AlfalfaGEDB | Msa1338610

M. sativa cultivar zhongmu-4 / Msa1338610

KEGG: -
GO: -
PFAM: PF04720.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1338610	XP_013449816.1	97.199	357	9	1	1	357	1	356	0.0	710

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1338610	A0A072U2B1	97.199	357	9	1	1	357	1	356	0.0	710

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000940	Msa1338610	0.806678	7.320268e-50	-8.615850e-47
Msa0008840	Msa1338610	0.801034	1.088999e-48	-8.615850e-47
Msa0036370	Msa1338610	0.842700	2.203067e-58	-8.615850e-47
Msa0072170	Msa1338610	0.829784	4.239868e-55	-8.615850e-47
Msa0120540	Msa1338610	0.822632	2.135238e-53	-8.615850e-47
Msa0607510	Msa1338610	0.812287	4.574524e-51	-8.615850e-47
Msa0609000	Msa1338610	0.803751	3.001328e-49	-8.615850e-47
Msa0609220	Msa1338610	0.833520	5.087760e-56	-8.615850e-47
Msa0609970	Msa1338610	0.866899	2.033713e-65	-8.615850e-47
Msa0614990	Msa1338610	0.846130	2.634248e-59	-8.615850e-47
Msa0618200	Msa1338610	-0.812510	4.089315e-51	-8.615850e-47
Msa0625790	Msa1338610	0.814053	1.874309e-51	-8.615850e-47
Msa0650620	Msa1338610	0.856960	2.259487e-62	-8.615850e-47
Msa0659140	Msa1338610	0.808655	2.784273e-50	-8.615850e-47
Msa0669190	Msa1338610	0.806404	8.364036e-50	-8.615850e-47
Msa0669720	Msa1338610	0.801527	8.631705e-49	-8.615850e-47
Msa0692110	Msa1338610	0.823070	1.687950e-53	-8.615850e-47
Msa0705600	Msa1338610	0.810177	1.312260e-50	-8.615850e-47
Msa0712310	Msa1338610	0.821259	4.440118e-53	-8.615850e-47
Msa0795010	Msa1338610	0.819109	1.380371e-52	-8.615850e-47
Msa0795030	Msa1338610	0.827697	1.355939e-54	-8.615850e-47
Msa0814250	Msa1338610	0.803317	3.693035e-49	-8.615850e-47
Msa0830990	Msa1338610	0.824180	9.283330e-54	-8.615850e-47
Msa0127040	Msa1338610	0.813752	2.183690e-51	-8.615850e-47
Msa0138160	Msa1338610	0.816275	6.012981e-52	-8.615850e-47
Msa0140520	Msa1338610	-0.815753	7.866554e-52	-8.615850e-47
Msa0145150	Msa1338610	0.810563	1.083416e-50	-8.615850e-47
Msa0178990	Msa1338610	0.804607	1.992180e-49	-8.615850e-47
Msa0183460	Msa1338610	0.812445	4.223652e-51	-8.615850e-47
Msa0236270	Msa1338610	0.802573	5.262976e-49	-8.615850e-47
Msa1253810	Msa1338610	0.829860	4.063170e-55	-8.615850e-47
Msa1259400	Msa1338610	0.810303	1.232561e-50	-8.615850e-47
Msa1335560	Msa1338610	0.810338	1.211149e-50	-8.615850e-47
Msa1338610	Msa1350690	0.841143	5.680929e-58	-8.615850e-47
Msa1338610	Msa1360280	0.824551	7.590450e-54	-8.615850e-47
Msa1338610	Msa1373800	0.975472	5.138325e-140	-8.615850e-47
Msa1338610	Msa1373880	0.801927	7.146525e-49	-8.615850e-47
Msa1338610	Msa1381650	0.839161	1.869672e-57	-8.615850e-47
Msa1338610	Msa1452470	0.826529	2.581042e-54	-8.615850e-47
Msa1338610	Msa1465960	0.806542	7.821762e-50	-8.615850e-47
Msa0387910	Msa1338610	0.836005	1.205683e-56	-8.615850e-47
Msa0419640	Msa1338610	-0.802590	5.219095e-49	-8.615850e-47
Msa0421260	Msa1338610	0.828297	9.722705e-55	-8.615850e-47
Msa0449820	Msa1338610	0.805013	1.638142e-49	-8.615850e-47
Msa0467220	Msa1338610	0.811108	8.256141e-51	-8.615850e-47
Msa0998700	Msa1338610	0.838064	3.590317e-57	-8.615850e-47
Msa1036270	Msa1338610	0.971500	2.920905e-133	-8.615850e-47
Msa1073400	Msa1338610	0.806046	9.947574e-50	-8.615850e-47
Msa1076540	Msa1338610	0.966962	1.258588e-126	-8.615850e-47
Msa1088290	Msa1338610	0.814740	1.320719e-51	-8.615850e-47
Msa1094430	Msa1338610	0.828935	6.816618e-55	-8.615850e-47
Msa1098720	Msa1338610	-0.808905	2.461212e-50	-8.615850e-47
Msa0241740	Msa1338610	0.809682	1.676910e-50	-8.615850e-47
Msa0266210	Msa1338610	0.842653	2.267880e-58	-8.615850e-47
Msa0284820	Msa1338610	0.823794	1.143042e-53	-8.615850e-47
Msa0287670	Msa1338610	0.842650	2.272035e-58	-8.615850e-47
Msa0347610	Msa1338610	0.800687	1.282134e-48	-8.615850e-47
Msa1113880	Msa1338610	0.816610	5.059375e-52	-8.615850e-47
Msa1126120	Msa1338610	-0.813791	2.140877e-51	-8.615850e-47
Msa1133630	Msa1338610	0.804201	2.420621e-49	-8.615850e-47
Msa1136790	Msa1338610	0.811152	8.076454e-51	-8.615850e-47
Msa1144970	Msa1338610	0.809542	1.796988e-50	-8.615850e-47
Msa1200320	Msa1338610	0.807503	4.895812e-50	-8.615850e-47
Msa1211000	Msa1338610	0.811039	8.546516e-51	-8.615850e-47
Msa1223810	Msa1338610	-0.802576	5.253543e-49	-8.615850e-47
Msa0493920	Msa1338610	0.802882	4.542931e-49	-8.615850e-47
Msa0534410	Msa1338610	0.804202	2.418907e-49	-8.615850e-47
Msa0579370	Msa1338610	0.839524	1.505456e-57	-8.615850e-47
Msa0590650	Msa1338610	0.817562	3.092605e-52	-8.615850e-47
Msa0602370	Msa1338610	0.807884	4.064673e-50	-8.615850e-47
Msa0898880	Msa1338610	0.816114	6.535626e-52	-8.615850e-47
Msa0905380	Msa1338610	0.801862	7.370718e-49	-8.615850e-47
Msa0921870	Msa1338610	0.809194	2.134167e-50	-8.615850e-47
Msa0928010	Msa1338610	0.855990	4.354263e-62	-8.615850e-47
Msa0928030	Msa1338610	0.803088	4.118686e-49	-8.615850e-47
Msa0945100	Msa1338610	0.806095	9.715396e-50	-8.615850e-47
Msa0957450	Msa1338610	-0.806903	6.562636e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1338610	MtrunA17_Chr7g0260551	97.199	357	9	1	1	357	1	356	0.0	710
Msa1338610	MtrunA17_Chr1g0184881	61.351	370	108	9	1	356	1	349	9.87e-146	416
Msa1338610	MtrunA17_Chr1g0188091	49.347	383	152	13	5	350	4	381	2.18e-99	299
Msa1338610	MtrunA17_Chr1g0166241	45.358	377	159	11	5	357	4	357	5.67e-95	287
Msa1338610	MtrunA17_Chr7g0251511	45.865	133	66	3	159	285	129	261	1.93e-34	129
Msa1338610	MtrunA17_Chr2g0289701	36.771	223	125	5	73	285	43	259	3.48e-34	128
Msa1338610	MtrunA17_Chr8g0384101	47.934	121	51	2	166	279	93	208	3.82e-33	124
Msa1338610	MtrunA17_Chr4g0075591	44.000	125	70	0	161	285	119	243	3.82e-32	122
Msa1338610	MtrunA17_Chr4g0075611	44.000	125	70	0	161	285	137	261	5.42e-32	122
Msa1338610	MtrunA17_Chr4g0040171	38.514	148	80	2	152	288	107	254	1.32e-30	118
Msa1338610	MtrunA17_Chr8g0339051	40.909	132	71	1	164	288	135	266	3.23e-28	112
Msa1338610	MtrunA17_Chr2g0282301	39.516	124	69	1	168	285	151	274	5.62e-27	108
Msa1338610	MtrunA17_Chr4g0047231	33.939	165	94	3	136	285	116	280	1.13e-26	108
Msa1338610	MtrunA17_Chr4g0047221	37.903	124	71	1	168	285	210	333	2.46e-26	108
Msa1338610	MtrunA17_Chr7g0234691	30.222	225	139	5	71	288	92	305	6.95e-25	103
Msa1338610	MtrunA17_Chr2g0282311	34.921	126	76	1	164	283	147	272	3.51e-23	98.2
Msa1338610	MtrunA17_Chr5g0396281	32.031	128	79	2	161	280	98	225	3.60e-20	88.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1338610	AT3G22970.1	50.384	391	139	12	1	357	1	370	7.80e-110	325
Msa1338610	AT2G38820.2	54.915	295	110	9	1	284	1	283	4.04e-101	301
Msa1338610	AT4G14620.1	46.400	375	142	13	5	356	2	340	2.18e-93	282
Msa1338610	AT3G22970.2	50.391	256	88	5	123	357	22	259	2.34e-72	226
Msa1338610	AT3G54550.1	47.423	291	125	10	1	283	1	271	4.76e-72	226
Msa1338610	AT2G38820.1	50.000	202	78	9	1	191	1	190	3.72e-47	159
Msa1338610	AT3G25240.1	36.327	245	130	8	50	283	16	245	1.09e-34	129
Msa1338610	AT2G39650.2	39.024	164	85	4	159	307	46	209	2.09e-33	124
Msa1338610	AT2G39650.1	40.816	147	73	3	159	291	108	254	4.06e-33	125
Msa1338610	AT3G07350.1	45.312	128	64	1	164	285	139	266	2.45e-32	123
Msa1338610	AT4G32480.1	37.952	166	80	3	136	283	85	245	1.15e-28	113
Msa1338610	AT1G62420.1	43.802	121	65	1	168	285	116	236	7.88e-28	110
Msa1338610	AT1G12030.1	44.538	119	65	1	168	285	118	236	2.21e-27	109
Msa1338610	AT1G77145.1	38.462	143	67	3	157	278	69	211	1.10e-25	104
Msa1338610	AT1G77160.2	39.161	143	66	4	157	278	19	161	4.00e-25	101
Msa1338610	AT1G77160.1	33.898	177	95	5	123	278	41	216	7.00e-25	102
Msa1338610	AT2G20670.1	32.418	182	106	3	119	283	66	247	1.53e-24	102
Msa1338610	AT1G77145.2	43.299	97	45	1	192	278	58	154	5.92e-21	90.1

Find 86 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATATATATTGTTGGTTAAT+TGG	0.113934	tig0002300:+19031	Msa1338610:three_prime_UTR
GAAACAGAGTTTGAAGAAAA+AGG	0.228804	tig0002300:+18493	Msa1338610:CDS
GAATACATTGATGTGGTAAT+AGG	0.271907	tig0002300:+18314	Msa1338610:CDS
CTAACAGCTCTATCCCCTTC+TGG	0.307484	tig0002300:+18925	Msa1338610:three_prime_UTR
CTCTGTTCAGACTGGGGTTA+AGG	0.326705	tig0002300:+18745	Msa1338610:CDS
TATTACCTTAAGAATTTCAT+AGG	0.344890	tig0002300:-17878	None:intergenic
GCCGATCGATTCTCAGATTC+CGG	0.346655	tig0002300:+17543	Msa1338610:CDS
TTCGCAAGACACACTGAGTT+TGG	0.349350	tig0002300:-17721	None:intergenic
GCTTGTGTAAGTACTGTAAT+AGG	0.350912	tig0002300:+18902	Msa1338610:three_prime_UTR
TCGAATACGTTAGATCAAAA+TGG	0.354614	tig0002300:+18543	Msa1338610:CDS
TTGATCGGCGGCGGTGAGTC+TGG	0.364358	tig0002300:+18653	Msa1338610:CDS
GAGAATCACTTTGTAAGCTT+TGG	0.371639	tig0002300:-18396	None:intergenic
ATTGATGGATTGTTGAATCT+TGG	0.376735	tig0002300:+18122	Msa1338610:CDS
CGGTTGCGTGGCCGGAGAAA+TGG	0.398684	tig0002300:-17268	None:intergenic
AGTTGATGAATATATATTGT+TGG	0.399454	tig0002300:+19023	Msa1338610:three_prime_UTR
AAGTTTCTTTCATTAACATT+TGG	0.413551	tig0002300:-18020	None:intergenic
ATGAAGATCGGTTGCGTGGC+CGG	0.429554	tig0002300:-17276	None:intergenic
CGAATACATAAGGAAGCGTT+TGG	0.430093	tig0002300:-18418	None:intergenic
GCGCTTGGTGGTGGTACATC+TGG	0.432758	tig0002300:+17850	Msa1338610:CDS
GGTTAAGGTTGTGACTGGTT+TGG	0.439989	tig0002300:+18760	Msa1338610:CDS
CTCAGTGTGTCTTGCGAAGA+TGG	0.440701	tig0002300:+17726	Msa1338610:CDS
TGGGTGAAGAAGAGAGGATA+AGG	0.443010	tig0002300:-17177	None:intergenic
TGAAGCCTATGAAATTCTTA+AGG	0.450279	tig0002300:+17873	Msa1338610:CDS
CTTCAATTTGTAAATCTCGC+TGG	0.450704	tig0002300:+18153	Msa1338610:CDS
GGTAATCTCCGGCGAGTAGT+TGG	0.468806	tig0002300:-17247	None:intergenic
CGGTTTCTTGTTTGCGCGTG+AGG	0.469605	tig0002300:-17202	None:intergenic
CTTGTTTGCGCGTGAGGTGT+GGG	0.470067	tig0002300:-17196	None:intergenic
ATTACCTGCTATACAGAAAG+TGG	0.473400	tig0002300:-18183	None:intergenic
TTCAATTTGTAAATCTCGCT+GGG	0.477588	tig0002300:+18154	Msa1338610:CDS
AGTCAAAAGTGGTGGTTGAA+TGG	0.479321	tig0002300:+18696	Msa1338610:CDS
CGCTTCCTTATGTATTCGTA+GGG	0.482238	tig0002300:+18423	Msa1338610:CDS
GACAGTGAACTTCACGCGCT+TGG	0.484979	tig0002300:+17835	Msa1338610:CDS
TCTTGTTTGCGCGTGAGGTG+TGG	0.485137	tig0002300:-17197	None:intergenic
GCGTAGATGCGGCTCATCTC+CGG	0.486206	tig0002300:-17662	None:intergenic
AAATCCACTTTCTGTATAGC+AGG	0.488720	tig0002300:+18179	Msa1338610:CDS
ACTGGGGTTAAGGTTGTGAC+TGG	0.490506	tig0002300:+18755	Msa1338610:CDS
CTCTTCCCTACGAATACATA+AGG	0.499623	tig0002300:-18428	None:intergenic
AAACCGAGTCTTCACTCGTC+GGG	0.501101	tig0002300:+17219	Msa1338610:five_prime_UTR
GAACTTCACGCGCTTGGTGG+TGG	0.503545	tig0002300:+17841	Msa1338610:CDS
GGTGGTGTAATTCTTGTGTA+AGG	0.506637	tig0002300:-18572	None:intergenic
TTCAACGGAAACTTCGACGA+TGG	0.520096	tig0002300:+17808	Msa1338610:CDS
TTTCCCGACGAGTGAAGACT+CGG	0.523526	tig0002300:-17222	None:intergenic
ACGCTTCCTTATGTATTCGT+AGG	0.529019	tig0002300:+18422	Msa1338610:CDS
GCCGGAGATTACCATTTCTC+CGG	0.529242	tig0002300:+17257	Msa1338610:five_prime_UTR
GAGGTGTGGGTGAAGAAGAG+AGG	0.535437	tig0002300:-17183	None:intergenic
TTCAGCCGCGACTTGACGAC+CGG	0.537184	tig0002300:-17580	None:intergenic
TTTCGCTGCCTCAGATGCTA+TGG	0.541059	tig0002300:-18474	None:intergenic
AGGGTTTGCATGTTCCACCT+TGG	0.550630	tig0002300:+18513	Msa1338610:CDS
GGCTGAATCTTCATTGTGAA+AGG	0.554368	tig0002300:-17523	None:intergenic
GCCGGAGAAATGGTAATCTC+CGG	0.557938	tig0002300:-17258	None:intergenic
AGTGAACTTCACGCGCTTGG+TGG	0.563216	tig0002300:+17838	Msa1338610:CDS
CATTGATGTGGTAATAGGAA+AGG	0.564023	tig0002300:+18319	Msa1338610:CDS
ATACAGAGAAAATAGAGTAA+TGG	0.573354	tig0002300:-17401	None:intergenic
TATTCGTAGGGAAGAGTGAT+CGG	0.580857	tig0002300:+18435	Msa1338610:CDS
ACCGGCTTAATCCTCTCTGC+CGG	0.582629	tig0002300:-17562	None:intergenic
TAATGAAAGAAACTTGTTAG+CGG	0.583047	tig0002300:+18028	Msa1338610:CDS
CCACCACCGGAAAAGATCGC+CGG	0.591984	tig0002300:+17643	Msa1338610:CDS
GAACCGTCCTTGCGTAGATG+CGG	0.593446	tig0002300:-17673	None:intergenic
GCCGGAATCTGAGAATCGAT+CGG	0.595449	tig0002300:-17544	None:intergenic
TATTGTAGCCATAGCATCTG+AGG	0.596656	tig0002300:+18466	Msa1338610:CDS
AGATGAGCCGCATCTACGCA+AGG	0.602105	tig0002300:+17666	Msa1338610:CDS
TGTGCTCGTAACTGCTTCAA+CGG	0.602134	tig0002300:+17793	Msa1338610:CDS
ATGTGGTAATAGGAAAGGAG+AGG	0.603084	tig0002300:+18324	Msa1338610:CDS
AGGAAACAGAGAGAAAACAG+AGG	0.611141	tig0002300:+18627	Msa1338610:CDS
TGACATCATGAAATGAAGAT+CGG	0.612887	tig0002300:-17288	None:intergenic
GGGAAATTCCAACTACTCGC+CGG	0.621856	tig0002300:+17239	Msa1338610:five_prime_UTR
TCCGGCAGAGAGGATTAAGC+CGG	0.628109	tig0002300:+17561	Msa1338610:CDS
CGTGACCAAGGACAAAACAT+AGG	0.628493	tig0002300:-18593	None:intergenic
TGTGGTAATAGGAAAGGAGA+GGG	0.630701	tig0002300:+18325	Msa1338610:CDS
TGAAATGAAGATCGGTTGCG+TGG	0.635293	tig0002300:-17280	None:intergenic
GAAACCGAGTCTTCACTCGT+CGG	0.639513	tig0002300:+17218	Msa1338610:five_prime_UTR
GAGCCGCATCTACGCAAGGA+CGG	0.639874	tig0002300:+17670	Msa1338610:CDS
TTAAGCCGGTCGTCAAGTCG+CGG	0.642301	tig0002300:+17575	Msa1338610:CDS
GGTGAGTCTGGACAGAGTGG+TGG	0.647788	tig0002300:+18665	Msa1338610:CDS
TCACTGATTTCACGTGACCA+AGG	0.649691	tig0002300:-18605	None:intergenic
CGTTCTGAAGAATCCACCAC+CGG	0.660886	tig0002300:+17630	Msa1338610:CDS
TGGTGGATTCTTCAGAACGC+CGG	0.661044	tig0002300:-17626	None:intergenic
GGCGGTGAGTCTGGACAGAG+TGG	0.665048	tig0002300:+18662	Msa1338610:CDS
GGAAACAGAGAGAAAACAGA+GGG	0.667200	tig0002300:+18628	Msa1338610:CDS
TGAATATGAATACATTGATG+TGG	0.676544	tig0002300:+18307	Msa1338610:CDS
ATTCTCAGATTCCGGCAGAG+AGG	0.685646	tig0002300:+17551	Msa1338610:CDS
GACCAAGGACAAAACATAGG+TGG	0.690820	tig0002300:-18590	None:intergenic
AAGCGCGTGAAGTTCACTGT+CGG	0.695670	tig0002300:-17833	None:intergenic
TGGTGAGTCAGAGTCAAAAG+TGG	0.696161	tig0002300:+18685	Msa1338610:CDS
TGAGTCAGAGTCAAAAGTGG+TGG	0.721751	tig0002300:+18688	Msa1338610:CDS
TTGGTCACGTGAAATCAGTG+AGG	0.759557	tig0002300:+18607	Msa1338610:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAAAAATAGTAACAATTAA+CGG	-	tig0002300:17982-18001	None:intergenic	10.0%
!!!	AAAATCTCATTTTTTTTTTT+GGG	-	tig0002300:18827-18846	None:intergenic	10.0%
!!!	AAAAATCTCATTTTTTTTTT+TGG	-	tig0002300:18828-18847	None:intergenic	10.0%
!!	TTAAAAATAGTAACAATTAA+CGG	-	tig0002300:17982-18001	None:intergenic	10.0%
!!!	AAAATCTCATTTTTTTTTTT+GGG	-	tig0002300:18827-18846	None:intergenic	10.0%
!!!	AAAAATCTCATTTTTTTTTT+TGG	-	tig0002300:18828-18847	None:intergenic	10.0%
!!!	TAATTGTTACTATTTTTAAC+AGG	+	tig0002300:17983-18002	Msa1338610:intron	15.0%
!!!	AATTGTTACTATTTTTAACA+GGG	+	tig0002300:17984-18003	Msa1338610:intron	15.0%
!!!	TAATTGTTACTATTTTTAAC+AGG	+	tig0002300:17983-18002	Msa1338610:intron	15.0%
!!!	AATTGTTACTATTTTTAACA+GGG	+	tig0002300:17984-18003	Msa1338610:intron	15.0%
!!	TATTACCTTAAGAATTTCAT+AGG	-	tig0002300:17881-17900	None:intergenic	20.0%
!!	AATTAATTAAACCGATAAGT+TGG	+	tig0002300:17923-17942	Msa1338610:intron	20.0%
!!	TTAATTAATCTCCAACTTAT+CGG	-	tig0002300:17937-17956	None:intergenic	20.0%
!!	AAGTTTCTTTCATTAACATT+TGG	-	tig0002300:18023-18042	None:intergenic	20.0%
!!	GTTAAAAAACAAAACTTCAT+GGG	-	tig0002300:18805-18824	None:intergenic	20.0%
!!!	AGTTGATGAATATATATTGT+TGG	+	tig0002300:19023-19042	Msa1338610:three_prime_UTR	20.0%
!!	TATTACCTTAAGAATTTCAT+AGG	-	tig0002300:17881-17900	None:intergenic	20.0%
!!	AATTAATTAAACCGATAAGT+TGG	+	tig0002300:17923-17942	Msa1338610:intron	20.0%
!!	TTAATTAATCTCCAACTTAT+CGG	-	tig0002300:17937-17956	None:intergenic	20.0%
!!	AAGTTTCTTTCATTAACATT+TGG	-	tig0002300:18023-18042	None:intergenic	20.0%
!!	GTTAAAAAACAAAACTTCAT+GGG	-	tig0002300:18805-18824	None:intergenic	20.0%
!!!	AGTTGATGAATATATATTGT+TGG	+	tig0002300:19023-19042	Msa1338610:three_prime_UTR	20.0%
!	ATACAGAGAAAATAGAGTAA+TGG	-	tig0002300:17404-17423	None:intergenic	25.0%
!!!	TTACTATTTTTAACAGGGTT+TGG	+	tig0002300:17989-18008	Msa1338610:intron	25.0%
!!!	TAATGAAAGAAACTTGTTAG+CGG	+	tig0002300:18028-18047	Msa1338610:CDS	25.0%
!!	TGCAGAAAAATTGTTATTGA+TGG	+	tig0002300:18107-18126	Msa1338610:CDS	25.0%
!!!	TGTCTGATACAATTTTTTCA+TGG	-	tig0002300:18217-18236	None:intergenic	25.0%
!	TGAATATGAATACATTGATG+TGG	+	tig0002300:18307-18326	Msa1338610:CDS	25.0%
!	AAACAGAGTTTGAAGAAAAA+GGG	+	tig0002300:18494-18513	Msa1338610:CDS	25.0%
!	GGTTAAAAAACAAAACTTCA+TGG	-	tig0002300:18806-18825	None:intergenic	25.0%
!	TTACAATAAAAAACCAGAAG+GGG	-	tig0002300:18941-18960	None:intergenic	25.0%
!	CTTACAATAAAAAACCAGAA+GGG	-	tig0002300:18942-18961	None:intergenic	25.0%
!!!	CTTCTGGTTTTTTATTGTAA+GGG	+	tig0002300:18941-18960	Msa1338610:three_prime_UTR	25.0%
!	ATACAGAGAAAATAGAGTAA+TGG	-	tig0002300:17404-17423	None:intergenic	25.0%
!!!	TTACTATTTTTAACAGGGTT+TGG	+	tig0002300:17989-18008	Msa1338610:intron	25.0%
!!!	TAATGAAAGAAACTTGTTAG+CGG	+	tig0002300:18028-18047	Msa1338610:CDS	25.0%
!!	TGCAGAAAAATTGTTATTGA+TGG	+	tig0002300:18107-18126	Msa1338610:CDS	25.0%
!!!	TGTCTGATACAATTTTTTCA+TGG	-	tig0002300:18217-18236	None:intergenic	25.0%
!	TGAATATGAATACATTGATG+TGG	+	tig0002300:18307-18326	Msa1338610:CDS	25.0%
!	AAACAGAGTTTGAAGAAAAA+GGG	+	tig0002300:18494-18513	Msa1338610:CDS	25.0%
!	GGTTAAAAAACAAAACTTCA+TGG	-	tig0002300:18806-18825	None:intergenic	25.0%
!	TTACAATAAAAAACCAGAAG+GGG	-	tig0002300:18941-18960	None:intergenic	25.0%
!	CTTACAATAAAAAACCAGAA+GGG	-	tig0002300:18942-18961	None:intergenic	25.0%
!!!	CTTCTGGTTTTTTATTGTAA+GGG	+	tig0002300:18941-18960	Msa1338610:three_prime_UTR	25.0%
	TGACATCATGAAATGAAGAT+CGG	-	tig0002300:17291-17310	None:intergenic	30.0%
!!!	AGTAAAGTTGCTTTTGCTTA+GGG	-	tig0002300:17360-17379	None:intergenic	30.0%
!!!	AAGTAAAGTTGCTTTTGCTT+AGG	-	tig0002300:17361-17380	None:intergenic	30.0%
	TGAAGCCTATGAAATTCTTA+AGG	+	tig0002300:17873-17892	Msa1338610:CDS	30.0%
!!	ATTGATGGATTGTTGAATCT+TGG	+	tig0002300:18122-18141	Msa1338610:CDS	30.0%
	TTCAATTTGTAAATCTCGCT+GGG	+	tig0002300:18154-18173	Msa1338610:CDS	30.0%
!	TATCAGACACTTTTGATCAA+AGG	+	tig0002300:18228-18247	Msa1338610:intron	30.0%
	GAATACATTGATGTGGTAAT+AGG	+	tig0002300:18314-18333	Msa1338610:CDS	30.0%
	GAAACAGAGTTTGAAGAAAA+AGG	+	tig0002300:18493-18512	Msa1338610:CDS	30.0%
	TCGAATACGTTAGATCAAAA+TGG	+	tig0002300:18543-18562	Msa1338610:CDS	30.0%
	CCTTACAATAAAAAACCAGA+AGG	-	tig0002300:18943-18962	None:intergenic	30.0%
!!!	CCTTCTGGTTTTTTATTGTA+AGG	+	tig0002300:18940-18959	Msa1338610:three_prime_UTR	30.0%
!!!	TGGTTTTTTATTGTAAGGGA+TGG	+	tig0002300:18945-18964	Msa1338610:three_prime_UTR	30.0%
!!!	GGTTTTTTATTGTAAGGGAT+GGG	+	tig0002300:18946-18965	Msa1338610:three_prime_UTR	30.0%
	TGACATCATGAAATGAAGAT+CGG	-	tig0002300:17291-17310	None:intergenic	30.0%
!!!	AGTAAAGTTGCTTTTGCTTA+GGG	-	tig0002300:17360-17379	None:intergenic	30.0%
!!!	AAGTAAAGTTGCTTTTGCTT+AGG	-	tig0002300:17361-17380	None:intergenic	30.0%
	TGAAGCCTATGAAATTCTTA+AGG	+	tig0002300:17873-17892	Msa1338610:CDS	30.0%
!!	ATTGATGGATTGTTGAATCT+TGG	+	tig0002300:18122-18141	Msa1338610:CDS	30.0%
	TTCAATTTGTAAATCTCGCT+GGG	+	tig0002300:18154-18173	Msa1338610:CDS	30.0%
!	TATCAGACACTTTTGATCAA+AGG	+	tig0002300:18228-18247	Msa1338610:intron	30.0%
	GAATACATTGATGTGGTAAT+AGG	+	tig0002300:18314-18333	Msa1338610:CDS	30.0%
	GAAACAGAGTTTGAAGAAAA+AGG	+	tig0002300:18493-18512	Msa1338610:CDS	30.0%
	TCGAATACGTTAGATCAAAA+TGG	+	tig0002300:18543-18562	Msa1338610:CDS	30.0%
	CCTTACAATAAAAAACCAGA+AGG	-	tig0002300:18943-18962	None:intergenic	30.0%
!!!	CCTTCTGGTTTTTTATTGTA+AGG	+	tig0002300:18940-18959	Msa1338610:three_prime_UTR	30.0%
!!!	TGGTTTTTTATTGTAAGGGA+TGG	+	tig0002300:18945-18964	Msa1338610:three_prime_UTR	30.0%
!!!	GGTTTTTTATTGTAAGGGAT+GGG	+	tig0002300:18946-18965	Msa1338610:three_prime_UTR	30.0%
!!!	CTATTTTTAACAGGGTTTGG+TGG	+	tig0002300:17992-18011	Msa1338610:intron	35.0%
	CTTCAATTTGTAAATCTCGC+TGG	+	tig0002300:18153-18172	Msa1338610:CDS	35.0%
	AAATCCACTTTCTGTATAGC+AGG	+	tig0002300:18179-18198	Msa1338610:CDS	35.0%
	ATTACCTGCTATACAGAAAG+TGG	-	tig0002300:18186-18205	None:intergenic	35.0%
	CATTGATGTGGTAATAGGAA+AGG	+	tig0002300:18319-18338	Msa1338610:CDS	35.0%
	GAGAATCACTTTGTAAGCTT+TGG	-	tig0002300:18399-18418	None:intergenic	35.0%
!!	AGAAAACAGAGGGTTTTGAT+CGG	+	tig0002300:18638-18657	Msa1338610:CDS	35.0%
!!!	TTTTTGGGTTTCAATTCTGG+TGG	-	tig0002300:18725-18744	None:intergenic	35.0%
!!!	GAGTTTTTGGGTTTCAATTC+TGG	-	tig0002300:18728-18747	None:intergenic	35.0%
!	GCTTGTGTAAGTACTGTAAT+AGG	+	tig0002300:18902-18921	Msa1338610:three_prime_UTR	35.0%
!!!	CTATTTTTAACAGGGTTTGG+TGG	+	tig0002300:17992-18011	Msa1338610:intron	35.0%
	CTTCAATTTGTAAATCTCGC+TGG	+	tig0002300:18153-18172	Msa1338610:CDS	35.0%
	AAATCCACTTTCTGTATAGC+AGG	+	tig0002300:18179-18198	Msa1338610:CDS	35.0%
	ATTACCTGCTATACAGAAAG+TGG	-	tig0002300:18186-18205	None:intergenic	35.0%
	CATTGATGTGGTAATAGGAA+AGG	+	tig0002300:18319-18338	Msa1338610:CDS	35.0%
	GAGAATCACTTTGTAAGCTT+TGG	-	tig0002300:18399-18418	None:intergenic	35.0%
!!	AGAAAACAGAGGGTTTTGAT+CGG	+	tig0002300:18638-18657	Msa1338610:CDS	35.0%
!!!	TTTTTGGGTTTCAATTCTGG+TGG	-	tig0002300:18725-18744	None:intergenic	35.0%
!!!	GAGTTTTTGGGTTTCAATTC+TGG	-	tig0002300:18728-18747	None:intergenic	35.0%
!	GCTTGTGTAAGTACTGTAAT+AGG	+	tig0002300:18902-18921	Msa1338610:three_prime_UTR	35.0%
	GGCTGAATCTTCATTGTGAA+AGG	-	tig0002300:17526-17545	None:intergenic	40.0%
!!	ACACTTTTGATCAAAGGCGT+CGG	+	tig0002300:18234-18253	Msa1338610:intron	40.0%
	ATGTGGTAATAGGAAAGGAG+AGG	+	tig0002300:18324-18343	Msa1338610:CDS	40.0%
	TGTGGTAATAGGAAAGGAGA+GGG	+	tig0002300:18325-18344	Msa1338610:CDS	40.0%
!!	CGAATACATAAGGAAGCGTT+TGG	-	tig0002300:18421-18440	None:intergenic	40.0%
	ACGCTTCCTTATGTATTCGT+AGG	+	tig0002300:18422-18441	Msa1338610:CDS	40.0%
	CGCTTCCTTATGTATTCGTA+GGG	+	tig0002300:18423-18442	Msa1338610:CDS	40.0%
	CTCTTCCCTACGAATACATA+AGG	-	tig0002300:18431-18450	None:intergenic	40.0%
	TATTCGTAGGGAAGAGTGAT+CGG	+	tig0002300:18435-18454	Msa1338610:CDS	40.0%
	TATTGTAGCCATAGCATCTG+AGG	+	tig0002300:18466-18485	Msa1338610:CDS	40.0%
!!	TATTCGAGTTTTCTCCAAGG+TGG	-	tig0002300:18530-18549	None:intergenic	40.0%
!!	ACGTATTCGAGTTTTCTCCA+AGG	-	tig0002300:18533-18552	None:intergenic	40.0%
	GGTGGTGTAATTCTTGTGTA+AGG	-	tig0002300:18575-18594	None:intergenic	40.0%
	AGGAAACAGAGAGAAAACAG+AGG	+	tig0002300:18627-18646	Msa1338610:CDS	40.0%
	GGAAACAGAGAGAAAACAGA+GGG	+	tig0002300:18628-18647	Msa1338610:CDS	40.0%
	AGTCAAAAGTGGTGGTTGAA+TGG	+	tig0002300:18696-18715	Msa1338610:CDS	40.0%
!	CCAGTCTGAACAGAGTTTTT+GGG	-	tig0002300:18740-18759	None:intergenic	40.0%
	CCAAAAACTCTGTTCAGACT+GGG	+	tig0002300:18738-18757	Msa1338610:CDS	40.0%
	CAAAAACTCTGTTCAGACTG+GGG	+	tig0002300:18739-18758	Msa1338610:CDS	40.0%
	GGCTGAATCTTCATTGTGAA+AGG	-	tig0002300:17526-17545	None:intergenic	40.0%
!!	ACACTTTTGATCAAAGGCGT+CGG	+	tig0002300:18234-18253	Msa1338610:intron	40.0%
	ATGTGGTAATAGGAAAGGAG+AGG	+	tig0002300:18324-18343	Msa1338610:CDS	40.0%
	TGTGGTAATAGGAAAGGAGA+GGG	+	tig0002300:18325-18344	Msa1338610:CDS	40.0%
!!	CGAATACATAAGGAAGCGTT+TGG	-	tig0002300:18421-18440	None:intergenic	40.0%
	ACGCTTCCTTATGTATTCGT+AGG	+	tig0002300:18422-18441	Msa1338610:CDS	40.0%
	CGCTTCCTTATGTATTCGTA+GGG	+	tig0002300:18423-18442	Msa1338610:CDS	40.0%
	CTCTTCCCTACGAATACATA+AGG	-	tig0002300:18431-18450	None:intergenic	40.0%
	TATTCGTAGGGAAGAGTGAT+CGG	+	tig0002300:18435-18454	Msa1338610:CDS	40.0%
	TATTGTAGCCATAGCATCTG+AGG	+	tig0002300:18466-18485	Msa1338610:CDS	40.0%
!!	TATTCGAGTTTTCTCCAAGG+TGG	-	tig0002300:18530-18549	None:intergenic	40.0%
!!	ACGTATTCGAGTTTTCTCCA+AGG	-	tig0002300:18533-18552	None:intergenic	40.0%
	GGTGGTGTAATTCTTGTGTA+AGG	-	tig0002300:18575-18594	None:intergenic	40.0%
	AGGAAACAGAGAGAAAACAG+AGG	+	tig0002300:18627-18646	Msa1338610:CDS	40.0%
	GGAAACAGAGAGAAAACAGA+GGG	+	tig0002300:18628-18647	Msa1338610:CDS	40.0%
	AGTCAAAAGTGGTGGTTGAA+TGG	+	tig0002300:18696-18715	Msa1338610:CDS	40.0%
!	CCAGTCTGAACAGAGTTTTT+GGG	-	tig0002300:18740-18759	None:intergenic	40.0%
	CCAAAAACTCTGTTCAGACT+GGG	+	tig0002300:18738-18757	Msa1338610:CDS	40.0%
	CAAAAACTCTGTTCAGACTG+GGG	+	tig0002300:18739-18758	Msa1338610:CDS	40.0%
	TGGGTGAAGAAGAGAGGATA+AGG	-	tig0002300:17180-17199	None:intergenic	45.0%
	TGAAATGAAGATCGGTTGCG+TGG	-	tig0002300:17283-17302	None:intergenic	45.0%
!!	CTTTTCGAGCGACAATTCTC+CGG	+	tig0002300:17607-17626	Msa1338610:CDS	45.0%
	TTCGCAAGACACACTGAGTT+TGG	-	tig0002300:17724-17743	None:intergenic	45.0%
	TGTGCTCGTAACTGCTTCAA+CGG	+	tig0002300:17793-17812	Msa1338610:CDS	45.0%
	TTCAACGGAAACTTCGACGA+TGG	+	tig0002300:17808-17827	Msa1338610:CDS	45.0%
!	CACCACCTATGTTTTGTCCT+TGG	+	tig0002300:18588-18607	Msa1338610:CDS	45.0%
	GACCAAGGACAAAACATAGG+TGG	-	tig0002300:18593-18612	None:intergenic	45.0%
	CGTGACCAAGGACAAAACAT+AGG	-	tig0002300:18596-18615	None:intergenic	45.0%
!!	TCACTGATTTCACGTGACCA+AGG	-	tig0002300:18608-18627	None:intergenic	45.0%
	TTGGTCACGTGAAATCAGTG+AGG	+	tig0002300:18607-18626	Msa1338610:CDS	45.0%
!!	AAACAGAGGGTTTTGATCGG+CGG	+	tig0002300:18641-18660	Msa1338610:CDS	45.0%
	TGGTGAGTCAGAGTCAAAAG+TGG	+	tig0002300:18685-18704	Msa1338610:CDS	45.0%
	TGAGTCAGAGTCAAAAGTGG+TGG	+	tig0002300:18688-18707	Msa1338610:CDS	45.0%
	CCCAAAAACTCTGTTCAGAC+TGG	+	tig0002300:18737-18756	Msa1338610:CDS	45.0%
!	CCCAGTCTGAACAGAGTTTT+TGG	-	tig0002300:18741-18760	None:intergenic	45.0%
!	GGTTAAGGTTGTGACTGGTT+TGG	+	tig0002300:18760-18779	Msa1338610:CDS	45.0%
	TGGGTGAAGAAGAGAGGATA+AGG	-	tig0002300:17180-17199	None:intergenic	45.0%
	TGAAATGAAGATCGGTTGCG+TGG	-	tig0002300:17283-17302	None:intergenic	45.0%
!!	CTTTTCGAGCGACAATTCTC+CGG	+	tig0002300:17607-17626	Msa1338610:CDS	45.0%
	TTCGCAAGACACACTGAGTT+TGG	-	tig0002300:17724-17743	None:intergenic	45.0%
	TGTGCTCGTAACTGCTTCAA+CGG	+	tig0002300:17793-17812	Msa1338610:CDS	45.0%
	TTCAACGGAAACTTCGACGA+TGG	+	tig0002300:17808-17827	Msa1338610:CDS	45.0%
!	CACCACCTATGTTTTGTCCT+TGG	+	tig0002300:18588-18607	Msa1338610:CDS	45.0%
	GACCAAGGACAAAACATAGG+TGG	-	tig0002300:18593-18612	None:intergenic	45.0%
	CGTGACCAAGGACAAAACAT+AGG	-	tig0002300:18596-18615	None:intergenic	45.0%
!!	TCACTGATTTCACGTGACCA+AGG	-	tig0002300:18608-18627	None:intergenic	45.0%
	TTGGTCACGTGAAATCAGTG+AGG	+	tig0002300:18607-18626	Msa1338610:CDS	45.0%
!!	AAACAGAGGGTTTTGATCGG+CGG	+	tig0002300:18641-18660	Msa1338610:CDS	45.0%
	TGGTGAGTCAGAGTCAAAAG+TGG	+	tig0002300:18685-18704	Msa1338610:CDS	45.0%
	TGAGTCAGAGTCAAAAGTGG+TGG	+	tig0002300:18688-18707	Msa1338610:CDS	45.0%
	CCCAAAAACTCTGTTCAGAC+TGG	+	tig0002300:18737-18756	Msa1338610:CDS	45.0%
!	CCCAGTCTGAACAGAGTTTT+TGG	-	tig0002300:18741-18760	None:intergenic	45.0%
!	GGTTAAGGTTGTGACTGGTT+TGG	+	tig0002300:18760-18779	Msa1338610:CDS	45.0%
!!!	ATTTATTTGTATAATTTTTT+AGG	+	tig0002300:18284-18303	Msa1338610:intron	5.0%
!!!	ATTTATTTGTATAATTTTTT+AGG	+	tig0002300:18284-18303	Msa1338610:intron	5.0%
	GAAACCGAGTCTTCACTCGT+CGG	+	tig0002300:17218-17237	Msa1338610:five_prime_UTR	50.0%
	AAACCGAGTCTTCACTCGTC+GGG	+	tig0002300:17219-17238	Msa1338610:five_prime_UTR	50.0%
	TTTCCCGACGAGTGAAGACT+CGG	-	tig0002300:17225-17244	None:intergenic	50.0%
	GGGAAATTCCAACTACTCGC+CGG	+	tig0002300:17239-17258	Msa1338610:five_prime_UTR	50.0%
	GCCGGAGATTACCATTTCTC+CGG	+	tig0002300:17257-17276	Msa1338610:five_prime_UTR	50.0%
	GCCGGAGAAATGGTAATCTC+CGG	-	tig0002300:17261-17280	None:intergenic	50.0%
!	GCCGATCGATTCTCAGATTC+CGG	+	tig0002300:17543-17562	Msa1338610:CDS	50.0%
	GCCGGAATCTGAGAATCGAT+CGG	-	tig0002300:17547-17566	None:intergenic	50.0%
	ATTCTCAGATTCCGGCAGAG+AGG	+	tig0002300:17551-17570	Msa1338610:CDS	50.0%
!!	TGGTGGATTCTTCAGAACGC+CGG	-	tig0002300:17629-17648	None:intergenic	50.0%
!!	CGTTCTGAAGAATCCACCAC+CGG	+	tig0002300:17630-17649	Msa1338610:CDS	50.0%
!	TCATCTCCGGCGATCTTTTC+CGG	-	tig0002300:17652-17671	None:intergenic	50.0%
	CTCAGTGTGTCTTGCGAAGA+TGG	+	tig0002300:17726-17745	Msa1338610:CDS	50.0%
	AAGCGCGTGAAGTTCACTGT+CGG	-	tig0002300:17836-17855	None:intergenic	50.0%
	TTTCGCTGCCTCAGATGCTA+TGG	-	tig0002300:18477-18496	None:intergenic	50.0%
	AGGGTTTGCATGTTCCACCT+TGG	+	tig0002300:18513-18532	Msa1338610:CDS	50.0%
	CTCTGTTCAGACTGGGGTTA+AGG	+	tig0002300:18745-18764	Msa1338610:CDS	50.0%
	ACTGGGGTTAAGGTTGTGAC+TGG	+	tig0002300:18755-18774	Msa1338610:CDS	50.0%
	CTAACAGCTCTATCCCCTTC+TGG	+	tig0002300:18925-18944	Msa1338610:three_prime_UTR	50.0%
	GAAACCGAGTCTTCACTCGT+CGG	+	tig0002300:17218-17237	Msa1338610:five_prime_UTR	50.0%
	AAACCGAGTCTTCACTCGTC+GGG	+	tig0002300:17219-17238	Msa1338610:five_prime_UTR	50.0%
	TTTCCCGACGAGTGAAGACT+CGG	-	tig0002300:17225-17244	None:intergenic	50.0%
	GGGAAATTCCAACTACTCGC+CGG	+	tig0002300:17239-17258	Msa1338610:five_prime_UTR	50.0%
	GCCGGAGATTACCATTTCTC+CGG	+	tig0002300:17257-17276	Msa1338610:five_prime_UTR	50.0%
	GCCGGAGAAATGGTAATCTC+CGG	-	tig0002300:17261-17280	None:intergenic	50.0%
!	GCCGATCGATTCTCAGATTC+CGG	+	tig0002300:17543-17562	Msa1338610:CDS	50.0%
	GCCGGAATCTGAGAATCGAT+CGG	-	tig0002300:17547-17566	None:intergenic	50.0%
	ATTCTCAGATTCCGGCAGAG+AGG	+	tig0002300:17551-17570	Msa1338610:CDS	50.0%
!!	TGGTGGATTCTTCAGAACGC+CGG	-	tig0002300:17629-17648	None:intergenic	50.0%
!!	CGTTCTGAAGAATCCACCAC+CGG	+	tig0002300:17630-17649	Msa1338610:CDS	50.0%
!	TCATCTCCGGCGATCTTTTC+CGG	-	tig0002300:17652-17671	None:intergenic	50.0%
	CTCAGTGTGTCTTGCGAAGA+TGG	+	tig0002300:17726-17745	Msa1338610:CDS	50.0%
	AAGCGCGTGAAGTTCACTGT+CGG	-	tig0002300:17836-17855	None:intergenic	50.0%
	TTTCGCTGCCTCAGATGCTA+TGG	-	tig0002300:18477-18496	None:intergenic	50.0%
	AGGGTTTGCATGTTCCACCT+TGG	+	tig0002300:18513-18532	Msa1338610:CDS	50.0%
	CTCTGTTCAGACTGGGGTTA+AGG	+	tig0002300:18745-18764	Msa1338610:CDS	50.0%
	ACTGGGGTTAAGGTTGTGAC+TGG	+	tig0002300:18755-18774	Msa1338610:CDS	50.0%
	CTAACAGCTCTATCCCCTTC+TGG	+	tig0002300:18925-18944	Msa1338610:three_prime_UTR	50.0%
	GAGGTGTGGGTGAAGAAGAG+AGG	-	tig0002300:17186-17205	None:intergenic	55.0%
	CTTGTTTGCGCGTGAGGTGT+GGG	-	tig0002300:17199-17218	None:intergenic	55.0%
!	TCTTGTTTGCGCGTGAGGTG+TGG	-	tig0002300:17200-17219	None:intergenic	55.0%
!	CGGTTTCTTGTTTGCGCGTG+AGG	-	tig0002300:17205-17224	None:intergenic	55.0%
	GGTAATCTCCGGCGAGTAGT+TGG	-	tig0002300:17250-17269	None:intergenic	55.0%
	ATGAAGATCGGTTGCGTGGC+CGG	-	tig0002300:17279-17298	None:intergenic	55.0%
	TCCGGCAGAGAGGATTAAGC+CGG	+	tig0002300:17561-17580	Msa1338610:CDS	55.0%
!	ACCGGCTTAATCCTCTCTGC+CGG	-	tig0002300:17565-17584	None:intergenic	55.0%
	TTAAGCCGGTCGTCAAGTCG+CGG	+	tig0002300:17575-17594	Msa1338610:CDS	55.0%
	AGATGAGCCGCATCTACGCA+AGG	+	tig0002300:17666-17685	Msa1338610:CDS	55.0%
	GAACCGTCCTTGCGTAGATG+CGG	-	tig0002300:17676-17695	None:intergenic	55.0%
	GACAGTGAACTTCACGCGCT+TGG	+	tig0002300:17835-17854	Msa1338610:CDS	55.0%
	AGTGAACTTCACGCGCTTGG+TGG	+	tig0002300:17838-17857	Msa1338610:CDS	55.0%
	GAGGTGTGGGTGAAGAAGAG+AGG	-	tig0002300:17186-17205	None:intergenic	55.0%
	CTTGTTTGCGCGTGAGGTGT+GGG	-	tig0002300:17199-17218	None:intergenic	55.0%
!	TCTTGTTTGCGCGTGAGGTG+TGG	-	tig0002300:17200-17219	None:intergenic	55.0%
!	CGGTTTCTTGTTTGCGCGTG+AGG	-	tig0002300:17205-17224	None:intergenic	55.0%
	GGTAATCTCCGGCGAGTAGT+TGG	-	tig0002300:17250-17269	None:intergenic	55.0%
	ATGAAGATCGGTTGCGTGGC+CGG	-	tig0002300:17279-17298	None:intergenic	55.0%
	TCCGGCAGAGAGGATTAAGC+CGG	+	tig0002300:17561-17580	Msa1338610:CDS	55.0%
!	ACCGGCTTAATCCTCTCTGC+CGG	-	tig0002300:17565-17584	None:intergenic	55.0%
	TTAAGCCGGTCGTCAAGTCG+CGG	+	tig0002300:17575-17594	Msa1338610:CDS	55.0%
	AGATGAGCCGCATCTACGCA+AGG	+	tig0002300:17666-17685	Msa1338610:CDS	55.0%
	GAACCGTCCTTGCGTAGATG+CGG	-	tig0002300:17676-17695	None:intergenic	55.0%
	GACAGTGAACTTCACGCGCT+TGG	+	tig0002300:17835-17854	Msa1338610:CDS	55.0%
	AGTGAACTTCACGCGCTTGG+TGG	+	tig0002300:17838-17857	Msa1338610:CDS	55.0%
	TTCAGCCGCGACTTGACGAC+CGG	-	tig0002300:17583-17602	None:intergenic	60.0%
	CCACCACCGGAAAAGATCGC+CGG	+	tig0002300:17643-17662	Msa1338610:CDS	60.0%
!	TCTCCGGCGATCTTTTCCGG+TGG	-	tig0002300:17649-17668	None:intergenic	60.0%
	GCGTAGATGCGGCTCATCTC+CGG	-	tig0002300:17665-17684	None:intergenic	60.0%
	GAGCCGCATCTACGCAAGGA+CGG	+	tig0002300:17670-17689	Msa1338610:CDS	60.0%
!	GAACTTCACGCGCTTGGTGG+TGG	+	tig0002300:17841-17860	Msa1338610:CDS	60.0%
!!	GCGCTTGGTGGTGGTACATC+TGG	+	tig0002300:17850-17869	Msa1338610:CDS	60.0%
!!	CAGAGGGTTTTGATCGGCGG+CGG	+	tig0002300:18644-18663	Msa1338610:CDS	60.0%
	GGTGAGTCTGGACAGAGTGG+TGG	+	tig0002300:18665-18684	Msa1338610:CDS	60.0%
	TTCAGCCGCGACTTGACGAC+CGG	-	tig0002300:17583-17602	None:intergenic	60.0%
	CCACCACCGGAAAAGATCGC+CGG	+	tig0002300:17643-17662	Msa1338610:CDS	60.0%
!	TCTCCGGCGATCTTTTCCGG+TGG	-	tig0002300:17649-17668	None:intergenic	60.0%
	GCGTAGATGCGGCTCATCTC+CGG	-	tig0002300:17665-17684	None:intergenic	60.0%
	GAGCCGCATCTACGCAAGGA+CGG	+	tig0002300:17670-17689	Msa1338610:CDS	60.0%
!	GAACTTCACGCGCTTGGTGG+TGG	+	tig0002300:17841-17860	Msa1338610:CDS	60.0%
!!	GCGCTTGGTGGTGGTACATC+TGG	+	tig0002300:17850-17869	Msa1338610:CDS	60.0%
!!	CAGAGGGTTTTGATCGGCGG+CGG	+	tig0002300:18644-18663	Msa1338610:CDS	60.0%
	GGTGAGTCTGGACAGAGTGG+TGG	+	tig0002300:18665-18684	Msa1338610:CDS	60.0%
	CGGTTGCGTGGCCGGAGAAA+TGG	-	tig0002300:17271-17290	None:intergenic	65.0%
!	CCGGCGATCTTTTCCGGTGG+TGG	-	tig0002300:17646-17665	None:intergenic	65.0%
	TTGATCGGCGGCGGTGAGTC+TGG	+	tig0002300:18653-18672	Msa1338610:CDS	65.0%
	GGCGGTGAGTCTGGACAGAG+TGG	+	tig0002300:18662-18681	Msa1338610:CDS	65.0%
	CGGTTGCGTGGCCGGAGAAA+TGG	-	tig0002300:17271-17290	None:intergenic	65.0%
!	CCGGCGATCTTTTCCGGTGG+TGG	-	tig0002300:17646-17665	None:intergenic	65.0%
	TTGATCGGCGGCGGTGAGTC+TGG	+	tig0002300:18653-18672	Msa1338610:CDS	65.0%
	GGCGGTGAGTCTGGACAGAG+TGG	+	tig0002300:18662-18681	Msa1338610:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0002300	gene	17161	19050	17161	ID=Msa1338610;Name=Msa1338610
tig0002300	mRNA	17161	19050	17161	ID=Msa1338610-mRNA-1;Parent=Msa1338610;Name=Msa1338610-mRNA-1;_AED=0.04;_eAED=0.04;_QI=359\|1\|1\|1\|1\|1\|3\|242\|357
tig0002300	exon	17161	17894	17161	ID=Msa1338610-mRNA-1:exon:1719;Parent=Msa1338610-mRNA-1
tig0002300	exon	18005	18200	18005	ID=Msa1338610-mRNA-1:exon:1720;Parent=Msa1338610-mRNA-1
tig0002300	exon	18306	19050	18306	ID=Msa1338610-mRNA-1:exon:1721;Parent=Msa1338610-mRNA-1
tig0002300	five_prime_UTR	17161	17519	17161	ID=Msa1338610-mRNA-1:five_prime_utr;Parent=Msa1338610-mRNA-1
tig0002300	CDS	17520	17894	17520	ID=Msa1338610-mRNA-1:cds;Parent=Msa1338610-mRNA-1
tig0002300	CDS	18005	18200	18005	ID=Msa1338610-mRNA-1:cds;Parent=Msa1338610-mRNA-1
tig0002300	CDS	18306	18808	18306	ID=Msa1338610-mRNA-1:cds;Parent=Msa1338610-mRNA-1
tig0002300	three_prime_UTR	18809	19050	18809	ID=Msa1338610-mRNA-1:three_prime_utr;Parent=Msa1338610-mRNA-1

Gene Sequence

>Msa1338610

ATGCCTTTCACAATGAAGATTCAGCCGATCGATTCTCAGATTCCGGCAGAGAGGATTAAGCCGGTCGTCAAGTCGCGGCTGAAGCGTCTTTTCGAGCGACAATTCTCCGGCGTTCTGAAGAATCCACCACCGGAAAAGATCGCCGGAGATGAGCCGCATCTACGCAAGGACGGTTCAAACAACGTCTTCATCGATTTTGAACCAAACTCAGTGTGTCTTGCGAAGATGGTGCAGAGTTTCATTGAAGAGAATCATGAGAAGCATTCAGTTTCATGTGCTCGTAACTGCTTCAACGGAAACTTCGACGATGGTTCCGACAGTGAACTTCACGCGCTTGGTGGTGGTACATCTGGTGAAGCCTATGAAATTCTTAAGGGTTTGGTGGCGTGTCCAAATGTTAATGAAAGAAACTTGTTAGCGGACACAACAAAGATCATTGAGAAGAACAAAACTGTGTGCAAACGTAAAGATGATAATTGCAGAAAAATTGTTATTGATGGATTGTTGAATCTTGGATATGATGCTTCAATTTGTAAATCTCGCTGGGAAAAATCCACTTTCTGTATAGCAGGTGAATATGAATACATTGATGTGGTAATAGGAAAGGAGAGGGTGATAATTGATGTTGATTTCAGATCAGAATTTGAGATTGCTCGATCAACCAAAGCTTACAAAGTGATTCTCCAAACGCTTCCTTATGTATTCGTAGGGAAGAGTGATCGGTTACATAGTATTGTAGCCATAGCATCTGAGGCAGCGAAACAGAGTTTGAAGAAAAAGGGTTTGCATGTTCCACCTTGGAGAAAACTCGAATACGTTAGATCAAAATGGTTCTCTCCTTACACAAGAATTACACCACCTATGTTTTGTCCTTGGTCACGTGAAATCAGTGAGGAAACAGAGAGAAAACAGAGGGTTTTGATCGGCGGCGGTGAGTCTGGACAGAGTGGTGGTGAGTCAGAGTCAAAAGTGGTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAACTCTGTTCAGACTGGGGTTAAGGTTGTGACTGGTTTGGCAGCTGTTTTTCGTGAAAACCCATGA

Protein sequence

>Msa1338610

MPFTMKIQPIDSQIPAERIKPVVKSRLKRLFERQFSGVLKNPPPEKIAGDEPHLRKDGSNNVFIDFEPNSVCLAKMVQSFIEENHEKHSVSCARNCFNGNFDDGSDSELHALGGGTSGEAYEILKGLVACPNVNERNLLADTTKIIEKNKTVCKRKDDNCRKIVIDGLLNLGYDASICKSRWEKSTFCIAGEYEYIDVVIGKERVIIDVDFRSEFEIARSTKAYKVILQTLPYVFVGKSDRLHSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWFSPYTRITPPMFCPWSREISEETERKQRVLIGGGESGQSGGESESKVVVEWKPPELKPKNSVQTGVKVVTGLAAVFRENP*