AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0901090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901090 MtrunA17_Chr6g0487171 99.252 535 4 0 26 560 1 535 0.0 1116
Msa0901090 MtrunA17_Chr6g0487171 88.830 564 20 1 564 1084 973 1536 0.0 1014
Msa0901090 MtrunA17_Chr1g0197721 24.675 231 154 4 54 277 53 270 1.21e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0901090 AT4G29380.1 69.346 535 119 3 26 560 1 490 0.0 769
Msa0901090 AT4G29380.1 64.602 565 151 4 567 1084 932 1494 0.0 698
Msa0901090 AT4G29380.2 64.602 565 151 4 567 1084 711 1273 0.0 699
Msa0901090 AT4G29380.2 56.369 314 92 3 247 560 1 269 4.82e-103 353
Msa0901090 AT1G33770.1 28.638 213 121 10 58 261 147 337 1.75e-12 72.0
Msa0901090 AT5G04510.2 22.932 266 180 6 23 277 12 263 9.88e-12 68.9
Msa0901090 AT5G04510.1 22.932 266 180 6 23 277 12 263 1.14e-11 68.9
Msa0901090 AT3G10540.1 21.978 273 189 5 16 277 5 264 3.16e-11 67.8
Msa0901090 AT5G04510.3 22.932 266 180 6 23 277 12 263 3.52e-11 66.2

Find 349 sgRNAs with CRISPR-Local

Find 658 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACATTCTTCTCTTAATT+TGG 0.041837 6_1:+97345598 Msa0901090:three_prime_UTR
CGTCATTTCCAACTCCTTTA+AGG 0.073845 6_1:-97345002 None:intergenic
TCTTAATAAGTCCTCATTTA+TGG 0.099801 6_1:+97347550 Msa0901090:three_prime_UTR
TGATGATTTCACACTGTATT+TGG 0.143956 6_1:+97345750 Msa0901090:three_prime_UTR
CTTTCCCAATTTCAACAAAA+AGG 0.170555 6_1:-97346073 None:intergenic
TATCCATGGGGCAATTTAAA+AGG 0.198468 6_1:-97343986 None:intergenic
CATGAAACTCGCGCTTTCTT+TGG 0.217749 6_1:-97342665 None:intergenic
CCTTAGCAAGTCCTTTAATT+TGG 0.221081 6_1:+97343341 Msa0901090:CDS
AACTGAATTGGCCAAATTAA+AGG 0.221582 6_1:-97343352 None:intergenic
TTCTGCATCACTGTCATAAT+TGG 0.226064 6_1:-97344658 None:intergenic
TGTTCCAACTGGTTTGTATC+AGG 0.226968 6_1:+97344137 Msa0901090:CDS
TGCATCACCAAAGCTATTTC+AGG 0.234965 6_1:+97343374 Msa0901090:CDS
AAACATTCTTCTCTTAATTT+GGG 0.236627 6_1:+97345599 Msa0901090:three_prime_UTR
CTATATTTCCCTCCTACTTT+TGG 0.238837 6_1:-97347345 None:intergenic
ATTTGTGGACCAAACCTTAA+AGG 0.257317 6_1:+97344988 Msa0901090:CDS
AGAACTGTGGCATTCATCTA+TGG 0.268978 6_1:+97344033 Msa0901090:CDS
GCCAAGTATGGCACCTTCTT+TGG 0.270656 6_1:-97343964 None:intergenic
TTAGCTTGGTTGTTTGGATT+TGG 0.274247 6_1:+97347467 Msa0901090:three_prime_UTR
CATGATCAGTATGAACTTCT+TGG 0.274313 6_1:+97342730 Msa0901090:CDS
CTAGTTCTGAAAGAAGTTCT+TGG 0.275217 6_1:+97337906 Msa0901090:CDS
CTTTCCATTATTTATTGAAT+TGG 0.276525 6_1:+97346412 Msa0901090:three_prime_UTR
TGTGACCTCTGGAGAACTTT+TGG 0.276856 6_1:+97342630 Msa0901090:CDS
CGCGGCCTCCAACCAGAATC+AGG 0.280826 6_1:-97343603 None:intergenic
ACTATGCCAGAGTGCTTTCC+AGG 0.282997 6_1:+97342561 Msa0901090:CDS
ACGGAGGATTTCGATGATTA+AGG 0.283282 6_1:+97338034 Msa0901090:CDS
CGGACATCCATCCCTGATTC+TGG 0.284166 6_1:+97343591 Msa0901090:CDS
ACAAAATAGTTAGTGAAATA+TGG 0.285005 6_1:-97346673 None:intergenic
CGAGGTCAAATTCCAATTCT+TGG 0.285843 6_1:+97344060 Msa0901090:CDS
TGCAAAACTTGTCTTGGCTT+TGG 0.288384 6_1:-97346864 None:intergenic
TGCTAATTACGTCCTCAAAT+TGG 0.288641 6_1:+97340829 Msa0901090:CDS
GATCTTCATCATCAATATAT+AGG 0.292293 6_1:-97343143 None:intergenic
ATGACTTGACAGTCAAGATT+TGG 0.302394 6_1:+97343718 Msa0901090:CDS
TTCATCTAAACTTAAAATTC+AGG 0.304644 6_1:+97347020 Msa0901090:three_prime_UTR
ACTACCCAAGCTGATTTATC+AGG 0.317965 6_1:+97343552 Msa0901090:CDS
TGGAAAAGTTATCAGCCTTT+TGG 0.319494 6_1:+97346235 Msa0901090:three_prime_UTR
CGCACACTGCTTCCCTTGCC+AGG 0.326842 6_1:+97344813 Msa0901090:CDS
TATGAAACAAAATCTAGTTT+TGG 0.329273 6_1:+97345030 Msa0901090:CDS
AGAACTAGATTATACGTTGA+TGG 0.332572 6_1:-97337891 None:intergenic
GTTGTCTTGGCTGTCTGCTT+TGG 0.334965 6_1:-97347315 None:intergenic
AAGAATTTAGCTTGGTTGTT+TGG 0.335230 6_1:+97347461 Msa0901090:three_prime_UTR
TCCATTACAAATGAATTCTC+TGG 0.337807 6_1:+97343284 Msa0901090:CDS
GAATACTTCCAAGAGTTTAC+AGG 0.338191 6_1:-97344206 None:intergenic
GAACCTCCTCCGCGTCTTCC+TGG 0.338704 6_1:+97344786 Msa0901090:CDS
GTGCACAATAATTGAGAGTT+TGG 0.339020 6_1:+97346269 Msa0901090:three_prime_UTR
TTTGTTCCCCATCGCGATTA+TGG 0.342781 6_1:-97337817 None:intergenic
CGGCGATTCTATTAATCTTT+CGG 0.343644 6_1:+97338004 Msa0901090:CDS
TTCCCCTCTAAAGCCATCTA+TGG 0.343803 6_1:+97341630 Msa0901090:CDS
AATTTACTTCCAAACCTTGA+TGG 0.344298 6_1:-97345445 None:intergenic
TTTCCAACTCCTTTAAGGTT+TGG 0.344323 6_1:-97344997 None:intergenic
TAAATTACTAAAGTTCATTT+CGG 0.344323 6_1:+97345462 Msa0901090:exon
GTTGCAATGAAGTTTCTCTT+TGG 0.345255 6_1:+97344324 Msa0901090:CDS
TGAACTTTCAGAAGGCATTA+AGG 0.348586 6_1:-97347507 None:intergenic
GCAATTTAAAAGGCCAAGTA+TGG 0.350443 6_1:-97343976 None:intergenic
TAGTCCAATTCAATAAATAA+TGG 0.352135 6_1:-97346416 None:intergenic
CTTTGTTATCTGATCTTGAT+TGG 0.356370 6_1:-97346121 None:intergenic
CTGTACATAAAGTAAGTTAT+TGG 0.359625 6_1:+97345526 Msa0901090:three_prime_UTR
TACGTCGATGGGATCATTAC+AGG 0.359928 6_1:+97344871 Msa0901090:CDS
TGAGCAATCAGTTCAAGAAT+TGG 0.360727 6_1:-97345577 None:intergenic
TCCTATTGAATGTGATTGAT+TGG 0.362282 6_1:+97346215 Msa0901090:three_prime_UTR
ATCTTGCGGATTCCAATATC+TGG 0.363639 6_1:-97342282 None:intergenic
TGAAGGTTTGGTTCTTGTTA+AGG 0.365416 6_1:+97337968 Msa0901090:CDS
ATGAACACAGATTTGCTATA+AGG 0.371473 6_1:+97346560 Msa0901090:three_prime_UTR
GTCCGATATGCCTTGGGCCT+TGG 0.372385 6_1:+97344683 Msa0901090:CDS
TCCAATCAATCACATTCAAT+AGG 0.372386 6_1:-97346216 None:intergenic
CGGAAGAAGACTCTGTTATC+TGG 0.378830 6_1:+97340938 Msa0901090:CDS
GACAAAAGCTACTGCATTTG+TGG 0.380454 6_1:+97344973 Msa0901090:CDS
CACTTGAGAGTAGGAGTCTC+TGG 0.383367 6_1:-97345410 None:intergenic
CAAAGAAAGCGCGAGTTTCA+TGG 0.387216 6_1:+97342666 Msa0901090:CDS
AATGTTGTTGAGAAGTATTC+CGG 0.391119 6_1:+97343915 Msa0901090:CDS
TTATGTGTAGCGATGCTTCC+AGG 0.391948 6_1:+97343813 Msa0901090:CDS
ATAGATGAATGCCACAGTTC+TGG 0.392359 6_1:-97344031 None:intergenic
TGACTTGACAGTCAAGATTT+GGG 0.392569 6_1:+97343719 Msa0901090:CDS
CTATGGATTTATTTGCTGTT+GGG 0.393028 6_1:+97341647 Msa0901090:CDS
CCCAGAGAATTCATTTGTAA+TGG 0.394515 6_1:-97343285 None:intergenic
TAGGGGTGTAATTACACTTT+GGG 0.395655 6_1:+97344166 Msa0901090:CDS
ATCTTCATCATCAATATATA+GGG 0.396562 6_1:-97343142 None:intergenic
TTGTGAGATGTCAAAAGATT+GGG 0.397458 6_1:-97346733 None:intergenic
CATCAGGGCCTTGTTCCAAC+TGG 0.399695 6_1:+97344126 Msa0901090:CDS
GTGTTGTGTATAATAACAAT+AGG 0.405179 6_1:+97347435 Msa0901090:three_prime_UTR
TGACTGCGGAACGGAGCTCC+TGG 0.406194 6_1:-97343647 None:intergenic
TTAGTTTCGTTGAGAAGAAA+TGG 0.408112 6_1:+97340443 Msa0901090:CDS
GATCATATTTCTAGAGGTCT+AGG 0.408333 6_1:+97343891 Msa0901090:CDS
ATATTACTATTTAATCCAAC+AGG 0.409794 6_1:+97346930 Msa0901090:three_prime_UTR
TTCTGCTGAAATGTATCTAA+AGG 0.412239 6_1:+97342344 Msa0901090:CDS
TTGGAGGCCGCGTGGGGTGT+TGG 0.413868 6_1:+97343614 Msa0901090:CDS
TGAAAGTGAGGCTGAAATAT+TGG 0.414094 6_1:+97347209 Msa0901090:three_prime_UTR
TTAGTTCATCTGCAATGCCT+TGG 0.415107 6_1:+97343310 Msa0901090:CDS
TCTATGGATTTATTTGCTGT+TGG 0.415411 6_1:+97341646 Msa0901090:CDS
GTTGAAGACAGAGAAGCATT+TGG 0.416553 6_1:-97344272 None:intergenic
GTCCTCTCCATTCCGATATG+AGG 0.419892 6_1:+97342433 Msa0901090:CDS
GTGTGCATTTGAAAGATGTT+CGG 0.420313 6_1:-97337738 None:intergenic
GCTGGTCCTCAGCAAGGAAT+AGG 0.420817 6_1:+97342802 Msa0901090:CDS
AGCATTTGCAAAACTTGTCT+TGG 0.421888 6_1:-97346870 None:intergenic
TAGTTCATCTGCAATGCCTT+GGG 0.422255 6_1:+97343311 Msa0901090:CDS
GATAGTCAGTCGGATACATT+TGG 0.423026 6_1:+97342979 Msa0901090:CDS
TGCAGCTGCTGCCACTGATT+CGG 0.426104 6_1:+97345338 Msa0901090:CDS
GGTGTTGGTTGCACTCCTCC+AGG 0.428201 6_1:+97343629 Msa0901090:CDS
TTCACACTGTATTTGGAGAA+AGG 0.431914 6_1:+97345757 Msa0901090:three_prime_UTR
AAAAGAACCTGAAATAGCTT+TGG 0.432467 6_1:-97343381 None:intergenic
GTGTGTGTGCGCGCATAAAT+AGG 0.432921 6_1:-97345701 None:intergenic
TACGCCTTATCCCTAGCATC+AGG 0.433910 6_1:+97344110 Msa0901090:CDS
TTCTTGAACCTGTAAACTCT+TGG 0.434178 6_1:+97344198 Msa0901090:CDS
ACAGCAAATAAATCCATAGA+TGG 0.435795 6_1:-97341643 None:intergenic
TGGACTAACGACTGGATTTG+AGG 0.436664 6_1:+97346432 Msa0901090:three_prime_UTR
TGTAGCGATGCTTCCAGGTT+CGG 0.436946 6_1:+97343818 Msa0901090:CDS
TAGATGAATGCCACAGTTCT+GGG 0.437167 6_1:-97344030 None:intergenic
TCATTTGTTTAAGTATCTCC+TGG 0.437177 6_1:-97342579 None:intergenic
CTTTGGTGATGCAACTGAAT+TGG 0.437321 6_1:-97343364 None:intergenic
AAATCCATAGATGGCTTTAG+AGG 0.437513 6_1:-97341634 None:intergenic
TGAAAAGTTGGCTTACTTGA+AGG 0.439059 6_1:-97344711 None:intergenic
ACCAAAGAAGGTGCCATACT+TGG 0.439437 6_1:+97343963 Msa0901090:CDS
GTATTGATCATCCTCATGTT+TGG 0.439994 6_1:+97338069 Msa0901090:CDS
TGGAGCTTTAGCAGTTGTCT+TGG 0.441630 6_1:-97347295 None:intergenic
GCAGCTGCAAGAATTGCCTT+TGG 0.444314 6_1:-97345324 None:intergenic
GCCCCTTGTTTATGTGGCCG+CGG 0.444388 6_1:+97344301 Msa0901090:CDS
GTTTGTATCAGGGTCGTCTA+GGG 0.445464 6_1:+97344148 Msa0901090:CDS
CATAATGCTATTATTATCCA+TGG 0.445946 6_1:-97344000 None:intergenic
CTTGGATCTGACTGAAAAGT+TGG 0.448987 6_1:-97344723 None:intergenic
GGCAGCTGTACTCTTGTTGA+AGG 0.449481 6_1:+97343113 Msa0901090:CDS
ATCCGACTGACTATCATATT+CGG 0.451086 6_1:-97342971 None:intergenic
GTGTAAACACGATGAAGGTT+TGG 0.451836 6_1:+97337956 Msa0901090:CDS
CACTAGGCCCCTTGTTTATG+TGG 0.453443 6_1:+97344295 Msa0901090:CDS
CCCCTTGTTTATGTGGCCGC+GGG 0.454578 6_1:+97344302 Msa0901090:CDS
GGTTTGTATCAGGGTCGTCT+AGG 0.455450 6_1:+97344147 Msa0901090:CDS
ATTCCTTGCTGAGGACCAGC+TGG 0.455754 6_1:-97342799 None:intergenic
TGGAACAAGGCCCTGATGCT+AGG 0.457115 6_1:-97344121 None:intergenic
GATAGTTGTCAAACTTGTGC+TGG 0.457245 6_1:-97346823 None:intergenic
TGAAAATGGAGGGGAGATGC+AGG 0.459107 6_1:+97341597 Msa0901090:CDS
CCAAATTAAAGGACTTGCTA+AGG 0.460200 6_1:-97343341 None:intergenic
TCCACACTAAAGGAGTATAA+TGG 0.462508 6_1:-97343222 None:intergenic
GATTTGGGATTCCAGAAAGC+TGG 0.463054 6_1:+97343734 Msa0901090:CDS
AGAGTACAGCTGCCCTCCTT+AGG 0.463977 6_1:-97343104 None:intergenic
CAGAAATGTCCGATATGCCT+TGG 0.464220 6_1:+97344676 Msa0901090:CDS
TTAGTCGATCATGCAAATTA+TGG 0.464265 6_1:-97340405 None:intergenic
AATCCAACAGGATTTCGAAC+TGG 0.465448 6_1:+97346942 Msa0901090:three_prime_UTR
TACTCTCAAGTGGTAGAGAT+GGG 0.467344 6_1:+97345421 Msa0901090:CDS
CTCTGTGATATCAGCAATAC+CGG 0.467568 6_1:-97343934 None:intergenic
GAGATGGGGCCATCAAGGTT+TGG 0.469428 6_1:+97345436 Msa0901090:CDS
TCCTCTTCTGTCCACACTAA+AGG 0.470464 6_1:-97343232 None:intergenic
ATCCTTTCGTAATGGTAGAA+AGG 0.470869 6_1:-97343007 None:intergenic
ACTATCACTTGTGCCGAACC+TGG 0.471229 6_1:-97343831 None:intergenic
CTTGTGAGATGTCAAAAGAT+TGG 0.471233 6_1:-97346734 None:intergenic
AGTGAAATCCAAACCTGAAA+AGG 0.471576 6_1:-97338092 None:intergenic
GTTCCAACTGGTTTGTATCA+GGG 0.473177 6_1:+97344138 Msa0901090:CDS
TCCTTTCGTAATGGTAGAAA+GGG 0.473421 6_1:-97343006 None:intergenic
GGAAGCAGTGTGCGAATACC+AGG 0.473724 6_1:-97344804 None:intergenic
GCACACTGCTTCCCTTGCCA+GGG 0.473960 6_1:+97344814 Msa0901090:CDS
CAACTTGACATTGCGTATGC+AGG 0.475429 6_1:-97343076 None:intergenic
TTGGTGCAGATACCAGATAT+TGG 0.480102 6_1:+97342270 Msa0901090:intron
CAAATAGTGGTTGGCCCTCA+AGG 0.480696 6_1:-97342075 None:intergenic
GCAGGACTTATTATGTGTCT+TGG 0.481687 6_1:-97347407 None:intergenic
ATTCTGGTTGGAGGCCGCGT+GGG 0.484034 6_1:+97343607 Msa0901090:CDS
TCTGTTGATCATATTTCTAG+AGG 0.484512 6_1:+97343885 Msa0901090:CDS
AGTTGAGACAGTTCAAATAG+TGG 0.485552 6_1:-97342088 None:intergenic
AATAATAATAAGAGTCCAGC+TGG 0.485791 6_1:+97342784 Msa0901090:CDS
TCATCGTTGAAATCACCAAC+AGG 0.487237 6_1:-97345650 None:intergenic
GGACCAAACCTTAAAGGAGT+TGG 0.492186 6_1:+97344994 Msa0901090:CDS
TACCTTCTGATGGCTTGTAA+TGG 0.492230 6_1:-97343197 None:intergenic
TTTAAGTTTAGATGAAGTGT+TGG 0.493518 6_1:-97347013 None:intergenic
AAATTGGGAAAGCACACATT+CGG 0.494679 6_1:+97346084 Msa0901090:three_prime_UTR
ATCAGTTCAAGAATTGGAAA+AGG 0.495220 6_1:-97345571 None:intergenic
TTAAGTTTAGATGAAGTGTT+GGG 0.496786 6_1:-97347012 None:intergenic
TATTGAATTGGACTAACGAC+TGG 0.496878 6_1:+97346424 Msa0901090:three_prime_UTR
AACATTCTTCTCTTAATTTG+GGG 0.496969 6_1:+97345600 Msa0901090:three_prime_UTR
AATAAGTCCTCATTTATGGA+TGG 0.497489 6_1:+97347554 Msa0901090:three_prime_UTR
AGGCCCTGATGCTAGGGATA+AGG 0.499741 6_1:-97344114 None:intergenic
AAATCCTGATAAATCAGCTT+GGG 0.501210 6_1:-97343556 None:intergenic
CGGGGCTAAGCGGTAAGAAT+CGG 0.501758 6_1:-97346783 None:intergenic
CCATCCCTGATTCTGGTTGG+AGG 0.508548 6_1:+97343598 Msa0901090:CDS
ATAAGTCCTCATTTATGGAT+GGG 0.510112 6_1:+97347555 Msa0901090:three_prime_UTR
TTCTCAACGAAACTAAGAAA+AGG 0.512248 6_1:-97340436 None:intergenic
GATGATGCAGGTGTGACCTC+TGG 0.513874 6_1:+97342619 Msa0901090:CDS
CTAGGGGTGTAATTACACTT+TGG 0.516529 6_1:+97344165 Msa0901090:CDS
ATAACGCATGGCTTCCCTCC+AGG 0.518260 6_1:-97343794 None:intergenic
GATTATGGATCGATTATTTG+TGG 0.519587 6_1:-97337802 None:intergenic
TCAAGATCAGATAACAAAGT+AGG 0.519703 6_1:+97346125 Msa0901090:three_prime_UTR
AGTGTGGACAGAAGAGGAAT+GGG 0.519978 6_1:+97343237 Msa0901090:CDS
TTGCCAGTTCGAAATCCTGT+TGG 0.520609 6_1:-97346945 None:intergenic
GTACAGTTCTACTAGCTACT+AGG 0.520873 6_1:-97345509 None:intergenic
TTGCGGTTAACATTTCGTCT+TGG 0.521001 6_1:-97344741 None:intergenic
GACAGAGAAGCATTTGGAGG+AGG 0.521628 6_1:-97344266 None:intergenic
ACTTATTAAGATAGATGCTA+AGG 0.521910 6_1:-97347538 None:intergenic
CCATTACAAATGAATTCTCT+GGG 0.522039 6_1:+97343285 Msa0901090:CDS
ACTATATCGAATGCATTTCG+AGG 0.523879 6_1:+97342892 Msa0901090:CDS
TCATGATTCTATTGTGTCTG+TGG 0.524816 6_1:+97345371 Msa0901090:CDS
TAGTGTGGACAGAAGAGGAA+TGG 0.525987 6_1:+97343236 Msa0901090:CDS
GAAATCCTGATAAATCAGCT+TGG 0.526887 6_1:-97343557 None:intergenic
AATCCATAGATGGCTTTAGA+GGG 0.527148 6_1:-97341633 None:intergenic
TCAGCAGAAAATCGAGACTC+TGG 0.527413 6_1:-97342330 None:intergenic
GGTTCGGCACAAGTGATAGT+TGG 0.527635 6_1:+97343834 Msa0901090:CDS
AAACACATATACCCTCATAT+CGG 0.527866 6_1:-97342445 None:intergenic
AGCCAAGGCCCAAGGCATAT+CGG 0.527916 6_1:-97344685 None:intergenic
TTGTAATGGAGAATCACATA+TGG 0.528387 6_1:-97343183 None:intergenic
GTGATAGTTGGAGCATCTGA+TGG 0.528648 6_1:+97343846 Msa0901090:CDS
CTACTCTCAAGTGGTAGAGA+TGG 0.531681 6_1:+97345420 Msa0901090:CDS
AACCCGCGGCCACATAAACA+AGG 0.532615 6_1:-97344304 None:intergenic
ATTCAGTGTAAACACGATGA+AGG 0.532721 6_1:+97337951 Msa0901090:CDS
GAAACTAAAATTGTGAAACT+AGG 0.533575 6_1:-97346903 None:intergenic
AGAAATGTCCGATATGCCTT+GGG 0.533977 6_1:+97344677 Msa0901090:CDS
ATAGTTTGAAGCAGCTCACC+AGG 0.534125 6_1:-97342874 None:intergenic
AATCGATCCATAATCGCGAT+GGG 0.534174 6_1:+97337810 Msa0901090:CDS
GAGAGCAACAATACAATCAA+AGG 0.535710 6_1:-97347592 None:intergenic
ATAGTTGTCAAACTTGTGCT+GGG 0.535948 6_1:-97346822 None:intergenic
GCACAATGACTTAAACCAAA+AGG 0.536469 6_1:-97346250 None:intergenic
TAAGTCCTCATTTATGGATG+GGG 0.537206 6_1:+97347556 Msa0901090:three_prime_UTR
AGAGGTCACACCTGCATCAT+CGG 0.537985 6_1:-97342617 None:intergenic
CTCATAGTATCCTTTCGTAA+TGG 0.538283 6_1:-97343015 None:intergenic
TGGTAGAGATGGGGCCATCA+AGG 0.539125 6_1:+97345431 Msa0901090:CDS
GTAAGTTGTATCATAGCAAA+GGG 0.539582 6_1:+97346387 Msa0901090:three_prime_UTR
CACACTGCTTCCCTTGCCAG+GGG 0.541161 6_1:+97344815 Msa0901090:CDS
AATTGCCTTTGGTGTCAGCT+TGG 0.543834 6_1:-97345313 None:intergenic
GGTGTCAGCTTGGTTGCAAG+AGG 0.543856 6_1:-97345303 None:intergenic
AACTTCTTGCGTATCGCAGA+GGG 0.544928 6_1:+97342107 Msa0901090:CDS
ATGTCAAGTTGCCTCACCTA+AGG 0.545488 6_1:+97343088 Msa0901090:CDS
GAAGACAGAGAAGCATTTGG+AGG 0.546432 6_1:-97344269 None:intergenic
CAAATTAAAGGACTTGCTAA+GGG 0.546462 6_1:-97343340 None:intergenic
ACAACTGAAGTTCCAAAAGT+AGG 0.546763 6_1:+97347333 Msa0901090:three_prime_UTR
TCAAGTTGCCTCACCTAAGG+AGG 0.546995 6_1:+97343091 Msa0901090:CDS
ATAGGTTTAAGAATTTAGCT+TGG 0.548250 6_1:+97347453 Msa0901090:three_prime_UTR
TTCTGGTTGGAGGCCGCGTG+GGG 0.549790 6_1:+97343608 Msa0901090:CDS
CTGAAAGAAGTTCTTGGACG+CGG 0.550940 6_1:+97337912 Msa0901090:CDS
ATCGTCATACGGTATGTATG+TGG 0.552186 6_1:-97340883 None:intergenic
ATAATGCTATTATTATCCAT+GGG 0.555144 6_1:-97343999 None:intergenic
CCAACAGGAGACTTTGAAGA+AGG 0.555603 6_1:+97347167 Msa0901090:intron
GAACTGTGGCATTCATCTAT+GGG 0.556819 6_1:+97344034 Msa0901090:CDS
GGAACAAGGCCCTGATGCTA+GGG 0.557747 6_1:-97344120 None:intergenic
GCTCATCAACTCTGTACTTG+CGG 0.559743 6_1:-97344758 None:intergenic
CTTCTCTGTCTTCAACCACT+AGG 0.560663 6_1:+97344279 Msa0901090:CDS
AAACAGTCATCCGATGATGC+AGG 0.561024 6_1:+97342607 Msa0901090:CDS
TAATCGATCCATAATCGCGA+TGG 0.561127 6_1:+97337809 Msa0901090:CDS
GCATTTCCTATTCCTTGCTG+AGG 0.562118 6_1:-97342808 None:intergenic
CATCCATCCCTGATTCTGGT+TGG 0.562681 6_1:+97343595 Msa0901090:CDS
TTTCGTTGAGAAGAAATGGT+TGG 0.563110 6_1:+97340447 Msa0901090:CDS
GTATCTCCTGGAAAGCACTC+TGG 0.566816 6_1:-97342567 None:intergenic
TTAATCTTTCGGAGTATGAA+CGG 0.567893 6_1:+97338015 Msa0901090:CDS
TGCAACCAAGCTGACACCAA+AGG 0.569821 6_1:+97345308 Msa0901090:CDS
ACCCTTTCTACCATTACGAA+AGG 0.570009 6_1:+97343005 Msa0901090:CDS
ACTGAAGTTCCAAAAGTAGG+AGG 0.570317 6_1:+97347336 Msa0901090:three_prime_UTR
GCGGCCTCCAACCAGAATCA+GGG 0.570794 6_1:-97343602 None:intergenic
TACTATGAGATGTGAAGGCA+TGG 0.570884 6_1:+97343029 Msa0901090:CDS
TTATACACAACACAGTCTGC+AGG 0.570971 6_1:-97347425 None:intergenic
ATACCAGGAAGACGCGGAGG+AGG 0.572475 6_1:-97344789 None:intergenic
GAGACAGTTCAAATAGTGGT+TGG 0.573964 6_1:-97342084 None:intergenic
TGATTTCATTGCTGAAAGTG+AGG 0.575632 6_1:+97347197 Msa0901090:three_prime_UTR
CTCCATTACAAGCCATCAGA+AGG 0.577130 6_1:+97343195 Msa0901090:CDS
TCCTCTCCATTCCGATATGA+GGG 0.578708 6_1:+97342434 Msa0901090:CDS
CATCTCTACCACTTGAGAGT+AGG 0.580766 6_1:-97345419 None:intergenic
GTAAAACAGAGCCACGAGAA+GGG 0.581547 6_1:+97340607 Msa0901090:CDS
AGAGAATGCTAGCTGCCACC+AGG 0.581685 6_1:+97344352 Msa0901090:CDS
TGTAAAACAGAGCCACGAGA+AGG 0.582971 6_1:+97340606 Msa0901090:CDS
GAGAAGCATTTGGAGGAGGA+AGG 0.583269 6_1:-97344262 None:intergenic
TGTAAGTTGTATCATAGCAA+AGG 0.585409 6_1:+97346386 Msa0901090:three_prime_UTR
CGACCCTGATACAAACCAGT+TGG 0.587679 6_1:-97344141 None:intergenic
ACATTCTTCTCTTAATTTGG+GGG 0.587877 6_1:+97345601 Msa0901090:three_prime_UTR
GTACATATTGAACTTTCAGA+AGG 0.587997 6_1:-97347515 None:intergenic
CTTACTTGAAGGTTTAGCCA+AGG 0.588715 6_1:-97344700 None:intergenic
AATGGAGAATCAGAAGCTGC+AGG 0.590111 6_1:-97343267 None:intergenic
GTAGGAGGGAAATATAGTGT+TGG 0.590188 6_1:+97347351 Msa0901090:three_prime_UTR
AAATCAGATGGATCGTCATA+CGG 0.592053 6_1:-97340894 None:intergenic
GGATAAGGCGTAGCCCTCGT+GGG 0.594180 6_1:-97344099 None:intergenic
ACAGAGAAGGATACCAAAGA+AGG 0.595280 6_1:+97343951 Msa0901090:CDS
GTCAAAGCTAACTTATCACC+TGG 0.595835 6_1:+97343776 Msa0901090:CDS
GATTCTGGTTGGAGGCCGCG+TGG 0.597894 6_1:+97343606 Msa0901090:CDS
AAGGATACTATGAGATGTGA+AGG 0.598725 6_1:+97343024 Msa0901090:CDS
TATAATGGTATACCTTCTGA+TGG 0.599706 6_1:-97343207 None:intergenic
CAGACACAATAGAATCATGA+TGG 0.601289 6_1:-97345368 None:intergenic
ACCATTATACTCCTTTAGTG+TGG 0.601493 6_1:+97343221 Msa0901090:CDS
CTGATTTAAAGATACGTCGA+TGG 0.601956 6_1:+97344859 Msa0901090:CDS
TGAAATCACGTTTCTAACTG+AGG 0.602109 6_1:+97337496 Msa0901090:five_prime_UTR
GTGATATTAATAGCTTACTG+AGG 0.602685 6_1:+97342752 Msa0901090:CDS
GGGATAAGGCGTAGCCCTCG+TGG 0.602724 6_1:-97344100 None:intergenic
AGCAAGGTAAAGCCAATTTG+AGG 0.602848 6_1:-97340841 None:intergenic
TCGTCATACGGTATGTATGT+GGG 0.605383 6_1:-97340882 None:intergenic
ACACTCCCCATCCATAAATG+AGG 0.607755 6_1:-97347561 None:intergenic
ACGTTGATGGTAACTCGTGT+AGG 0.607943 6_1:-97337878 None:intergenic
TATTGCTGATATCACAGAGA+AGG 0.608681 6_1:+97343938 Msa0901090:CDS
CATATACCCTCATATCGGAA+TGG 0.608942 6_1:-97342440 None:intergenic
TCCTTTAGTGTGGACAGAAG+AGG 0.609781 6_1:+97343231 Msa0901090:CDS
GAAGGTTTAGCCAAGGCCCA+AGG 0.610384 6_1:-97344693 None:intergenic
TTGCGTGATACGGGGCTAAG+CGG 0.611457 6_1:-97346793 None:intergenic
CAGAGACTCCTACTCTCAAG+TGG 0.611500 6_1:+97345411 Msa0901090:CDS
CACGAGAAGGGAGTTTGTCA+TGG 0.611540 6_1:+97340619 Msa0901090:CDS
CACATAAACAAGGGGCCTAG+TGG 0.612775 6_1:-97344294 None:intergenic
ACCTGAAAAGGCCAAACATG+AGG 0.613181 6_1:-97338080 None:intergenic
AAATTGCATATTGATCCTGT+TGG 0.613743 6_1:+97345635 Msa0901090:three_prime_UTR
GATACAAACCAGTTGGAACA+AGG 0.614163 6_1:-97344134 None:intergenic
CGAAGGAAAAGAGAGGACAT+AGG 0.614178 6_1:+97342694 Msa0901090:CDS
TGATATTAATAGCTTACTGA+GGG 0.614256 6_1:+97342753 Msa0901090:CDS
AAAAGAGAGGACATAGGCAA+AGG 0.617802 6_1:+97342700 Msa0901090:CDS
ATGGCAACTTGCCGAATCAG+TGG 0.618602 6_1:-97345349 None:intergenic
ACAATATAACTTTCATTACG+TGG 0.619460 6_1:-97346630 None:intergenic
CCCGCGGCCACATAAACAAG+GGG 0.619959 6_1:-97344302 None:intergenic
CTGAAGTTCCAAAAGTAGGA+GGG 0.620711 6_1:+97347337 Msa0901090:three_prime_UTR
AGTCCAGCTGGTCCTCAGCA+AGG 0.620870 6_1:+97342796 Msa0901090:CDS
TGAAAGATGCAAAGTCAGCA+AGG 0.621874 6_1:-97340857 None:intergenic
CTTATTAAGATAGATGCTAA+GGG 0.624301 6_1:-97347537 None:intergenic
GTCATTCGATCAACATCAGA+TGG 0.624676 6_1:-97346161 None:intergenic
CTCTTCCAAAAGTTCTCCAG+AGG 0.624820 6_1:-97342635 None:intergenic
TGATTTAAAGATACGTCGAT+GGG 0.625024 6_1:+97344860 Msa0901090:CDS
CTGTGTCACTGACTGCGGAA+CGG 0.625357 6_1:-97343656 None:intergenic
TGAAATCGACAAGATGAACA+TGG 0.627431 6_1:-97346027 None:intergenic
CCTCCAACCAGAATCAGGGA+TGG 0.628137 6_1:-97343598 None:intergenic
CTGCGGAACGGAGCTCCTGG+AGG 0.632540 6_1:-97343644 None:intergenic
ACTCTGTTATCTGGCACCTG+AGG 0.633407 6_1:+97340947 Msa0901090:CDS
ATGTATCTAAAGGAATACGC+TGG 0.633667 6_1:+97342354 Msa0901090:CDS
ACCCGCGGCCACATAAACAA+GGG 0.636814 6_1:-97344303 None:intergenic
AAATTAAAGGACTTGCTAAG+GGG 0.637433 6_1:-97343339 None:intergenic
GTCCGAATATGATAGTCAGT+CGG 0.639328 6_1:+97342969 Msa0901090:CDS
CAACTTCTTGCGTATCGCAG+AGG 0.641712 6_1:+97342106 Msa0901090:CDS
ACGCCTTATCCCTAGCATCA+GGG 0.644813 6_1:+97344111 Msa0901090:CDS
AGAAACTTCATTGCAACCCG+CGG 0.645280 6_1:-97344318 None:intergenic
TGTGAGATGTCAAAAGATTG+GGG 0.646053 6_1:-97346732 None:intergenic
AATGGAGAGGACTCCAGCAA+CGG 0.646565 6_1:-97342422 None:intergenic
AATCAAAACAATCAATACGA+AGG 0.649012 6_1:-97345788 None:intergenic
TTGCTAAGGGGATTAACCCA+AGG 0.651073 6_1:-97343327 None:intergenic
GTATGAACAGGTACTGAGGA+CGG 0.652338 6_1:+97344635 Msa0901090:intron
AACTGCTGTGTCACTGACTG+CGG 0.655571 6_1:-97343661 None:intergenic
CAAGTTGCCTCACCTAAGGA+GGG 0.658157 6_1:+97343092 Msa0901090:CDS
TTTGTATCAGGGTCGTCTAG+GGG 0.658708 6_1:+97344149 Msa0901090:CDS
AAGCTAACTTATCACCTGGA+GGG 0.659318 6_1:+97343780 Msa0901090:CDS
GCATCGCTACACATAACGCA+TGG 0.661583 6_1:-97343806 None:intergenic
GGAACATCTAAAACAAACGA+AGG 0.662095 6_1:-97347386 None:intergenic
AAAGCTAACTTATCACCTGG+AGG 0.662204 6_1:+97343779 Msa0901090:CDS
ATCCATAGATGGCTTTAGAG+GGG 0.663630 6_1:-97341632 None:intergenic
ACAGCTGCCCTCCTTAGGTG+AGG 0.665238 6_1:-97343099 None:intergenic
TCATGTGCTGAATCATCTTG+CGG 0.669479 6_1:-97342296 None:intergenic
TCTTGTATGAACAGGTACTG+AGG 0.671157 6_1:+97344631 Msa0901090:intron
CATGACAAACTCCCTTCTCG+TGG 0.673310 6_1:-97340618 None:intergenic
AAATGGAGGGGAGATGCAGG+TGG 0.677641 6_1:+97341600 Msa0901090:CDS
ACTCTCAAGTGGTAGAGATG+GGG 0.678113 6_1:+97345422 Msa0901090:CDS
ATCTTTCGGAGTATGAACGG+AGG 0.678229 6_1:+97338018 Msa0901090:CDS
TAATGCTATTATTATCCATG+GGG 0.680259 6_1:-97343998 None:intergenic
GATAAGGCGTAGCCCTCGTG+GGG 0.680781 6_1:-97344098 None:intergenic
AACGACGCAAGTATCAGCGT+CGG 0.684293 6_1:+97337848 Msa0901090:CDS
TAGTTGTCAAACTTGTGCTG+GGG 0.686483 6_1:-97346821 None:intergenic
ACCCTCATATCGGAATGGAG+AGG 0.686544 6_1:-97342435 None:intergenic
ATGTATAACACCCAGAACTG+TGG 0.688357 6_1:+97344020 Msa0901090:CDS
GTGCGAATACCAGGAAGACG+CGG 0.689054 6_1:-97344795 None:intergenic
GCATTCATCTATGGGATACG+AGG 0.690522 6_1:+97344042 Msa0901090:CDS
GGACTCACGAAGGAAAAGAG+AGG 0.692718 6_1:+97342687 Msa0901090:CDS
GGAGAATCAGAAGCTGCAGG+AGG 0.694299 6_1:-97343264 None:intergenic
CGAATACCAGGAAGACGCGG+AGG 0.697257 6_1:-97344792 None:intergenic
ACACTGCTTCCCTTGCCAGG+GGG 0.697594 6_1:+97344816 Msa0901090:CDS
ATCGATCCATAATCGCGATG+GGG 0.703125 6_1:+97337811 Msa0901090:CDS
GTTAAGGTTTATTTCAAACG+CGG 0.711300 6_1:+97337984 Msa0901090:CDS
GTTAAAAGCTACTCCCCACG+AGG 0.712829 6_1:+97344085 Msa0901090:CDS
CGAGTTTCATGGACTCACGA+AGG 0.717237 6_1:+97342677 Msa0901090:CDS
AGTGCAACCAACACCCCACG+CGG 0.721773 6_1:-97343621 None:intergenic
TTAAAAGCTACTCCCCACGA+GGG 0.737245 6_1:+97344086 Msa0901090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAAATTAAAAACAAT+TGG - chr6_1:97339417-97339436 None:intergenic 10.0%
!!! TTTTTTTTTTTTTACTTTTC+CGG + chr6_1:97340555-97340574 Msa0901090:intron 10.0%
!! AATAAAAACAGTAAAAAAAA+TGG - chr6_1:97341982-97342001 None:intergenic 10.0%
!!! ATAGTAATACTTTTTAAAAA+GGG - chr6_1:97342928-97342947 None:intergenic 10.0%
!!! CTGAGTAAATTTTATTTTAA+CGG + chr6_1:97339479-97339498 Msa0901090:intron 15.0%
!!! TGAGTCAATTTTTATATTAA+TGG + chr6_1:97339652-97339671 Msa0901090:intron 15.0%
!! TTAAAAATCAAAATCAAAAC+AGG - chr6_1:97339940-97339959 None:intergenic 15.0%
!!! TTTGATTTTGATTTTTAAGT+TGG + chr6_1:97339942-97339961 Msa0901090:intron 15.0%
!! ATACAACATTAAAATCAAAT+GGG - chr6_1:97340006-97340025 None:intergenic 15.0%
!!! AAATTTGCATTATTTTTTGT+AGG + chr6_1:97340786-97340805 Msa0901090:intron 15.0%
!! AAAAATCGAATAGATATAAA+AGG - chr6_1:97340985-97341004 None:intergenic 15.0%
!! AAAATAAAAAATGCAATTAG+TGG + chr6_1:97341436-97341455 Msa0901090:intron 15.0%
!!! TATTTCTTTCATCTTTTTTT+GGG + chr6_1:97341551-97341570 Msa0901090:intron 15.0%
!! TATTCAAAATACTAAAATCT+GGG - chr6_1:97342238-97342257 None:intergenic 15.0%
!!! CATAGTAATACTTTTTAAAA+AGG - chr6_1:97342929-97342948 None:intergenic 15.0%
!! TATAATTTATACAACACTTT+AGG - chr6_1:97344535-97344554 None:intergenic 15.0%
!! TAAATTACTAAAGTTCATTT+CGG + chr6_1:97345462-97345481 Msa0901090:exon 15.0%
!! TAACAAAGTTTATTATTATG+TGG + chr6_1:97347063-97347082 Msa0901090:intron 15.0%
!! GAAAATTGTATCTTCATAAA+CGG + chr6_1:97337604-97337623 Msa0901090:intron 20.0%
!!! TAGTTTGAGTTAAGTTAATT+AGG + chr6_1:97338241-97338260 Msa0901090:intron 20.0%
!! TGATTATTGTAGAATTGATT+CGG + chr6_1:97338348-97338367 Msa0901090:intron 20.0%
!!! TTTTTTCTTATAGTTTTGCT+AGG - chr6_1:97338830-97338849 None:intergenic 20.0%
!!! AGCTAATTTGATTTTGATTT+TGG + chr6_1:97338971-97338990 Msa0901090:intron 20.0%
!! AATTAGGATTTGATTGTATT+TGG + chr6_1:97339070-97339089 Msa0901090:intron 20.0%
!!! AATGTAATTTGGTTTATGTT+TGG + chr6_1:97339202-97339221 Msa0901090:intron 20.0%
!! CATACAACATTAAAATCAAA+TGG - chr6_1:97340007-97340026 None:intergenic 20.0%
!!! ATTGTATTTTCTCTTATCAT+GGG + chr6_1:97340732-97340751 Msa0901090:intron 20.0%
!! ATTTACAAGAATAACATCAA+TGG - chr6_1:97340770-97340789 None:intergenic 20.0%
!!! TCTTTCTTATTTCAATTTGT+TGG + chr6_1:97341012-97341031 Msa0901090:intron 20.0%
!! TAAATTATGAATTAAGCAAG+TGG + chr6_1:97341187-97341206 Msa0901090:intron 20.0%
!!! CTCTTTCTAGATTTTTTTTT+GGG + chr6_1:97341344-97341363 Msa0901090:intron 20.0%
!!! CTATTTCTTTCATCTTTTTT+TGG + chr6_1:97341550-97341569 Msa0901090:intron 20.0%
!!! ATTTCTTTCATCTTTTTTTG+GGG + chr6_1:97341552-97341571 Msa0901090:intron 20.0%
!!! TTAATTAACTGACTTAACAA+TGG + chr6_1:97341766-97341785 Msa0901090:intron 20.0%
!! AAATTTATAGAACAATCAAC+TGG - chr6_1:97341894-97341913 None:intergenic 20.0%
!! TAAAGTAAATCTAGAGAATT+CGG - chr6_1:97341926-97341945 None:intergenic 20.0%
!!! AAATATTATTTTACTTCCTC+AGG + chr6_1:97342032-97342051 Msa0901090:intron 20.0%
!! GTATTCAAAATACTAAAATC+TGG - chr6_1:97342239-97342258 None:intergenic 20.0%
!! AATGCACAGAAAATATATTT+CGG - chr6_1:97342472-97342491 None:intergenic 20.0%
!!! TTATTTTACCTTGATTTTGT+GGG + chr6_1:97342519-97342538 Msa0901090:intron 20.0%
!! ATCTTCATCATCAATATATA+GGG - chr6_1:97343145-97343164 None:intergenic 20.0%
!! GACTATCTTCTAATAATAAA+GGG + chr6_1:97343504-97343523 Msa0901090:intron 20.0%
!! ATAATGCTATTATTATCCAT+GGG - chr6_1:97344002-97344021 None:intergenic 20.0%
!!! TATGAAACAAAATCTAGTTT+TGG + chr6_1:97345030-97345049 Msa0901090:CDS 20.0%
!! TAAAATTAAAACAATCACTG+GGG - chr6_1:97345151-97345170 None:intergenic 20.0%
!! GTAAAATTAAAACAATCACT+GGG - chr6_1:97345152-97345171 None:intergenic 20.0%
!! AGTAAAATTAAAACAATCAC+TGG - chr6_1:97345153-97345172 None:intergenic 20.0%
!! AAACATTCTTCTCTTAATTT+GGG + chr6_1:97345599-97345618 Msa0901090:three_prime_UTR 20.0%
!! TAAAAATTGATCGTAATCAT+TGG + chr6_1:97346363-97346382 Msa0901090:three_prime_UTR 20.0%
!! CTTTCCATTATTTATTGAAT+TGG + chr6_1:97346412-97346431 Msa0901090:three_prime_UTR 20.0%
!! TAGTCCAATTCAATAAATAA+TGG - chr6_1:97346419-97346438 None:intergenic 20.0%
!! ACAAAATAGTTAGTGAAATA+TGG - chr6_1:97346676-97346695 None:intergenic 20.0%
!! ATATTACTATTTAATCCAAC+AGG + chr6_1:97346930-97346949 Msa0901090:three_prime_UTR 20.0%
!! TTCATCTAAACTTAAAATTC+AGG + chr6_1:97347020-97347039 Msa0901090:three_prime_UTR 20.0%
!! TATTAAAGAACTCAAATATG+CGG - chr6_1:97347135-97347154 None:intergenic 20.0%
! CTAAAATAAGCTAATCCAAA+TGG + chr6_1:97337706-97337725 Msa0901090:intron 25.0%
!! GATTTCACTTTCTTCTATTT+TGG + chr6_1:97338106-97338125 Msa0901090:intron 25.0%
! AACCAAACACATACTAAAAA+CGG - chr6_1:97338298-97338317 None:intergenic 25.0%
!! GATTATTGTAGAATTGATTC+GGG + chr6_1:97338349-97338368 Msa0901090:intron 25.0%
!! TTTTTATAATCCGTACCAAA+AGG - chr6_1:97338441-97338460 None:intergenic 25.0%
!!! TGATTTTGATACATAGAGTT+TGG + chr6_1:97338464-97338483 Msa0901090:intron 25.0%
!!! CTAAATTGTTATTTTCGTTC+TGG - chr6_1:97338545-97338564 None:intergenic 25.0%
! CAGAACGAAAATAACAATTT+AGG + chr6_1:97338543-97338562 Msa0901090:intron 25.0%
!!! TTGAATGAGAAGTTATTTTG+AGG + chr6_1:97339002-97339021 Msa0901090:intron 25.0%
!!! TTTTGAGGTTTGAGTTAATT+AGG + chr6_1:97339017-97339036 Msa0901090:intron 25.0%
! CTTTGTAGTTTGAACTAATT+AGG + chr6_1:97339054-97339073 Msa0901090:intron 25.0%
! GATTGTATTTGGTTACTTAA+TGG + chr6_1:97339081-97339100 Msa0901090:intron 25.0%
!! TGAATCTGTAAAATTGATTC+CGG + chr6_1:97339165-97339184 Msa0901090:intron 25.0%
! AAAGTGAGATGAATGTAATT+TGG + chr6_1:97339191-97339210 Msa0901090:intron 25.0%
!!! TAAACCTCTAGAATCAATTT+TGG + chr6_1:97339374-97339393 Msa0901090:intron 25.0%
!! AAACTTTGTTTGTAGTTTGA+GGG + chr6_1:97339517-97339536 Msa0901090:intron 25.0%
!!! TGATTTTAGTGTAGAAATTG+TGG + chr6_1:97339605-97339624 Msa0901090:intron 25.0%
!! ATAAAAATTGACTCAGCAAT+CGG - chr6_1:97339647-97339666 None:intergenic 25.0%
!!! TGATTTTTGAGTTGAAATTG+TGG + chr6_1:97339774-97339793 Msa0901090:intron 25.0%
!!! CTGAGTCAATTTGATTTTAA+TGG + chr6_1:97339815-97339834 Msa0901090:intron 25.0%
!! ATTTTGTTACTGAAAAGACT+TGG + chr6_1:97339892-97339911 Msa0901090:intron 25.0%
! TTAATGTTGTATGTAGTTTG+AGG + chr6_1:97340014-97340033 Msa0901090:intron 25.0%
! TAATGTTGTATGTAGTTTGA+GGG + chr6_1:97340015-97340034 Msa0901090:intron 25.0%
! GAATTTCCGATTACTATATT+TGG + chr6_1:97340037-97340056 Msa0901090:intron 25.0%
!! CAACATTTTGTAGTAAAAAG+CGG - chr6_1:97340148-97340167 None:intergenic 25.0%
!!! CATTGATTTGGTTACTTAAA+AGG + chr6_1:97340244-97340263 Msa0901090:intron 25.0%
! TGTACTTTAAATTACTCATG+TGG + chr6_1:97340312-97340331 Msa0901090:intron 25.0%
!!! TTTTTTTACTTTTCCGGTTT+TGG + chr6_1:97340561-97340580 Msa0901090:intron 25.0%
!!! TTTTTTACTTTTCCGGTTTT+GGG + chr6_1:97340562-97340581 Msa0901090:intron 25.0%
! ACAAACACAATTAGAAAAGA+GGG + chr6_1:97340678-97340697 Msa0901090:intron 25.0%
!! GATTGTATTTTCTCTTATCA+TGG + chr6_1:97340731-97340750 Msa0901090:intron 25.0%
! AAGAAAAAAGAGAAATCAGA+TGG - chr6_1:97340909-97340928 None:intergenic 25.0%
!!! TTTCTCTTTTTTCTTTGACA+CGG + chr6_1:97340914-97340933 Msa0901090:CDS 25.0%
! CGAATAGATATAAAAGGAAA+AGG - chr6_1:97340979-97340998 None:intergenic 25.0%
! TAAATTGTGAATTAAGCAAG+TGG + chr6_1:97341141-97341160 Msa0901090:intron 25.0%
! ATAGTTTAATCAAGTCATCA+GGG - chr6_1:97341167-97341186 None:intergenic 25.0%
! AATAGTTTAATCAAGTCATC+AGG - chr6_1:97341168-97341187 None:intergenic 25.0%
! CCAAAAAAAAATCTAGAAAG+AGG - chr6_1:97341346-97341365 None:intergenic 25.0%
!!! CCTCTTTCTAGATTTTTTTT+TGG + chr6_1:97341343-97341362 Msa0901090:intron 25.0%
!! AGAGATTTTATGAAAATGGA+GGG + chr6_1:97341587-97341606 Msa0901090:intron 25.0%
!!! TTCTTTTTCAACCATGTTTT+AGG + chr6_1:97341712-97341731 Msa0901090:intron 25.0%
!! TCTTATTTAAGCCTAAAACA+TGG - chr6_1:97341726-97341745 None:intergenic 25.0%
! AATAAGAATACTTAATGTGC+AGG + chr6_1:97341739-97341758 Msa0901090:intron 25.0%
! TTGTAGTAATATAATCTGCA+AGG + chr6_1:97341818-97341837 Msa0901090:intron 25.0%
! CATATTGTGTAATTATGTTG+AGG + chr6_1:97341844-97341863 Msa0901090:intron 25.0%
! AAAGTAAATCTAGAGAATTC+GGG - chr6_1:97341925-97341944 None:intergenic 25.0%
! TTGAATACTTCATTCTCTAT+TGG + chr6_1:97342251-97342270 Msa0901090:intron 25.0%
!!! CTTATTTTACCTTGATTTTG+TGG + chr6_1:97342518-97342537 Msa0901090:intron 25.0%
!!! ACTTTTTAGATTTTCAGGAA+AGG - chr6_1:97342845-97342864 None:intergenic 25.0%
!! TGCAAACTTTTTAGATTTTC+AGG - chr6_1:97342850-97342869 None:intergenic 25.0%
! GATCTTCATCATCAATATAT+AGG - chr6_1:97343146-97343165 None:intergenic 25.0%
! GGACTATCTTCTAATAATAA+AGG + chr6_1:97343503-97343522 Msa0901090:intron 25.0%
! TAATGCTATTATTATCCATG+GGG - chr6_1:97344001-97344020 None:intergenic 25.0%
! CATAATGCTATTATTATCCA+TGG - chr6_1:97344003-97344022 None:intergenic 25.0%
!! AAGAGACAAATCTTTTCTAT+AGG - chr6_1:97344242-97344261 None:intergenic 25.0%
! AATTACAAATATTCCATACC+TGG - chr6_1:97344373-97344392 None:intergenic 25.0%
! ACAGTATATTTGATAGAACT+AGG - chr6_1:97344434-97344453 None:intergenic 25.0%
! ATAAAAACAAAAGGAGGTAA+AGG - chr6_1:97344505-97344524 None:intergenic 25.0%
! ACTTCAATAAAAACAAAAGG+AGG - chr6_1:97344511-97344530 None:intergenic 25.0%
! GGTACTTCAATAAAAACAAA+AGG - chr6_1:97344514-97344533 None:intergenic 25.0%
! GTAATGAAAACCAATGTATT+TGG - chr6_1:97344584-97344603 None:intergenic 25.0%
!! GATTATTTTCTTGTATGAAC+AGG + chr6_1:97344623-97344642 Msa0901090:intron 25.0%
! TATATGAATCAATGTTTGAC+AGG + chr6_1:97345073-97345092 Msa0901090:intron 25.0%
!! AACCTTTTACTCTTATAAAC+AGG + chr6_1:97345266-97345285 Msa0901090:intron 25.0%
! CTGTACATAAAGTAAGTTAT+TGG + chr6_1:97345526-97345545 Msa0901090:three_prime_UTR 25.0%
! GAAAAGGAAAGAGAAAAATT+TGG - chr6_1:97345558-97345577 None:intergenic 25.0%
! CAAACATTCTTCTCTTAATT+TGG + chr6_1:97345598-97345617 Msa0901090:three_prime_UTR 25.0%
!! AACATTCTTCTCTTAATTTG+GGG + chr6_1:97345600-97345619 Msa0901090:three_prime_UTR 25.0%
! AATCAAAACAATCAATACGA+AGG - chr6_1:97345791-97345810 None:intergenic 25.0%
!!! TTCGTATTGATTGTTTTGAT+TGG + chr6_1:97345790-97345809 Msa0901090:three_prime_UTR 25.0%
!!! TCGTATTGATTGTTTTGATT+GGG + chr6_1:97345791-97345810 Msa0901090:three_prime_UTR 25.0%
! TTTCCCAATTTCAACAAAAA+GGG - chr6_1:97346075-97346094 None:intergenic 25.0%
! CAATAGGAAAAACACAAAAA+GGG - chr6_1:97346203-97346222 None:intergenic 25.0%
! TCAATAGGAAAAACACAAAA+AGG - chr6_1:97346204-97346223 None:intergenic 25.0%
! ACAATATAACTTTCATTACG+TGG - chr6_1:97346633-97346652 None:intergenic 25.0%
! GAAACTAAAATTGTGAAACT+AGG - chr6_1:97346906-97346925 None:intergenic 25.0%
!! TTAAGTTTAGATGAAGTGTT+GGG - chr6_1:97347015-97347034 None:intergenic 25.0%
!! TTTAAGTTTAGATGAAGTGT+TGG - chr6_1:97347016-97347035 None:intergenic 25.0%
!!! AAAATTCAGGCAAGTTTTTT+CGG + chr6_1:97347033-97347052 Msa0901090:intron 25.0%
! GTGTTGTGTATAATAACAAT+AGG + chr6_1:97347435-97347454 Msa0901090:three_prime_UTR 25.0%
! ATAGGTTTAAGAATTTAGCT+TGG + chr6_1:97347453-97347472 Msa0901090:three_prime_UTR 25.0%
! CTTATTAAGATAGATGCTAA+GGG - chr6_1:97347540-97347559 None:intergenic 25.0%
! ACTTATTAAGATAGATGCTA+AGG - chr6_1:97347541-97347560 None:intergenic 25.0%
! TCTTAATAAGTCCTCATTTA+TGG + chr6_1:97347550-97347569 Msa0901090:three_prime_UTR 25.0%
TCAAATAAGCTCAAACCAAA+CGG - chr6_1:97337524-97337543 None:intergenic 30.0%
GATTATGGATCGATTATTTG+TGG - chr6_1:97337805-97337824 None:intergenic 30.0%
AGAACTAGATTATACGTTGA+TGG - chr6_1:97337894-97337913 None:intergenic 30.0%
GTTAAGGTTTATTTCAAACG+CGG + chr6_1:97337984-97338003 Msa0901090:CDS 30.0%
TTAATCTTTCGGAGTATGAA+CGG + chr6_1:97338015-97338034 Msa0901090:CDS 30.0%
!!! TTCCGTTTTTAGTATGTGTT+TGG + chr6_1:97338293-97338312 Msa0901090:intron 30.0%
TTGATACATAGAGTTTGGTA+TGG + chr6_1:97338469-97338488 Msa0901090:intron 30.0%
! AGTATCACCTATCTCTATTT+TGG + chr6_1:97338626-97338645 Msa0901090:intron 30.0%
TCAACATCCAAAATAGAGAT+AGG - chr6_1:97338636-97338655 None:intergenic 30.0%
!!! TTTTTTTCCGCTGAAAATTG+TGG + chr6_1:97338665-97338684 Msa0901090:intron 30.0%
TAATCTACTCTCTTTACTAC+AGG - chr6_1:97338770-97338789 None:intergenic 30.0%
AGTAAAGAGAGTAGATTAGA+TGG + chr6_1:97338772-97338791 Msa0901090:intron 30.0%
! TAGTGAGTTGGATAGAAATA+TGG + chr6_1:97338871-97338890 Msa0901090:intron 30.0%
! TTGTTGATATTTTGCTCTGT+TGG + chr6_1:97339106-97339125 Msa0901090:intron 30.0%
!! ACATTCATCTCACTTTTAAC+CGG - chr6_1:97339187-97339206 None:intergenic 30.0%
CAAGTTAGAATCAATTGTGA+AGG + chr6_1:97339304-97339323 Msa0901090:intron 30.0%
!! AAAACAATTGGTTCCACTTT+TGG - chr6_1:97339405-97339424 None:intergenic 30.0%
! GAAACTTTGTTTGTAGTTTG+AGG + chr6_1:97339516-97339535 Msa0901090:intron 30.0%
! TACTGTGTTTGTTAACTGAA+AGG + chr6_1:97339718-97339737 Msa0901090:intron 30.0%
! AAAATCAAATTGACTCAGCA+TGG - chr6_1:97339813-97339832 None:intergenic 30.0%
! AAACACTGTTTTGTAGTTTG+AGG + chr6_1:97339853-97339872 Msa0901090:intron 30.0%
! AACACTGTTTTGTAGTTTGA+GGG + chr6_1:97339854-97339873 Msa0901090:intron 30.0%
!!! TGATTTTTAAGTTGGCATTG+TGG + chr6_1:97339950-97339969 Msa0901090:intron 30.0%
GCTGAACCAAATATAGTAAT+CGG - chr6_1:97340046-97340065 None:intergenic 30.0%
AAATCAATGTTGTCAATCAC+TGG - chr6_1:97340233-97340252 None:intergenic 30.0%
! AGTGATTGACAACATTGATT+TGG + chr6_1:97340232-97340251 Msa0901090:intron 30.0%
! ATAAAGCAGCTTATCTTTTG+AGG + chr6_1:97340371-97340390 Msa0901090:CDS 30.0%
TTAGTCGATCATGCAAATTA+TGG - chr6_1:97340408-97340427 None:intergenic 30.0%
TTCTCAACGAAACTAAGAAA+AGG - chr6_1:97340439-97340458 None:intergenic 30.0%
TTAGTTTCGTTGAGAAGAAA+TGG + chr6_1:97340443-97340462 Msa0901090:CDS 30.0%
AAAAATAAGTGGACAAGTGA+AGG - chr6_1:97340485-97340504 None:intergenic 30.0%
GACAAACACAATTAGAAAAG+AGG + chr6_1:97340677-97340696 Msa0901090:intron 30.0%
!!! TTCTCTTTTTTCTTTGACAC+GGG + chr6_1:97340915-97340934 Msa0901090:CDS 30.0%
CGTAAATAAGAAAGACAACT+TGG - chr6_1:97341043-97341062 None:intergenic 30.0%
CCTCTAAGCATATAATTATC+TGG - chr6_1:97341115-97341134 None:intergenic 30.0%
CCAGATAATTATATGCTTAG+AGG + chr6_1:97341112-97341131 Msa0901090:intron 30.0%
GATTAAACTAGGACTCATAT+TGG + chr6_1:97341222-97341241 Msa0901090:intron 30.0%
ATACTACTAATCTGTGCTTT+AGG + chr6_1:97341275-97341294 Msa0901090:intron 30.0%
!!! ACAGATTTTTTGTTAACGTC+AGG - chr6_1:97341308-97341327 None:intergenic 30.0%
AAACTACAGAGAGAGAAAAA+AGG - chr6_1:97341412-97341431 None:intergenic 30.0%
! ATTTTCATAAAATCTCTGGC+AGG - chr6_1:97341584-97341603 None:intergenic 30.0%
! TGCCAGAGATTTTATGAAAA+TGG + chr6_1:97341583-97341602 Msa0901090:intron 30.0%
! CTCCATTTTCATAAAATCTC+TGG - chr6_1:97341588-97341607 None:intergenic 30.0%
! CAGAGATTTTATGAAAATGG+AGG + chr6_1:97341586-97341605 Msa0901090:intron 30.0%
! GAGATTTTATGAAAATGGAG+GGG + chr6_1:97341588-97341607 Msa0901090:intron 30.0%
ACAGCAAATAAATCCATAGA+TGG - chr6_1:97341646-97341665 None:intergenic 30.0%
!! TCTATGGATTTATTTGCTGT+TGG + chr6_1:97341646-97341665 Msa0901090:CDS 30.0%
!! CTATGGATTTATTTGCTGTT+GGG + chr6_1:97341647-97341666 Msa0901090:CDS 30.0%
TTATTGAAAAGTAACCAGTG+TGG + chr6_1:97341943-97341962 Msa0901090:intron 30.0%
ATATTTGTACCTTAGCAAGA+AGG - chr6_1:97342018-97342037 None:intergenic 30.0%
!!! ACTTTTTCAAGATGTTGACT+TGG - chr6_1:97342142-97342161 None:intergenic 30.0%
!!! TGTCTTATTTTGTTCTCCAA+TGG + chr6_1:97342174-97342193 Msa0901090:intron 30.0%
TTCTGCTGAAATGTATCTAA+AGG + chr6_1:97342344-97342363 Msa0901090:CDS 30.0%
GAAATGGTGAAAAATAGGTA+GGG - chr6_1:97342389-97342408 None:intergenic 30.0%
AGAAATGGTGAAAAATAGGT+AGG - chr6_1:97342390-97342409 None:intergenic 30.0%
ATGCAGAAATGGTGAAAAAT+AGG - chr6_1:97342394-97342413 None:intergenic 30.0%
AAACACATATACCCTCATAT+CGG - chr6_1:97342448-97342467 None:intergenic 30.0%
TCATTTGTTTAAGTATCTCC+TGG - chr6_1:97342582-97342601 None:intergenic 30.0%
AATAATAATAAGAGTCCAGC+TGG + chr6_1:97342784-97342803 Msa0901090:CDS 30.0%
! TTGTAATGGAGAATCACATA+TGG - chr6_1:97343186-97343205 None:intergenic 30.0%
TATAATGGTATACCTTCTGA+TGG - chr6_1:97343210-97343229 None:intergenic 30.0%
TCCATTACAAATGAATTCTC+TGG + chr6_1:97343284-97343303 Msa0901090:CDS 30.0%
CCATTACAAATGAATTCTCT+GGG + chr6_1:97343285-97343304 Msa0901090:CDS 30.0%
!! AAATTAAAGGACTTGCTAAG+GGG - chr6_1:97343342-97343361 None:intergenic 30.0%
!! CAAATTAAAGGACTTGCTAA+GGG - chr6_1:97343343-97343362 None:intergenic 30.0%
AACTGAATTGGCCAAATTAA+AGG - chr6_1:97343355-97343374 None:intergenic 30.0%
AAAAGAACCTGAAATAGCTT+TGG - chr6_1:97343384-97343403 None:intergenic 30.0%
! GGTTCTTTTAGCATTAACAA+TGG + chr6_1:97343395-97343414 Msa0901090:intron 30.0%
! TTGAAATGTGCTATTCAGAA+AGG - chr6_1:97343477-97343496 None:intergenic 30.0%
AATAGCACATTTCAAGATGT+GGG + chr6_1:97343482-97343501 Msa0901090:intron 30.0%
AAATCCTGATAAATCAGCTT+GGG - chr6_1:97343559-97343578 None:intergenic 30.0%
TGGAAAAAGACATTTCATTC+AGG + chr6_1:97343754-97343773 Msa0901090:CDS 30.0%
!! TCTGTTGATCATATTTCTAG+AGG + chr6_1:97343885-97343904 Msa0901090:CDS 30.0%
!! AATGTTGTTGAGAAGTATTC+CGG + chr6_1:97343915-97343934 Msa0901090:CDS 30.0%
CTATTTATCCAGAGAAGTTA+TGG + chr6_1:97344468-97344487 Msa0901090:intron 30.0%
!! TTTGATGATGCCAAATACAT+TGG + chr6_1:97344571-97344590 Msa0901090:intron 30.0%
TGATTTAAAGATACGTCGAT+GGG + chr6_1:97344860-97344879 Msa0901090:CDS 30.0%
! CCAATTAGACTATTTTCACA+AGG - chr6_1:97344920-97344939 None:intergenic 30.0%
CCTTGTGAAAATAGTCTAAT+TGG + chr6_1:97344917-97344936 Msa0901090:intron 30.0%
TTGTACAATCTAAATGCTGT+TGG + chr6_1:97345183-97345202 Msa0901090:intron 30.0%
! AACAAAGTTGGACACTTTTA+AGG - chr6_1:97345224-97345243 None:intergenic 30.0%
GTCCAACTTTGTTAGTATAT+AGG + chr6_1:97345231-97345250 Msa0901090:intron 30.0%
TGCCTATATACTAACAAAGT+TGG - chr6_1:97345236-97345255 None:intergenic 30.0%
CTCCTGTTTATAAGAGTAAA+AGG - chr6_1:97345271-97345290 None:intergenic 30.0%
ATAAACAGGAGACAAAAAGA+CGG + chr6_1:97345280-97345299 Msa0901090:intron 30.0%
AATTTACTTCCAAACCTTGA+TGG - chr6_1:97345448-97345467 None:intergenic 30.0%
ATCAGTTCAAGAATTGGAAA+AGG - chr6_1:97345574-97345593 None:intergenic 30.0%
! ACATTCTTCTCTTAATTTGG+GGG + chr6_1:97345601-97345620 Msa0901090:three_prime_UTR 30.0%
AAATTGCATATTGATCCTGT+TGG + chr6_1:97345635-97345654 Msa0901090:three_prime_UTR 30.0%
TGATGATTTCACACTGTATT+TGG + chr6_1:97345750-97345769 Msa0901090:three_prime_UTR 30.0%
CTTTCCCAATTTCAACAAAA+AGG - chr6_1:97346076-97346095 None:intergenic 30.0%
! CTTTGTTATCTGATCTTGAT+TGG - chr6_1:97346124-97346143 None:intergenic 30.0%
TCAAGATCAGATAACAAAGT+AGG + chr6_1:97346125-97346144 Msa0901090:three_prime_UTR 30.0%
TCCTATTGAATGTGATTGAT+TGG + chr6_1:97346215-97346234 Msa0901090:three_prime_UTR 30.0%
TCCAATCAATCACATTCAAT+AGG - chr6_1:97346219-97346238 None:intergenic 30.0%
TGTAAGTTGTATCATAGCAA+AGG + chr6_1:97346386-97346405 Msa0901090:three_prime_UTR 30.0%
GTAAGTTGTATCATAGCAAA+GGG + chr6_1:97346387-97346406 Msa0901090:three_prime_UTR 30.0%
!! ATGAACACAGATTTGCTATA+AGG + chr6_1:97346560-97346579 Msa0901090:three_prime_UTR 30.0%
TTGTGAGATGTCAAAAGATT+GGG - chr6_1:97346736-97346755 None:intergenic 30.0%
!! TTGGTTTTTCTCATAGACAT+AGG - chr6_1:97346848-97346867 None:intergenic 30.0%
!!! AAATTCAGGCAAGTTTTTTC+GGG + chr6_1:97347034-97347053 Msa0901090:intron 30.0%
! GAAACTTGAATCAAAAGCAT+TGG - chr6_1:97347095-97347114 None:intergenic 30.0%
ATATTAATCTCTGAACCAAC+AGG + chr6_1:97347152-97347171 Msa0901090:intron 30.0%
!! AAGAATTTAGCTTGGTTGTT+TGG + chr6_1:97347461-97347480 Msa0901090:three_prime_UTR 30.0%
GTACATATTGAACTTTCAGA+AGG - chr6_1:97347518-97347537 None:intergenic 30.0%
AATAAGTCCTCATTTATGGA+TGG + chr6_1:97347554-97347573 Msa0901090:three_prime_UTR 30.0%
ATAAGTCCTCATTTATGGAT+GGG + chr6_1:97347555-97347574 Msa0901090:three_prime_UTR 30.0%
TGAAATCACGTTTCTAACTG+AGG + chr6_1:97337496-97337515 Msa0901090:five_prime_UTR 35.0%
CAAATAAGCTCAAACCAAAC+GGG - chr6_1:97337523-97337542 None:intergenic 35.0%
TGTGCATTTGAAAGATGTTC+GGG - chr6_1:97337740-97337759 None:intergenic 35.0%
GTGTGCATTTGAAAGATGTT+CGG - chr6_1:97337741-97337760 None:intergenic 35.0%
!! CTAGTTCTGAAAGAAGTTCT+TGG + chr6_1:97337906-97337925 Msa0901090:CDS 35.0%
ATTCAGTGTAAACACGATGA+AGG + chr6_1:97337951-97337970 Msa0901090:CDS 35.0%
!! TGAAGGTTTGGTTCTTGTTA+AGG + chr6_1:97337968-97337987 Msa0901090:CDS 35.0%
CGGCGATTCTATTAATCTTT+CGG + chr6_1:97338004-97338023 Msa0901090:CDS 35.0%
! GTATTGATCATCCTCATGTT+TGG + chr6_1:97338069-97338088 Msa0901090:CDS 35.0%
AGTGAAATCCAAACCTGAAA+AGG - chr6_1:97338095-97338114 None:intergenic 35.0%
TGTTGTAGTTTGAGCTAGTT+AGG + chr6_1:97338198-97338217 Msa0901090:intron 35.0%
!! TGATGGTGGAAACTAAACTT+AGG + chr6_1:97338722-97338741 Msa0901090:intron 35.0%
GAAACTAAACTTAGGTGGTT+TGG + chr6_1:97338730-97338749 Msa0901090:intron 35.0%
TATCCAACTCACTAATCTCT+AGG - chr6_1:97338865-97338884 None:intergenic 35.0%
! TGGTACGTGATAGAACATTT+TGG + chr6_1:97338891-97338910 Msa0901090:intron 35.0%
!! AGAATCGATTTTGACATGCT+TGG - chr6_1:97339355-97339374 None:intergenic 35.0%
! GGAACCAAAATTGATTCTAG+AGG - chr6_1:97339381-97339400 None:intergenic 35.0%
!!! AATTTTGGTTCCTCCAAAAG+TGG + chr6_1:97339389-97339408 Msa0901090:intron 35.0%
!! AATGGGCTAAAAGTTCAGTT+AGG - chr6_1:97339989-97340008 None:intergenic 35.0%
TGTTGAATAGCCAGCTATAT+TGG + chr6_1:97340068-97340087 Msa0901090:intron 35.0%
!! TTGTAGTAAAAAGCGGATTG+CGG - chr6_1:97340141-97340160 None:intergenic 35.0%
TCATGACACTATAGTACTGT+TGG + chr6_1:97340182-97340201 Msa0901090:intron 35.0%
CATGACACTATAGTACTGTT+GGG + chr6_1:97340183-97340202 Msa0901090:intron 35.0%
ACTATAGTACTGTTGGGTAT+TGG + chr6_1:97340189-97340208 Msa0901090:intron 35.0%
CTATAGTACTGTTGGGTATT+GGG + chr6_1:97340190-97340209 Msa0901090:intron 35.0%
! TGTCTGTGATTTTGCAGTTT+TGG + chr6_1:97340338-97340357 Msa0901090:intron 35.0%
TTTCGTTGAGAAGAAATGGT+TGG + chr6_1:97340447-97340466 Msa0901090:CDS 35.0%
TTTACAGCTAAAAGCAACTG+TGG - chr6_1:97340592-97340611 None:intergenic 35.0%
TGCTAATTACGTCCTCAAAT+TGG + chr6_1:97340829-97340848 Msa0901090:CDS 35.0%
AAATCAGATGGATCGTCATA+CGG - chr6_1:97340897-97340916 None:intergenic 35.0%
CTAGTTTAATCAAGTCAGCA+GGG - chr6_1:97341213-97341232 None:intergenic 35.0%
!! AATCCATAGATGGCTTTAGA+GGG - chr6_1:97341636-97341655 None:intergenic 35.0%
!! AAATCCATAGATGGCTTTAG+AGG - chr6_1:97341637-97341656 None:intergenic 35.0%
GTGTAATTATGTTGAGGTAG+TGG + chr6_1:97341850-97341869 Msa0901090:intron 35.0%
! TTTTGTGTTCCTTCTTGCTA+AGG + chr6_1:97342006-97342025 Msa0901090:intron 35.0%
AGTTGAGACAGTTCAAATAG+TGG - chr6_1:97342091-97342110 None:intergenic 35.0%
TCCAATGGTCCCATTAATAA+GGG + chr6_1:97342189-97342208 Msa0901090:intron 35.0%
TAAAATCTGGGTCATGAGTA+TGG - chr6_1:97342226-97342245 None:intergenic 35.0%
ATGTATCTAAAGGAATACGC+TGG + chr6_1:97342354-97342373 Msa0901090:CDS 35.0%
CGGTAAAAATCATGCAGAAA+TGG - chr6_1:97342405-97342424 None:intergenic 35.0%
AGATTGTTCCCACAAAATCA+AGG - chr6_1:97342530-97342549 None:intergenic 35.0%
CATGATCAGTATGAACTTCT+TGG + chr6_1:97342730-97342749 Msa0901090:CDS 35.0%
ACTATATCGAATGCATTTCG+AGG + chr6_1:97342892-97342911 Msa0901090:CDS 35.0%
ATCCGACTGACTATCATATT+CGG - chr6_1:97342974-97342993 None:intergenic 35.0%
TCCTTTCGTAATGGTAGAAA+GGG - chr6_1:97343009-97343028 None:intergenic 35.0%
ATCCTTTCGTAATGGTAGAA+AGG - chr6_1:97343010-97343029 None:intergenic 35.0%
CTCATAGTATCCTTTCGTAA+TGG - chr6_1:97343018-97343037 None:intergenic 35.0%
AAGGATACTATGAGATGTGA+AGG + chr6_1:97343024-97343043 Msa0901090:CDS 35.0%
ACCATTATACTCCTTTAGTG+TGG + chr6_1:97343221-97343240 Msa0901090:CDS 35.0%
! TCCACACTAAAGGAGTATAA+TGG - chr6_1:97343225-97343244 None:intergenic 35.0%
CCCAGAGAATTCATTTGTAA+TGG - chr6_1:97343288-97343307 None:intergenic 35.0%
!! CCAAATTAAAGGACTTGCTA+AGG - chr6_1:97343344-97343363 None:intergenic 35.0%
CCTTAGCAAGTCCTTTAATT+TGG + chr6_1:97343341-97343360 Msa0901090:CDS 35.0%
GAATAGCACATTTCAAGATG+TGG + chr6_1:97343481-97343500 Msa0901090:intron 35.0%
GAAATCCTGATAAATCAGCT+TGG - chr6_1:97343560-97343579 None:intergenic 35.0%
! CAGGATTTCAATCTTTTGCT+CGG + chr6_1:97343571-97343590 Msa0901090:CDS 35.0%
ATGACTTGACAGTCAAGATT+TGG + chr6_1:97343718-97343737 Msa0901090:CDS 35.0%
TGACTTGACAGTCAAGATTT+GGG + chr6_1:97343719-97343738 Msa0901090:CDS 35.0%
! AATGTCTTTTTCCAGCTTTC+TGG - chr6_1:97343748-97343767 None:intergenic 35.0%
!! GATCATATTTCTAGAGGTCT+AGG + chr6_1:97343891-97343910 Msa0901090:CDS 35.0%
TATTGCTGATATCACAGAGA+AGG + chr6_1:97343938-97343957 Msa0901090:CDS 35.0%
GCAATTTAAAAGGCCAAGTA+TGG - chr6_1:97343979-97343998 None:intergenic 35.0%
TATCCATGGGGCAATTTAAA+AGG - chr6_1:97343989-97344008 None:intergenic 35.0%
! AGCTTTTAACGTCCAAGAAT+TGG - chr6_1:97344075-97344094 None:intergenic 35.0%
! TAGGGGTGTAATTACACTTT+GGG + chr6_1:97344166-97344185 Msa0901090:CDS 35.0%
TTCTTGAACCTGTAAACTCT+TGG + chr6_1:97344198-97344217 Msa0901090:CDS 35.0%
GAATACTTCCAAGAGTTTAC+AGG - chr6_1:97344209-97344228 None:intergenic 35.0%
GTTGCAATGAAGTTTCTCTT+TGG + chr6_1:97344324-97344343 Msa0901090:CDS 35.0%
TACAAATATTCCATACCTGG+TGG - chr6_1:97344370-97344389 None:intergenic 35.0%
TTCTGCATCACTGTCATAAT+TGG - chr6_1:97344661-97344680 None:intergenic 35.0%
! TGAAAAGTTGGCTTACTTGA+AGG - chr6_1:97344714-97344733 None:intergenic 35.0%
CTGATTTAAAGATACGTCGA+TGG + chr6_1:97344859-97344878 Msa0901090:CDS 35.0%
ATTTGTGGACCAAACCTTAA+AGG + chr6_1:97344988-97345007 Msa0901090:CDS 35.0%
!! TTTCCAACTCCTTTAAGGTT+TGG - chr6_1:97345000-97345019 None:intergenic 35.0%
! TTTTGGTCATTGGAAAACAC+TGG - chr6_1:97345118-97345137 None:intergenic 35.0%
!! TAACAGGAGATTTTGGTCAT+TGG - chr6_1:97345128-97345147 None:intergenic 35.0%
CAGACACAATAGAATCATGA+TGG - chr6_1:97345371-97345390 None:intergenic 35.0%
TCATGATTCTATTGTGTCTG+TGG + chr6_1:97345371-97345390 Msa0901090:CDS 35.0%
TGAGCAATCAGTTCAAGAAT+TGG - chr6_1:97345580-97345599 None:intergenic 35.0%
TTCACACTGTATTTGGAGAA+AGG + chr6_1:97345757-97345776 Msa0901090:three_prime_UTR 35.0%
!!! GTTTTGATTGGGAGTGATTT+AGG + chr6_1:97345802-97345821 Msa0901090:three_prime_UTR 35.0%
TGAAATCGACAAGATGAACA+TGG - chr6_1:97346030-97346049 None:intergenic 35.0%
! AACGCCCTTTTTGTTGAAAT+TGG + chr6_1:97346068-97346087 Msa0901090:three_prime_UTR 35.0%
! ACGCCCTTTTTGTTGAAATT+GGG + chr6_1:97346069-97346088 Msa0901090:three_prime_UTR 35.0%
! AAATTGGGAAAGCACACATT+CGG + chr6_1:97346084-97346103 Msa0901090:three_prime_UTR 35.0%
! TGGAAAAGTTATCAGCCTTT+TGG + chr6_1:97346235-97346254 Msa0901090:three_prime_UTR 35.0%
GCACAATGACTTAAACCAAA+AGG - chr6_1:97346253-97346272 None:intergenic 35.0%
GTGCACAATAATTGAGAGTT+TGG + chr6_1:97346269-97346288 Msa0901090:three_prime_UTR 35.0%
TATTGAATTGGACTAACGAC+TGG + chr6_1:97346424-97346443 Msa0901090:three_prime_UTR 35.0%
TGTGAGATGTCAAAAGATTG+GGG - chr6_1:97346735-97346754 None:intergenic 35.0%
CTTGTGAGATGTCAAAAGAT+TGG - chr6_1:97346737-97346756 None:intergenic 35.0%
ATAGTTGTCAAACTTGTGCT+GGG - chr6_1:97346825-97346844 None:intergenic 35.0%
AGCATTTGCAAAACTTGTCT+TGG - chr6_1:97346873-97346892 None:intergenic 35.0%
!! TGAATCAAAAGCATTGGTGA+AGG - chr6_1:97347089-97347108 None:intergenic 35.0%
TGATTTCATTGCTGAAAGTG+AGG + chr6_1:97347197-97347216 Msa0901090:three_prime_UTR 35.0%
TGAAAGTGAGGCTGAAATAT+TGG + chr6_1:97347209-97347228 Msa0901090:three_prime_UTR 35.0%
!!! TTTTGGAACTTCAGTTGTCT+TGG - chr6_1:97347331-97347350 None:intergenic 35.0%
ACAACTGAAGTTCCAAAAGT+AGG + chr6_1:97347333-97347352 Msa0901090:three_prime_UTR 35.0%
! CTATATTTCCCTCCTACTTT+TGG - chr6_1:97347348-97347367 None:intergenic 35.0%
! GGAACATCTAAAACAAACGA+AGG - chr6_1:97347389-97347408 None:intergenic 35.0%
! TTAGCTTGGTTGTTTGGATT+TGG + chr6_1:97347467-97347486 Msa0901090:three_prime_UTR 35.0%
!! TGAACTTTCAGAAGGCATTA+AGG - chr6_1:97347510-97347529 None:intergenic 35.0%
TAAGTCCTCATTTATGGATG+GGG + chr6_1:97347556-97347575 Msa0901090:three_prime_UTR 35.0%
GAGAGCAACAATACAATCAA+AGG - chr6_1:97347595-97347614 None:intergenic 35.0%
TTGAAAGATGTTCGGGAAGA+GGG - chr6_1:97337733-97337752 None:intergenic 40.0%
TTTGAAAGATGTTCGGGAAG+AGG - chr6_1:97337734-97337753 None:intergenic 40.0%
TAATCGATCCATAATCGCGA+TGG + chr6_1:97337809-97337828 Msa0901090:CDS 40.0%
AATCGATCCATAATCGCGAT+GGG + chr6_1:97337810-97337829 Msa0901090:CDS 40.0%
GTGTAAACACGATGAAGGTT+TGG + chr6_1:97337956-97337975 Msa0901090:CDS 40.0%
ACGGAGGATTTCGATGATTA+AGG + chr6_1:97338034-97338053 Msa0901090:CDS 40.0%
!!! ATGTTTGGCCTTTTCAGGTT+TGG + chr6_1:97338084-97338103 Msa0901090:intron 40.0%
! TCAGTAAATCAGCGTCCTTT+TGG + chr6_1:97338423-97338442 Msa0901090:intron 40.0%
! AAATCAGCGTCCTTTTGGTA+CGG + chr6_1:97338428-97338447 Msa0901090:intron 40.0%
GCTACTAAAAACAGCTTCTC+AGG + chr6_1:97338599-97338618 Msa0901090:intron 40.0%
! ACCACAACCACAATTTTCAG+CGG - chr6_1:97338675-97338694 None:intergenic 40.0%
! CACTGTATGCTTAGTGTTGA+TGG + chr6_1:97338705-97338724 Msa0901090:intron 40.0%
!! TGTATGCTTAGTGTTGATGG+TGG + chr6_1:97338708-97338727 Msa0901090:intron 40.0%
TGGTGGAAACTAAACTTAGG+TGG + chr6_1:97338725-97338744 Msa0901090:intron 40.0%
AGACCTAGAGATTAGTGAGT+TGG + chr6_1:97338859-97338878 Msa0901090:intron 40.0%
TTGCTCTGTTGGTGTGTATT+TGG + chr6_1:97339117-97339136 Msa0901090:intron 40.0%
!! ACAATTGGTTCCACTTTTGG+AGG - chr6_1:97339402-97339421 None:intergenic 40.0%
! AATTGACTCAGCAATCGGTT+AGG - chr6_1:97339642-97339661 None:intergenic 40.0%
!! GAAAGGACTTGTTGATACTC+TGG + chr6_1:97339735-97339754 Msa0901090:intron 40.0%
AAATTCCGCTACGCTTTAGT+GGG - chr6_1:97340100-97340119 None:intergenic 40.0%
ATGTTGTCAATCACTGGTAG+CGG - chr6_1:97340227-97340246 None:intergenic 40.0%
!!! GAAGAAATGGTTGGCTTTTC+AGG + chr6_1:97340456-97340475 Msa0901090:CDS 40.0%
! AACTGTGGATTACCCAAAAC+CGG - chr6_1:97340577-97340596 None:intergenic 40.0%
CACAATTAGAAAAGAGGGAG+TGG + chr6_1:97340683-97340702 Msa0901090:intron 40.0%
AGCAAGGTAAAGCCAATTTG+AGG - chr6_1:97340844-97340863 None:intergenic 40.0%
TGAAAGATGCAAAGTCAGCA+AGG - chr6_1:97340860-97340879 None:intergenic 40.0%
TCGTCATACGGTATGTATGT+GGG - chr6_1:97340885-97340904 None:intergenic 40.0%
ATCGTCATACGGTATGTATG+TGG - chr6_1:97340886-97340905 None:intergenic 40.0%
!!! TCTTTTTTCTTTGACACGGG+CGG + chr6_1:97340918-97340937 Msa0901090:CDS 40.0%
CCTAGTTTAATCAAGTCAGC+AGG - chr6_1:97341214-97341233 None:intergenic 40.0%
!! CCTGCTGACTTGATTAAACT+AGG + chr6_1:97341211-97341230 Msa0901090:intron 40.0%
!! ATCCATAGATGGCTTTAGAG+GGG - chr6_1:97341635-97341654 None:intergenic 40.0%
! AATCGCTGAACTTTTCCTTG+AGG + chr6_1:97342060-97342079 Msa0901090:CDS 40.0%
! ATCGCTGAACTTTTCCTTGA+GGG + chr6_1:97342061-97342080 Msa0901090:CDS 40.0%
GAGACAGTTCAAATAGTGGT+TGG - chr6_1:97342087-97342106 None:intergenic 40.0%
CTCCAATGGTCCCATTAATA+AGG + chr6_1:97342188-97342207 Msa0901090:intron 40.0%
CCAATGGTCCCATTAATAAG+GGG + chr6_1:97342190-97342209 Msa0901090:intron 40.0%
AGGTGGAACCCCTTATTAAT+GGG - chr6_1:97342201-97342220 None:intergenic 40.0%
TTGGTGCAGATACCAGATAT+TGG + chr6_1:97342270-97342289 Msa0901090:intron 40.0%
ATCTTGCGGATTCCAATATC+TGG - chr6_1:97342285-97342304 None:intergenic 40.0%
TCATGTGCTGAATCATCTTG+CGG - chr6_1:97342299-97342318 None:intergenic 40.0%
! TGCATGATTTTTACCGTTGC+TGG + chr6_1:97342409-97342428 Msa0901090:CDS 40.0%
CATATACCCTCATATCGGAA+TGG - chr6_1:97342443-97342462 None:intergenic 40.0%
TTTGTGGGAACAATCTATGC+AGG + chr6_1:97342534-97342553 Msa0901090:intron 40.0%
!! TGGAGAACTTTTGGAAGAGA+TGG + chr6_1:97342639-97342658 Msa0901090:CDS 40.0%
AAAAGAGAGGACATAGGCAA+AGG + chr6_1:97342700-97342719 Msa0901090:CDS 40.0%
CTAAAAAGTTTGCAGTCTCC+TGG + chr6_1:97342856-97342875 Msa0901090:CDS 40.0%
GTCCGAATATGATAGTCAGT+CGG + chr6_1:97342969-97342988 Msa0901090:CDS 40.0%
GATAGTCAGTCGGATACATT+TGG + chr6_1:97342979-97342998 Msa0901090:CDS 40.0%
ACCCTTTCTACCATTACGAA+AGG + chr6_1:97343005-97343024 Msa0901090:CDS 40.0%
TACTATGAGATGTGAAGGCA+TGG + chr6_1:97343029-97343048 Msa0901090:CDS 40.0%
! TACCTTCTGATGGCTTGTAA+TGG - chr6_1:97343200-97343219 None:intergenic 40.0%
TTAGTTCATCTGCAATGCCT+TGG + chr6_1:97343310-97343329 Msa0901090:CDS 40.0%
TAGTTCATCTGCAATGCCTT+GGG + chr6_1:97343311-97343330 Msa0901090:CDS 40.0%
!! CTTTGGTGATGCAACTGAAT+TGG - chr6_1:97343367-97343386 None:intergenic 40.0%
! TGCATCACCAAAGCTATTTC+AGG + chr6_1:97343374-97343393 Msa0901090:CDS 40.0%
! GTCTCATTTTCCTTAGGATC+TGG - chr6_1:97343452-97343471 None:intergenic 40.0%
! AAGGCTGTCTCATTTTCCTT+AGG - chr6_1:97343458-97343477 None:intergenic 40.0%
! ACTACCCAAGCTGATTTATC+AGG + chr6_1:97343552-97343571 Msa0901090:CDS 40.0%
!!! CAGCTTTTTTGTGAGTGCAT+CGG + chr6_1:97343695-97343714 Msa0901090:CDS 40.0%
GTCAAAGCTAACTTATCACC+TGG + chr6_1:97343776-97343795 Msa0901090:CDS 40.0%
AAAGCTAACTTATCACCTGG+AGG + chr6_1:97343779-97343798 Msa0901090:CDS 40.0%
AAGCTAACTTATCACCTGGA+GGG + chr6_1:97343780-97343799 Msa0901090:CDS 40.0%
CTCTGTGATATCAGCAATAC+CGG - chr6_1:97343937-97343956 None:intergenic 40.0%
ACAGAGAAGGATACCAAAGA+AGG + chr6_1:97343951-97343970 Msa0901090:CDS 40.0%
ATGTATAACACCCAGAACTG+TGG + chr6_1:97344020-97344039 Msa0901090:CDS 40.0%
TAGATGAATGCCACAGTTCT+GGG - chr6_1:97344033-97344052 None:intergenic 40.0%
ATAGATGAATGCCACAGTTC+TGG - chr6_1:97344034-97344053 None:intergenic 40.0%
AGAACTGTGGCATTCATCTA+TGG + chr6_1:97344033-97344052 Msa0901090:CDS 40.0%
GAACTGTGGCATTCATCTAT+GGG + chr6_1:97344034-97344053 Msa0901090:CDS 40.0%
CGAGGTCAAATTCCAATTCT+TGG + chr6_1:97344060-97344079 Msa0901090:CDS 40.0%
GATACAAACCAGTTGGAACA+AGG - chr6_1:97344137-97344156 None:intergenic 40.0%
!! TGTTCCAACTGGTTTGTATC+AGG + chr6_1:97344137-97344156 Msa0901090:CDS 40.0%
!! GTTCCAACTGGTTTGTATCA+GGG + chr6_1:97344138-97344157 Msa0901090:CDS 40.0%
! CTAGGGGTGTAATTACACTT+TGG + chr6_1:97344165-97344184 Msa0901090:CDS 40.0%
!! GTTGAAGACAGAGAAGCATT+TGG - chr6_1:97344275-97344294 None:intergenic 40.0%
GTGGAAAACCATAACTTCTC+TGG - chr6_1:97344479-97344498 None:intergenic 40.0%
! TCTTGTATGAACAGGTACTG+AGG + chr6_1:97344631-97344650 Msa0901090:intron 40.0%
AGAAATGTCCGATATGCCTT+GGG + chr6_1:97344677-97344696 Msa0901090:CDS 40.0%
CTTACTTGAAGGTTTAGCCA+AGG - chr6_1:97344703-97344722 None:intergenic 40.0%
CTTGGATCTGACTGAAAAGT+TGG - chr6_1:97344726-97344745 None:intergenic 40.0%
TTGCGGTTAACATTTCGTCT+TGG - chr6_1:97344744-97344763 None:intergenic 40.0%
! CAAATGCAGTAGCTTTTGTC+AGG - chr6_1:97344973-97344992 None:intergenic 40.0%
GACAAAAGCTACTGCATTTG+TGG + chr6_1:97344973-97344992 Msa0901090:CDS 40.0%
CGTCATTTCCAACTCCTTTA+AGG - chr6_1:97345005-97345024 None:intergenic 40.0%
!!! TTTTGGAGTGCAAGTTGTAC+AGG + chr6_1:97345047-97345066 Msa0901090:CDS 40.0%
AAAACAATCACTGGGGTAAC+AGG - chr6_1:97345144-97345163 None:intergenic 40.0%
TACTCTCAAGTGGTAGAGAT+GGG + chr6_1:97345421-97345440 Msa0901090:CDS 40.0%
GTACAGTTCTACTAGCTACT+AGG - chr6_1:97345512-97345531 None:intergenic 40.0%
! TTCTCTTAATTTGGGGGCTA+GGG + chr6_1:97345607-97345626 Msa0901090:three_prime_UTR 40.0%
TCATCGTTGAAATCACCAAC+AGG - chr6_1:97345653-97345672 None:intergenic 40.0%
GTCATTCGATCAACATCAGA+TGG - chr6_1:97346164-97346183 None:intergenic 40.0%
!! CAAAAAGGGCATTCAGACAT+CGG - chr6_1:97346189-97346208 None:intergenic 40.0%
TAGTTGTCAAACTTGTGCTG+GGG - chr6_1:97346824-97346843 None:intergenic 40.0%
GATAGTTGTCAAACTTGTGC+TGG - chr6_1:97346826-97346845 None:intergenic 40.0%
TGCAAAACTTGTCTTGGCTT+TGG - chr6_1:97346867-97346886 None:intergenic 40.0%
AATCCAACAGGATTTCGAAC+TGG + chr6_1:97346942-97346961 Msa0901090:three_prime_UTR 40.0%
TGAACGTCGTGTTGAAAAAG+CGG + chr6_1:97347233-97347252 Msa0901090:three_prime_UTR 40.0%
ACTGAAGTTCCAAAAGTAGG+AGG + chr6_1:97347336-97347355 Msa0901090:three_prime_UTR 40.0%
CTGAAGTTCCAAAAGTAGGA+GGG + chr6_1:97347337-97347356 Msa0901090:three_prime_UTR 40.0%
GTAGGAGGGAAATATAGTGT+TGG + chr6_1:97347351-97347370 Msa0901090:three_prime_UTR 40.0%
GCAGGACTTATTATGTGTCT+TGG - chr6_1:97347410-97347429 None:intergenic 40.0%
TTATACACAACACAGTCTGC+AGG - chr6_1:97347428-97347447 None:intergenic 40.0%
TTTCTAACTGAGGTCCCGTT+TGG + chr6_1:97337506-97337525 Msa0901090:intron 45.0%
ATCGATCCATAATCGCGATG+GGG + chr6_1:97337811-97337830 Msa0901090:CDS 45.0%
TTTGTTCCCCATCGCGATTA+TGG - chr6_1:97337820-97337839 None:intergenic 45.0%
!! ACGTTGATGGTAACTCGTGT+AGG - chr6_1:97337881-97337900 None:intergenic 45.0%
CTGAAAGAAGTTCTTGGACG+CGG + chr6_1:97337912-97337931 Msa0901090:CDS 45.0%
ATCTTTCGGAGTATGAACGG+AGG + chr6_1:97338018-97338037 Msa0901090:CDS 45.0%
!! TCCTCATGTTTGGCCTTTTC+AGG + chr6_1:97338079-97338098 Msa0901090:CDS 45.0%
ACCTGAAAAGGCCAAACATG+AGG - chr6_1:97338083-97338102 None:intergenic 45.0%
TCCGCTGAAAATTGTGGTTG+TGG + chr6_1:97338671-97338690 Msa0901090:intron 45.0%
GAAAATTGTGGTTGTGGTGC+CGG + chr6_1:97338677-97338696 Msa0901090:intron 45.0%
! TTAGGTGGTTTGGCATGTAG+CGG + chr6_1:97338740-97338759 Msa0901090:intron 45.0%
ATGGCATGTCGTCAAATCAC+CGG + chr6_1:97338791-97338810 Msa0901090:intron 45.0%
TCTAAGTCAGTTTGGTCGCA+TGG - chr6_1:97338928-97338947 None:intergenic 45.0%
! ATGCGACCAAACTGACTTAG+AGG + chr6_1:97338927-97338946 Msa0901090:intron 45.0%
! TGCGACCAAACTGACTTAGA+GGG + chr6_1:97338928-97338947 Msa0901090:intron 45.0%
ATTGCCCCTCTAAGTCAGTT+TGG - chr6_1:97338936-97338955 None:intergenic 45.0%
CAAATTCCGCTACGCTTTAG+TGG - chr6_1:97340101-97340120 None:intergenic 45.0%
TGTAAAACAGAGCCACGAGA+AGG + chr6_1:97340606-97340625 Msa0901090:CDS 45.0%
GTAAAACAGAGCCACGAGAA+GGG + chr6_1:97340607-97340626 Msa0901090:CDS 45.0%
TTAGAAAAGAGGGAGTGGAG+TGG + chr6_1:97340688-97340707 Msa0901090:intron 45.0%
CGGAAGAAGACTCTGTTATC+TGG + chr6_1:97340938-97340957 Msa0901090:CDS 45.0%
AAGGAAAAGGATCCAACCTC+AGG - chr6_1:97340966-97340985 None:intergenic 45.0%
!! TTCCCCTCTAAAGCCATCTA+TGG + chr6_1:97341630-97341649 Msa0901090:CDS 45.0%
GTATGTCTGCAAAACCACAC+TGG - chr6_1:97341960-97341979 None:intergenic 45.0%
AACTTCTTGCGTATCGCAGA+GGG + chr6_1:97342107-97342126 Msa0901090:CDS 45.0%
CCCCTTATTAATGGGACCAT+TGG - chr6_1:97342193-97342212 None:intergenic 45.0%
CAGGTGGAACCCCTTATTAA+TGG - chr6_1:97342202-97342221 None:intergenic 45.0%
CATTAATAAGGGGTTCCACC+TGG + chr6_1:97342200-97342219 Msa0901090:intron 45.0%
TCAGCAGAAAATCGAGACTC+TGG - chr6_1:97342333-97342352 None:intergenic 45.0%
TCCTCTCCATTCCGATATGA+GGG + chr6_1:97342434-97342453 Msa0901090:CDS 45.0%
AAACAGTCATCCGATGATGC+AGG + chr6_1:97342607-97342626 Msa0901090:CDS 45.0%
!! TGTGACCTCTGGAGAACTTT+TGG + chr6_1:97342630-97342649 Msa0901090:CDS 45.0%
CTCTTCCAAAAGTTCTCCAG+AGG - chr6_1:97342638-97342657 None:intergenic 45.0%
CATGAAACTCGCGCTTTCTT+TGG - chr6_1:97342668-97342687 None:intergenic 45.0%
! CAAAGAAAGCGCGAGTTTCA+TGG + chr6_1:97342666-97342685 Msa0901090:CDS 45.0%
CGAAGGAAAAGAGAGGACAT+AGG + chr6_1:97342694-97342713 Msa0901090:CDS 45.0%
GCATTTCCTATTCCTTGCTG+AGG - chr6_1:97342811-97342830 None:intergenic 45.0%
! ATAGTTTGAAGCAGCTCACC+AGG - chr6_1:97342877-97342896 None:intergenic 45.0%
CAACTTGACATTGCGTATGC+AGG - chr6_1:97343079-97343098 None:intergenic 45.0%
! ATGTCAAGTTGCCTCACCTA+AGG + chr6_1:97343088-97343107 Msa0901090:CDS 45.0%
CTCCATTACAAGCCATCAGA+AGG + chr6_1:97343195-97343214 Msa0901090:CDS 45.0%
TCCTTTAGTGTGGACAGAAG+AGG + chr6_1:97343231-97343250 Msa0901090:CDS 45.0%
TCCTCTTCTGTCCACACTAA+AGG - chr6_1:97343235-97343254 None:intergenic 45.0%
TAGTGTGGACAGAAGAGGAA+TGG + chr6_1:97343236-97343255 Msa0901090:CDS 45.0%
AGTGTGGACAGAAGAGGAAT+GGG + chr6_1:97343237-97343256 Msa0901090:CDS 45.0%
AATGGAGAATCAGAAGCTGC+AGG - chr6_1:97343270-97343289 None:intergenic 45.0%
TTGCTAAGGGGATTAACCCA+AGG - chr6_1:97343330-97343349 None:intergenic 45.0%
TTCTAAACAGTTCCACCGAG+TGG + chr6_1:97343418-97343437 Msa0901090:intron 45.0%
! GATTTGGGATTCCAGAAAGC+TGG + chr6_1:97343734-97343753 Msa0901090:CDS 45.0%
TTATGTGTAGCGATGCTTCC+AGG + chr6_1:97343813-97343832 Msa0901090:CDS 45.0%
! GTGATAGTTGGAGCATCTGA+TGG + chr6_1:97343846-97343865 Msa0901090:CDS 45.0%
!! ACCAAAGAAGGTGCCATACT+TGG + chr6_1:97343963-97343982 Msa0901090:CDS 45.0%
! TGGCCTTTTAAATTGCCCCA+TGG + chr6_1:97343983-97344002 Msa0901090:CDS 45.0%
GCATTCATCTATGGGATACG+AGG + chr6_1:97344042-97344061 Msa0901090:CDS 45.0%
TTAAAAGCTACTCCCCACGA+GGG + chr6_1:97344086-97344105 Msa0901090:CDS 45.0%
GTTTGTATCAGGGTCGTCTA+GGG + chr6_1:97344148-97344167 Msa0901090:CDS 45.0%
TTTGTATCAGGGTCGTCTAG+GGG + chr6_1:97344149-97344168 Msa0901090:CDS 45.0%
!! GAAGACAGAGAAGCATTTGG+AGG - chr6_1:97344272-97344291 None:intergenic 45.0%
CTTCTCTGTCTTCAACCACT+AGG + chr6_1:97344279-97344298 Msa0901090:CDS 45.0%
AGAAACTTCATTGCAACCCG+CGG - chr6_1:97344321-97344340 None:intergenic 45.0%
GATAGAACTAGGTCTTGCTC+TGG - chr6_1:97344423-97344442 None:intergenic 45.0%
CAAAAGGAGGTAAAGGTCAG+TGG - chr6_1:97344498-97344517 None:intergenic 45.0%
GGCATCATCAAATCAGCTCA+TGG - chr6_1:97344563-97344582 None:intergenic 45.0%
!! GTATGAACAGGTACTGAGGA+CGG + chr6_1:97344635-97344654 Msa0901090:intron 45.0%
CAGAAATGTCCGATATGCCT+TGG + chr6_1:97344676-97344695 Msa0901090:CDS 45.0%
GCTCATCAACTCTGTACTTG+CGG - chr6_1:97344761-97344780 None:intergenic 45.0%
TACGTCGATGGGATCATTAC+AGG + chr6_1:97344871-97344890 Msa0901090:CDS 45.0%
GGACCAAACCTTAAAGGAGT+TGG + chr6_1:97344994-97345013 Msa0901090:CDS 45.0%
GTCATTGGAAAACACTGGAC+TGG - chr6_1:97345113-97345132 None:intergenic 45.0%
! ACTGGGGTAACAGGAGATTT+TGG - chr6_1:97345135-97345154 None:intergenic 45.0%
!! AATTGCCTTTGGTGTCAGCT+TGG - chr6_1:97345316-97345335 None:intergenic 45.0%
CATCTCTACCACTTGAGAGT+AGG - chr6_1:97345422-97345441 None:intergenic 45.0%
CTACTCTCAAGTGGTAGAGA+TGG + chr6_1:97345420-97345439 Msa0901090:CDS 45.0%
ACTCTCAAGTGGTAGAGATG+GGG + chr6_1:97345422-97345441 Msa0901090:CDS 45.0%
! CTTCTCTTAATTTGGGGGCT+AGG + chr6_1:97345606-97345625 Msa0901090:three_prime_UTR 45.0%
TGGACTAACGACTGGATTTG+AGG + chr6_1:97346432-97346451 Msa0901090:three_prime_UTR 45.0%
! TGGGGAGTTTTTGCGTGATA+CGG - chr6_1:97346806-97346825 None:intergenic 45.0%
TTGCCAGTTCGAAATCCTGT+TGG - chr6_1:97346948-97346967 None:intergenic 45.0%
CCTTCTTCAAAGTCTCCTGT+TGG - chr6_1:97347170-97347189 None:intergenic 45.0%
! CCAACAGGAGACTTTGAAGA+AGG + chr6_1:97347167-97347186 Msa0901090:intron 45.0%
! TGGAGCTTTAGCAGTTGTCT+TGG - chr6_1:97347298-97347317 None:intergenic 45.0%
ACACTCCCCATCCATAAATG+AGG - chr6_1:97347564-97347583 None:intergenic 45.0%
!! AAAAAATAAAAAAAAATAAG+TGG - chr6_1:97340496-97340515 None:intergenic 5.0%
!!! ATCAATTTTTAAAAATATAA+AGG - chr6_1:97346354-97346373 None:intergenic 5.0%
AACGACGCAAGTATCAGCGT+CGG + chr6_1:97337848-97337867 Msa0901090:CDS 50.0%
CTAAGCATACAGTGACGCAC+CGG - chr6_1:97338699-97338718 None:intergenic 50.0%
! GCGACCAAACTGACTTAGAG+GGG + chr6_1:97338929-97338948 Msa0901090:intron 50.0%
!! AGCGGATTGCGGAACAATAG+CGG - chr6_1:97340130-97340149 None:intergenic 50.0%
CATGACAAACTCCCTTCTCG+TGG - chr6_1:97340621-97340640 None:intergenic 50.0%
CACGAGAAGGGAGTTTGTCA+TGG + chr6_1:97340619-97340638 Msa0901090:CDS 50.0%
ACTCTGTTATCTGGCACCTG+AGG + chr6_1:97340947-97340966 Msa0901090:CDS 50.0%
TGTTATCTGGCACCTGAGGT+TGG + chr6_1:97340951-97340970 Msa0901090:intron 50.0%
TTCAGCAGTGACACACTGGA+AGG - chr6_1:97341476-97341495 None:intergenic 50.0%
TGAAAATGGAGGGGAGATGC+AGG + chr6_1:97341597-97341616 Msa0901090:CDS 50.0%
GTTCAGCGATTACACACCTG+AGG - chr6_1:97342051-97342070 None:intergenic 50.0%
! CAAATAGTGGTTGGCCCTCA+AGG - chr6_1:97342078-97342097 None:intergenic 50.0%
CAACTTCTTGCGTATCGCAG+AGG + chr6_1:97342106-97342125 Msa0901090:CDS 50.0%
AATGGAGAGGACTCCAGCAA+CGG - chr6_1:97342425-97342444 None:intergenic 50.0%
GTCCTCTCCATTCCGATATG+AGG + chr6_1:97342433-97342452 Msa0901090:CDS 50.0%
ACCCTCATATCGGAATGGAG+AGG - chr6_1:97342438-97342457 None:intergenic 50.0%
! ACTATGCCAGAGTGCTTTCC+AGG + chr6_1:97342561-97342580 Msa0901090:CDS 50.0%
!! GTATCTCCTGGAAAGCACTC+TGG - chr6_1:97342570-97342589 None:intergenic 50.0%
AGAGGTCACACCTGCATCAT+CGG - chr6_1:97342620-97342639 None:intergenic 50.0%
CGAGTTTCATGGACTCACGA+AGG + chr6_1:97342677-97342696 Msa0901090:CDS 50.0%
GGACTCACGAAGGAAAAGAG+AGG + chr6_1:97342687-97342706 Msa0901090:CDS 50.0%
! TCAAGTTGCCTCACCTAAGG+AGG + chr6_1:97343091-97343110 Msa0901090:CDS 50.0%
CAAGTTGCCTCACCTAAGGA+GGG + chr6_1:97343092-97343111 Msa0901090:CDS 50.0%
GGCAGCTGTACTCTTGTTGA+AGG + chr6_1:97343113-97343132 Msa0901090:CDS 50.0%
! GATCTGGTTCGTGTACCACT+CGG - chr6_1:97343436-97343455 None:intergenic 50.0%
GGTACACGAACCAGATCCTA+AGG + chr6_1:97343439-97343458 Msa0901090:intron 50.0%
CATCCATCCCTGATTCTGGT+TGG + chr6_1:97343595-97343614 Msa0901090:CDS 50.0%
! AACTGCTGTGTCACTGACTG+CGG - chr6_1:97343664-97343683 None:intergenic 50.0%
GCATCGCTACACATAACGCA+TGG - chr6_1:97343809-97343828 None:intergenic 50.0%
TGTAGCGATGCTTCCAGGTT+CGG + chr6_1:97343818-97343837 Msa0901090:CDS 50.0%
ACTATCACTTGTGCCGAACC+TGG - chr6_1:97343834-97343853 None:intergenic 50.0%
GGTTCGGCACAAGTGATAGT+TGG + chr6_1:97343834-97343853 Msa0901090:CDS 50.0%
GCCAAGTATGGCACCTTCTT+TGG - chr6_1:97343967-97343986 None:intergenic 50.0%
GTTAAAAGCTACTCCCCACG+AGG + chr6_1:97344085-97344104 Msa0901090:CDS 50.0%
TACGCCTTATCCCTAGCATC+AGG + chr6_1:97344110-97344129 Msa0901090:CDS 50.0%
ACGCCTTATCCCTAGCATCA+GGG + chr6_1:97344111-97344130 Msa0901090:CDS 50.0%
CGACCCTGATACAAACCAGT+TGG - chr6_1:97344144-97344163 None:intergenic 50.0%
GGTTTGTATCAGGGTCGTCT+AGG + chr6_1:97344147-97344166 Msa0901090:CDS 50.0%
!! GAGAAGCATTTGGAGGAGGA+AGG - chr6_1:97344265-97344284 None:intergenic 50.0%
!! GACAGAGAAGCATTTGGAGG+AGG - chr6_1:97344269-97344288 None:intergenic 50.0%
CACATAAACAAGGGGCCTAG+TGG - chr6_1:97344297-97344316 None:intergenic 50.0%
! CACTAGGCCCCTTGTTTATG+TGG + chr6_1:97344295-97344314 Msa0901090:CDS 50.0%
AGTAAATCACCCCCTGGCAA+GGG - chr6_1:97344828-97344847 None:intergenic 50.0%
TGCAACCAAGCTGACACCAA+AGG + chr6_1:97345308-97345327 Msa0901090:CDS 50.0%
GCAGCTGCAAGAATTGCCTT+TGG - chr6_1:97345327-97345346 None:intergenic 50.0%
ATGGCAACTTGCCGAATCAG+TGG - chr6_1:97345352-97345371 None:intergenic 50.0%
CACTTGAGAGTAGGAGTCTC+TGG - chr6_1:97345413-97345432 None:intergenic 50.0%
CAGAGACTCCTACTCTCAAG+TGG + chr6_1:97345411-97345430 Msa0901090:CDS 50.0%
GTGTGTGTGCGCGCATAAAT+AGG - chr6_1:97345704-97345723 None:intergenic 50.0%
! GGGAGTTTTTGCGTGATACG+GGG - chr6_1:97346804-97346823 None:intergenic 50.0%
! GGGGAGTTTTTGCGTGATAC+GGG - chr6_1:97346805-97346824 None:intergenic 50.0%
GTTGTCTTGGCTGTCTGCTT+TGG - chr6_1:97347318-97347337 None:intergenic 50.0%
GTTCGGGAAGAGGGTCCATT+TGG - chr6_1:97337724-97337743 None:intergenic 55.0%
GCATGTCGTCAAATCACCGG+CGG + chr6_1:97338794-97338813 Msa0901090:intron 55.0%
TGGGACAGCGCCAATATAGC+TGG - chr6_1:97340081-97340100 None:intergenic 55.0%
GCTGTCCCACTAAAGCGTAG+CGG + chr6_1:97340092-97340111 Msa0901090:intron 55.0%
AAGAGGGAGTGGAGTGGAGA+AGG + chr6_1:97340694-97340713 Msa0901090:intron 55.0%
GCACTTCAGCAGTGACACAC+TGG - chr6_1:97341480-97341499 None:intergenic 55.0%
AAATGGAGGGGAGATGCAGG+TGG + chr6_1:97341600-97341619 Msa0901090:CDS 55.0%
TCTGGGTCATGAGTATGGCC+AGG - chr6_1:97342221-97342240 None:intergenic 55.0%
GATGATGCAGGTGTGACCTC+TGG + chr6_1:97342619-97342638 Msa0901090:CDS 55.0%
ATTCCTTGCTGAGGACCAGC+TGG - chr6_1:97342802-97342821 None:intergenic 55.0%
GCTGGTCCTCAGCAAGGAAT+AGG + chr6_1:97342802-97342821 Msa0901090:CDS 55.0%
AGAGTACAGCTGCCCTCCTT+AGG - chr6_1:97343107-97343126 None:intergenic 55.0%
GGAGAATCAGAAGCTGCAGG+AGG - chr6_1:97343267-97343286 None:intergenic 55.0%
CGGACATCCATCCCTGATTC+TGG + chr6_1:97343591-97343610 Msa0901090:CDS 55.0%
CCTCCAACCAGAATCAGGGA+TGG - chr6_1:97343601-97343620 None:intergenic 55.0%
! CCATCCCTGATTCTGGTTGG+AGG + chr6_1:97343598-97343617 Msa0901090:CDS 55.0%
! CTGTGTCACTGACTGCGGAA+CGG - chr6_1:97343659-97343678 None:intergenic 55.0%
ATAACGCATGGCTTCCCTCC+AGG - chr6_1:97343797-97343816 None:intergenic 55.0%
AGGCCCTGATGCTAGGGATA+AGG - chr6_1:97344117-97344136 None:intergenic 55.0%
GGAACAAGGCCCTGATGCTA+GGG - chr6_1:97344123-97344142 None:intergenic 55.0%
TGGAACAAGGCCCTGATGCT+AGG - chr6_1:97344124-97344143 None:intergenic 55.0%
!! CATCAGGGCCTTGTTCCAAC+TGG + chr6_1:97344126-97344145 Msa0901090:CDS 55.0%
ACCCGCGGCCACATAAACAA+GGG - chr6_1:97344306-97344325 None:intergenic 55.0%
AACCCGCGGCCACATAAACA+AGG - chr6_1:97344307-97344326 None:intergenic 55.0%
AGAGAATGCTAGCTGCCACC+AGG + chr6_1:97344352-97344371 Msa0901090:CDS 55.0%
ATGCTAGCTGCCACCAGGTA+TGG + chr6_1:97344357-97344376 Msa0901090:intron 55.0%
AGCCAAGGCCCAAGGCATAT+CGG - chr6_1:97344688-97344707 None:intergenic 55.0%
GAAGGTTTAGCCAAGGCCCA+AGG - chr6_1:97344696-97344715 None:intergenic 55.0%
GTGCGAATACCAGGAAGACG+CGG - chr6_1:97344798-97344817 None:intergenic 55.0%
GGAAGCAGTGTGCGAATACC+AGG - chr6_1:97344807-97344826 None:intergenic 55.0%
CAGTAAATCACCCCCTGGCA+AGG - chr6_1:97344829-97344848 None:intergenic 55.0%
CCAGTCAGTAAATCACCCCC+TGG - chr6_1:97344834-97344853 None:intergenic 55.0%
CCAGGGGGTGATTTACTGAC+TGG + chr6_1:97344831-97344850 Msa0901090:CDS 55.0%
GGTGTCAGCTTGGTTGCAAG+AGG - chr6_1:97345306-97345325 None:intergenic 55.0%
! TGCAGCTGCTGCCACTGATT+CGG + chr6_1:97345338-97345357 Msa0901090:CDS 55.0%
TGGTAGAGATGGGGCCATCA+AGG + chr6_1:97345431-97345450 Msa0901090:CDS 55.0%
GAGATGGGGCCATCAAGGTT+TGG + chr6_1:97345436-97345455 Msa0901090:CDS 55.0%
CGGGGCTAAGCGGTAAGAAT+CGG - chr6_1:97346786-97346805 None:intergenic 55.0%
TTGCGTGATACGGGGCTAAG+CGG - chr6_1:97346796-97346815 None:intergenic 55.0%
GGGTCATGAGTATGGCCAGG+TGG - chr6_1:97342218-97342237 None:intergenic 60.0%
AGTCCAGCTGGTCCTCAGCA+AGG + chr6_1:97342796-97342815 Msa0901090:CDS 60.0%
ACAGCTGCCCTCCTTAGGTG+AGG - chr6_1:97343102-97343121 None:intergenic 60.0%
! CTGGTTCGTGTACCACTCGG+TGG - chr6_1:97343433-97343452 None:intergenic 60.0%
GCGGCCTCCAACCAGAATCA+GGG - chr6_1:97343605-97343624 None:intergenic 60.0%
! ATTCTGGTTGGAGGCCGCGT+GGG + chr6_1:97343607-97343626 Msa0901090:CDS 60.0%
AGTGCAACCAACACCCCACG+CGG - chr6_1:97343624-97343643 None:intergenic 60.0%
!! GGTGTTGGTTGCACTCCTCC+AGG + chr6_1:97343629-97343648 Msa0901090:CDS 60.0%
GATAAGGCGTAGCCCTCGTG+GGG - chr6_1:97344101-97344120 None:intergenic 60.0%
GGATAAGGCGTAGCCCTCGT+GGG - chr6_1:97344102-97344121 None:intergenic 60.0%
! GCCCCTTGTTTATGTGGCCG+CGG + chr6_1:97344301-97344320 Msa0901090:CDS 60.0%
CCCGCGGCCACATAAACAAG+GGG - chr6_1:97344305-97344324 None:intergenic 60.0%
! CCCCTTGTTTATGTGGCCGC+GGG + chr6_1:97344302-97344321 Msa0901090:CDS 60.0%
GTCCGATATGCCTTGGGCCT+TGG + chr6_1:97344683-97344702 Msa0901090:CDS 60.0%
ATACCAGGAAGACGCGGAGG+AGG - chr6_1:97344792-97344811 None:intergenic 60.0%
CGAATACCAGGAAGACGCGG+AGG - chr6_1:97344795-97344814 None:intergenic 60.0%
GCACACTGCTTCCCTTGCCA+GGG + chr6_1:97344814-97344833 Msa0901090:CDS 60.0%
CACACTGCTTCCCTTGCCAG+GGG + chr6_1:97344815-97344834 Msa0901090:CDS 60.0%
ACACTGCTTCCCTTGCCAGG+GGG + chr6_1:97344816-97344835 Msa0901090:CDS 60.0%
CGTCAAATCACCGGCGGCAG+AGG + chr6_1:97338800-97338819 Msa0901090:intron 65.0%
GCTAGGTCTTCCTCTGCCGC+CGG - chr6_1:97338813-97338832 None:intergenic 65.0%
CGCGGCCTCCAACCAGAATC+AGG - chr6_1:97343606-97343625 None:intergenic 65.0%
! GATTCTGGTTGGAGGCCGCG+TGG + chr6_1:97343606-97343625 Msa0901090:CDS 65.0%
! TTCTGGTTGGAGGCCGCGTG+GGG + chr6_1:97343608-97343627 Msa0901090:CDS 65.0%
TGACTGCGGAACGGAGCTCC+TGG - chr6_1:97343650-97343669 None:intergenic 65.0%
GGGATAAGGCGTAGCCCTCG+TGG - chr6_1:97344103-97344122 None:intergenic 65.0%
GAACCTCCTCCGCGTCTTCC+TGG + chr6_1:97344786-97344805 Msa0901090:CDS 65.0%
CGCACACTGCTTCCCTTGCC+AGG + chr6_1:97344813-97344832 Msa0901090:CDS 65.0%
TTGGAGGCCGCGTGGGGTGT+TGG + chr6_1:97343614-97343633 Msa0901090:CDS 70.0%
CTGCGGAACGGAGCTCCTGG+AGG - chr6_1:97343647-97343666 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 97337461 97347641 97337461 ID=Msa0901090;Name=Msa0901090
chr6_1 mRNA 97337461 97347641 97337461 ID=Msa0901090-mRNA-1;Parent=Msa0901090;Name=Msa0901090-mRNA-1;_AED=0.05;_eAED=0.05;_QI=75|0.92|0.85|1|0.92|0.78|14|2045|1084
chr6_1 exon 97337461 97337523 97337461 ID=Msa0901090-mRNA-1:exon:17048;Parent=Msa0901090-mRNA-1
chr6_1 exon 97337741 97338100 97337741 ID=Msa0901090-mRNA-1:exon:17049;Parent=Msa0901090-mRNA-1
chr6_1 exon 97340355 97340477 97340355 ID=Msa0901090-mRNA-1:exon:17050;Parent=Msa0901090-mRNA-1
chr6_1 exon 97340595 97340640 97340595 ID=Msa0901090-mRNA-1:exon:17051;Parent=Msa0901090-mRNA-1
chr6_1 exon 97340808 97340968 97340808 ID=Msa0901090-mRNA-1:exon:17052;Parent=Msa0901090-mRNA-1
chr6_1 exon 97341589 97341668 97341589 ID=Msa0901090-mRNA-1:exon:17053;Parent=Msa0901090-mRNA-1
chr6_1 exon 97342054 97342159 97342054 ID=Msa0901090-mRNA-1:exon:17054;Parent=Msa0901090-mRNA-1
chr6_1 exon 97342279 97342455 97342279 ID=Msa0901090-mRNA-1:exon:17055;Parent=Msa0901090-mRNA-1
chr6_1 exon 97342556 97343395 97342556 ID=Msa0901090-mRNA-1:exon:17056;Parent=Msa0901090-mRNA-1
chr6_1 exon 97343525 97344373 97343525 ID=Msa0901090-mRNA-1:exon:17057;Parent=Msa0901090-mRNA-1
chr6_1 exon 97344645 97344892 97344645 ID=Msa0901090-mRNA-1:exon:17058;Parent=Msa0901090-mRNA-1
chr6_1 exon 97344969 97345068 97344969 ID=Msa0901090-mRNA-1:exon:17059;Parent=Msa0901090-mRNA-1
chr6_1 exon 97345288 97347041 97345288 ID=Msa0901090-mRNA-1:exon:17060;Parent=Msa0901090-mRNA-1
chr6_1 exon 97347174 97347641 97347174 ID=Msa0901090-mRNA-1:exon:17061;Parent=Msa0901090-mRNA-1
chr6_1 five_prime_UTR 97337461 97337523 97337461 ID=Msa0901090-mRNA-1:five_prime_utr;Parent=Msa0901090-mRNA-1
chr6_1 five_prime_UTR 97337741 97337752 97337741 ID=Msa0901090-mRNA-1:five_prime_utr;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97337753 97338100 97337753 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97340355 97340477 97340355 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97340595 97340640 97340595 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97340808 97340968 97340808 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97341589 97341668 97341589 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97342054 97342159 97342054 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97342279 97342455 97342279 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97342556 97343395 97342556 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97343525 97344373 97343525 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97344645 97344892 97344645 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97344969 97345068 97344969 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 CDS 97345288 97345464 97345288 ID=Msa0901090-mRNA-1:cds;Parent=Msa0901090-mRNA-1
chr6_1 three_prime_UTR 97345465 97347041 97345465 ID=Msa0901090-mRNA-1:three_prime_utr;Parent=Msa0901090-mRNA-1
chr6_1 three_prime_UTR 97347174 97347641 97347174 ID=Msa0901090-mRNA-1:three_prime_utr;Parent=Msa0901090-mRNA-1
Gene Sequence

>Msa0901090

ATGCACACGTTCAAAGCTTCAAAGCTGTTCATCACAAAAAAAAGCGATTCCACAAATAATCGATCCATAATCGCGATGGGGAACAAAATCGCACGAACGACGCAAGTATCAGCGTCGGAGTATTACCTACACGAGTTACCATCAACGTATAATCTAGTTCTGAAAGAAGTTCTTGGACGCGGTAGATTTTTCAAATCGATTCAGTGTAAACACGATGAAGGTTTGGTTCTTGTTAAGGTTTATTTCAAACGCGGCGATTCTATTAATCTTTCGGAGTATGAACGGAGGATTTCGATGATTAAGGAGATTTTTAGTAGTATTGATCATCCTCATGTTTGGCCTTTTCAGTTTTGGCAAGATACAGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGACTAAGCACTCGACCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCACGAGAAGGGAGTTTGTCATGGTGATATCAAGTGTGAAAATGTGCTAATTACGTCCTCAAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATACCGTATGACGATCCATCTGATTTCTCTTTTTTCTTTGACACGGGCGGAAGAAGACTCTGTTATCTGGCACCTGAGAGATTTTATGAAAATGGAGGGGAGATGCAGGTGGCACAAGATTCCCCTCTAAAGCCATCTATGGATTTATTTGCTGTTGGGTGTGTAATCGCTGAACTTTTCCTTGAGGGCCAACCACTATTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGCAAGATGATTCAGCACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAATGTATCTAAAGGAATACGCTGGAGTTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTCCATTCCGATATGAGGGTTTTACTATGCCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAACAGTCATCCGATGATGCAGGTGTGACCTCTGGAGAACTTTTGGAAGAGATGGTTGCCAAAGAAAGCGCGAGTTTCATGGACTCACGAAGGAAAAGAGAGGACATAGGCAAAGGCTTAGTTCATGATCAGTATGAACTTCTTGGTGATATTAATAGCTTACTGAGGGATGCTAAAAATAATAATAAGAGTCCAGCTGGTCCTCAGCAAGGAATAGGAAATGCACAGAATTCAACCTTTCCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATATCGAATGCATTTCGAGGAAATGATCATCCCTTTTTAAAAAGTATTACTATGAAAGACTTAAATTCATTGATGTCCGAATATGATAGTCAGTCGGATACATTTGGAACACCCTTTCTACCATTACGAAAGGATACTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTAAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTGATTCCATATGTGATTCTCCATTACAAGCCATCAGAAGGTATACCATTATACTCCTTTAGTGTGGACAGAAGAGGAATGGGAAAACCTCCTGCAGCTTCTGATTCTCCATTACAAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCCCTTAGCAAGTCCTTTAATTTGGCCAATTCAGTTGCATCACCAAAGCTATTTCAGGGCACATCAATTTCACTAGAAGATGCTACTACCCAAGCTGATTTATCAGGATTTCAATCTTTTGCTCGGACATCCATCCCTGATTCTGGTTGGAGGCCGCGTGGGGTGTTGGTTGCACTCCTCCAGGAGCTCCGTTCCGCAGTCAGTGACACAGCAGTTTCTTCTGACAACAGCTTTTTTGTGAGTGCATCGGATGACTTGACAGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCATGCGTTATGTGTAGCGATGCTTCCAGGTTCGGCACAAGTGATAGTTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATTTCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCCGGTATTGCTGATATCACAGAGAAGGATACCAAAGAAGGTGCCATACTTGGCCTTTTAAATTGCCCCATGGATAATAATAGCATTATGTATAACACCCAGAACTGTGGCATTCATCTATGGGATACGAGGTCAAATTCCAATTCTTGGACGTTAAAAGCTACTCCCCACGAGGGCTACGCCTTATCCCTAGCATCAGGGCCTTGTTCCAACTGGTTTGTATCAGGGTCGTCTAGGGGTGTAATTACACTTTGGGATCTGAGATTTCTTGAACCTGTAAACTCTTGGAAGTATTCTCTTGCTTGTCCTATAGAAAAGATTTGTCTCTTCCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACCACTAGGCCCCTTGTTTATGTGGCCGCGGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGCTAGCTGCCACCAGGTACTGAGGACGGCCAATTATGACAGTGATGCAGAAATGTCCGATATGCCTTGGGCCTTGGCTAAACCTTCAAGTAAGCCAACTTTTCAGTCAGATCCAAGACGAAATGTTAACCGCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCGCGTCTTCCTGGTATTCGCACACTGCTTCCCTTGCCAGGGGGTGATTTACTGACTGGCAGCACTGATTTAAAGATACGTCGATGGGATCATTACAGACCTGACAAAAGCTACTGCATTTGTGGACCAAACCTTAAAGGAGTTGGAAATGACGATTTTTATGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAGACGGCCTCTTGCAACCAAGCTGACACCAAAGGCAATTCTTGCAGCTGCTGCCACTGATTCGGCAAGTTGCCATCATGATTCTATTGTGTCTGTGGCTTCAGTTAAGTTAAACCAGAGACTCCTACTCTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA
Protein sequence

>Msa0901090

MHTFKASKLFITKKSDSTNNRSIIAMGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSINLSEYERRISMIKEIFSSIDHPHVWPFQFWQDTDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEMQVAQDSPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEMYLKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESASFMDSRRKREDIGKGLVHDQYELLGDINSLLRDAKNNNKSPAGPQQGIGNAQNSTFPENLKSLQSPGELLQTISNAFRGNDHPFLKSITMKDLNSLMSEYDSQSDTFGTPFLPLRKDTMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVILHYKPSEGIPLYSFSVDRRGMGKPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFNLANSVASPKLFQGTSISLEDATTQADLSGFQSFARTSIPDSGWRPRGVLVALLQELRSAVSDTAVSSDNSFFVSASDDLTVKIWDSRKLEKDISFRSKLTYHLEGSHALCVAMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADITEKDTKEGAILGLLNCPMDNNSIMYNTQNCGIHLWDTRSNSNSWTLKATPHEGYALSLASGPCSNWFVSGSSRGVITLWDLRFLEPVNSWKYSLACPIEKICLFLPPPNASLSSTTRPLVYVAAGCNEVSLWNAENASCHQVLRTANYDSDAEMSDMPWALAKPSSKPTFQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGSTDLKIRRWDHYRPDKSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLATKLTPKAILAAAATDSASCHHDSIVSVASVKLNQRLLLSSGRDGAIKVWK*