Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466810 | XP_013460851.1 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 1.80e-75 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466810 | sp|Q9SGZ8|FLZ6_ARATH | 49.153 | 118 | 43 | 6 | 1 | 110 | 1 | 109 | 1.03e-25 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466810 | G8A369 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 8.59e-76 | 230 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa1466810 | 0.800387 | 1.476246e-48 | -8.615850e-47 |
| Msa0039330 | Msa1466810 | 0.824123 | 9.570667e-54 | -8.615850e-47 |
| Msa0101810 | Msa1466810 | -0.806149 | 9.461892e-50 | -8.615850e-47 |
| Msa1376890 | Msa1466810 | 0.881404 | 2.468759e-70 | -8.615850e-47 |
| Msa1378760 | Msa1466810 | 0.810723 | 1.000083e-50 | -8.615850e-47 |
| Msa1384350 | Msa1466810 | 0.810537 | 1.097535e-50 | -8.615850e-47 |
| Msa1393410 | Msa1466810 | 0.843769 | 1.142955e-58 | -8.615850e-47 |
| Msa1395530 | Msa1466810 | 0.806763 | 7.022385e-50 | -8.615850e-47 |
| Msa1413840 | Msa1466810 | 0.800445 | 1.436674e-48 | -8.615850e-47 |
| Msa1416140 | Msa1466810 | -0.817179 | 3.770873e-52 | -8.615850e-47 |
| Msa1435420 | Msa1466810 | 0.842915 | 1.931963e-58 | -8.615850e-47 |
| Msa1445610 | Msa1466810 | -0.810650 | 1.037220e-50 | -8.615850e-47 |
| Msa1451620 | Msa1466810 | -0.815420 | 9.331588e-52 | -8.615850e-47 |
| Msa1457670 | Msa1466810 | -0.804309 | 2.297670e-49 | -8.615850e-47 |
| Msa1459050 | Msa1466810 | 0.813466 | 2.523191e-51 | -8.615850e-47 |
| Msa1461810 | Msa1466810 | -0.816529 | 5.277457e-52 | -8.615850e-47 |
| Msa1465900 | Msa1466810 | 0.805991 | 1.021811e-49 | -8.615850e-47 |
| Msa0607540 | Msa1466810 | 0.805504 | 1.292944e-49 | -8.615850e-47 |
| Msa0625930 | Msa1466810 | 0.803192 | 3.919692e-49 | -8.615850e-47 |
| Msa0626280 | Msa1466810 | 0.815140 | 1.076719e-51 | -8.615850e-47 |
| Msa0647830 | Msa1466810 | 0.827711 | 1.345520e-54 | -8.615850e-47 |
| Msa0658570 | Msa1466810 | 0.887873 | 9.732770e-73 | -8.615850e-47 |
| Msa0659510 | Msa1466810 | 0.815778 | 7.765298e-52 | -8.615850e-47 |
| Msa0678820 | Msa1466810 | 0.812653 | 3.804068e-51 | -8.615850e-47 |
| Msa0690440 | Msa1466810 | 0.814981 | 1.168038e-51 | -8.615850e-47 |
| Msa0692620 | Msa1466810 | 0.802976 | 4.344047e-49 | -8.615850e-47 |
| Msa0703490 | Msa1466810 | 0.865049 | 7.824023e-65 | -8.615850e-47 |
| Msa0715720 | Msa1466810 | 0.822390 | 2.430918e-53 | -8.615850e-47 |
| Msa0723450 | Msa1466810 | 0.802243 | 6.152716e-49 | -8.615850e-47 |
| Msa0734340 | Msa1466810 | 0.808327 | 3.269886e-50 | -8.615850e-47 |
| Msa0740110 | Msa1466810 | -0.801187 | 1.013712e-48 | -8.615850e-47 |
| Msa0776030 | Msa1466810 | 0.816975 | 4.190194e-52 | -8.615850e-47 |
| Msa0782970 | Msa1466810 | 0.804908 | 1.723708e-49 | -8.615850e-47 |
| Msa0801710 | Msa1466810 | 0.800222 | 1.594937e-48 | -8.615850e-47 |
| Msa0802470 | Msa1466810 | -0.819347 | 1.218402e-52 | -8.615850e-47 |
| Msa0807030 | Msa1466810 | 0.811213 | 7.835624e-51 | -8.615850e-47 |
| Msa0190830 | Msa1466810 | 0.811262 | 7.646239e-51 | -8.615850e-47 |
| Msa0202880 | Msa1466810 | 0.801549 | 8.545481e-49 | -8.615850e-47 |
| Msa0204210 | Msa1466810 | 0.811747 | 5.998427e-51 | -8.615850e-47 |
| Msa0217400 | Msa1466810 | 0.826417 | 2.743596e-54 | -8.615850e-47 |
| Msa0226250 | Msa1466810 | 0.814336 | 1.622589e-51 | -8.615850e-47 |
| Msa0233190 | Msa1466810 | 0.800875 | 1.173549e-48 | -8.615850e-47 |
| Msa1228210 | Msa1466810 | 0.818797 | 1.625119e-52 | -8.615850e-47 |
| Msa1229600 | Msa1466810 | 0.833159 | 6.260339e-56 | -8.615850e-47 |
| Msa1239530 | Msa1466810 | 0.804165 | 2.462876e-49 | -8.615850e-47 |
| Msa1242220 | Msa1466810 | 0.818575 | 1.824675e-52 | -8.615850e-47 |
| Msa1246040 | Msa1466810 | 0.852081 | 5.833243e-61 | -8.615850e-47 |
| Msa1249940 | Msa1466810 | 0.807085 | 6.004819e-50 | -8.615850e-47 |
| Msa1271280 | Msa1466810 | 0.810845 | 9.412065e-51 | -8.615850e-47 |
| Msa1271300 | Msa1466810 | 0.845876 | 3.088589e-59 | -8.615850e-47 |
| Msa1283860 | Msa1466810 | 0.821947 | 3.078610e-53 | -8.615850e-47 |
| Msa1298910 | Msa1466810 | 0.810265 | 1.256325e-50 | -8.615850e-47 |
| Msa1310210 | Msa1466810 | 0.809954 | 1.465496e-50 | -8.615850e-47 |
| Msa1318240 | Msa1466810 | 0.808126 | 3.609301e-50 | -8.615850e-47 |
| Msa1322860 | Msa1466810 | 0.804660 | 1.942039e-49 | -8.615850e-47 |
| Msa1322890 | Msa1466810 | 0.843749 | 1.156849e-58 | -8.615850e-47 |
| Msa1327050 | Msa1466810 | 0.810140 | 1.336560e-50 | -8.615850e-47 |
| Msa1330530 | Msa1466810 | 0.809499 | 1.835821e-50 | -8.615850e-47 |
| Msa0370480 | Msa1466810 | 0.916728 | 1.256446e-85 | -8.615850e-47 |
| Msa0376590 | Msa1466810 | 0.828200 | 1.026105e-54 | -8.615850e-47 |
| Msa0383490 | Msa1466810 | -0.821716 | 3.482882e-53 | -8.615850e-47 |
| Msa0388960 | Msa1466810 | 0.802558 | 5.299273e-49 | -8.615850e-47 |
| Msa0416800 | Msa1466810 | 0.810424 | 1.160423e-50 | -8.615850e-47 |
| Msa0417960 | Msa1466810 | 0.833940 | 3.995147e-56 | -8.615850e-47 |
| Msa0422500 | Msa1466810 | 0.840885 | 6.641497e-58 | -8.615850e-47 |
| Msa0440040 | Msa1466810 | 0.817557 | 3.099509e-52 | -8.615850e-47 |
| Msa0443290 | Msa1466810 | 0.853587 | 2.165305e-61 | -8.615850e-47 |
| Msa0448550 | Msa1466810 | -0.811345 | 7.332836e-51 | -8.615850e-47 |
| Msa0450350 | Msa1466810 | 0.830953 | 2.196859e-55 | -8.615850e-47 |
| Msa0466390 | Msa1466810 | 0.804869 | 1.755879e-49 | -8.615850e-47 |
| Msa0467740 | Msa1466810 | -0.822222 | 2.658656e-53 | -8.615850e-47 |
| Msa0990960 | Msa1466810 | 0.825579 | 4.339972e-54 | -8.615850e-47 |
| Msa0992350 | Msa1466810 | 0.846748 | 1.787586e-59 | -8.615850e-47 |
| Msa0998890 | Msa1466810 | -0.813179 | 2.917600e-51 | -8.615850e-47 |
| Msa1001200 | Msa1466810 | 0.826287 | 2.947145e-54 | -8.615850e-47 |
| Msa1008490 | Msa1466810 | 0.811653 | 6.287872e-51 | -8.615850e-47 |
| Msa1029920 | Msa1466810 | 0.810770 | 9.772307e-51 | -8.615850e-47 |
| Msa1036390 | Msa1466810 | 0.807555 | 4.774852e-50 | -8.615850e-47 |
| Msa1040120 | Msa1466810 | 0.829993 | 3.771730e-55 | -8.615850e-47 |
| Msa1041600 | Msa1466810 | -0.811257 | 7.665506e-51 | -8.615850e-47 |
| Msa1041730 | Msa1466810 | 0.809850 | 1.543413e-50 | -8.615850e-47 |
| Msa1055430 | Msa1466810 | 0.802255 | 6.118214e-49 | -8.615850e-47 |
| Msa1068200 | Msa1466810 | -0.850580 | 1.548959e-60 | -8.615850e-47 |
| Msa1069310 | Msa1466810 | 0.852018 | 6.079186e-61 | -8.615850e-47 |
| Msa1073110 | Msa1466810 | -0.800343 | 1.506630e-48 | -8.615850e-47 |
| Msa1075080 | Msa1466810 | -0.803527 | 3.341607e-49 | -8.615850e-47 |
| Msa1075220 | Msa1466810 | -0.845987 | 2.882172e-59 | -8.615850e-47 |
| Msa1076680 | Msa1466810 | 0.807365 | 5.237137e-50 | -8.615850e-47 |
| Msa1080160 | Msa1466810 | 0.821462 | 3.986421e-53 | -8.615850e-47 |
| Msa1083410 | Msa1466810 | 0.874418 | 6.860497e-68 | -8.615850e-47 |
| Msa1084260 | Msa1466810 | 0.819298 | 1.249626e-52 | -8.615850e-47 |
| Msa1085300 | Msa1466810 | 0.812071 | 5.097557e-51 | -8.615850e-47 |
| Msa1101620 | Msa1466810 | 0.807354 | 5.265693e-50 | -8.615850e-47 |
| Msa0245980 | Msa1466810 | 0.805555 | 1.261457e-49 | -8.615850e-47 |
| Msa0257250 | Msa1466810 | 0.802887 | 4.533333e-49 | -8.615850e-47 |
| Msa0261260 | Msa1466810 | 0.823728 | 1.184951e-53 | -8.615850e-47 |
| Msa0266000 | Msa1466810 | -0.867027 | 1.852100e-65 | -8.615850e-47 |
| Msa0284550 | Msa1466810 | 0.809303 | 2.023069e-50 | -8.615850e-47 |
| Msa0294950 | Msa1466810 | 0.806872 | 6.661656e-50 | -8.615850e-47 |
| Msa0296560 | Msa1466810 | 0.813299 | 2.746476e-51 | -8.615850e-47 |
| Msa0297960 | Msa1466810 | 0.805590 | 1.240529e-49 | -8.615850e-47 |
| Msa0299200 | Msa1466810 | 0.832115 | 1.136389e-55 | -8.615850e-47 |
| Msa0304740 | Msa1466810 | 0.822589 | 2.184427e-53 | -8.615850e-47 |
| Msa0307510 | Msa1466810 | 0.911314 | 6.997978e-83 | -8.615850e-47 |
| Msa0311580 | Msa1466810 | 0.821116 | 4.791472e-53 | -8.615850e-47 |
| Msa0331590 | Msa1466810 | 0.812807 | 3.520489e-51 | -8.615850e-47 |
| Msa0331920 | Msa1466810 | 0.847838 | 8.977021e-60 | -8.615850e-47 |
| Msa0333720 | Msa1466810 | -0.821394 | 4.133172e-53 | -8.615850e-47 |
| Msa0335040 | Msa1466810 | 0.807160 | 5.787935e-50 | -8.615850e-47 |
| Msa0338110 | Msa1466810 | 0.821167 | 4.662438e-53 | -8.615850e-47 |
| Msa0339600 | Msa1466810 | 0.812000 | 5.283388e-51 | -8.615850e-47 |
| Msa1116130 | Msa1466810 | -0.824871 | 6.382869e-54 | -8.615850e-47 |
| Msa1128160 | Msa1466810 | 0.852730 | 3.810812e-61 | -8.615850e-47 |
| Msa1132970 | Msa1466810 | 0.801751 | 7.765439e-49 | -8.615850e-47 |
| Msa1139000 | Msa1466810 | -0.848542 | 5.737317e-60 | -8.615850e-47 |
| Msa1156340 | Msa1466810 | -0.843203 | 1.618410e-58 | -8.615850e-47 |
| Msa1162550 | Msa1466810 | -0.851936 | 6.413435e-61 | -8.615850e-47 |
| Msa1165360 | Msa1466810 | 0.855214 | 7.332591e-62 | -8.615850e-47 |
| Msa1166500 | Msa1466810 | -0.821006 | 5.078155e-53 | -8.615850e-47 |
| Msa1167220 | Msa1466810 | 0.811689 | 6.173905e-51 | -8.615850e-47 |
| Msa1179120 | Msa1466810 | 0.804841 | 1.780073e-49 | -8.615850e-47 |
| Msa1184530 | Msa1466810 | 0.826606 | 2.474050e-54 | -8.615850e-47 |
| Msa1184550 | Msa1466810 | 0.816549 | 5.222201e-52 | -8.615850e-47 |
| Msa1209560 | Msa1466810 | 0.846568 | 2.001812e-59 | -8.615850e-47 |
| Msa1209570 | Msa1466810 | 0.811521 | 6.714573e-51 | -8.615850e-47 |
| Msa1212840 | Msa1466810 | 0.801260 | 9.793746e-49 | -8.615850e-47 |
| Msa0482870 | Msa1466810 | 0.833625 | 4.790754e-56 | -8.615850e-47 |
| Msa0490870 | Msa1466810 | 0.831244 | 1.863586e-55 | -8.615850e-47 |
| Msa0492740 | Msa1466810 | 0.811103 | 8.275494e-51 | -8.615850e-47 |
| Msa0492880 | Msa1466810 | 0.870195 | 1.753086e-66 | -8.615850e-47 |
| Msa0498220 | Msa1466810 | 0.818718 | 1.693282e-52 | -8.615850e-47 |
| Msa0506440 | Msa1466810 | 0.814176 | 1.760647e-51 | -8.615850e-47 |
| Msa0511250 | Msa1466810 | 0.834186 | 3.467539e-56 | -8.615850e-47 |
| Msa0514130 | Msa1466810 | -0.822516 | 2.272572e-53 | -8.615850e-47 |
| Msa0516370 | Msa1466810 | 0.824401 | 8.235701e-54 | -8.615850e-47 |
| Msa0533070 | Msa1466810 | 0.810453 | 1.144050e-50 | -8.615850e-47 |
| Msa0536220 | Msa1466810 | 0.801518 | 8.672298e-49 | -8.615850e-47 |
| Msa0543900 | Msa1466810 | 0.800306 | 1.532915e-48 | -8.615850e-47 |
| Msa0548280 | Msa1466810 | -0.812784 | 3.562173e-51 | -8.615850e-47 |
| Msa0553460 | Msa1466810 | 0.824686 | 7.057463e-54 | -8.615850e-47 |
| Msa0564510 | Msa1466810 | 0.817910 | 2.580924e-52 | -8.615850e-47 |
| Msa0566500 | Msa1466810 | -0.805029 | 1.626250e-49 | -8.615850e-47 |
| Msa0567020 | Msa1466810 | 0.862394 | 5.226423e-64 | -8.615850e-47 |
| Msa0569370 | Msa1466810 | 0.820708 | 5.945972e-53 | -8.615850e-47 |
| Msa0572480 | Msa1466810 | 0.806033 | 1.001141e-49 | -8.615850e-47 |
| Msa0599770 | Msa1466810 | 0.800514 | 1.390621e-48 | -8.615850e-47 |
| Msa0847390 | Msa1466810 | 0.802146 | 6.442183e-49 | -8.615850e-47 |
| Msa0870530 | Msa1466810 | 0.826230 | 3.040626e-54 | -8.615850e-47 |
| Msa0871080 | Msa1466810 | 0.809517 | 1.819865e-50 | -8.615850e-47 |
| Msa0886330 | Msa1466810 | -0.813134 | 2.984262e-51 | -8.615850e-47 |
| Msa0891040 | Msa1466810 | 0.833908 | 4.069354e-56 | -8.615850e-47 |
| Msa0892230 | Msa1466810 | 0.824004 | 1.020498e-53 | -8.615850e-47 |
| Msa0903700 | Msa1466810 | 0.805005 | 1.645133e-49 | -8.615850e-47 |
| Msa0909120 | Msa1466810 | 0.804466 | 2.131047e-49 | -8.615850e-47 |
| Msa0946120 | Msa1466810 | 0.810912 | 9.104772e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466810 | MtrunA17_Chr3g0115551 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 1.65e-79 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466810 | AT1G78020.1 | 49.153 | 118 | 43 | 6 | 1 | 110 | 1 | 109 | 1.05e-26 | 97.1 |
| Msa1466810 | AT1G22160.1 | 49.550 | 111 | 42 | 5 | 1 | 110 | 1 | 98 | 3.23e-24 | 90.1 |
Find 27 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGAGAAGTTGGTGGATA+TGG | 0.255956 | tig0048933:+245 | None:intergenic |
| GAATTTCTTCTAAGGTTTCT+AGG | 0.264307 | tig0048933:+179 | None:intergenic |
| TATCAGCTGAATTTCTTCTA+AGG | 0.311688 | tig0048933:+171 | None:intergenic |
| AAGCAAGAGCGTAAGAAATC+AGG | 0.327281 | tig0048933:+137 | None:intergenic |
| AGAAGTAAGAAGATGATGTT+AGG | 0.329332 | tig0048933:-410 | None:intergenic |
| TGATCTGAACCGTTGATTCC+AGG | 0.372333 | tig0048933:+227 | Msa1466810:intergenic |
| CTTTCTCTGTAAACGCCGTT+TGG | 0.383139 | tig0048933:-117 | Msa1466810:CDS |
| TGTAAACGCCGTTTGGTACC+TGG | 0.425032 | tig0048933:-110 | Msa1466810:CDS |
| CCATATCCACCAACTTCTCC+TGG | 0.454006 | tig0048933:-245 | Msa1466810:CDS |
| GAAGTAAGAAGATGATGTTA+GGG | 0.462099 | tig0048933:-409 | None:intergenic |
| CAGGTCCATGACGGTTGAAA+AGG | 0.471195 | tig0048933:+285 | Msa1466810:intergenic |
| AACCGTCATGGACCTGGTGT+TGG | 0.498303 | tig0048933:-278 | Msa1466810:CDS |
| AGCAAGAGCGTAAGAAATCA+GGG | 0.500012 | tig0048933:+138 | Msa1466810:intergenic |
| GGACCTGGTGTTGGTCCGTA+CGG | 0.509388 | tig0048933:-269 | Msa1466810:CDS |
| TCAACGGTTCAGATCAGAGC+AGG | 0.509698 | tig0048933:-220 | Msa1466810:CDS |
| CCGTTGATTCCAGGAGAAGT+TGG | 0.513302 | tig0048933:+236 | Msa1466810:intergenic |
| TGTTACTGTGTTCAGATCGA+AGG | 0.548881 | tig0048933:+337 | Msa1466810:intergenic |
| TTGATTCCAGGAGAAGTTGG+TGG | 0.560507 | tig0048933:+239 | Msa1466810:intergenic |
| TCAGAGCAGGGTTATGTCCA+TGG | 0.575433 | tig0048933:-207 | Msa1466810:CDS |
| GTTGGTGGATATGGACCGTA+CGG | 0.599015 | tig0048933:+254 | Msa1466810:intergenic |
| GGACCGTACGGACCAACACC+AGG | 0.604586 | tig0048933:+266 | Msa1466810:intergenic |
| CCAACTTCTCCTGGAATCAA+CGG | 0.605664 | tig0048933:-236 | Msa1466810:CDS |
| TGTCACGACCAGGTACCAAA+CGG | 0.608597 | tig0048933:+102 | Msa1466810:intergenic |
| AAGGTTTCTAGGTGATACCA+TGG | 0.614252 | tig0048933:+190 | Msa1466810:intergenic |
| GACCAACACCAGGTCCATGA+CGG | 0.641553 | tig0048933:+276 | Msa1466810:intergenic |
| TACATGTAGATGTCACGACC+AGG | 0.649454 | tig0048933:+92 | Msa1466810:intergenic |
| CAACGGTTCAGATCAGAGCA+GGG | 0.716813 | tig0048933:-219 | Msa1466810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGCTTGTTGTTCTTTTCAT+TGG | + | tig0048933:121-140 | None:intergenic | 30.0% |
| ! | AAAAGGTTGTTGTTGTTGTT+AGG | + | tig0048933:190-209 | None:intergenic | 30.0% |
| !! | GAATTTCTTCTAAGGTTTCT+AGG | + | tig0048933:313-332 | Msa1466810:intergenic | 30.0% |
| TATCAGCTGAATTTCTTCTA+AGG | + | tig0048933:321-340 | Msa1466810:intergenic | 30.0% | |
| !!! | CTTGTTGTTCTTTTCATTGG+AGG | + | tig0048933:118-137 | None:intergenic | 35.0% |
| TGTTACTGTGTTCAGATCGA+AGG | + | tig0048933:155-174 | None:intergenic | 40.0% | |
| ! | AACAACCTTTTCAACCGTCA+TGG | - | tig0048933:199-218 | Msa1466810:CDS | 40.0% |
| ! | AAGGTTTCTAGGTGATACCA+TGG | + | tig0048933:302-321 | Msa1466810:intergenic | 40.0% |
| ! | AGCAAGAGCGTAAGAAATCA+GGG | + | tig0048933:354-373 | Msa1466810:intergenic | 40.0% |
| ! | AAGCAAGAGCGTAAGAAATC+AGG | + | tig0048933:355-374 | Msa1466810:intergenic | 40.0% |
| ! | GTTCTTTTCATTGGAGGACG+AGG | + | tig0048933:112-131 | None:intergenic | 45.0% |
| TTGATTCCAGGAGAAGTTGG+TGG | + | tig0048933:253-272 | Msa1466810:intergenic | 45.0% | |
| CCAACTTCTCCTGGAATCAA+CGG | - | tig0048933:253-272 | Msa1466810:CDS | 45.0% | |
| !! | TGATCTGAACCGTTGATTCC+AGG | + | tig0048933:265-284 | Msa1466810:intergenic | 45.0% |
| CTTTCTCTGTAAACGCCGTT+TGG | - | tig0048933:372-391 | Msa1466810:CDS | 45.0% | |
| TACATGTAGATGTCACGACC+AGG | + | tig0048933:400-419 | Msa1466810:intergenic | 45.0% | |
| CAGGTCCATGACGGTTGAAA+AGG | + | tig0048933:207-226 | Msa1466810:intergenic | 50.0% | |
| ! | CTTTTCAACCGTCATGGACC+TGG | - | tig0048933:205-224 | Msa1466810:CDS | 50.0% |
| ! | GTTGGTGGATATGGACCGTA+CGG | + | tig0048933:238-257 | Msa1466810:intergenic | 50.0% |
| !! | CCAGGAGAAGTTGGTGGATA+TGG | + | tig0048933:247-266 | Msa1466810:intergenic | 50.0% |
| CCATATCCACCAACTTCTCC+TGG | - | tig0048933:244-263 | Msa1466810:CDS | 50.0% | |
| !! | CCGTTGATTCCAGGAGAAGT+TGG | + | tig0048933:256-275 | Msa1466810:intergenic | 50.0% |
| TCAACGGTTCAGATCAGAGC+AGG | - | tig0048933:269-288 | Msa1466810:CDS | 50.0% | |
| CAACGGTTCAGATCAGAGCA+GGG | - | tig0048933:270-289 | Msa1466810:CDS | 50.0% | |
| TCAGAGCAGGGTTATGTCCA+TGG | - | tig0048933:282-301 | Msa1466810:CDS | 50.0% | |
| TGTAAACGCCGTTTGGTACC+TGG | - | tig0048933:379-398 | Msa1466810:CDS | 50.0% | |
| TGTCACGACCAGGTACCAAA+CGG | + | tig0048933:390-409 | Msa1466810:intergenic | 50.0% | |
| AACCGTCATGGACCTGGTGT+TGG | - | tig0048933:211-230 | Msa1466810:CDS | 55.0% | |
| GACCAACACCAGGTCCATGA+CGG | + | tig0048933:216-235 | Msa1466810:intergenic | 55.0% | |
| !! | GGACCTGGTGTTGGTCCGTA+CGG | - | tig0048933:220-239 | Msa1466810:CDS | 60.0% |
| GGACCGTACGGACCAACACC+AGG | + | tig0048933:226-245 | Msa1466810:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0048933 | gene | 91 | 420 | 91 | ID=Msa1466810;Name=Msa1466810 |
| tig0048933 | mRNA | 91 | 420 | 91 | ID=Msa1466810-mRNA-1;Parent=Msa1466810;Name=Msa1466810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|110 |
| tig0048933 | exon | 91 | 420 | 91 | ID=Msa1466810-mRNA-1:exon:25149;Parent=Msa1466810-mRNA-1 |
| tig0048933 | CDS | 91 | 420 | 91 | ID=Msa1466810-mRNA-1:cds;Parent=Msa1466810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
