Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895650 | XP_013452731.1 | 96.477 | 369 | 11 | 2 | 1 | 368 | 1 | 368 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895650 | sp|Q93WJ9|KAN1_ARATH | 53.171 | 205 | 70 | 9 | 182 | 368 | 201 | 397 | 1.42e-46 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895650 | A0A072UAE1 | 96.477 | 369 | 11 | 2 | 1 | 368 | 1 | 368 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0895650 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0637900 | Msa0895650 | 0.804381 | 2.220411e-49 | -8.615850e-47 |
| Msa0756530 | Msa0895650 | 0.803489 | 3.402638e-49 | -8.615850e-47 |
| Msa0805430 | Msa0895650 | 0.809376 | 1.950874e-50 | -8.615850e-47 |
| Msa0178510 | Msa0895650 | 0.806511 | 7.938991e-50 | -8.615850e-47 |
| Msa0482180 | Msa0895650 | 0.803893 | 2.804446e-49 | -8.615850e-47 |
| Msa0530650 | Msa0895650 | 0.801171 | 1.021083e-48 | -8.615850e-47 |
| Msa0598160 | Msa0895650 | 0.805021 | 1.632463e-49 | -8.615850e-47 |
| Msa0895650 | Msa0960980 | 0.810436 | 1.153936e-50 | -8.615850e-47 |
| Msa0895650 | Msa1021510 | 0.809887 | 1.514807e-50 | -8.615850e-47 |
| Msa0895650 | Msa1105500 | 0.803632 | 3.177784e-49 | -8.615850e-47 |
| Msa0895650 | Msa1372150 | 0.808518 | 2.978214e-50 | -8.615850e-47 |
| Msa0895650 | Msa1435400 | 0.807640 | 4.578433e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895650 | MtrunA17_Chr6g0479431 | 96.477 | 369 | 11 | 2 | 1 | 368 | 1 | 368 | 0.0 | 727 |
| Msa0895650 | MtrunA17_Chr3g0109981 | 51.429 | 210 | 79 | 8 | 174 | 367 | 250 | 452 | 3.17e-49 | 172 |
| Msa0895650 | MtrunA17_Chr8g0366281 | 46.117 | 206 | 79 | 6 | 184 | 367 | 157 | 352 | 9.72e-42 | 149 |
| Msa0895650 | MtrunA17_Chr5g0410741 | 76.744 | 86 | 18 | 1 | 182 | 267 | 201 | 284 | 1.70e-36 | 136 |
| Msa0895650 | MtrunA17_Chr1g0154261 | 70.115 | 87 | 23 | 1 | 179 | 265 | 106 | 189 | 4.34e-34 | 127 |
| Msa0895650 | MtrunA17_Chr7g0243081 | 56.627 | 83 | 29 | 1 | 203 | 278 | 72 | 154 | 5.82e-23 | 98.6 |
| Msa0895650 | MtrunA17_Chr1g0162931 | 64.407 | 59 | 21 | 0 | 201 | 259 | 17 | 75 | 1.49e-21 | 93.2 |
| Msa0895650 | MtrunA17_Chr1g0210911 | 51.852 | 81 | 29 | 1 | 178 | 258 | 8 | 78 | 4.68e-21 | 92.8 |
| Msa0895650 | MtrunA17_Chr8g0379121 | 67.241 | 58 | 19 | 0 | 201 | 258 | 110 | 167 | 6.30e-20 | 90.5 |
| Msa0895650 | MtrunA17_Chr2g0320231 | 68.966 | 58 | 18 | 0 | 201 | 258 | 96 | 153 | 7.54e-20 | 89.7 |
| Msa0895650 | MtrunA17_Chr7g0261911 | 57.534 | 73 | 29 | 1 | 203 | 275 | 263 | 333 | 2.16e-18 | 86.3 |
| Msa0895650 | MtrunA17_Chr2g0288601 | 66.038 | 53 | 18 | 0 | 201 | 253 | 70 | 122 | 8.12e-18 | 79.0 |
| Msa0895650 | MtrunA17_Chr7g0274471 | 56.164 | 73 | 30 | 1 | 203 | 275 | 219 | 289 | 1.27e-17 | 84.0 |
| Msa0895650 | MtrunA17_Chr1g0190301 | 66.071 | 56 | 19 | 0 | 203 | 258 | 176 | 231 | 1.38e-17 | 83.6 |
| Msa0895650 | MtrunA17_Chr5g0409731 | 67.925 | 53 | 17 | 0 | 203 | 255 | 26 | 78 | 2.82e-17 | 81.3 |
| Msa0895650 | MtrunA17_Chr3g0095611 | 49.296 | 71 | 36 | 0 | 203 | 273 | 20 | 90 | 3.01e-17 | 79.7 |
| Msa0895650 | MtrunA17_Chr7g0254981 | 57.576 | 66 | 26 | 1 | 204 | 269 | 52 | 115 | 3.95e-17 | 80.9 |
| Msa0895650 | MtrunA17_Chr2g0283951 | 61.290 | 62 | 20 | 1 | 201 | 258 | 88 | 149 | 1.01e-16 | 80.9 |
| Msa0895650 | MtrunA17_Chr1g0175091 | 57.377 | 61 | 26 | 0 | 204 | 264 | 260 | 320 | 1.28e-16 | 80.9 |
| Msa0895650 | MtrunA17_Chr2g0291021 | 60.000 | 65 | 24 | 1 | 204 | 268 | 51 | 113 | 2.98e-16 | 79.0 |
| Msa0895650 | MtrunA17_Chr7g0258551 | 60.000 | 55 | 22 | 0 | 204 | 258 | 214 | 268 | 3.58e-16 | 79.3 |
| Msa0895650 | MtrunA17_Chr2g0290991 | 58.333 | 60 | 25 | 0 | 203 | 262 | 40 | 99 | 6.31e-16 | 77.8 |
| Msa0895650 | MtrunA17_Chr1g0197171 | 58.333 | 60 | 25 | 0 | 203 | 262 | 45 | 104 | 7.04e-16 | 77.4 |
| Msa0895650 | MtrunA17_Chr2g0321461 | 53.125 | 64 | 30 | 0 | 203 | 266 | 46 | 109 | 1.51e-15 | 77.4 |
| Msa0895650 | MtrunA17_Chr8g0356501 | 56.667 | 60 | 26 | 0 | 203 | 262 | 38 | 97 | 2.00e-15 | 76.6 |
| Msa0895650 | MtrunA17_Chr2g0310011 | 56.667 | 60 | 26 | 0 | 203 | 262 | 36 | 95 | 2.25e-15 | 76.6 |
| Msa0895650 | MtrunA17_Chr6g0461641 | 60.377 | 53 | 21 | 0 | 203 | 255 | 43 | 95 | 3.96e-15 | 76.3 |
| Msa0895650 | MtrunA17_Chr5g0417521 | 53.571 | 56 | 26 | 0 | 203 | 258 | 16 | 71 | 6.62e-15 | 75.1 |
| Msa0895650 | MtrunA17_Chr4g0042451 | 39.785 | 93 | 50 | 2 | 203 | 295 | 18 | 104 | 1.28e-14 | 74.3 |
| Msa0895650 | MtrunA17_Chr1g0175081 | 49.180 | 61 | 31 | 0 | 204 | 264 | 24 | 84 | 2.90e-14 | 68.2 |
| Msa0895650 | MtrunA17_Chr1g0175071 | 50.847 | 59 | 29 | 0 | 204 | 262 | 179 | 237 | 8.71e-13 | 68.6 |
| Msa0895650 | MtrunA17_Chr7g0242521 | 55.172 | 58 | 23 | 1 | 204 | 258 | 15 | 72 | 9.52e-13 | 67.4 |
| Msa0895650 | MtrunA17_Chr4g0045361 | 39.623 | 106 | 57 | 2 | 184 | 289 | 261 | 359 | 3.63e-12 | 67.4 |
| Msa0895650 | MtrunA17_Chr4g0062921 | 40.625 | 96 | 54 | 2 | 172 | 267 | 206 | 298 | 7.55e-12 | 66.2 |
| Msa0895650 | MtrunA17_Chr2g0304841 | 39.024 | 82 | 43 | 2 | 201 | 276 | 212 | 292 | 1.89e-11 | 65.5 |
| Msa0895650 | MtrunA17_Chr1g0198601 | 40.741 | 81 | 46 | 1 | 192 | 272 | 201 | 279 | 2.67e-11 | 64.3 |
| Msa0895650 | MtrunA17_Chr5g0402631 | 45.122 | 82 | 43 | 1 | 201 | 282 | 213 | 292 | 4.63e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895650 | AT5G16560.1 | 53.171 | 205 | 70 | 9 | 182 | 368 | 201 | 397 | 1.45e-47 | 166 |
| Msa0895650 | AT1G32240.1 | 45.673 | 208 | 70 | 6 | 185 | 368 | 198 | 386 | 2.35e-38 | 141 |
| Msa0895650 | AT5G42630.1 | 46.569 | 204 | 92 | 6 | 165 | 368 | 71 | 257 | 2.51e-38 | 139 |
| Msa0895650 | AT1G32240.2 | 84.337 | 83 | 11 | 2 | 185 | 267 | 198 | 278 | 4.43e-38 | 140 |
| Msa0895650 | AT5G42630.2 | 68.367 | 98 | 28 | 1 | 165 | 262 | 71 | 165 | 2.32e-36 | 132 |
| Msa0895650 | AT4G17695.1 | 45.143 | 175 | 64 | 5 | 95 | 267 | 85 | 229 | 1.27e-35 | 132 |
| Msa0895650 | AT4G04605.1 | 68.966 | 58 | 18 | 0 | 201 | 258 | 13 | 70 | 1.88e-21 | 92.0 |
| Msa0895650 | AT2G38300.1 | 46.341 | 123 | 51 | 4 | 201 | 311 | 53 | 172 | 3.16e-21 | 94.0 |
| Msa0895650 | AT2G40260.1 | 50.000 | 100 | 31 | 3 | 201 | 300 | 81 | 161 | 3.96e-21 | 94.4 |
| Msa0895650 | AT2G02060.2 | 57.143 | 84 | 23 | 3 | 175 | 255 | 9 | 82 | 1.03e-20 | 90.9 |
| Msa0895650 | AT2G02060.1 | 57.143 | 84 | 23 | 3 | 175 | 255 | 9 | 82 | 1.03e-20 | 90.9 |
| Msa0895650 | AT1G14600.1 | 66.102 | 59 | 20 | 0 | 202 | 260 | 23 | 81 | 7.38e-20 | 88.2 |
| Msa0895650 | AT4G04580.1 | 59.322 | 59 | 24 | 0 | 203 | 261 | 15 | 73 | 3.62e-18 | 81.3 |
| Msa0895650 | AT2G42660.1 | 66.071 | 56 | 19 | 0 | 203 | 258 | 51 | 106 | 3.79e-18 | 83.6 |
| Msa0895650 | AT5G45580.2 | 53.947 | 76 | 28 | 1 | 180 | 255 | 8 | 76 | 4.04e-18 | 84.0 |
| Msa0895650 | AT5G45580.1 | 67.925 | 53 | 17 | 0 | 203 | 255 | 8 | 60 | 5.70e-18 | 83.2 |
| Msa0895650 | AT4G04555.1 | 55.738 | 61 | 27 | 0 | 201 | 261 | 13 | 73 | 2.93e-17 | 77.0 |
| Msa0895650 | AT4G28610.1 | 52.055 | 73 | 35 | 0 | 204 | 276 | 227 | 299 | 3.79e-17 | 82.8 |
| Msa0895650 | AT3G04450.4 | 54.930 | 71 | 30 | 1 | 204 | 274 | 200 | 268 | 7.34e-17 | 81.6 |
| Msa0895650 | AT3G04450.2 | 54.930 | 71 | 30 | 1 | 204 | 274 | 200 | 268 | 7.34e-17 | 81.6 |
| Msa0895650 | AT3G04450.1 | 54.930 | 71 | 30 | 1 | 204 | 274 | 240 | 308 | 8.39e-17 | 82.0 |
| Msa0895650 | AT5G18240.2 | 43.333 | 90 | 49 | 1 | 203 | 290 | 46 | 135 | 1.12e-16 | 81.3 |
| Msa0895650 | AT5G18240.3 | 43.333 | 90 | 49 | 1 | 203 | 290 | 46 | 135 | 1.12e-16 | 81.3 |
| Msa0895650 | AT5G18240.1 | 43.333 | 90 | 49 | 1 | 203 | 290 | 46 | 135 | 1.14e-16 | 81.3 |
| Msa0895650 | AT5G18240.4 | 43.333 | 90 | 49 | 1 | 203 | 290 | 46 | 135 | 1.14e-16 | 81.3 |
| Msa0895650 | AT5G18240.5 | 43.333 | 90 | 49 | 1 | 203 | 290 | 46 | 135 | 1.21e-16 | 81.3 |
| Msa0895650 | AT2G01060.1 | 59.091 | 66 | 25 | 1 | 204 | 269 | 17 | 80 | 1.31e-16 | 79.7 |
| Msa0895650 | AT4G13640.1 | 44.318 | 88 | 47 | 1 | 203 | 290 | 38 | 123 | 2.51e-16 | 79.0 |
| Msa0895650 | AT4G13640.2 | 44.318 | 88 | 47 | 1 | 203 | 290 | 38 | 123 | 2.53e-16 | 79.0 |
| Msa0895650 | AT3G12730.1 | 58.333 | 60 | 25 | 0 | 203 | 262 | 24 | 83 | 2.84e-16 | 77.8 |
| Msa0895650 | AT3G04450.3 | 58.462 | 65 | 25 | 1 | 204 | 268 | 240 | 302 | 3.60e-16 | 79.0 |
| Msa0895650 | AT3G24120.2 | 46.053 | 76 | 41 | 0 | 203 | 278 | 42 | 117 | 5.89e-16 | 78.2 |
| Msa0895650 | AT3G24120.1 | 46.053 | 76 | 41 | 0 | 203 | 278 | 42 | 117 | 5.91e-16 | 77.8 |
| Msa0895650 | AT3G04030.1 | 44.737 | 76 | 42 | 0 | 203 | 278 | 46 | 121 | 8.13e-16 | 78.6 |
| Msa0895650 | AT3G04030.3 | 44.737 | 76 | 42 | 0 | 203 | 278 | 46 | 121 | 9.56e-16 | 78.6 |
| Msa0895650 | AT5G29000.1 | 63.636 | 55 | 20 | 0 | 204 | 258 | 190 | 244 | 1.33e-15 | 77.8 |
| Msa0895650 | AT5G29000.3 | 63.636 | 55 | 20 | 0 | 204 | 258 | 190 | 244 | 1.33e-15 | 77.8 |
| Msa0895650 | AT5G29000.4 | 63.636 | 55 | 20 | 0 | 204 | 258 | 233 | 287 | 1.52e-15 | 77.0 |
| Msa0895650 | AT5G29000.2 | 63.636 | 55 | 20 | 0 | 204 | 258 | 233 | 287 | 1.86e-15 | 77.8 |
| Msa0895650 | AT1G79430.2 | 56.667 | 60 | 26 | 0 | 203 | 262 | 35 | 94 | 2.87e-15 | 76.6 |
| Msa0895650 | AT2G20400.2 | 50.667 | 75 | 37 | 0 | 204 | 278 | 233 | 307 | 3.91e-15 | 76.6 |
| Msa0895650 | AT2G20400.1 | 57.812 | 64 | 27 | 0 | 204 | 267 | 233 | 296 | 9.86e-15 | 75.5 |
| Msa0895650 | AT5G06800.3 | 56.364 | 55 | 24 | 0 | 204 | 258 | 194 | 248 | 1.99e-14 | 73.2 |
| Msa0895650 | AT3G13040.3 | 61.818 | 55 | 21 | 0 | 204 | 258 | 243 | 297 | 4.78e-14 | 73.6 |
| Msa0895650 | AT3G13040.1 | 61.818 | 55 | 21 | 0 | 204 | 258 | 243 | 297 | 4.78e-14 | 73.6 |
| Msa0895650 | AT3G13040.2 | 61.818 | 55 | 21 | 0 | 204 | 258 | 243 | 297 | 4.78e-14 | 73.6 |
| Msa0895650 | AT5G06800.2 | 56.364 | 55 | 24 | 0 | 204 | 258 | 194 | 248 | 7.13e-14 | 72.8 |
| Msa0895650 | AT2G06020.1 | 61.538 | 52 | 20 | 0 | 204 | 255 | 88 | 139 | 7.17e-14 | 72.0 |
| Msa0895650 | AT5G06800.1 | 56.364 | 55 | 24 | 0 | 204 | 258 | 194 | 248 | 7.41e-14 | 72.8 |
| Msa0895650 | AT1G69580.1 | 45.205 | 73 | 37 | 1 | 203 | 272 | 35 | 107 | 1.46e-13 | 71.2 |
| Msa0895650 | AT1G69580.2 | 45.205 | 73 | 37 | 1 | 203 | 272 | 35 | 107 | 1.50e-13 | 71.2 |
| Msa0895650 | AT3G04030.2 | 43.421 | 76 | 42 | 1 | 203 | 278 | 46 | 120 | 2.63e-13 | 70.9 |
| Msa0895650 | AT2G03500.1 | 44.737 | 76 | 38 | 1 | 194 | 269 | 229 | 300 | 8.89e-12 | 66.6 |
| Msa0895650 | AT1G32240.3 | 93.548 | 31 | 2 | 0 | 237 | 267 | 1 | 31 | 2.62e-11 | 61.6 |
Find 61 sgRNAs with CRISPR-Local
Find 660 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTGGAAATTCTGAATT+TGG | 0.093125 | 6_1:-83802044 | Msa0895650:CDS |
| ATTAGCTCCAAAACTGATTT+AGG | 0.195719 | 6_1:+83801520 | None:intergenic |
| GCTACACTTCCAACATTCTA+TGG | 0.201212 | 6_1:-83799802 | Msa0895650:CDS |
| CTCTTATTACTTTGTTGTCT+TGG | 0.256380 | 6_1:+83801990 | None:intergenic |
| AAAGCATATACAAGGTTTCT+TGG | 0.284802 | 6_1:+83790357 | None:intergenic |
| AGCTACTCCTAAATCAGTTT+TGG | 0.286064 | 6_1:-83801527 | Msa0895650:CDS |
| TTTGATCATGAGGTTGTGTT+AGG | 0.298913 | 6_1:+83799861 | None:intergenic |
| TTAGTTATTTACATGATTCA+TGG | 0.306061 | 6_1:-83790520 | Msa0895650:three_prime_UTR |
| CCTAAGGTGAACTCCAAGTT+TGG | 0.345023 | 6_1:+83790558 | None:intergenic |
| GAATCTTTCTCTATTATAGA+AGG | 0.349275 | 6_1:+83802221 | None:intergenic |
| GAACTAGTCCATCGCATTCT+CGG | 0.354623 | 6_1:+83801954 | None:intergenic |
| GCATCTCTAGATCATGATAT+TGG | 0.355771 | 6_1:-83799824 | Msa0895650:CDS |
| GACAAGCCAGCAGCTTCTTC+AGG | 0.364958 | 6_1:-83800555 | Msa0895650:intron |
| GGAAATTCTGAATTTGGAAA+TGG | 0.377930 | 6_1:-83802038 | Msa0895650:CDS |
| ACATGGACACAAGGTAGTTC+TGG | 0.378399 | 6_1:-83791409 | Msa0895650:CDS |
| CCAAACTTGGAGTTCACCTT+AGG | 0.383764 | 6_1:-83790558 | Msa0895650:CDS |
| TTTCTGAAGCTGAGAGTGTT+TGG | 0.384586 | 6_1:-83802307 | Msa0895650:CDS |
| TCATGTCAAGAGTCATTTAC+AGG | 0.385177 | 6_1:-83801473 | Msa0895650:intron |
| CAGCAGAAGGTGAATCAGTT+TGG | 0.390273 | 6_1:-83802059 | Msa0895650:CDS |
| GAAATTTGAAGTGAAAGATC+AGG | 0.390677 | 6_1:+83802542 | None:intergenic |
| GTTCACGCCGTTGAGCTTCT+CGG | 0.392269 | 6_1:-83801915 | Msa0895650:CDS |
| CTCTCTCCATGAGTCTTTGA+AGG | 0.400063 | 6_1:-83803008 | Msa0895650:five_prime_UTR |
| ATATATATAAATAGCTAGTT+AGG | 0.409598 | 6_1:-83790420 | Msa0895650:three_prime_UTR |
| TTTATGAAGCTCATGATAAA+GGG | 0.410947 | 6_1:-83802977 | Msa0895650:intron |
| AGAGAAGAGATATACTTTCA+TGG | 0.417461 | 6_1:+83801889 | None:intergenic |
| TATGGGCTAATTCTTCTTCA+AGG | 0.425004 | 6_1:-83799784 | Msa0895650:intron |
| CAAGACAACAAAGTAATAAG+AGG | 0.452623 | 6_1:-83801989 | Msa0895650:CDS |
| TTCCAATGTGGTGAGTTGAT+AGG | 0.454476 | 6_1:+83791353 | None:intergenic |
| AATGATGCTATTACTCATGA+AGG | 0.469312 | 6_1:-83802437 | Msa0895650:CDS |
| CAAATTGATGAAGAACTGTT+TGG | 0.476407 | 6_1:+83802515 | None:intergenic |
| GTTAGATTAAGACCCTTCAA+TGG | 0.480149 | 6_1:-83802269 | Msa0895650:CDS |
| TATCACCACCTAATAATCTT+CGG | 0.488282 | 6_1:+83790328 | None:intergenic |
| TTGATCATGAGGTTGTGTTA+GGG | 0.490043 | 6_1:+83799862 | None:intergenic |
| CAAACTTGGAGTTCACCTTA+GGG | 0.497170 | 6_1:-83790557 | Msa0895650:CDS |
| ATAAAGAGGGATTCCATTGA+AGG | 0.509511 | 6_1:+83802256 | None:intergenic |
| AGACTGTTCGAATCCAAACT+TGG | 0.529409 | 6_1:-83790571 | Msa0895650:CDS |
| CTACACTTCCAACATTCTAT+GGG | 0.540264 | 6_1:-83799801 | Msa0895650:CDS |
| GGTTTCAAATCTCATAGTGA+TGG | 0.541966 | 6_1:-83802416 | Msa0895650:CDS |
| TACAAGGTTTCTTGGATGTG+TGG | 0.551276 | 6_1:+83790365 | None:intergenic |
| AGACATCCTTCAAAGACTCA+TGG | 0.552003 | 6_1:+83803002 | None:intergenic |
| CCACATTGGAAAGCTTCCTC+AGG | 0.553225 | 6_1:-83791341 | Msa0895650:intron |
| AGAATTAGCCCATAGAATGT+TGG | 0.553625 | 6_1:+83799793 | None:intergenic |
| AAAGTAATAAGAGGAACATG+AGG | 0.570980 | 6_1:-83801980 | Msa0895650:CDS |
| GGATTGTTATCACTATAAAG+AGG | 0.571992 | 6_1:+83802242 | None:intergenic |
| ATCCTATCAACTCACCACAT+TGG | 0.574962 | 6_1:-83791355 | Msa0895650:CDS |
| TAAACAATCAAGAAGTTCCA+AGG | 0.577213 | 6_1:-83790604 | Msa0895650:CDS |
| ATTATACCTGAAGAAGCTGC+TGG | 0.580120 | 6_1:+83800549 | None:intergenic |
| GATTGTTATCACTATAAAGA+GGG | 0.594862 | 6_1:+83802243 | None:intergenic |
| TGAGGGCTCCGAGAATGCGA+TGG | 0.608831 | 6_1:-83801962 | Msa0895650:CDS |
| AGATCAGGAATCTGATTCTG+TGG | 0.619147 | 6_1:+83802557 | None:intergenic |
| TAAAGAGGGATTCCATTGAA+GGG | 0.619445 | 6_1:+83802257 | None:intergenic |
| ACAACATCAACAACAGCAGA+AGG | 0.624077 | 6_1:-83802072 | Msa0895650:CDS |
| TTTAGCCGAAGATTATTAGG+TGG | 0.643542 | 6_1:-83790333 | Msa0895650:three_prime_UTR |
| TGACTGGCAGTAATGGAACA+TGG | 0.648272 | 6_1:-83791426 | Msa0895650:intron |
| CCTGAGGAAGCTTTCCAATG+TGG | 0.649852 | 6_1:+83791341 | None:intergenic |
| GAGAGAGAGTGAGAGAGATG+TGG | 0.655005 | 6_1:+83803060 | None:intergenic |
| ATGGCCGCCGAGAAGCTCAA+CGG | 0.658735 | 6_1:+83801908 | None:intergenic |
| AAGTAATAAGAGGAACATGA+GGG | 0.670806 | 6_1:-83801979 | Msa0895650:CDS |
| AGTAATGGAACATGGACACA+AGG | 0.680964 | 6_1:-83791418 | Msa0895650:CDS |
| CACGCCGTTGAGCTTCTCGG+CGG | 0.701910 | 6_1:-83801912 | Msa0895650:CDS |
| AATTTGGAAATGGATTTGTG+AGG | 0.704670 | 6_1:-83802028 | Msa0895650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAATAATTTTTTT+TGG | + | chr6_1:83790617-83790636 | None:intergenic | 0.0% |
| !!! | TATTTTTTTTTTATTTTATA+TGG | + | chr6_1:83802915-83802934 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTCTTAAAGAA+GGG | + | chr6_1:83790446-83790465 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTCTTAAAGA+AGG | + | chr6_1:83790447-83790466 | None:intergenic | 10.0% |
| !!! | TATTTCTTAATTTTCTTTAA+AGG | - | chr6_1:83790587-83790606 | Msa0895650:CDS | 10.0% |
| !!! | ATTTCTTAATTTTCTTTAAA+GGG | - | chr6_1:83790588-83790607 | Msa0895650:CDS | 10.0% |
| !! | TCAATTAAATAATAACAATA+AGG | + | chr6_1:83792234-83792253 | None:intergenic | 10.0% |
| !! | GTTTAATAATAATTTAGTTA+AGG | + | chr6_1:83792637-83792656 | None:intergenic | 10.0% |
| !! | TTTAGTATAAATTATACATT+AGG | + | chr6_1:83792864-83792883 | None:intergenic | 10.0% |
| !! | AAGAAAAAAATGTTTAAATA+TGG | + | chr6_1:83792985-83793004 | None:intergenic | 10.0% |
| !!! | TCTAAATAATTTTTTTCTTT+GGG | + | chr6_1:83793067-83793086 | None:intergenic | 10.0% |
| !!! | TTCTAAATAATTTTTTTCTT+TGG | + | chr6_1:83793068-83793087 | None:intergenic | 10.0% |
| !! | TTTAAAAGTAGTAAAATTAA+GGG | + | chr6_1:83793312-83793331 | None:intergenic | 10.0% |
| !! | ATTTAAAAGTAGTAAAATTA+AGG | + | chr6_1:83793313-83793332 | None:intergenic | 10.0% |
| !!! | ATTTTGTACAAATTATATTT+TGG | + | chr6_1:83794452-83794471 | None:intergenic | 10.0% |
| !! | TATTATTACATTGAATTATA+TGG | + | chr6_1:83794788-83794807 | None:intergenic | 10.0% |
| !!! | TGAATAGTTTTTAAAATATT+AGG | - | chr6_1:83795440-83795459 | Msa0895650:intron | 10.0% |
| !!! | GAATAGTTTTTAAAATATTA+GGG | - | chr6_1:83795441-83795460 | Msa0895650:intron | 10.0% |
| !!! | AATTTTGAAATATATAGTTA+TGG | + | chr6_1:83795468-83795487 | None:intergenic | 10.0% |
| !!! | TTTAAAATATGTTCATATAT+AGG | - | chr6_1:83795761-83795780 | Msa0895650:intron | 10.0% |
| !! | TTATTTACTACTATAAAAAT+GGG | + | chr6_1:83796036-83796055 | None:intergenic | 10.0% |
| !! | TTTATTTACTACTATAAAAA+TGG | + | chr6_1:83796037-83796056 | None:intergenic | 10.0% |
| !! | AACAAAATATAGAATAATTA+AGG | - | chr6_1:83796169-83796188 | Msa0895650:intron | 10.0% |
| !! | ACATAGAAATAAAAAAAAAA+CGG | - | chr6_1:83797011-83797030 | Msa0895650:intron | 10.0% |
| !! | AAATTATTCAAATAATCAAT+AGG | + | chr6_1:83798877-83798896 | None:intergenic | 10.0% |
| !!! | TTGAAGTTTTAAAATTTTAT+TGG | + | chr6_1:83799017-83799036 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAAAAATGGTAA+AGG | + | chr6_1:83800424-83800443 | None:intergenic | 10.0% |
| !! | TTATTAAACTTTAGTAAAAA+TGG | - | chr6_1:83800485-83800504 | Msa0895650:intron | 10.0% |
| !!! | CAAAAATAATATTTTTTTTG+GGG | + | chr6_1:83800750-83800769 | None:intergenic | 10.0% |
| !!! | AAATATTATTTTTGAATTAG+TGG | - | chr6_1:83800756-83800775 | Msa0895650:intron | 10.0% |
| !!! | AATATTATTTTTGAATTAGT+GGG | - | chr6_1:83800757-83800776 | Msa0895650:intron | 10.0% |
| !!! | TTTATTTGTATTGATATTTT+AGG | - | chr6_1:83800896-83800915 | Msa0895650:intron | 10.0% |
| !!! | ATAATTTTTATTGTTGAAAA+AGG | + | chr6_1:83800945-83800964 | None:intergenic | 10.0% |
| !! | TTATTAATCTATTATTAAAC+AGG | - | chr6_1:83801043-83801062 | Msa0895650:intron | 10.0% |
| !! | ACCTAAAAAATTATAATTTA+TGG | - | chr6_1:83801262-83801281 | Msa0895650:intron | 10.0% |
| !! | CCTAAAAAATTATAATTTAT+GGG | - | chr6_1:83801263-83801282 | Msa0895650:intron | 10.0% |
| !! | CTAAAAAATTATAATTTATG+GGG | - | chr6_1:83801264-83801283 | Msa0895650:intron | 10.0% |
| !!! | TTGAAATTATCTTTTTTAAA+AGG | + | chr6_1:83802147-83802166 | None:intergenic | 10.0% |
| !! | AAAAAAGATAATTTCAAATT+TGG | - | chr6_1:83802150-83802169 | Msa0895650:CDS | 10.0% |
| !! | AAATTTACTAAAAATAGTAA+AGG | + | chr6_1:83802435-83802454 | None:intergenic | 10.0% |
| !! | ATATTTAATTAAAAATGACA+AGG | - | chr6_1:83802475-83802494 | Msa0895650:CDS | 10.0% |
| !!! | CAAAATTTTAATGTTAAATA+CGG | - | chr6_1:83802559-83802578 | Msa0895650:CDS | 10.0% |
| !! | CAAAAATAAAAATTGTATAG+AGG | + | chr6_1:83790499-83790518 | None:intergenic | 15.0% |
| !! | GATAGAATATATCTTAATTA+AGG | + | chr6_1:83790549-83790568 | None:intergenic | 15.0% |
| !! | TACTATATAATACTAGATAT+AGG | - | chr6_1:83790651-83790670 | Msa0895650:intron | 15.0% |
| !! | TTTATATGTGAAGAAAAATA+GGG | + | chr6_1:83791938-83791957 | None:intergenic | 15.0% |
| !!! | TTTTATATGTGAAGAAAAAT+AGG | + | chr6_1:83791939-83791958 | None:intergenic | 15.0% |
| !! | TAAATTATACATTAGGTATT+AGG | + | chr6_1:83792857-83792876 | None:intergenic | 15.0% |
| !! | ATTTATACTAAATAATTCCT+TGG | - | chr6_1:83792872-83792891 | Msa0895650:intron | 15.0% |
| !! | AAAAAATGTTTAAATATGGA+TGG | + | chr6_1:83792981-83793000 | None:intergenic | 15.0% |
| !!! | CTAAATAATTTTTTTCTTTG+GGG | + | chr6_1:83793066-83793085 | None:intergenic | 15.0% |
| !!! | ATAACTGTACAATTTTAAAA+TGG | - | chr6_1:83793115-83793134 | Msa0895650:intron | 15.0% |
| !!! | TAACTGTACAATTTTAAAAT+GGG | - | chr6_1:83793116-83793135 | Msa0895650:intron | 15.0% |
| !! | AATCTTTATTATGTATCTTA+AGG | + | chr6_1:83793158-83793177 | None:intergenic | 15.0% |
| !!! | TTAAAGTGAAAATTTTATCA+AGG | + | chr6_1:83793250-83793269 | None:intergenic | 15.0% |
| !!! | CAATACTATAATTTTCTTAA+TGG | - | chr6_1:83793434-83793453 | Msa0895650:intron | 15.0% |
| !! | ACTAAAAATTTGAAAAACTA+TGG | + | chr6_1:83794232-83794251 | None:intergenic | 15.0% |
| !!! | TCTTATTAATTTTATTTGAG+TGG | + | chr6_1:83794323-83794342 | None:intergenic | 15.0% |
| !!! | TTAATATCTAGTTTAACTAA+AGG | - | chr6_1:83794371-83794390 | Msa0895650:intron | 15.0% |
| !!! | ATGGTTTTCTTAAATTATTA+AGG | + | chr6_1:83794769-83794788 | None:intergenic | 15.0% |
| !!! | TAATGTTATTTCCAAAAAAT+AGG | + | chr6_1:83794942-83794961 | None:intergenic | 15.0% |
| !! | AAAATTATTACTAGGATTTA+GGG | + | chr6_1:83795046-83795065 | None:intergenic | 15.0% |
| !! | TATGAATCAAAATTATTACT+AGG | + | chr6_1:83795054-83795073 | None:intergenic | 15.0% |
| !! | TAAAGATTATTTATGCATTT+AGG | - | chr6_1:83795290-83795309 | Msa0895650:intron | 15.0% |
| !! | AGTTAATCTTGATTATATTA+GGG | - | chr6_1:83795629-83795648 | Msa0895650:intron | 15.0% |
| !!! | TGAACATATTTTAAAACAAT+AGG | + | chr6_1:83795756-83795775 | None:intergenic | 15.0% |
| !! | TAAAACTTATCAAAGATAAA+AGG | - | chr6_1:83796093-83796112 | Msa0895650:intron | 15.0% |
| !! | AAAACTTATCAAAGATAAAA+GGG | - | chr6_1:83796094-83796113 | Msa0895650:intron | 15.0% |
| !! | TTTAGAAATGCATATTATAA+AGG | + | chr6_1:83796151-83796170 | None:intergenic | 15.0% |
| !! | TAAGATAACATATGAATATA+TGG | - | chr6_1:83796305-83796324 | Msa0895650:intron | 15.0% |
| !! | CTATTTGATAAAAATGATAA+AGG | + | chr6_1:83796361-83796380 | None:intergenic | 15.0% |
| !! | AAACAGTTTAAATTTAAACT+TGG | + | chr6_1:83797628-83797647 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTAAACAACATAA+AGG | + | chr6_1:83797763-83797782 | None:intergenic | 15.0% |
| !!! | TATTTTATTGTTACAGAAAA+TGG | - | chr6_1:83798735-83798754 | Msa0895650:intron | 15.0% |
| !! | TCAATGAAATTAATAATAGA+AGG | + | chr6_1:83799222-83799241 | None:intergenic | 15.0% |
| !! | CACGATTTAAAAATTTAATA+TGG | - | chr6_1:83799482-83799501 | Msa0895650:intron | 15.0% |
| !! | AGATAATGAATAATATATGT+AGG | - | chr6_1:83799732-83799751 | Msa0895650:intron | 15.0% |
| !! | GATAATGAATAATATATGTA+GGG | - | chr6_1:83799733-83799752 | Msa0895650:intron | 15.0% |
| !! | ATAATGAATAATATATGTAG+GGG | - | chr6_1:83799734-83799753 | Msa0895650:intron | 15.0% |
| !! | TATTTAACTAAACATAGTAT+TGG | - | chr6_1:83799986-83800005 | Msa0895650:intron | 15.0% |
| !!! | AATATAAATGATTGCATTTT+TGG | - | chr6_1:83800314-83800333 | Msa0895650:intron | 15.0% |
| !! | TAATCTCTAACTAAAAATTA+AGG | + | chr6_1:83801165-83801184 | None:intergenic | 15.0% |
| !!! | CCCATAAATTATAATTTTTT+AGG | + | chr6_1:83801266-83801285 | None:intergenic | 15.0% |
| !!! | AAAACAGAGTATTAAATTTA+AGG | + | chr6_1:83801307-83801326 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTCTTTATAGT+TGG | - | chr6_1:83801330-83801349 | Msa0895650:intron | 15.0% |
| !! | TTATTTATCTGTCAAAAAAT+TGG | - | chr6_1:83801817-83801836 | Msa0895650:intron | 15.0% |
| !!! | CAATATGTTTTTATTTTTGA+AGG | + | chr6_1:83802123-83802142 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTTTATATGGC+TGG | + | chr6_1:83802911-83802930 | None:intergenic | 15.0% |
| !! | ATATATATAAATAGCTAGTT+AGG | - | chr6_1:83802943-83802962 | Msa0895650:intron | 15.0% |
| !! | ATAAACACAAAAAAATGGTA+AGG | + | chr6_1:83790276-83790295 | None:intergenic | 20.0% |
| !! | CGTAAATAAACACAAAAAAA+TGG | + | chr6_1:83790281-83790300 | None:intergenic | 20.0% |
| !!! | CAAATTGATGATGAAATTAT+AGG | + | chr6_1:83790474-83790493 | None:intergenic | 20.0% |
| !! | ATGTAACAAAACATAGATAT+AGG | + | chr6_1:83790709-83790728 | None:intergenic | 20.0% |
| !!! | TAGATTCATCTTTTGATATA+TGG | - | chr6_1:83790894-83790913 | Msa0895650:intron | 20.0% |
| !!! | AAAAGTAGTTGTTTTTGTTT+TGG | + | chr6_1:83791038-83791057 | None:intergenic | 20.0% |
| !!! | TTCATATATTGAAACTTTTG+AGG | + | chr6_1:83791250-83791269 | None:intergenic | 20.0% |
| !! | GATCTATACTCATATTAAAA+GGG | + | chr6_1:83791512-83791531 | None:intergenic | 20.0% |
| !! | TGATCTATACTCATATTAAA+AGG | + | chr6_1:83791513-83791532 | None:intergenic | 20.0% |
| !! | AAAGTGTATGTTTAGATTAA+CGG | + | chr6_1:83791670-83791689 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTTCTTTCAATTT+TGG | - | chr6_1:83791805-83791824 | Msa0895650:intron | 20.0% |
| !! | TTCTTTCTATATTTGATCTT+TGG | - | chr6_1:83792311-83792330 | Msa0895650:intron | 20.0% |
| !! | AATGAATGTAAAAGAATTAG+AGG | - | chr6_1:83792463-83792482 | Msa0895650:intron | 20.0% |
| !! | TAATATATGAGAAAATTGTG+TGG | + | chr6_1:83792716-83792735 | None:intergenic | 20.0% |
| !! | TCTTTACATATATAAAGTGA+AGG | - | chr6_1:83793001-83793020 | Msa0895650:intron | 20.0% |
| !! | CTTTATTAAACAATGCTATT+AGG | + | chr6_1:83793043-83793062 | None:intergenic | 20.0% |
| !! | TAAAGCAAGAAATTAAGAAA+TGG | + | chr6_1:83793607-83793626 | None:intergenic | 20.0% |
| !! | TTAAAATTTCCAATGATAGA+TGG | + | chr6_1:83794080-83794099 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATTTGAGTGGT+TGG | + | chr6_1:83794319-83794338 | None:intergenic | 20.0% |
| !! | TTGGCTTAAAAAAATTATCT+AGG | + | chr6_1:83794433-83794452 | None:intergenic | 20.0% |
| !! | TTCAAATTAGTATATTGTCT+GGG | + | chr6_1:83794518-83794537 | None:intergenic | 20.0% |
| !! | TTTCAAATTAGTATATTGTC+TGG | + | chr6_1:83794519-83794538 | None:intergenic | 20.0% |
| !! | AATAATTCATATTCTCTATG+AGG | + | chr6_1:83794664-83794683 | None:intergenic | 20.0% |
| !! | TTCAATGTAATAATATGTGT+CGG | - | chr6_1:83794793-83794812 | Msa0895650:intron | 20.0% |
| !!! | CAATAAGATATCCTATTTTT+TGG | - | chr6_1:83794928-83794947 | Msa0895650:intron | 20.0% |
| !! | CAAAATTATTACTAGGATTT+AGG | + | chr6_1:83795047-83795066 | None:intergenic | 20.0% |
| !!! | ATTTTGATTCATAATTGAGT+TGG | - | chr6_1:83795061-83795080 | Msa0895650:intron | 20.0% |
| !! | AATAAAAGATAAAATAGGTG+TGG | - | chr6_1:83795265-83795284 | Msa0895650:intron | 20.0% |
| !! | GAGTTAATCTTGATTATATT+AGG | - | chr6_1:83795628-83795647 | Msa0895650:intron | 20.0% |
| !!! | ATAAGAGAGTTTTTTTTTGA+AGG | - | chr6_1:83795678-83795697 | Msa0895650:intron | 20.0% |
| !!! | CATATTTTAAAACAATAGGT+AGG | + | chr6_1:83795752-83795771 | None:intergenic | 20.0% |
| !! | TCTCAAAAATAGTTTAAAGA+TGG | - | chr6_1:83796003-83796022 | Msa0895650:intron | 20.0% |
| !! | CTCAAAAATAGTTTAAAGAT+GGG | - | chr6_1:83796004-83796023 | Msa0895650:intron | 20.0% |
| !! | CTAATATGAATATGATTCAA+TGG | + | chr6_1:83796124-83796143 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTTTTCAATTGAT+GGG | + | chr6_1:83797126-83797145 | None:intergenic | 20.0% |
| !! | TTAAATTTATCCTATCCTAT+TGG | - | chr6_1:83797353-83797372 | Msa0895650:intron | 20.0% |
| !! | TACAGTAAAATATTGATCAT+AGG | - | chr6_1:83797686-83797705 | Msa0895650:intron | 20.0% |
| !! | ACAGTAAAATATTGATCATA+GGG | - | chr6_1:83797687-83797706 | Msa0895650:intron | 20.0% |
| !! | TTTAACTACTCGTTATTTAA+TGG | - | chr6_1:83798072-83798091 | Msa0895650:intron | 20.0% |
| !!! | AGTTGTTGATTTCTAAATAT+GGG | + | chr6_1:83798641-83798660 | None:intergenic | 20.0% |
| !!! | AAGTTGTTGATTTCTAAATA+TGG | + | chr6_1:83798642-83798661 | None:intergenic | 20.0% |
| !! | AATATATTTGAGGACTATAA+TGG | + | chr6_1:83799173-83799192 | None:intergenic | 20.0% |
| !!! | TTATTTTGTAATGAGTTTAG+TGG | + | chr6_1:83799637-83799656 | None:intergenic | 20.0% |
| !!! | AACATTAAACTATTTTTGAG+AGG | + | chr6_1:83800399-83800418 | None:intergenic | 20.0% |
| !! | TAAACTTTAGTAAAAATGGT+AGG | - | chr6_1:83800489-83800508 | Msa0895650:intron | 20.0% |
| !! | AAACTTTAGTAAAAATGGTA+GGG | - | chr6_1:83800490-83800509 | Msa0895650:intron | 20.0% |
| !! | AAGCTACTTATAGAAAATAA+GGG | + | chr6_1:83800548-83800567 | None:intergenic | 20.0% |
| !! | TAAGCTACTTATAGAAAATA+AGG | + | chr6_1:83800549-83800568 | None:intergenic | 20.0% |
| !! | TAATGAATAAAATCAGAATG+TGG | + | chr6_1:83800611-83800630 | None:intergenic | 20.0% |
| !!! | AAATCGCTATTTTAAAACAT+GGG | + | chr6_1:83801108-83801127 | None:intergenic | 20.0% |
| !!! | AAAATCGCTATTTTAAAACA+TGG | + | chr6_1:83801109-83801128 | None:intergenic | 20.0% |
| !! | CAAGAATAAATAATGAGTAT+GGG | + | chr6_1:83801677-83801696 | None:intergenic | 20.0% |
| !! | ACAAGAATAAATAATGAGTA+TGG | + | chr6_1:83801678-83801697 | None:intergenic | 20.0% |
| !! | AAAAATAGTATAGTTAACGT+GGG | + | chr6_1:83801729-83801748 | None:intergenic | 20.0% |
| !! | AAAAAATAGTATAGTTAACG+TGG | + | chr6_1:83801730-83801749 | None:intergenic | 20.0% |
| !!! | CGTTAACTATACTATTTTTT+TGG | - | chr6_1:83801730-83801749 | Msa0895650:intron | 20.0% |
| !!! | TTTTTAGTATAGAATAAGTG+AGG | + | chr6_1:83802061-83802080 | None:intergenic | 20.0% |
| !! | ATTCTATACTAAAAATAGCT+AGG | - | chr6_1:83802066-83802085 | Msa0895650:CDS | 20.0% |
| !! | ATAAGTATGAACCTAAAAAA+TGG | + | chr6_1:83802513-83802532 | None:intergenic | 20.0% |
| !!! | TTTTTAGGTTCATACTTATT+CGG | - | chr6_1:83802514-83802533 | Msa0895650:CDS | 20.0% |
| !! | TACAAACATCATATATGATA+CGG | + | chr6_1:83802687-83802706 | None:intergenic | 20.0% |
| !!! | AAATTAATTTTATCTCCCTA+AGG | + | chr6_1:83802824-83802843 | None:intergenic | 20.0% |
| !! | TTAGTTATTTACATGATTCA+TGG | - | chr6_1:83802843-83802862 | Msa0895650:intron | 20.0% |
| !! | AAGTAAAAGTTGAAAAAAGA+AGG | - | chr6_1:83803077-83803096 | Msa0895650:five_prime_UTR | 20.0% |
| !! | TTTTATGAAGCTCATGATAA+AGG | - | chr6_1:83790385-83790404 | Msa0895650:three_prime_UTR | 25.0% |
| ! | TTTATGAAGCTCATGATAAA+GGG | - | chr6_1:83790386-83790405 | Msa0895650:three_prime_UTR | 25.0% |
| !!! | TTAATTGTAAAGAGGTACTT+TGG | + | chr6_1:83790523-83790542 | None:intergenic | 25.0% |
| ! | TAAGGTGATTAATTGTAAAG+AGG | + | chr6_1:83790531-83790550 | None:intergenic | 25.0% |
| ! | GATTGTTATCACTATAAAGA+GGG | + | chr6_1:83791123-83791142 | None:intergenic | 25.0% |
| ! | GAATCTTTCTCTATTATAGA+AGG | + | chr6_1:83791145-83791164 | None:intergenic | 25.0% |
| !!! | CTAGTTTTTCAACTTTTTCA+AGG | - | chr6_1:83791194-83791213 | Msa0895650:intron | 25.0% |
| !!! | TCAACTTTTTCAAGGTTTAA+TGG | - | chr6_1:83791202-83791221 | Msa0895650:intron | 25.0% |
| ! | GTTCTATTATTGAGAAATGA+TGG | + | chr6_1:83792183-83792202 | None:intergenic | 25.0% |
| ! | TGTTTGGTAAGATAAGTAAT+TGG | + | chr6_1:83792205-83792224 | None:intergenic | 25.0% |
| !!! | AACAATAAGGTTGATATGTT+TGG | + | chr6_1:83792221-83792240 | None:intergenic | 25.0% |
| ! | TTCTCTTTCAAGATTTCAAA+GGG | + | chr6_1:83792361-83792380 | None:intergenic | 25.0% |
| ! | TTTCTCTTTCAAGATTTCAA+AGG | + | chr6_1:83792362-83792381 | None:intergenic | 25.0% |
| !!! | TGAGGTTTTTTTTTTTGCAA+CGG | + | chr6_1:83792555-83792574 | None:intergenic | 25.0% |
| ! | ATCGTTCGATCTTAAATTAA+TGG | + | chr6_1:83792668-83792687 | None:intergenic | 25.0% |
| ! | AATCTTAATTGTCCTTCTAT+TGG | - | chr6_1:83792752-83792771 | Msa0895650:intron | 25.0% |
| !!! | ATTGTTAATTTGTGCACTTA+GGG | + | chr6_1:83793288-83793307 | None:intergenic | 25.0% |
| !!! | AATTGTTAATTTGTGCACTT+AGG | + | chr6_1:83793289-83793308 | None:intergenic | 25.0% |
| ! | AATGCTAACAAGTGTATTTA+GGG | + | chr6_1:83793348-83793367 | None:intergenic | 25.0% |
| ! | AAATGCTAACAAGTGTATTT+AGG | + | chr6_1:83793349-83793368 | None:intergenic | 25.0% |
| ! | ATATAATGCAATGTAACAGA+TGG | - | chr6_1:83793461-83793480 | Msa0895650:intron | 25.0% |
| !!! | TAGTTCTTATTTTGATCATG+AGG | + | chr6_1:83793515-83793534 | None:intergenic | 25.0% |
| ! | TATATATATGCATGAATGCA+TGG | - | chr6_1:83793710-83793729 | Msa0895650:intron | 25.0% |
| !! | TTTTGTGTTTCACAAAAGAA+TGG | + | chr6_1:83793742-83793761 | None:intergenic | 25.0% |
| ! | TTGATCTAAAAAAGCAGAAT+TGG | + | chr6_1:83793808-83793827 | None:intergenic | 25.0% |
| ! | TAAAGAACTTGTACCAAAAA+GGG | + | chr6_1:83793860-83793879 | None:intergenic | 25.0% |
| ! | TTAAAGAACTTGTACCAAAA+AGG | + | chr6_1:83793861-83793880 | None:intergenic | 25.0% |
| ! | GTAAACAAGTTAATATAGAG+AGG | + | chr6_1:83794039-83794058 | None:intergenic | 25.0% |
| !!! | TTTTTAGTCAACTTACCTAA+TGG | - | chr6_1:83794244-83794263 | Msa0895650:intron | 25.0% |
| !! | TTTTAGTCAACTTACCTAAT+GGG | - | chr6_1:83794245-83794264 | Msa0895650:intron | 25.0% |
| ! | ATAAGTTCGAATCATATCAA+TGG | + | chr6_1:83794598-83794617 | None:intergenic | 25.0% |
| ! | AAATACTATAAAGCCAACAT+TGG | - | chr6_1:83795494-83795513 | Msa0895650:intron | 25.0% |
| ! | AATACTATAAAGCCAACATT+GGG | - | chr6_1:83795495-83795514 | Msa0895650:intron | 25.0% |
| ! | TTAGGCTTAAATCAAGAATT+CGG | + | chr6_1:83795821-83795840 | None:intergenic | 25.0% |
| ! | ACCATAGTTAGGTTAAATTT+AGG | + | chr6_1:83795839-83795858 | None:intergenic | 25.0% |
| ! | TAAAATGCAAAACTAAGAGA+TGG | - | chr6_1:83795951-83795970 | Msa0895650:intron | 25.0% |
| ! | CTAAGAGATGGTTTATTAAT+AGG | - | chr6_1:83795963-83795982 | Msa0895650:intron | 25.0% |
| ! | ATTAATAGGTCAATCTAACA+AGG | - | chr6_1:83795977-83795996 | Msa0895650:intron | 25.0% |
| !! | TAAGGTATCACTTTCTTAAA+AGG | - | chr6_1:83796187-83796206 | Msa0895650:intron | 25.0% |
| ! | TCACTTTCTTAAAAGGATTA+AGG | - | chr6_1:83796194-83796213 | Msa0895650:intron | 25.0% |
| ! | ATGATATTTGTTTGTAGGTT+GGG | + | chr6_1:83796512-83796531 | None:intergenic | 25.0% |
| ! | AATGATATTTGTTTGTAGGT+TGG | + | chr6_1:83796513-83796532 | None:intergenic | 25.0% |
| ! | GTTGAATGATATTTGTTTGT+AGG | + | chr6_1:83796517-83796536 | None:intergenic | 25.0% |
| ! | GACAAAATATGATAAAGAAC+TGG | - | chr6_1:83796604-83796623 | Msa0895650:intron | 25.0% |
| ! | ATTTAATCCTATCATGTGTT+TGG | - | chr6_1:83796712-83796731 | Msa0895650:intron | 25.0% |
| ! | GGAAAACAAAGAAATTGATT+TGG | - | chr6_1:83797050-83797069 | Msa0895650:intron | 25.0% |
| !!! | TGGAAAAACAATTTTGAGTA+AGG | - | chr6_1:83797070-83797089 | Msa0895650:intron | 25.0% |
| !!! | GTTCTTTGTTTTTCAATTGA+TGG | + | chr6_1:83797127-83797146 | None:intergenic | 25.0% |
| ! | ATTTGAATGGTTATGAAGAA+TGG | - | chr6_1:83797182-83797201 | Msa0895650:intron | 25.0% |
| ! | AAGTCAATAGATTTGTGATT+TGG | - | chr6_1:83797263-83797282 | Msa0895650:intron | 25.0% |
| !! | ATAGGATAGGATTAGTAATA+TGG | - | chr6_1:83797329-83797348 | Msa0895650:intron | 25.0% |
| !! | TAGGATAGGATTAGTAATAT+GGG | - | chr6_1:83797330-83797349 | Msa0895650:intron | 25.0% |
| ! | TAGAATGTGTGTATCTAAAA+TGG | - | chr6_1:83797478-83797497 | Msa0895650:intron | 25.0% |
| ! | TCAGTCTAATATATGTATGA+TGG | + | chr6_1:83797505-83797524 | None:intergenic | 25.0% |
| ! | AAATCTTTGAATGTCTACAT+CGG | + | chr6_1:83797544-83797563 | None:intergenic | 25.0% |
| ! | TAAAGGTTCAATCTTGAAAA+TGG | + | chr6_1:83797746-83797765 | None:intergenic | 25.0% |
| ! | GATACATTGATAGATATTCA+TGG | - | chr6_1:83798032-83798051 | Msa0895650:intron | 25.0% |
| ! | ATATGTAAATGGATATGCAT+TGG | + | chr6_1:83798157-83798176 | None:intergenic | 25.0% |
| ! | GTCTATACTAGATATGTAAA+TGG | + | chr6_1:83798168-83798187 | None:intergenic | 25.0% |
| !! | AAACAAGATCATCTTCTTTT+TGG | + | chr6_1:83798372-83798391 | None:intergenic | 25.0% |
| !! | GAAGATGATCTTGTTTATAT+TGG | - | chr6_1:83798376-83798395 | Msa0895650:intron | 25.0% |
| ! | GAAGACTTATAAGAATTGTT+TGG | + | chr6_1:83798407-83798426 | None:intergenic | 25.0% |
| ! | TTATTGTTACAGAAAATGGT+AGG | - | chr6_1:83798739-83798758 | Msa0895650:intron | 25.0% |
| !!! | GTTCACTTTAGTCTATTTTT+AGG | - | chr6_1:83798771-83798790 | Msa0895650:intron | 25.0% |
| ! | TAATAACTCGTTCATATTCA+AGG | - | chr6_1:83798926-83798945 | Msa0895650:intron | 25.0% |
| ! | TTTAAGTCATGCATGTATTA+GGG | - | chr6_1:83799096-83799115 | Msa0895650:intron | 25.0% |
| ! | ATGTATTAGGGAAATAATTG+AGG | - | chr6_1:83799108-83799127 | Msa0895650:intron | 25.0% |
| !! | TTGAGGTTAAACAGTTATTT+TGG | - | chr6_1:83799125-83799144 | Msa0895650:intron | 25.0% |
| ! | TTCTGATCTCAATATATTTG+AGG | + | chr6_1:83799183-83799202 | None:intergenic | 25.0% |
| !! | AAGATCACACATTTTAAATG+TGG | + | chr6_1:83799791-83799810 | None:intergenic | 25.0% |
| ! | ATGATGTATGTACATTTGAT+AGG | - | chr6_1:83799905-83799924 | Msa0895650:intron | 25.0% |
| ! | TGATGTATGTACATTTGATA+GGG | - | chr6_1:83799906-83799925 | Msa0895650:intron | 25.0% |
| ! | AGCTACTTATAGAAAATAAG+GGG | + | chr6_1:83800547-83800566 | None:intergenic | 25.0% |
| ! | GTGAAATGTGTTTGTAAAAA+AGG | - | chr6_1:83800578-83800597 | Msa0895650:CDS | 25.0% |
| ! | GAAAATTGTTTATATACCAG+AGG | - | chr6_1:83800633-83800652 | Msa0895650:intron | 25.0% |
| ! | TACCCCAAATAATAAACATT+GGG | - | chr6_1:83800798-83800817 | Msa0895650:intron | 25.0% |
| ! | TAGCCCAATGTTTATTATTT+GGG | + | chr6_1:83800804-83800823 | None:intergenic | 25.0% |
| !!! | TTTTGCAACTAAACTTGTTT+GGG | + | chr6_1:83800828-83800847 | None:intergenic | 25.0% |
| !!! | TTTTTGCAACTAAACTTGTT+TGG | + | chr6_1:83800829-83800848 | None:intergenic | 25.0% |
| !!! | AATCGCTATTTTAAAACATG+GGG | + | chr6_1:83801107-83801126 | None:intergenic | 25.0% |
| ! | ATACATACAAGGAAAATAGT+AGG | + | chr6_1:83801430-83801449 | None:intergenic | 25.0% |
| ! | AAAAGACTAGAAGTTGTATT+TGG | + | chr6_1:83801523-83801542 | None:intergenic | 25.0% |
| ! | AACTTTGATATGTGCAATAA+TGG | - | chr6_1:83801606-83801625 | Msa0895650:intron | 25.0% |
| ! | TATATGACAATGACATATGA+TGG | - | chr6_1:83801875-83801894 | Msa0895650:intron | 25.0% |
| ! | ATATGACAATGACATATGAT+GGG | - | chr6_1:83801876-83801895 | Msa0895650:intron | 25.0% |
| ! | TATAGAATAAGTGAGGATTA+GGG | + | chr6_1:83802054-83802073 | None:intergenic | 25.0% |
| ! | ATCTAAGGATTAATTCATGT+GGG | + | chr6_1:83802362-83802381 | None:intergenic | 25.0% |
| ! | TATCTAAGGATTAATTCATG+TGG | + | chr6_1:83802363-83802382 | None:intergenic | 25.0% |
| !!! | TTCACTTTAGACTGTTTTTT+AGG | + | chr6_1:83802412-83802431 | None:intergenic | 25.0% |
| !!! | GTAACTTTAGACCATTTTTT+AGG | - | chr6_1:83802499-83802518 | Msa0895650:CDS | 25.0% |
| ! | TCCTTTCAAAAAATGATTCA+TGG | - | chr6_1:83802869-83802888 | Msa0895650:intron | 25.0% |
| !!! | TCCATGAATCATTTTTTGAA+AGG | + | chr6_1:83802873-83802892 | None:intergenic | 25.0% |
| !!! | TTTTTTAGCCGAAGATTATT+AGG | - | chr6_1:83803027-83803046 | Msa0895650:five_prime_UTR | 25.0% |
| ! | AATTCTCCTTTGTTTGTTTC+AGG | - | chr6_1:83790741-83790760 | Msa0895650:intron | 30.0% |
| TTTCAACCTGAAACAAACAA+AGG | + | chr6_1:83790750-83790769 | None:intergenic | 30.0% | |
| ! | GAAATTTGAAGTGAAAGATC+AGG | + | chr6_1:83790824-83790843 | None:intergenic | 30.0% |
| CAAATTGATGAAGAACTGTT+TGG | + | chr6_1:83790851-83790870 | None:intergenic | 30.0% | |
| AATGATGCTATTACTCATGA+AGG | - | chr6_1:83790926-83790945 | Msa0895650:intron | 30.0% | |
| GGATTGTTATCACTATAAAG+AGG | + | chr6_1:83791124-83791143 | None:intergenic | 30.0% | |
| CAGTTTGGAAATTCTGAATT+TGG | - | chr6_1:83791319-83791338 | Msa0895650:intron | 30.0% | |
| GGAAATTCTGAATTTGGAAA+TGG | - | chr6_1:83791325-83791344 | Msa0895650:intron | 30.0% | |
| ! | AATTTGGAAATGGATTTGTG+AGG | - | chr6_1:83791335-83791354 | Msa0895650:intron | 30.0% |
| ! | CTCTTATTACTTTGTTGTCT+TGG | + | chr6_1:83791376-83791395 | None:intergenic | 30.0% |
| CAAGACAACAAAGTAATAAG+AGG | - | chr6_1:83791374-83791393 | Msa0895650:CDS | 30.0% | |
| AAAGTAATAAGAGGAACATG+AGG | - | chr6_1:83791383-83791402 | Msa0895650:CDS | 30.0% | |
| AAGTAATAAGAGGAACATGA+GGG | - | chr6_1:83791384-83791403 | Msa0895650:CDS | 30.0% | |
| AGAGAAGAGATATACTTTCA+TGG | + | chr6_1:83791477-83791496 | None:intergenic | 30.0% | |
| GTGAATTTGACAAAATCTCA+GGG | - | chr6_1:83791580-83791599 | Msa0895650:intron | 30.0% | |
| ! | TCCTTTCTTTCAATTTTGGA+TGG | - | chr6_1:83791809-83791828 | Msa0895650:intron | 30.0% |
| ACCATCCAAAATTGAAAGAA+AGG | + | chr6_1:83791813-83791832 | None:intergenic | 30.0% | |
| ! | TTCTTTCAATTTTGGATGGT+AGG | - | chr6_1:83791813-83791832 | Msa0895650:intron | 30.0% |
| ! | ATTAGCTCCAAAACTGATTT+AGG | + | chr6_1:83791846-83791865 | None:intergenic | 30.0% |
| !!! | TAAATCAGTTTTGGAGCTAA+TGG | - | chr6_1:83791845-83791864 | Msa0895650:intron | 30.0% |
| TTAGAAGATAGAGTAGACTT+TGG | + | chr6_1:83792018-83792037 | None:intergenic | 30.0% | |
| !!! | AAATTTTGGAACAAAGACCA+AGG | + | chr6_1:83792892-83792911 | None:intergenic | 30.0% |
| !! | GTAAAGTGGACTTCAAATTT+TGG | + | chr6_1:83792906-83792925 | None:intergenic | 30.0% |
| TTCACAGGAATTAAGTAAAG+TGG | + | chr6_1:83792920-83792939 | None:intergenic | 30.0% | |
| !! | TATGGATGGATTAATACAGT+GGG | + | chr6_1:83792967-83792986 | None:intergenic | 30.0% |
| !! | ATATGGATGGATTAATACAG+TGG | + | chr6_1:83792968-83792987 | None:intergenic | 30.0% |
| AAAGAACTTGTACCAAAAAG+GGG | + | chr6_1:83793859-83793878 | None:intergenic | 30.0% | |
| TAACCTAGATGAATTCTTAG+TGG | - | chr6_1:83793910-83793929 | Msa0895650:intron | 30.0% | |
| AAACCACTAAGAATTCATCT+AGG | + | chr6_1:83793916-83793935 | None:intergenic | 30.0% | |
| !! | GAAAGTATTCAACAATCGTT+AGG | + | chr6_1:83793979-83793998 | None:intergenic | 30.0% |
| CGATTGTTGAATACTTTCTA+TGG | - | chr6_1:83793981-83794000 | Msa0895650:intron | 30.0% | |
| CAATGATAGATGGCTAAAAA+AGG | + | chr6_1:83794070-83794089 | None:intergenic | 30.0% | |
| !!! | CTTTTTTAGCCATCTATCAT+TGG | - | chr6_1:83794068-83794087 | Msa0895650:intron | 30.0% |
| !! | TACAAAAGGTACTATTTCAC+TGG | + | chr6_1:83794177-83794196 | None:intergenic | 30.0% |
| TCACGAAGCTAAAATACAAA+AGG | + | chr6_1:83794191-83794210 | None:intergenic | 30.0% | |
| TTCGTGAAAGATTAATGCTT+TGG | - | chr6_1:83794204-83794223 | Msa0895650:intron | 30.0% | |
| !! | GGTATTGATTTATTGCATGA+AGG | + | chr6_1:83794568-83794587 | None:intergenic | 30.0% |
| AATCATATCAATGGAGATCT+TGG | + | chr6_1:83794589-83794608 | None:intergenic | 30.0% | |
| CATTATATGAAGCATGTGTA+CGG | - | chr6_1:83794696-83794715 | Msa0895650:intron | 30.0% | |
| ! | TTGATCTAAAACATGTGTCT+TGG | - | chr6_1:83794877-83794896 | Msa0895650:intron | 30.0% |
| !!! | TCACGTTATTTTTCTGCAAT+AGG | - | chr6_1:83795132-83795151 | Msa0895650:intron | 30.0% |
| !!! | CACGTTATTTTTCTGCAATA+GGG | - | chr6_1:83795133-83795152 | Msa0895650:intron | 30.0% |
| ATATATAGGTCCAGTTGTAT+TGG | - | chr6_1:83795775-83795794 | Msa0895650:intron | 30.0% | |
| GCCTAAATTTAACCTAACTA+TGG | - | chr6_1:83795835-83795854 | Msa0895650:intron | 30.0% | |
| TTTAACCTAACTATGGTCTT+TGG | - | chr6_1:83795842-83795861 | Msa0895650:intron | 30.0% | |
| ! | AAAAGCGCAAAACTCAAAAA+GGG | + | chr6_1:83796244-83796263 | None:intergenic | 30.0% |
| ! | TAAAAGCGCAAAACTCAAAA+AGG | + | chr6_1:83796245-83796264 | None:intergenic | 30.0% |
| ACTCTTATCTATCTTAAGTG+TGG | + | chr6_1:83796539-83796558 | None:intergenic | 30.0% | |
| CACTTATCATATCCTATGTT+TGG | - | chr6_1:83796659-83796678 | Msa0895650:intron | 30.0% | |
| ATCATGTGTTAACCAAACAT+AGG | + | chr6_1:83796674-83796693 | None:intergenic | 30.0% | |
| ! | AAAAAAAAAACGGAAGCACA+CGG | - | chr6_1:83797021-83797040 | Msa0895650:intron | 30.0% |
| !! | CAATTTTGAGTAAGGAATCA+TGG | - | chr6_1:83797078-83797097 | Msa0895650:intron | 30.0% |
| TGAAAAACAAAGAACTGACA+TGG | - | chr6_1:83797132-83797151 | Msa0895650:intron | 30.0% | |
| GAGTTGGGAAAAAATTTGAA+TGG | - | chr6_1:83797169-83797188 | Msa0895650:intron | 30.0% | |
| ! | TCAATAGATTTGTGATTTGG+TGG | - | chr6_1:83797266-83797285 | Msa0895650:intron | 30.0% |
| !! | CAATAGATTTGTGATTTGGT+GGG | - | chr6_1:83797267-83797286 | Msa0895650:intron | 30.0% |
| ATCTTTGCTTCTATCTTTGA+GGG | + | chr6_1:83797459-83797478 | None:intergenic | 30.0% | |
| TATCTTTGCTTCTATCTTTG+AGG | + | chr6_1:83797460-83797479 | None:intergenic | 30.0% | |
| GTCCATTAATAATACAGGTT+TGG | - | chr6_1:83797717-83797736 | Msa0895650:intron | 30.0% | |
| CTCCAAACCTGTATTATTAA+TGG | + | chr6_1:83797722-83797741 | None:intergenic | 30.0% | |
| TGTCTATATGACACTTGTTT+GGG | + | chr6_1:83797876-83797895 | None:intergenic | 30.0% | |
| ATGTCTATATGACACTTGTT+TGG | + | chr6_1:83797877-83797896 | None:intergenic | 30.0% | |
| ACAATTGAGAGAGGTAAAAA+GGG | + | chr6_1:83797908-83797927 | None:intergenic | 30.0% | |
| AACAATTGAGAGAGGTAAAA+AGG | + | chr6_1:83797909-83797928 | None:intergenic | 30.0% | |
| ATGATCTCTTTGTTCAGTTT+AGG | + | chr6_1:83797940-83797959 | None:intergenic | 30.0% | |
| ACTGAACAAAGAGATCATAT+AGG | - | chr6_1:83797942-83797961 | Msa0895650:intron | 30.0% | |
| ! | ATTTTATCCGCATATATCCA+CGG | + | chr6_1:83797993-83798012 | None:intergenic | 30.0% |
| GGATACATATGTAGATTTGA+TGG | - | chr6_1:83798093-83798112 | Msa0895650:intron | 30.0% | |
| ! | GTAGATTTGATGGTATCTAA+CGG | - | chr6_1:83798103-83798122 | Msa0895650:intron | 30.0% |
| ! | TAGATTTGATGGTATCTAAC+GGG | - | chr6_1:83798104-83798123 | Msa0895650:intron | 30.0% |
| TGACCATAATCCTCAAATAA+AGG | - | chr6_1:83798585-83798604 | Msa0895650:intron | 30.0% | |
| ! | ACTCCTTTATTTGAGGATTA+TGG | + | chr6_1:83798591-83798610 | None:intergenic | 30.0% |
| TAGAAATCAACAACTTCCAA+AGG | - | chr6_1:83798646-83798665 | Msa0895650:intron | 30.0% | |
| GACTGATAATATGAAACCTT+TGG | + | chr6_1:83798665-83798684 | None:intergenic | 30.0% | |
| AACATAGAATGTTAGCAAAG+TGG | + | chr6_1:83798702-83798721 | None:intergenic | 30.0% | |
| GATCAAGACAAACTTATTCA+TGG | - | chr6_1:83798805-83798824 | Msa0895650:intron | 30.0% | |
| CTTTAAGTCATGCATGTATT+AGG | - | chr6_1:83799095-83799114 | Msa0895650:intron | 30.0% | |
| ! | AATAATAGAAGGCACATTCA+TGG | + | chr6_1:83799211-83799230 | None:intergenic | 30.0% |
| TTAAAGATTATCGTCACTCA+AGG | - | chr6_1:83799296-83799315 | Msa0895650:intron | 30.0% | |
| GGAAAAATTTAAGTCCTACA+TGG | - | chr6_1:83799381-83799400 | Msa0895650:intron | 30.0% | |
| ! | TTTGGTAAGAGTGTATAATG+TGG | - | chr6_1:83799417-83799436 | Msa0895650:intron | 30.0% |
| ! | ATTTTAAATGTGGAGAAGTG+GGG | + | chr6_1:83799781-83799800 | None:intergenic | 30.0% |
| ! | CATTTTAAATGTGGAGAAGT+GGG | + | chr6_1:83799782-83799801 | None:intergenic | 30.0% |
| ! | ACATTTTAAATGTGGAGAAG+TGG | + | chr6_1:83799783-83799802 | None:intergenic | 30.0% |
| ! | ATTGGTGTTCCTTGAAAATT+AGG | - | chr6_1:83800004-83800023 | Msa0895650:intron | 30.0% |
| ACACACCCTAAATATGATTA+GGG | - | chr6_1:83800031-83800050 | Msa0895650:intron | 30.0% | |
| TCATGTTGTAATGAGTTTAG+TGG | + | chr6_1:83800060-83800079 | None:intergenic | 30.0% | |
| !!! | TGCATTTTTGGTATGTTTCT+AGG | - | chr6_1:83800326-83800345 | Msa0895650:intron | 30.0% |
| !!! | ATTTTTGGTATGTTTCTAGG+AGG | - | chr6_1:83800329-83800348 | Msa0895650:intron | 30.0% |
| TACTAACAAATTCATACTGC+AGG | - | chr6_1:83800687-83800706 | Msa0895650:intron | 30.0% | |
| ACTAACAAATTCATACTGCA+GGG | - | chr6_1:83800688-83800707 | Msa0895650:intron | 30.0% | |
| AGTGGGTATGTATTTATATC+CGG | - | chr6_1:83800774-83800793 | Msa0895650:intron | 30.0% | |
| CTACCCCAAATAATAAACAT+TGG | - | chr6_1:83800797-83800816 | Msa0895650:intron | 30.0% | |
| AGCCCAATGTTTATTATTTG+GGG | + | chr6_1:83800803-83800822 | None:intergenic | 30.0% | |
| GTAGCCCAATGTTTATTATT+TGG | + | chr6_1:83800805-83800824 | None:intergenic | 30.0% | |
| ! | TTTGCAACTAAACTTGTTTG+GGG | + | chr6_1:83800827-83800846 | None:intergenic | 30.0% |
| AGGCAGTTATTGATGAAATT+GGG | - | chr6_1:83801063-83801082 | Msa0895650:intron | 30.0% | |
| ATGCAAAGTAGTATGAACAA+CGG | + | chr6_1:83801384-83801403 | None:intergenic | 30.0% | |
| AGATTACAAGCATACATACA+AGG | + | chr6_1:83801441-83801460 | None:intergenic | 30.0% | |
| ATATTAATGACTGGCAGTAA+TGG | - | chr6_1:83801930-83801949 | Msa0895650:CDS | 30.0% | |
| !!! | TAGTTCTGGAAATCATTTTG+AGG | - | chr6_1:83801968-83801987 | Msa0895650:CDS | 30.0% |
| GTATAGAATAAGTGAGGATT+AGG | + | chr6_1:83802055-83802074 | None:intergenic | 30.0% | |
| ! | TTGGACATTTGAGATTTACT+TGG | - | chr6_1:83802169-83802188 | Msa0895650:CDS | 30.0% |
| AACTCACTCAAATTAGCATT+AGG | + | chr6_1:83802247-83802266 | None:intergenic | 30.0% | |
| ATGATGTTCATCATTAGATC+AGG | - | chr6_1:83802315-83802334 | Msa0895650:CDS | 30.0% | |
| CCAATATGTTGCAATATCTA+AGG | + | chr6_1:83802377-83802396 | None:intergenic | 30.0% | |
| CCTTAGATATTGCAACATAT+TGG | - | chr6_1:83802374-83802393 | Msa0895650:CDS | 30.0% | |
| AATATACACACCAAAGTCAA+AGG | + | chr6_1:83802591-83802610 | None:intergenic | 30.0% | |
| TAAACAATCAAGAAGTTCCA+AGG | - | chr6_1:83802759-83802778 | Msa0895650:intron | 30.0% | |
| ! | TATTTTATATGGCTGGTACT+TGG | + | chr6_1:83802904-83802923 | None:intergenic | 30.0% |
| AAAGCATATACAAGGTTTCT+TGG | + | chr6_1:83803009-83803028 | None:intergenic | 30.0% | |
| ! | GGCTAAAAAAAGCATATACA+AGG | + | chr6_1:83803017-83803036 | None:intergenic | 30.0% |
| TATCACCACCTAATAATCTT+CGG | + | chr6_1:83803038-83803057 | None:intergenic | 30.0% | |
| AAAAATGGTAAGGAGAGAGA+AGG | + | chr6_1:83790266-83790285 | None:intergenic | 35.0% | |
| ! | GATATAGGACAATCAAGTTG+AGG | + | chr6_1:83790694-83790713 | None:intergenic | 35.0% |
| GGTTTCAAATCTCATAGTGA+TGG | - | chr6_1:83790947-83790966 | Msa0895650:intron | 35.0% | |
| GTTAGATTAAGACCCTTCAA+TGG | - | chr6_1:83791094-83791113 | Msa0895650:intron | 35.0% | |
| TAAAGAGGGATTCCATTGAA+GGG | + | chr6_1:83791109-83791128 | None:intergenic | 35.0% | |
| ATAAAGAGGGATTCCATTGA+AGG | + | chr6_1:83791110-83791129 | None:intergenic | 35.0% | |
| GAAAAACTAGCAGAACAAGA+AGG | + | chr6_1:83791184-83791203 | None:intergenic | 35.0% | |
| ATCATCTGCACCAATACAAT+TGG | - | chr6_1:83791529-83791548 | Msa0895650:intron | 35.0% | |
| CACCAATACAATTGGATTGT+TGG | - | chr6_1:83791537-83791556 | Msa0895650:intron | 35.0% | |
| GACCAACAATCCAATTGTAT+TGG | + | chr6_1:83791542-83791561 | None:intergenic | 35.0% | |
| GGTCTGTATGTTTAGATTGA+CGG | - | chr6_1:83791558-83791577 | Msa0895650:intron | 35.0% | |
| GGTGAATTTGACAAAATCTC+AGG | - | chr6_1:83791579-83791598 | Msa0895650:intron | 35.0% | |
| ! | ATTATCGATTGTAGTGTCGT+TGG | - | chr6_1:83791694-83791713 | Msa0895650:intron | 35.0% |
| ! | AGCTACTCCTAAATCAGTTT+TGG | - | chr6_1:83791836-83791855 | Msa0895650:intron | 35.0% |
| TCATGTCAAGAGTCATTTAC+AGG | - | chr6_1:83791890-83791909 | Msa0895650:intron | 35.0% | |
| AGTCTACTCTATCTTCTAAG+AGG | - | chr6_1:83792019-83792038 | Msa0895650:intron | 35.0% | |
| CATGAAAAGTAGAACTTGTC+TGG | + | chr6_1:83792118-83792137 | None:intergenic | 35.0% | |
| TTAATTGAACAAACCCCTAG+AGG | - | chr6_1:83792246-83792265 | Msa0895650:intron | 35.0% | |
| ! | AGATGCTTCTTTTTCCTCTA+GGG | + | chr6_1:83792263-83792282 | None:intergenic | 35.0% |
| AGTCATTGAGTTAAGATCGA+TGG | - | chr6_1:83792599-83792618 | Msa0895650:intron | 35.0% | |
| TTGATCATGAGGTTGTGTTA+GGG | + | chr6_1:83793504-83793523 | None:intergenic | 35.0% | |
| TTTGATCATGAGGTTGTGTT+AGG | + | chr6_1:83793505-83793524 | None:intergenic | 35.0% | |
| GCATCTCTAGATCATGATAT+TGG | - | chr6_1:83793539-83793558 | Msa0895650:intron | 35.0% | |
| CTACACTTCCAACATTCTAT+GGG | - | chr6_1:83793562-83793581 | Msa0895650:intron | 35.0% | |
| AGAATTAGCCCATAGAATGT+TGG | + | chr6_1:83793573-83793592 | None:intergenic | 35.0% | |
| ! | TATGGGCTAATTCTTCTTCA+AGG | - | chr6_1:83793579-83793598 | Msa0895650:intron | 35.0% |
| ! | ATATGTGTGATACCCCTTTT+TGG | - | chr6_1:83793844-83793863 | Msa0895650:intron | 35.0% |
| ATTGTACGTGCACTTTGTAA+CGG | + | chr6_1:83794135-83794154 | None:intergenic | 35.0% | |
| AAAGTGCACGTACAATTGAA+GGG | - | chr6_1:83794139-83794158 | Msa0895650:intron | 35.0% | |
| TTACCTAATGGGACAAAAGA+GGG | - | chr6_1:83794256-83794275 | Msa0895650:intron | 35.0% | |
| ! | ACAAAAGAGGGTAGGATTTT+AGG | - | chr6_1:83794268-83794287 | Msa0895650:intron | 35.0% |
| TGATTCGAACTTATCTCTTG+AGG | - | chr6_1:83794604-83794623 | Msa0895650:intron | 35.0% | |
| GCACAAATACTTCTTGGATT+AGG | + | chr6_1:83794831-83794850 | None:intergenic | 35.0% | |
| CATGAAGCACAAATACTTCT+TGG | + | chr6_1:83794837-83794856 | None:intergenic | 35.0% | |
| ! | AAAACATGTGTCTTGGTCTT+TGG | - | chr6_1:83794884-83794903 | Msa0895650:intron | 35.0% |
| ! | AAACATGTGTCTTGGTCTTT+GGG | - | chr6_1:83794885-83794904 | Msa0895650:intron | 35.0% |
| !! | TGGTCTTTGGGATTACAATA+TGG | - | chr6_1:83794897-83794916 | Msa0895650:intron | 35.0% |
| ACACAGATTCACACCTTTAT+AGG | - | chr6_1:83795018-83795037 | Msa0895650:intron | 35.0% | |
| AGGATTTAGGGAACCTATAA+AGG | + | chr6_1:83795034-83795053 | None:intergenic | 35.0% | |
| CACACACTAGCTAGTAATAA+AGG | + | chr6_1:83795218-83795237 | None:intergenic | 35.0% | |
| CAAGTCAAATCCAATACAAC+TGG | + | chr6_1:83795788-83795807 | None:intergenic | 35.0% | |
| ! | TATTTGTTTGTAGGTTGGGT+AGG | + | chr6_1:83796508-83796527 | None:intergenic | 35.0% |
| ATAAAGAACTGGATAACGAC+AGG | - | chr6_1:83796615-83796634 | Msa0895650:intron | 35.0% | |
| ! | AAAAAAAAACGGAAGCACAC+GGG | - | chr6_1:83797022-83797041 | Msa0895650:intron | 35.0% |
| ! | AATCATGGATTGTATACGAC+TGG | - | chr6_1:83797093-83797112 | Msa0895650:intron | 35.0% |
| GATTACGCAAACAAAGAGTT+GGG | - | chr6_1:83797154-83797173 | Msa0895650:intron | 35.0% | |
| GTTTGATGTACCAATAGGAT+AGG | + | chr6_1:83797366-83797385 | None:intergenic | 35.0% | |
| ! | CTGTTGTTTGATGTACCAAT+AGG | + | chr6_1:83797371-83797390 | None:intergenic | 35.0% |
| ! | ATTTTACTGTATTCACGCAG+TGG | + | chr6_1:83797677-83797696 | None:intergenic | 35.0% |
| ATATTGATCATAGGGAAACG+TGG | - | chr6_1:83797695-83797714 | Msa0895650:intron | 35.0% | |
| ACGTGGTCCATTAATAATAC+AGG | - | chr6_1:83797712-83797731 | Msa0895650:intron | 35.0% | |
| CTACAAATTTCATCTCCTCT+AGG | - | chr6_1:83797806-83797825 | Msa0895650:intron | 35.0% | |
| ! | AATTTCATCTCCTCTAGGAA+TGG | - | chr6_1:83797811-83797830 | Msa0895650:intron | 35.0% |
| TGGTTAACAACAATTGAGAG+AGG | + | chr6_1:83797917-83797936 | None:intergenic | 35.0% | |
| ATCTCTTTGTTCAGTTTAGG+TGG | + | chr6_1:83797937-83797956 | None:intergenic | 35.0% | |
| CAAAGAGATCATATAGGCTA+AGG | - | chr6_1:83797948-83797967 | Msa0895650:intron | 35.0% | |
| ! | TTTTATCCGCATATATCCAC+GGG | + | chr6_1:83797992-83798011 | None:intergenic | 35.0% |
| ATGTATCCATCACATGTTTG+TGG | + | chr6_1:83798019-83798038 | None:intergenic | 35.0% | |
| TAACATCCCAAACTGCTTTA+AGG | - | chr6_1:83798194-83798213 | Msa0895650:intron | 35.0% | |
| GACAATCCTTAAAGCAGTTT+GGG | + | chr6_1:83798203-83798222 | None:intergenic | 35.0% | |
| !! | AAAGACTTGTGTTGGTTTGT+GGG | + | chr6_1:83798233-83798252 | None:intergenic | 35.0% |
| !! | AAAAGACTTGTGTTGGTTTG+TGG | + | chr6_1:83798234-83798253 | None:intergenic | 35.0% |
| !!! | ACTTGGAGAAATTTTGGGAT+GGG | + | chr6_1:83798310-83798329 | None:intergenic | 35.0% |
| !!! | GCTTGACTTGGAGAAATTTT+GGG | + | chr6_1:83798315-83798334 | None:intergenic | 35.0% |
| !!! | TGCTTGACTTGGAGAAATTT+TGG | + | chr6_1:83798316-83798335 | None:intergenic | 35.0% |
| TCTAAATATGGGAGTAGTGT+AGG | + | chr6_1:83798630-83798649 | None:intergenic | 35.0% | |
| ! | CATGGTCGTCTCTAATATTT+TGG | - | chr6_1:83798823-83798842 | Msa0895650:intron | 35.0% |
| TAAGCGAGATGAGTTCTATT+GGG | - | chr6_1:83799360-83799379 | Msa0895650:intron | 35.0% | |
| AAGTCCTACATGGACAAAAT+AGG | - | chr6_1:83799391-83799410 | Msa0895650:intron | 35.0% | |
| ! | AAGTCCTATTTTGTCCATGT+AGG | + | chr6_1:83799398-83799417 | None:intergenic | 35.0% |
| ! | CATGGACAAAATAGGACTTT+TGG | - | chr6_1:83799399-83799418 | Msa0895650:intron | 35.0% |
| ! | GTTTGAAGCGTGCATATAAA+TGG | + | chr6_1:83799536-83799555 | None:intergenic | 35.0% |
| GTGTATCGGAAAAAACCATT+AGG | - | chr6_1:83799579-83799598 | Msa0895650:intron | 35.0% | |
| TTATCTCTACCAATTGAGCT+AGG | + | chr6_1:83799718-83799737 | None:intergenic | 35.0% | |
| AATAATATATGTAGGGGCTG+AGG | - | chr6_1:83799740-83799759 | Msa0895650:intron | 35.0% | |
| AAAATGTGTGATCTTCAACC+AGG | - | chr6_1:83799796-83799815 | Msa0895650:CDS | 35.0% | |
| !!! | TTTGTTTTTGCCAAGTAACC+TGG | + | chr6_1:83799817-83799836 | None:intergenic | 35.0% |
| ! | TGTGTGAGTCCTAATTTTCA+AGG | + | chr6_1:83800016-83800035 | None:intergenic | 35.0% |
| CACACACCCTAAATATGATT+AGG | - | chr6_1:83800030-83800049 | Msa0895650:intron | 35.0% | |
| GGCAACCCTAATCATATTTA+GGG | + | chr6_1:83800039-83800058 | None:intergenic | 35.0% | |
| TGGCAACCCTAATCATATTT+AGG | + | chr6_1:83800040-83800059 | None:intergenic | 35.0% | |
| AAAATGGTAGGGTTCATCTT+TGG | - | chr6_1:83800501-83800520 | Msa0895650:intron | 35.0% | |
| AATAAGGGGTTGTCAAACAT+GGG | + | chr6_1:83800533-83800552 | None:intergenic | 35.0% | |
| AAATAAGGGGTTGTCAAACA+TGG | + | chr6_1:83800534-83800553 | None:intergenic | 35.0% | |
| !! | AGAATGAGTTTGTTATCCTC+TGG | + | chr6_1:83800652-83800671 | None:intergenic | 35.0% |
| CTAACAAATTCATACTGCAG+GGG | - | chr6_1:83800689-83800708 | Msa0895650:intron | 35.0% | |
| !!! | TATTTTTTTTGGGGTAGCCA+AGG | + | chr6_1:83800741-83800760 | None:intergenic | 35.0% |
| ! | TGTTTATTATTTGGGGTAGC+CGG | + | chr6_1:83800796-83800815 | None:intergenic | 35.0% |
| CAGGCAGTTATTGATGAAAT+TGG | - | chr6_1:83801062-83801081 | Msa0895650:intron | 35.0% | |
| CTCGCAAAAAATTTATGCAG+AGG | + | chr6_1:83801356-83801375 | None:intergenic | 35.0% | |
| CATACAAGGAAAATAGTAGG+CGG | + | chr6_1:83801427-83801446 | None:intergenic | 35.0% | |
| ACGTGGGAATTCAATTCAAT+TGG | + | chr6_1:83801713-83801732 | None:intergenic | 35.0% | |
| AGTCATAAGTTCAAGGAAAG+TGG | - | chr6_1:83801765-83801784 | Msa0895650:intron | 35.0% | |
| TGTTCCCTGATATTAATGAC+TGG | - | chr6_1:83801921-83801940 | Msa0895650:CDS | 35.0% | |
| ACTGCCAGTCATTAATATCA+GGG | + | chr6_1:83801928-83801947 | None:intergenic | 35.0% | |
| TACTGCCAGTCATTAATATC+AGG | + | chr6_1:83801929-83801948 | None:intergenic | 35.0% | |
| !! | GGAAATCATTTTGAGGAACT+TGG | - | chr6_1:83801975-83801994 | Msa0895650:CDS | 35.0% |
| !!! | ACAGTCTATGTTTTGATCCT+TGG | + | chr6_1:83802779-83802798 | None:intergenic | 35.0% |
| TTTAGCCGAAGATTATTAGG+TGG | - | chr6_1:83803030-83803049 | Msa0895650:five_prime_UTR | 35.0% | |
| AGACATCCTTCAAAGACTCA+TGG | + | chr6_1:83790364-83790383 | None:intergenic | 40.0% | |
| AGATCAGGAATCTGATTCTG+TGG | + | chr6_1:83790809-83790828 | None:intergenic | 40.0% | |
| !! | TTTCTGAAGCTGAGAGTGTT+TGG | - | chr6_1:83791056-83791075 | Msa0895650:intron | 40.0% |
| ACAACATCAACAACAGCAGA+AGG | - | chr6_1:83791291-83791310 | Msa0895650:intron | 40.0% | |
| CTCTTTATGTGTGACTGAAG+TGG | - | chr6_1:83791987-83792006 | Msa0895650:intron | 40.0% | |
| ! | GATGCTTCTTTTTCCTCTAG+GGG | + | chr6_1:83792262-83792281 | None:intergenic | 40.0% |
| ! | CAGATGCTTCTTTTTCCTCT+AGG | + | chr6_1:83792264-83792283 | None:intergenic | 40.0% |
| CATCTGCAGAAACCAATAGA+AGG | + | chr6_1:83792767-83792786 | None:intergenic | 40.0% | |
| ATTATACCTGAAGAAGCTGC+TGG | + | chr6_1:83792817-83792836 | None:intergenic | 40.0% | |
| TTTGTGAGAGGAATCTTCAC+AGG | + | chr6_1:83792935-83792954 | None:intergenic | 40.0% | |
| !! | GGGTCATAAAGTTTTGTGAG+AGG | + | chr6_1:83792947-83792966 | None:intergenic | 40.0% |
| CAATCTCTAGCAGAATGAGT+TGG | - | chr6_1:83793216-83793235 | Msa0895650:intron | 40.0% | |
| GCTACACTTCCAACATTCTA+TGG | - | chr6_1:83793561-83793580 | Msa0895650:intron | 40.0% | |
| !! | AAAGGGGTATCACACATATG+AGG | + | chr6_1:83793843-83793862 | None:intergenic | 40.0% |
| CAAAGTGCACGTACAATTGA+AGG | - | chr6_1:83794138-83794157 | Msa0895650:intron | 40.0% | |
| CTTACCTAATGGGACAAAAG+AGG | - | chr6_1:83794255-83794274 | Msa0895650:intron | 40.0% | |
| !!! | GCATGAAGGTGTTTTGTGTT+TGG | + | chr6_1:83794554-83794573 | None:intergenic | 40.0% |
| ! | TTCTCTATGAGGTGTCTGTA+TGG | + | chr6_1:83794653-83794672 | None:intergenic | 40.0% |
| AACACATTCTCACCCAATGT+TGG | + | chr6_1:83795510-83795529 | None:intergenic | 40.0% | |
| CTAGTCCAAAGACCATAGTT+AGG | + | chr6_1:83795850-83795869 | None:intergenic | 40.0% | |
| CTAACTATGGTCTTTGGACT+AGG | - | chr6_1:83795848-83795867 | Msa0895650:intron | 40.0% | |
| ATTCTATCATGTGCGCCAAA+CGG | + | chr6_1:83796581-83796600 | None:intergenic | 40.0% | |
| GGATTACGCAAACAAAGAGT+TGG | - | chr6_1:83797153-83797172 | Msa0895650:intron | 40.0% | |
| !! | TAGAAAGCGCTTGATAGGAT+AGG | - | chr6_1:83797316-83797335 | Msa0895650:intron | 40.0% |
| ! | TCTATCTTTGAGGGCATGTT+TGG | + | chr6_1:83797450-83797469 | None:intergenic | 40.0% |
| TTTGGGCAATTTGGTCACTT+AGG | + | chr6_1:83797859-83797878 | None:intergenic | 40.0% | |
| TGACACTTGTTTGGGCAATT+TGG | + | chr6_1:83797868-83797887 | None:intergenic | 40.0% | |
| ATTGAGAGAGGTAAAAAGGG+AGG | + | chr6_1:83797905-83797924 | None:intergenic | 40.0% | |
| AATTCGCCACAAACATGTGA+TGG | - | chr6_1:83798010-83798029 | Msa0895650:intron | 40.0% | |
| ! | TAAATGGATATGCATTGGCG+CGG | + | chr6_1:83798152-83798171 | None:intergenic | 40.0% |
| CGACAATCCTTAAAGCAGTT+TGG | + | chr6_1:83798204-83798223 | None:intergenic | 40.0% | |
| !! | AAGACTTGTGTTGGTTTGTG+GGG | + | chr6_1:83798232-83798251 | None:intergenic | 40.0% |
| ! | ACCAACACAAGTCTTTTCAG+CGG | - | chr6_1:83798237-83798256 | Msa0895650:intron | 40.0% |
| !! | GACTTGGAGAAATTTTGGGA+TGG | + | chr6_1:83798311-83798330 | None:intergenic | 40.0% |
| GCTTAACTGTGAAGTTCTTG+TGG | - | chr6_1:83798337-83798356 | Msa0895650:intron | 40.0% | |
| ! | GTTTTGCCAAGAAACATGCT+AGG | - | chr6_1:83798489-83798508 | Msa0895650:intron | 40.0% |
| ACAGAAAATGGTAGGAGACT+AGG | - | chr6_1:83798747-83798766 | Msa0895650:intron | 40.0% | |
| ! | ATAGAAGGCACATTCATGGA+TGG | + | chr6_1:83799207-83799226 | None:intergenic | 40.0% |
| CTAAGCGAGATGAGTTCTAT+TGG | - | chr6_1:83799359-83799378 | Msa0895650:intron | 40.0% | |
| AAAACCGTCTTGTAAGGTGA+GGG | + | chr6_1:83799446-83799465 | None:intergenic | 40.0% | |
| GCTTACAAAACCGTCTTGTA+AGG | + | chr6_1:83799452-83799471 | None:intergenic | 40.0% | |
| !! | ACAAGACGGTTTTGTAAGCT+TGG | - | chr6_1:83799453-83799472 | Msa0895650:intron | 40.0% |
| !! | CAAGACGGTTTTGTAAGCTT+GGG | - | chr6_1:83799454-83799473 | Msa0895650:intron | 40.0% |
| GAAGCGTGCATATAAATGGT+GGG | + | chr6_1:83799532-83799551 | None:intergenic | 40.0% | |
| TGAAGCGTGCATATAAATGG+TGG | + | chr6_1:83799533-83799552 | None:intergenic | 40.0% | |
| CCTTCACTTCCAACGTTATT+GGG | + | chr6_1:83799558-83799577 | None:intergenic | 40.0% | |
| CCAATAACGTTGGAAGTGAA+GGG | - | chr6_1:83799556-83799575 | Msa0895650:intron | 40.0% | |
| CAATAACGTTGGAAGTGAAG+GGG | - | chr6_1:83799557-83799576 | Msa0895650:intron | 40.0% | |
| ACCAATTGAGCTAGGTTCAA+GGG | + | chr6_1:83799710-83799729 | None:intergenic | 40.0% | |
| TACCAATTGAGCTAGGTTCA+AGG | + | chr6_1:83799711-83799730 | None:intergenic | 40.0% | |
| TGATCTTCAACCAGGTTACT+TGG | - | chr6_1:83799804-83799823 | Msa0895650:CDS | 40.0% | |
| ATTTGATAGGGTGAGAGAAG+TGG | - | chr6_1:83799918-83799937 | Msa0895650:intron | 40.0% | |
| TTTGATAGGGTGAGAGAAGT+GGG | - | chr6_1:83799919-83799938 | Msa0895650:intron | 40.0% | |
| CACACACACTAAGTATAGAG+AGG | + | chr6_1:83800235-83800254 | None:intergenic | 40.0% | |
| TGATGCTCTCTCTCTACATA+TGG | - | chr6_1:83801466-83801485 | Msa0895650:intron | 40.0% | |
| GATGCTCTCTCTCTACATAT+GGG | - | chr6_1:83801467-83801486 | Msa0895650:intron | 40.0% | |
| CATCAGCAGTCATAAGTTCA+AGG | - | chr6_1:83801758-83801777 | Msa0895650:intron | 40.0% | |
| ! | AGTAATGGAACATGGACACA+AGG | - | chr6_1:83801945-83801964 | Msa0895650:CDS | 40.0% |
| ATCCTATCAACTCACCACAT+TGG | - | chr6_1:83802008-83802027 | Msa0895650:CDS | 40.0% | |
| !! | TTCCAATGTGGTGAGTTGAT+AGG | + | chr6_1:83802013-83802032 | None:intergenic | 40.0% |
| AGGATTAGGGTTTATACCTG+AGG | + | chr6_1:83802041-83802060 | None:intergenic | 40.0% | |
| ! | ACGGTTGTATCCTTTGACTT+TGG | - | chr6_1:83802578-83802597 | Msa0895650:exon | 40.0% |
| ACACAAATGCTTACTTGTGC+AGG | - | chr6_1:83802726-83802745 | Msa0895650:intron | 40.0% | |
| CACAAATGCTTACTTGTGCA+GGG | - | chr6_1:83802727-83802746 | Msa0895650:intron | 40.0% | |
| AGACTGTTCGAATCCAAACT+TGG | - | chr6_1:83802792-83802811 | Msa0895650:intron | 40.0% | |
| CAAACTTGGAGTTCACCTTA+GGG | - | chr6_1:83802806-83802825 | Msa0895650:intron | 40.0% | |
| TACAAGGTTTCTTGGATGTG+TGG | + | chr6_1:83803001-83803020 | None:intergenic | 40.0% | |
| CTCTCTCCATGAGTCTTTGA+AGG | - | chr6_1:83790355-83790374 | Msa0895650:three_prime_UTR | 45.0% | |
| CAGCAGAAGGTGAATCAGTT+TGG | - | chr6_1:83791304-83791323 | Msa0895650:intron | 45.0% | |
| GAACTAGTCCATCGCATTCT+CGG | + | chr6_1:83791412-83791431 | None:intergenic | 45.0% | |
| CATTCAATCACTGCATGCCT+TGG | + | chr6_1:83792053-83792072 | None:intergenic | 45.0% | |
| AAAACCTCACGATGACACTC+TGG | - | chr6_1:83792566-83792585 | Msa0895650:intron | 45.0% | |
| ! | CTACCCTCTTTTGTCCCATT+AGG | + | chr6_1:83794262-83794281 | None:intergenic | 45.0% |
| CTAATGGGACAAAAGAGGGT+AGG | - | chr6_1:83794260-83794279 | Msa0895650:intron | 45.0% | |
| ! | TGAGGTGTCTGTATGGTGAT+AGG | + | chr6_1:83794646-83794665 | None:intergenic | 45.0% |
| ATGAAGCATGTGTACGGACA+CGG | - | chr6_1:83794702-83794721 | Msa0895650:intron | 45.0% | |
| TCCTTGCAAGTCAGAAAGAC+AGG | - | chr6_1:83795157-83795176 | Msa0895650:intron | 45.0% | |
| ! | ACCTGTCTTTCTGACTTGCA+AGG | + | chr6_1:83795161-83795180 | None:intergenic | 45.0% |
| ! | GTGCAGAAGAAAGTGTGTAC+TGG | + | chr6_1:83796452-83796471 | None:intergenic | 45.0% |
| TTCTATCATGTGCGCCAAAC+GGG | + | chr6_1:83796580-83796599 | None:intergenic | 45.0% | |
| GTGTGCACCAAACACATGAT+AGG | + | chr6_1:83796722-83796741 | None:intergenic | 45.0% | |
| ! | GAAGAATGGAAGCACACACA+TGG | - | chr6_1:83797196-83797215 | Msa0895650:intron | 45.0% |
| !! | GGGAATAGAAAGCGCTTGAT+AGG | - | chr6_1:83797311-83797330 | Msa0895650:intron | 45.0% |
| ! | ATCTCCTCTAGGAATGGCAT+TGG | - | chr6_1:83797817-83797836 | Msa0895650:intron | 45.0% |
| ! | TCTCCTCTAGGAATGGCATT+GGG | - | chr6_1:83797818-83797837 | Msa0895650:intron | 45.0% |
| GCAATTTGGTCACTTAGGAG+TGG | + | chr6_1:83797854-83797873 | None:intergenic | 45.0% | |
| ! | CCAACACAAGTCTTTTCAGC+GGG | - | chr6_1:83798238-83798257 | Msa0895650:intron | 45.0% |
| TTACCGGGAAACTTCTCAGT+AGG | - | chr6_1:83798281-83798300 | Msa0895650:intron | 45.0% | |
| TGACCTACTGAGAAGTTTCC+CGG | + | chr6_1:83798287-83798306 | None:intergenic | 45.0% | |
| ACAGTTAAGCGTGCTTGACT+TGG | + | chr6_1:83798327-83798346 | None:intergenic | 45.0% | |
| TCGAAATGAGAGAGATCCTG+AGG | + | chr6_1:83798460-83798479 | None:intergenic | 45.0% | |
| ! | CCTTGGCACTCCTTTATTTG+AGG | + | chr6_1:83798598-83798617 | None:intergenic | 45.0% |
| !! | CCTCAAATAAAGGAGTGCCA+AGG | - | chr6_1:83798595-83798614 | Msa0895650:intron | 45.0% |
| !! | AATAAAGGAGTGCCAAGGTC+CGG | - | chr6_1:83798600-83798619 | Msa0895650:intron | 45.0% |
| AAACCGTCTTGTAAGGTGAG+GGG | + | chr6_1:83799445-83799464 | None:intergenic | 45.0% | |
| CAAAACCGTCTTGTAAGGTG+AGG | + | chr6_1:83799447-83799466 | None:intergenic | 45.0% | |
| CGCTTCAAACCCAATAACGT+TGG | - | chr6_1:83799546-83799565 | Msa0895650:intron | 45.0% | |
| CCCAATAACGTTGGAAGTGA+AGG | - | chr6_1:83799555-83799574 | Msa0895650:intron | 45.0% | |
| CCCTTCACTTCCAACGTTAT+TGG | + | chr6_1:83799559-83799578 | None:intergenic | 45.0% | |
| ! | TTGGAAGTGAAGGGGTGTAT+CGG | - | chr6_1:83799565-83799584 | Msa0895650:intron | 45.0% |
| CACACACGCTAGACATGATT+AGG | - | chr6_1:83799607-83799626 | Msa0895650:intron | 45.0% | |
| CCAATTGAGCTAGGTTCAAG+GGG | + | chr6_1:83799709-83799728 | None:intergenic | 45.0% | |
| TTGATAGGGTGAGAGAAGTG+GGG | - | chr6_1:83799920-83799939 | Msa0895650:intron | 45.0% | |
| CAAGGAAAATAGTAGGCGGT+TGG | + | chr6_1:83801423-83801442 | None:intergenic | 45.0% | |
| ! | TGACTGGCAGTAATGGAACA+TGG | - | chr6_1:83801937-83801956 | Msa0895650:CDS | 45.0% |
| ACATGGACACAAGGTAGTTC+TGG | - | chr6_1:83801954-83801973 | Msa0895650:CDS | 45.0% | |
| AGTACGTCAGTACATCCTCA+AGG | - | chr6_1:83802210-83802229 | Msa0895650:CDS | 45.0% | |
| TAGGAAGAATCGAGACCTTG+AGG | + | chr6_1:83802228-83802247 | None:intergenic | 45.0% | |
| CAGGACCATGTTAGAGAGAT+AGG | - | chr6_1:83802334-83802353 | Msa0895650:CDS | 45.0% | |
| CCTAAGGTGAACTCCAAGTT+TGG | + | chr6_1:83802808-83802827 | None:intergenic | 45.0% | |
| CCAAACTTGGAGTTCACCTT+AGG | - | chr6_1:83802805-83802824 | Msa0895650:intron | 45.0% | |
| !!! | AAAAATTATTTTTTTTTTGA+AGG | - | chr6_1:83790619-83790638 | Msa0895650:intron | 5.0% |
| !!! | AAAATTATTTTTTTTTTGAA+GGG | - | chr6_1:83790620-83790639 | Msa0895650:intron | 5.0% |
| !! | TATAAAAATAAATTATGAAA+TGG | - | chr6_1:83794479-83794498 | Msa0895650:intron | 5.0% |
| !! | ATTTGTAAAAAAAAAAAAAT+AGG | - | chr6_1:83796904-83796923 | Msa0895650:intron | 5.0% |
| !!! | TAAATATTTTTGTATTATTA+AGG | + | chr6_1:83799972-83799991 | None:intergenic | 5.0% |
| !!! | AATTCTTTTTTTATTAAAAA+TGG | + | chr6_1:83800430-83800449 | None:intergenic | 5.0% |
| !!! | TCAAAAATAATATTTTTTTT+GGG | + | chr6_1:83800751-83800770 | None:intergenic | 5.0% |
| !!! | TTCAAAAATAATATTTTTTT+TGG | + | chr6_1:83800752-83800771 | None:intergenic | 5.0% |
| !!! | TATATTATTATTTTTTTTGT+TGG | + | chr6_1:83802283-83802302 | None:intergenic | 5.0% |
| !!! | ATTTTTAGTAAATTTAAAAA+TGG | - | chr6_1:83802440-83802459 | Msa0895650:CDS | 5.0% |
| !!! | TTTTTAGTAAATTTAAAAAT+GGG | - | chr6_1:83802441-83802460 | Msa0895650:CDS | 5.0% |
| GAGAGAGAGTGAGAGAGATG+TGG | + | chr6_1:83790306-83790325 | None:intergenic | 50.0% | |
| ! | TCTAAGAGGCACAAGAGCCA+AGG | - | chr6_1:83792033-83792052 | Msa0895650:intron | 50.0% |
| ! | CAATCCAGAGTGTCATCGTG+AGG | + | chr6_1:83792573-83792592 | None:intergenic | 50.0% |
| CTCACGATGACACTCTGGAT+TGG | - | chr6_1:83792571-83792590 | Msa0895650:intron | 50.0% | |
| CATGTGTACGGACACGGATA+CGG | - | chr6_1:83794708-83794727 | Msa0895650:intron | 50.0% | |
| !!! | GGAGAGTGTGAGCTGGTTTT+TGG | + | chr6_1:83796480-83796499 | None:intergenic | 50.0% |
| ! | TTTGTAGGTTGGGTAGGCAG+GGG | + | chr6_1:83796502-83796521 | None:intergenic | 50.0% |
| ! | GTTTGTAGGTTGGGTAGGCA+GGG | + | chr6_1:83796503-83796522 | None:intergenic | 50.0% |
| ! | TGTTTGTAGGTTGGGTAGGC+AGG | + | chr6_1:83796504-83796523 | None:intergenic | 50.0% |
| GTACACATTCAGAGCCCGTT+TGG | - | chr6_1:83796563-83796582 | Msa0895650:intron | 50.0% | |
| ! | AAACGGAAGCACACGGGAAA+TGG | - | chr6_1:83797028-83797047 | Msa0895650:intron | 50.0% |
| ! | AACGGAAGCACACGGGAAAT+GGG | - | chr6_1:83797029-83797048 | Msa0895650:intron | 50.0% |
| !! | TGTGATTTGGTGGGAGTCGA+AGG | - | chr6_1:83797276-83797295 | Msa0895650:intron | 50.0% |
| ! | ATTTGGTGGGAGTCGAAGGA+GGG | - | chr6_1:83797280-83797299 | Msa0895650:intron | 50.0% |
| GTTCCCAATGCCATTCCTAG+AGG | + | chr6_1:83797824-83797843 | None:intergenic | 50.0% | |
| CCCGCTGAAAAGACTTGTGT+TGG | + | chr6_1:83798241-83798260 | None:intergenic | 50.0% | |
| CCAAGAAACATGCTAGGAGC+CGG | - | chr6_1:83798495-83798514 | Msa0895650:intron | 50.0% | |
| AGCGTGTGTGCAAGTCCTAA+TGG | + | chr6_1:83799597-83799616 | None:intergenic | 50.0% | |
| CCCCTTGAACCTAGCTCAAT+TGG | - | chr6_1:83799706-83799725 | Msa0895650:intron | 50.0% | |
| CCTGAGGAAGCTTTCCAATG+TGG | + | chr6_1:83802025-83802044 | None:intergenic | 50.0% | |
| CCACATTGGAAAGCTTCCTC+AGG | - | chr6_1:83802022-83802041 | Msa0895650:CDS | 50.0% | |
| GGGAGCCTATCTCTCTAACA+TGG | + | chr6_1:83802342-83802361 | None:intergenic | 50.0% | |
| GTTCACGCCGTTGAGCTTCT+CGG | - | chr6_1:83791448-83791467 | Msa0895650:intron | 55.0% | |
| GACAAGCCAGCAGCTTCTTC+AGG | - | chr6_1:83792808-83792827 | Msa0895650:intron | 55.0% | |
| ! | TTGTAGGTTGGGTAGGCAGG+GGG | + | chr6_1:83796501-83796520 | None:intergenic | 55.0% |
| !! | GATTTGGTGGGAGTCGAAGG+AGG | - | chr6_1:83797279-83797298 | Msa0895650:intron | 55.0% |
| GGTGCGCAGGATAAAGAGAC+AGG | + | chr6_1:83797429-83797448 | None:intergenic | 55.0% | |
| TCCGCATATATCCACGGGTG+CGG | + | chr6_1:83797987-83798006 | None:intergenic | 55.0% | |
| GTACGGGACTGCATGGTTGA+AGG | + | chr6_1:83798429-83798448 | None:intergenic | 55.0% | |
| CCGGCTCCTAGCATGTTTCT+TGG | + | chr6_1:83798498-83798517 | None:intergenic | 55.0% | |
| CTATGTGTAACGCCTCCGCT+TGG | + | chr6_1:83798562-83798581 | None:intergenic | 55.0% | |
| TGGGAGTAGTGTAGGCCATC+CGG | + | chr6_1:83798622-83798641 | None:intergenic | 55.0% | |
| GCACCCCTCACCTTACAAGA+CGG | - | chr6_1:83799439-83799458 | Msa0895650:intron | 55.0% | |
| ! | ATGTGGAGAAGTGGGGTGTC+CGG | + | chr6_1:83799774-83799793 | None:intergenic | 55.0% |
| ! | AGGGGCGTAGCCCTTCATAA+GGG | - | chr6_1:83800707-83800726 | Msa0895650:intron | 55.0% |
| GCGTAGCCCTTCATAAGGGA+GGG | - | chr6_1:83800711-83800730 | Msa0895650:intron | 55.0% | |
| CGTAGCCCTTCATAAGGGAG+GGG | - | chr6_1:83800712-83800731 | Msa0895650:intron | 55.0% | |
| GGCTACCCCTCCCTTATGAA+GGG | + | chr6_1:83800720-83800739 | None:intergenic | 55.0% | |
| AGGCTACCCCTCCCTTATGA+AGG | + | chr6_1:83800721-83800740 | None:intergenic | 55.0% | |
| TCATAAGGGAGGGGTAGCCT+TGG | - | chr6_1:83800721-83800740 | Msa0895650:intron | 55.0% | |
| TGAGGGCTCCGAGAATGCGA+TGG | - | chr6_1:83791401-83791420 | Msa0895650:CDS | 60.0% | |
| ATGGCCGCCGAGAAGCTCAA+CGG | + | chr6_1:83791458-83791477 | None:intergenic | 60.0% | |
| TGGGAGTCGAAGGAGGGTGA+AGG | - | chr6_1:83797286-83797305 | Msa0895650:intron | 60.0% | |
| GGGAGTCGAAGGAGGGTGAA+GGG | - | chr6_1:83797287-83797306 | Msa0895650:intron | 60.0% | |
| AGTCGAAGGAGGGTGAAGGG+TGG | - | chr6_1:83797290-83797309 | Msa0895650:intron | 60.0% | |
| GTCGAAGGAGGGTGAAGGGT+GGG | - | chr6_1:83797291-83797310 | Msa0895650:intron | 60.0% | |
| !! | TGAGGGCATGTTTGGTGCGC+AGG | + | chr6_1:83797442-83797461 | None:intergenic | 60.0% |
| GACAAAAGAACCCGCACCCG+TGG | - | chr6_1:83797973-83797992 | Msa0895650:intron | 60.0% | |
| CCGCATATATCCACGGGTGC+GGG | + | chr6_1:83797986-83798005 | None:intergenic | 60.0% | |
| CCCGCACCCGTGGATATATG+CGG | - | chr6_1:83797983-83798002 | Msa0895650:intron | 60.0% | |
| GTCCTCACTCGCACGCTTAC+CGG | - | chr6_1:83798265-83798284 | Msa0895650:intron | 60.0% | |
| TCCTCACTCGCACGCTTACC+GGG | - | chr6_1:83798266-83798285 | Msa0895650:intron | 60.0% | |
| CATGCAGTCCCGTACCTGCA+CGG | - | chr6_1:83798434-83798453 | Msa0895650:intron | 60.0% | |
| ATCCTGAGGCCGTGCAGGTA+CGG | + | chr6_1:83798446-83798465 | None:intergenic | 60.0% | |
| GTAACGCCCGAGGCTGATGA+GGG | + | chr6_1:83798532-83798551 | None:intergenic | 60.0% | |
| TGTAACGCCCGAGGCTGATG+AGG | + | chr6_1:83798533-83798552 | None:intergenic | 60.0% | |
| GGCGTTACATGCCCACCAAG+CGG | - | chr6_1:83798544-83798563 | Msa0895650:intron | 60.0% | |
| GTTACATGCCCACCAAGCGG+AGG | - | chr6_1:83798547-83798566 | Msa0895650:intron | 60.0% | |
| GTGTAACGCCTCCGCTTGGT+GGG | + | chr6_1:83798558-83798577 | None:intergenic | 60.0% | |
| TGTGTAACGCCTCCGCTTGG+TGG | + | chr6_1:83798559-83798578 | None:intergenic | 60.0% | |
| !! | AAGGAGTGCCAAGGTCCGGA+TGG | - | chr6_1:83798604-83798623 | Msa0895650:intron | 60.0% |
| AGTGTAGGCCATCCGGACCT+TGG | + | chr6_1:83798615-83798634 | None:intergenic | 60.0% | |
| AGGGGCTGAGGTTCGAACTC+CGG | - | chr6_1:83799752-83799771 | Msa0895650:intron | 60.0% | |
| ! | CAGGGGCGTAGCCCTTCATA+AGG | - | chr6_1:83800706-83800725 | Msa0895650:intron | 60.0% |
| GGCGTAGCCCTTCATAAGGG+AGG | - | chr6_1:83800710-83800729 | Msa0895650:intron | 60.0% | |
| CACGCCGTTGAGCTTCTCGG+CGG | - | chr6_1:83791451-83791470 | Msa0895650:intron | 65.0% | |
| TCCCGGTAAGCGTGCGAGTG+AGG | + | chr6_1:83798270-83798289 | None:intergenic | 65.0% | |
| CGTGCAGGTACGGGACTGCA+TGG | + | chr6_1:83798436-83798455 | None:intergenic | 65.0% | |
| TCCTGAGGCCGTGCAGGTAC+GGG | + | chr6_1:83798445-83798464 | None:intergenic | 65.0% | |
| GAGAGATCCTGAGGCCGTGC+AGG | + | chr6_1:83798451-83798470 | None:intergenic | 65.0% | |
| ! | TGGTGGGCATGTAACGCCCG+AGG | + | chr6_1:83798542-83798561 | None:intergenic | 65.0% |
| ! | GGCAGGGGGAGAGTGTGAGC+TGG | + | chr6_1:83796487-83796506 | None:intergenic | 70.0% |
| TCCCGTACCTGCACGGCCTC+AGG | - | chr6_1:83798441-83798460 | Msa0895650:intron | 70.0% | |
| GATGAGGGCGGGGAGTGGTC+CGG | + | chr6_1:83798517-83798536 | None:intergenic | 70.0% | |
| AGGCTGATGAGGGCGGGGAG+TGG | + | chr6_1:83798522-83798541 | None:intergenic | 70.0% | |
| CTCCCCGCCCTCATCAGCCT+CGG | - | chr6_1:83798522-83798541 | Msa0895650:intron | 70.0% | |
| TCCCCGCCCTCATCAGCCTC+GGG | - | chr6_1:83798523-83798542 | Msa0895650:intron | 70.0% | |
| ACGCCCGAGGCTGATGAGGG+CGG | + | chr6_1:83798529-83798548 | None:intergenic | 70.0% | |
| GCCCGAGGCTGATGAGGGCG+GGG | + | chr6_1:83798527-83798546 | None:intergenic | 75.0% | |
| CGCCCGAGGCTGATGAGGGC+GGG | + | chr6_1:83798528-83798547 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 83790263 | 83803122 | 83790263 | ID=Msa0895650;Name=Msa0895650 |
| chr6_1 | mRNA | 83790263 | 83803122 | 83790263 | ID=Msa0895650-mRNA-1;Parent=Msa0895650;Name=Msa0895650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=185|1|1|1|0.71|0.5|8|255|368 |
| chr6_1 | exon | 83790263 | 83790479 | 83790263 | ID=Msa0895650-mRNA-1:exon:14159;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83790513 | 83790637 | 83790513 | ID=Msa0895650-mRNA-1:exon:14158;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83791342 | 83791438 | 83791342 | ID=Msa0895650-mRNA-1:exon:14157;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83799785 | 83799905 | 83799785 | ID=Msa0895650-mRNA-1:exon:14156;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83800556 | 83800601 | 83800556 | ID=Msa0895650-mRNA-1:exon:14155;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83801474 | 83801550 | 83801474 | ID=Msa0895650-mRNA-1:exon:14154;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83801904 | 83802622 | 83801904 | ID=Msa0895650-mRNA-1:exon:14153;Parent=Msa0895650-mRNA-1 |
| chr6_1 | exon | 83802978 | 83803122 | 83802978 | ID=Msa0895650-mRNA-1:exon:14152;Parent=Msa0895650-mRNA-1 |
| chr6_1 | five_prime_UTR | 83802978 | 83803122 | 83802978 | ID=Msa0895650-mRNA-1:five_prime_utr;Parent=Msa0895650-mRNA-1 |
| chr6_1 | five_prime_UTR | 83802583 | 83802622 | 83802583 | ID=Msa0895650-mRNA-1:five_prime_utr;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83801904 | 83802582 | 83801904 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83801474 | 83801550 | 83801474 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83800556 | 83800601 | 83800556 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83799785 | 83799905 | 83799785 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83791342 | 83791438 | 83791342 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | CDS | 83790551 | 83790637 | 83790551 | ID=Msa0895650-mRNA-1:cds;Parent=Msa0895650-mRNA-1 |
| chr6_1 | three_prime_UTR | 83790513 | 83790550 | 83790513 | ID=Msa0895650-mRNA-1:three_prime_utr;Parent=Msa0895650-mRNA-1 |
| chr6_1 | three_prime_UTR | 83790263 | 83790479 | 83790263 | ID=Msa0895650-mRNA-1:three_prime_utr;Parent=Msa0895650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
