50.0% | |
| TTGACCTTCTTGAAGGCGGA+AGG | - | chr6_1:71231493-71231512 | None:intergenic | 50.0% | |
| ! | GGAGCACCATTATGGTGGAA+AGG | + | chr6_1:71231869-71231888 | Msa0892230:CDS | 50.0% |
| GGTGGAAAGGACTTTGTGAC+TGG | + | chr6_1:71231882-71231901 | Msa0892230:CDS | 50.0% | |
| CCCTCCCACTTGTGTTCAAC+AGG | + | chr6_1:71222778-71222797 | Msa0892230:CDS | 55.0% | |
| ! | TCTGATGCACCGACATGTCC+TGG | + | chr6_1:71223247-71223266 | Msa0892230:intron | 55.0% |
| CACGACGAATGTGGAACACC+AGG | - | chr6_1:71223268-71223287 | None:intergenic | 55.0% | |
| CGAACCGAACACGACGAATG+TGG | - | chr6_1:71223277-71223296 | None:intergenic | 55.0% | |
| ! | TCGTCGTGTTCGGTTCGACA+CGG | + | chr6_1:71223280-71223299 | Msa0892230:intron | 55.0% |
| CCCCGGACACCACCAAAAAA+AGG | - | chr6_1:71223445-71223464 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCAGG+GGG | + | chr6_1:71223505-71223524 | Msa0892230:intron | 55.0% | |
| ATTGCAGCTGCTCCTCCAGT+AGG | - | chr6_1:71225185-71225204 | None:intergenic | 55.0% | |
| !! | GGGTTGGTTTGGGAGAGACT+AGG | - | chr6_1:71226160-71226179 | None:intergenic | 55.0% |
| CAGAGGAAAAGGGTGGGCAT+TGG | - | chr6_1:71226196-71226215 | None:intergenic | 55.0% | |
| TCCCATCAATGGGATCCTGG+AGG | - | chr6_1:71226734-71226753 | None:intergenic | 55.0% | |
| AGGATCCCATTGATGGGAGC+CGG | + | chr6_1:71226736-71226755 | Msa0892230:intron | 55.0% | |
| CTTGTCCGGCTCCCATCAAT+GGG | - | chr6_1:71226744-71226763 | None:intergenic | 55.0% | |
| GAGCAGGAGGAACATGGAAG+TGG | - | chr6_1:71226939-71226958 | None:intergenic | 55.0% | |
| CAACGTCGCTTCAGTTGGGA+AGG | - | chr6_1:71227623-71227642 | None:intergenic | 55.0% | |
| ! | GCAAGTGTGTTGCTCGTCGT+CGG | + | chr6_1:71227661-71227680 | Msa0892230:intron | 55.0% |
| GCGGTCGAACCATTGCAAGT+TGG | + | chr6_1:71227686-71227705 | Msa0892230:intron | 55.0% | |
| !! | GCAAGTTGGTTGATGCCAGG+CGG | + | chr6_1:71227700-71227719 | Msa0892230:intron | 55.0% |
| TGGCTCTTTCCCTTCCTCCT+TGG | + | chr6_1:71227768-71227787 | Msa0892230:intron | 55.0% | |
| TTCCCTTCCTCCTTGGATCG+GGG | + | chr6_1:71227775-71227794 | Msa0892230:intron | 55.0% | |
| TCTGAAGACGACCAATCCGG+TGG | + | chr6_1:71227814-71227833 | Msa0892230:intron | 55.0% | |
| AGACGACCAATCCGGTGGTT+TGG | + | chr6_1:71227819-71227838 | Msa0892230:intron | 55.0% | |
| GACGACCAATCCGGTGGTTT+GGG | + | chr6_1:71227820-71227839 | Msa0892230:intron | 55.0% | |
| CACCTGCGACAGATCTCCAA+CGG | - | chr6_1:71227858-71227877 | None:intergenic | 55.0% | |
| GGACTAGAGTCTAGCGACTC+TGG | + | chr6_1:71227877-71227896 | Msa0892230:intron | 55.0% | |
| CTAGAGTCTAGCGACTCTGG+TGG | + | chr6_1:71227880-71227899 | Msa0892230:intron | 55.0% | |
| GCTTGAGTCTGCAAAAGGCG+AGG | - | chr6_1:71228232-71228251 | None:intergenic | 55.0% | |
| !! | GGGTTGGTTTGGGAGAGACT+AGG | - | chr6_1:71226160-71226179 | None:intergenic | 55.0% |
| CAGAGGAAAAGGGTGGGCAT+TGG | - | chr6_1:71226196-71226215 | None:intergenic | 55.0% | |
| GCGGAAGGAGAACATCGTAG+AGG | - | chr6_1:71231478-71231497 | None:intergenic | 55.0% | |
| CCCCCTGAGCTTAGCTCAGT+TGG | - | chr6_1:71223508-71223527 | None:intergenic | 60.0% | |
| ! | CGACGTGTCAGTGTCGAGTC+TGG | - | chr6_1:71223784-71223803 | None:intergenic | 60.0% |
| CGACACTGACACGTCGACAC+TGG | + | chr6_1:71223788-71223807 | Msa0892230:intron | 60.0% | |
| AGTAGGACGAGCCGGTCCTT+CGG | - | chr6_1:71225168-71225187 | None:intergenic | 60.0% | |
| ! | TTTTCGGCTCCGACGCGTTG+AGG | - | chr6_1:71225732-71225751 | None:intergenic | 60.0% |
| GGCTCCCATCAATGGGATCC+TGG | - | chr6_1:71226737-71226756 | None:intergenic | 60.0% | |
| GCTTGTCCGGCTCCCATCAA+TGG | - | chr6_1:71226745-71226764 | None:intergenic | 60.0% | |
| ! | GTGTTGCTCGTCGTCGGTAG+CGG | + | chr6_1:71227667-71227686 | Msa0892230:intron | 60.0% |
| ! | TGGTTGATGCCAGGCGGTTC+CGG | + | chr6_1:71227706-71227725 | Msa0892230:intron | 60.0% |
| AAGAGACAGGCCCCGATCCA+AGG | - | chr6_1:71227788-71227807 | None:intergenic | 60.0% | |
| ! | GACCAATCCGGTGGTTTGGG+TGG | + | chr6_1:71227823-71227842 | Msa0892230:intron | 60.0% |
| ! | CAATCCGGTGGTTTGGGTGG+CGG | + | chr6_1:71227826-71227845 | Msa0892230:intron | 60.0% |
| AGAACCGCCACCCAAACCAC+CGG | - | chr6_1:71227833-71227852 | None:intergenic | 60.0% | |
| CTCCGTTGGAGATCTGTCGC+AGG | + | chr6_1:71227853-71227872 | Msa0892230:intron | 60.0% | |
| CGTTGGAGATCTGTCGCAGG+TGG | + | chr6_1:71227856-71227875 | Msa0892230:intron | 60.0% | |
| GAGTCTAGCGACTCTGGTGG+TGG | + | chr6_1:71227883-71227902 | Msa0892230:intron | 60.0% | |
| GAAGGCGGATCTGGTGTCTC+CGG | + | chr6_1:71227916-71227935 | Msa0892230:intron | 60.0% | |
| GATCTGGTGTCTCCGGTGGA+GGG | + | chr6_1:71227923-71227942 | Msa0892230:intron | 60.0% | |
| TCCTGATGTGACCGCTCTGG+TGG | + | chr6_1:71228090-71228109 | Msa0892230:intron | 60.0% | |
| ACCACCAGAGCGGTCACATC+AGG | - | chr6_1:71228094-71228113 | None:intergenic | 60.0% | |
| TGATGTGACCGCTCTGGTGG+TGG | + | chr6_1:71228093-71228112 | Msa0892230:intron | 60.0% | |
| GCATCGAACCACCACCAGAG+CGG | - | chr6_1:71228104-71228123 | None:intergenic | 60.0% | |
| AAGGTCCGGGGTTCGAACCC+CGG | - | chr6_1:71223462-71223481 | None:intergenic | 65.0% | |
| TGTCGGACACCGACCCGTGT+CGG | + | chr6_1:71223869-71223888 | Msa0892230:intron | 65.0% | |
| !! | GAAGGACCGGCTCGTCCTAC+TGG | + | chr6_1:71225167-71225186 | Msa0892230:CDS | 65.0% |
| GCTCCTCCAGTAGGACGAGC+CGG | - | chr6_1:71225176-71225195 | None:intergenic | 65.0% | |
| CTGAAATGGCCGGAACCGCC+TGG | - | chr6_1:71227718-71227737 | None:intergenic | 65.0% | |
| GGCCCCGATCCAAGGAGGAA+GGG | - | chr6_1:71227780-71227799 | None:intergenic | 65.0% | |
| AGGCCCCGATCCAAGGAGGA+AGG | - | chr6_1:71227781-71227800 | None:intergenic | 65.0% | |
| AGACAGGCCCCGATCCAAGG+AGG | - | chr6_1:71227785-71227804 | None:intergenic | 65.0% | |
| CGCCACCCAAACCACCGGAT+TGG | - | chr6_1:71227828-71227847 | None:intergenic | 65.0% | |
| ! | TGGGTGGCGGTTCTCTCCGT+TGG | + | chr6_1:71227839-71227858 | Msa0892230:intron | 65.0% |
| GGATCTGGTGTCTCCGGTGG+AGG | + | chr6_1:71227922-71227941 | Msa0892230:intron | 65.0% | |
| ! | CTCCGGTGGAGGGTGCAGAT+CGG | + | chr6_1:71227933-71227952 | Msa0892230:intron | 65.0% |
| ! | TCCGGTGGAGGGTGCAGATC+GGG | + | chr6_1:71227934-71227953 | Msa0892230:intron | 65.0% |
| TCCCGATCTGCACCCTCCAC+CGG | - | chr6_1:71227938-71227957 | None:intergenic | 65.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr6_1:71223454-71223473 | Msa0892230:intron | 70.0% | |
| !! | GGACCGGCTCGTCCTACTGG+AGG | + | chr6_1:71225170-71225189 | Msa0892230:CDS | 70.0% |
| GGCGGATCTGGTGTCTCCGG+TGG | + | chr6_1:71227919-71227938 | Msa0892230:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 71222539 | 71232333 | 71222539 | ID=Msa0892230;Name=Msa0892230 |
| chr6_1 | mRNA | 71222539 | 71232333 | 71222539 | ID=Msa0892230-mRNA-1;Parent=Msa0892230;Name=Msa0892230-mRNA-1;_AED=0.12;_eAED=0.12;_QI=186|0.76|0.78|0.92|0.84|0.78|14|282|446 |
| chr6_1 | exon | 71222539 | 71222799 | 71222539 | ID=Msa0892230-mRNA-1:exon:12281;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71223625 | 71223688 | 71223625 | ID=Msa0892230-mRNA-1:exon:12282;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71224021 | 71224057 | 71224021 | ID=Msa0892230-mRNA-1:exon:12283;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71224111 | 71224243 | 71224111 | ID=Msa0892230-mRNA-1:exon:12284;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71224847 | 71224990 | 71224847 | ID=Msa0892230-mRNA-1:exon:12285;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71225158 | 71225316 | 71225158 | ID=Msa0892230-mRNA-1:exon:12286;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71229136 | 71229209 | 71229136 | ID=Msa0892230-mRNA-1:exon:12287;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71229278 | 71229353 | 71229278 | ID=Msa0892230-mRNA-1:exon:12288;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71229682 | 71229704 | 71229682 | ID=Msa0892230-mRNA-1:exon:12289;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71230750 | 71230837 | 71230750 | ID=Msa0892230-mRNA-1:exon:12290;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71231195 | 71231335 | 71231195 | ID=Msa0892230-mRNA-1:exon:12291;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71231432 | 71231581 | 71231432 | ID=Msa0892230-mRNA-1:exon:12292;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71231831 | 71232165 | 71231831 | ID=Msa0892230-mRNA-1:exon:12293;Parent=Msa0892230-mRNA-1 |
| chr6_1 | exon | 71232210 | 71232333 | 71232210 | ID=Msa0892230-mRNA-1:exon:12294;Parent=Msa0892230-mRNA-1 |
| chr6_1 | five_prime_UTR | 71222539 | 71222724 | 71222539 | ID=Msa0892230-mRNA-1:five_prime_utr;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71222725 | 71222799 | 71222725 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71223625 | 71223688 | 71223625 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71224021 | 71224057 | 71224021 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71224111 | 71224243 | 71224111 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71224847 | 71224990 | 71224847 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71225158 | 71225316 | 71225158 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71229136 | 71229209 | 71229136 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71229278 | 71229353 | 71229278 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71229682 | 71229704 | 71229682 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71230750 | 71230837 | 71230750 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71231195 | 71231335 | 71231195 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71231432 | 71231581 | 71231432 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | CDS | 71231831 | 71232007 | 71231831 | ID=Msa0892230-mRNA-1:cds;Parent=Msa0892230-mRNA-1 |
| chr6_1 | three_prime_UTR | 71232008 | 71232165 | 71232008 | ID=Msa0892230-mRNA-1:three_prime_utr;Parent=Msa0892230-mRNA-1 |
| chr6_1 | three_prime_UTR | 71232210 | 71232333 | 71232210 | ID=Msa0892230-mRNA-1:three_prime_utr;Parent=Msa0892230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
