AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0342810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342810 MtrunA17_Chr6g0487171 98.893 1536 17 0 1 1536 1 1536 0.0 3146
Msa0342810 MtrunA17_Chr1g0197721 24.242 231 155 4 29 252 53 270 5.28e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0342810 AT4G29380.1 68.523 1544 428 11 1 1536 1 1494 0.0 2121
Msa0342810 AT4G29380.2 65.533 1323 398 12 222 1536 1 1273 0.0 1704
Msa0342810 AT1G33770.1 28.638 213 121 10 33 236 147 337 2.54e-12 72.0
Msa0342810 AT5G04510.1 22.785 237 163 4 23 252 40 263 9.15e-11 66.6

Find 390 sgRNAs with CRISPR-Local

Find 672 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAACGGTAATTAACTAAT+TGG 0.150497 3_1:+764444 None:intergenic
TATCCATGGGGCAATTTAAA+AGG 0.198468 3_1:+766319 None:intergenic
ACTTAGTAAGTCCTTTAATT+TGG 0.211138 3_1:-766964 Msa0342810:CDS
CATGAAACTCGCGCTTTCTT+TGG 0.217749 3_1:+768942 None:intergenic
TTCTAACATGTCCGAGCTTC+TGG 0.218141 3_1:+767451 None:intergenic
AACTGAATTGGCCAAATTAA+AGG 0.221582 3_1:+766953 None:intergenic
TTCTGCATCACTGTCATAAT+TGG 0.226064 3_1:+765588 None:intergenic
TGTTCCAACTGGTTTGTATC+AGG 0.226968 3_1:-766168 Msa0342810:CDS
GAAATGGATTTACTTATAAA+AGG 0.234661 3_1:-767383 Msa0342810:CDS
GCTGAAAAGCAACAGGGTTC+TGG 0.236868 3_1:-767329 Msa0342810:CDS
TCATCATTCTCCCCGGGGTC+TGG 0.248702 3_1:+768113 None:intergenic
AAGCTTGCTCTCACTGCTTA+TGG 0.250078 3_1:-768220 Msa0342810:CDS
GTTCATCACAGTCTAAAATA+TGG 0.259563 3_1:-767406 Msa0342810:CDS
GCCAAGTATTGCACCTTCTT+TGG 0.266844 3_1:+766341 None:intergenic
AGAACTGTGGCATTCATCTA+TGG 0.268978 3_1:-766272 Msa0342810:CDS
CATGATCAGTATGAACTTCT+TGG 0.274313 3_1:-768877 Msa0342810:CDS
CTAGTTCTGAAAGAAGTTCT+TGG 0.275217 3_1:-773700 Msa0342810:CDS
TGTGACCTCTGGAGAACTTT+TGG 0.276856 3_1:-768977 Msa0342810:CDS
CAAAGCAAACGCCAAATATT+AGG 0.280826 3_1:-768018 Msa0342810:CDS
ACTATGCCAGAGTGCTTTCC+AGG 0.282997 3_1:-769046 Msa0342810:CDS
ACGGAGGATTTCGATGATTA+AGG 0.283282 3_1:-773572 Msa0342810:CDS
CGGACATCCATCCCTGATTC+TGG 0.284166 3_1:-766714 Msa0342810:CDS
CGAGGTCAAATTCCAATTCT+TGG 0.285843 3_1:-766245 Msa0342810:CDS
TGCTAATTACGTCCTCAAAT+TGG 0.288641 3_1:-770780 Msa0342810:CDS
GATCTTCATCATCAATATAT+AGG 0.292293 3_1:+768464 None:intergenic
AATGTTGTTGAGAAGTATTC+TGG 0.292840 3_1:-766390 Msa0342810:CDS
CTAATATTTGGCGTTTGCTT+TGG 0.300313 3_1:+768019 None:intergenic
ATGATCGAGATGAGCAATTA+AGG 0.306269 3_1:-767901 Msa0342810:CDS
ACTACCCAAGCTGATTTATC+AGG 0.317965 3_1:-766753 Msa0342810:CDS
ATGACTCAACAGTCAAGATT+TGG 0.319506 3_1:-766587 Msa0342810:CDS
TGAGTCTAAATTTAGAGATA+TGG 0.323032 3_1:-767246 Msa0342810:CDS
TGTTAGAGCCTTAGAATGTT+TGG 0.326974 3_1:-767762 Msa0342810:CDS
AGAAGCGCTCTCCTAATATT+TGG 0.327877 3_1:+768007 None:intergenic
AGAACTAGATTATACGTTGA+TGG 0.332572 3_1:+773715 None:intergenic
TCAACGGTAATTAACTAATT+GGG 0.335771 3_1:+764445 None:intergenic
CAATAGTTTCTCTCGAATCT+TGG 0.336566 3_1:-764396 Msa0342810:three_prime_UTR
CTGAAAAGCAACAGGGTTCT+GGG 0.336621 3_1:-767328 Msa0342810:CDS
TCCATTACAAATGAATTCTC+TGG 0.337807 3_1:-767021 Msa0342810:CDS
CCAGGTGGTGATTTATTGAC+TGG 0.337844 3_1:-765415 Msa0342810:CDS
GAACCTCCTCCCCGTCTTCC+TGG 0.338704 3_1:-765460 Msa0342810:CDS
CGTGGCCTCCAACCAGAATC+AGG 0.340011 3_1:+766702 None:intergenic
CGTTCATTTGAAATATGTTT+GGG 0.340108 3_1:+773867 None:intergenic
TTTGTTCCCCATCGCGATTA+TGG 0.342781 3_1:+773789 None:intergenic
CGGCGATTCTATTAATCTTT+CGG 0.343644 3_1:-773602 Msa0342810:CDS
TTCCCCTCTAAAGCCATCTA+TGG 0.343803 3_1:-769978 Msa0342810:CDS
TAGAATAGCCAAACATTCTA+AGG 0.343818 3_1:+767754 None:intergenic
AATTTACTTCCAAACCTTGA+TGG 0.344298 3_1:+764789 None:intergenic
TAAATTACTAAAGTTCATTT+CGG 0.344323 3_1:-764772 Msa0342810:three_prime_UTR
GTTGCAATGAAGTTTCTCTT+TGG 0.345255 3_1:-765981 Msa0342810:CDS
TACGAAACAAAATCTAGTTT+TGG 0.348761 3_1:-765204 Msa0342810:CDS
CTGTAGATAAAGTAAGTTAT+AGG 0.357276 3_1:-764708 Msa0342810:three_prime_UTR
TACGTCGATGGGATCATTAC+AGG 0.359928 3_1:-765375 Msa0342810:intron
ACGTTCATTTGAAATATGTT+TGG 0.362237 3_1:+773866 None:intergenic
ATCTTGCGGATTCCAATATC+TGG 0.363639 3_1:+769325 None:intergenic
ATTTGTGGACCAAACCTAAA+AGG 0.363752 3_1:-765246 Msa0342810:CDS
CGAAGGAAAGGGCGTATAAC+AGG 0.363774 3_1:+767569 None:intergenic
TGCTGCTAGTAGTGAGAGCC+TGG 0.364026 3_1:-767621 Msa0342810:CDS
TGAAGGTTTGGTTCTTGTTA+AGG 0.365416 3_1:-773638 Msa0342810:CDS
TACGCCTTGTCCCTAGCATC+AGG 0.366208 3_1:-766195 Msa0342810:CDS
TTCTCTGAAGCAAGAGATAC+AGG 0.372747 3_1:+767539 None:intergenic
ACAGTCTAAAATATGGGAAA+TGG 0.373545 3_1:-767399 Msa0342810:CDS
GTCCGATATGCCTTGGGCCT+TGG 0.374558 3_1:-765563 Msa0342810:CDS
AGTTGGCTTACTTGAAGGTT+TGG 0.374763 3_1:+765540 None:intergenic
CGGAAGAAGACTCTGTTATC+TGG 0.378830 3_1:-770671 Msa0342810:CDS
TGTTCGTTGCGCTGCTTTGG+AGG 0.380118 3_1:-768386 Msa0342810:CDS
GACAAAAGCTACTGCATTTG+TGG 0.380454 3_1:-765261 Msa0342810:CDS
CAGGGGTGTAATTACACTTT+GGG 0.385385 3_1:-766139 Msa0342810:CDS
CATCATTCTCCCCGGGGTCT+GGG 0.385454 3_1:+768114 None:intergenic
GGACTATCTTCTAATAATAA+AGG 0.385809 3_1:-766801 Msa0342810:CDS
TAGTTCATCTTCAATGCCTT+GGG 0.386911 3_1:-766994 Msa0342810:CDS
CAAAGAAAGCGCGAGTTTCA+TGG 0.387216 3_1:-768941 Msa0342810:CDS
TATTGTGTTATCCTAGTGAA+TGG 0.390296 3_1:-767670 Msa0342810:CDS
TTAGTTCATCTTCAATGCCT+TGG 0.390398 3_1:-766995 Msa0342810:CDS
AGGAGGAAACTCCCGCACTA+TGG 0.390750 3_1:+768345 None:intergenic
GAATACTTCCAAGAGTTTAC+AGG 0.390946 3_1:+766099 None:intergenic
ATAGATGAATGCCACAGTTC+TGG 0.392359 3_1:+766274 None:intergenic
CTATGGATTTATTTGCTGTT+GGG 0.393028 3_1:-769961 Msa0342810:intron
TATTAGGAGAGCGCTTCTTC+AGG 0.393075 3_1:-768002 Msa0342810:CDS
ATTAGTTAATTACCGTTGAT+AGG 0.393900 3_1:-764441 Msa0342810:three_prime_UTR
CCCAGAGAATTCATTTGTAA+TGG 0.394515 3_1:+767020 None:intergenic
ATCTTCATCATCAATATATA+GGG 0.396562 3_1:+768465 None:intergenic
GTTGTTCAAGAACTTGTTAT+GGG 0.398737 3_1:-768043 Msa0342810:CDS
CATCAGGGCCTTGTTCCAAC+TGG 0.399695 3_1:-766179 Msa0342810:CDS
TGAAAATGGAGGGGAGATAC+AGG 0.400930 3_1:-770011 Msa0342810:CDS
GGTTGTTCAAGAACTTGTTA+TGG 0.404518 3_1:-768044 Msa0342810:CDS
AATTGTTCGTTGCGCTGCTT+TGG 0.405253 3_1:-768389 Msa0342810:CDS
CAATAAATCACCACCTGGTA+AGG 0.407242 3_1:+765420 None:intergenic
TTAGTTTCGTTGAGAAGAAA+TGG 0.408112 3_1:-771163 Msa0342810:CDS
GGCCTGATGATTTGTCTTGA+GGG 0.410454 3_1:-764507 Msa0342810:three_prime_UTR
ATTTCCTCAGCTGCAGAAGC+TGG 0.411788 3_1:+768077 None:intergenic
TTCTGCTGAAATGTATCTAA+AGG 0.412239 3_1:-769263 Msa0342810:CDS
TGTACATAATTAGTGATTCC+TGG 0.412970 3_1:-764743 Msa0342810:three_prime_UTR
GAGCTGGGCTGAAAAGCAAC+AGG 0.414559 3_1:-767336 Msa0342810:CDS
GAAAGCATTGCAATCACATA+TGG 0.414661 3_1:+768424 None:intergenic
TCTATGGATTTATTTGCTGT+TGG 0.415411 3_1:-769962 Msa0342810:CDS
GTTGAAGACAGAGAAGCATT+TGG 0.416553 3_1:+766033 None:intergenic
TTTGAAGCAATATCCTCTTC+CGG 0.417289 3_1:+767714 None:intergenic
GTCCTCTCCATTCCGATATG+AGG 0.419892 3_1:-769174 Msa0342810:CDS
GCTGGTCCTCAGCAAGGAAT+AGG 0.420817 3_1:-768805 Msa0342810:CDS
TTTATGTCACCAACCTTTAG+TGG 0.421196 3_1:-767146 Msa0342810:CDS
CATAATGCTGTTATTATCCA+TGG 0.422172 3_1:+766305 None:intergenic
GATAGTCAGTCGGATACATT+TGG 0.423026 3_1:-768628 Msa0342810:CDS
TGACTCAACAGTCAAGATTT+GGG 0.424025 3_1:-766586 Msa0342810:CDS
TTCTTGTACCTGTAAACTCT+TGG 0.424071 3_1:-766107 Msa0342810:CDS
CGCACGTTACTTCCCTTACC+AGG 0.424660 3_1:-765433 Msa0342810:CDS
TGAGAAGTTGGCTTACTTGA+AGG 0.429375 3_1:+765535 None:intergenic
CTTTGGTGATGGAACTGAAT+TGG 0.432583 3_1:+766941 None:intergenic
GTCTGGGTGGATGATGTAAA+TGG 0.433578 3_1:+768130 None:intergenic
ACAGCAAATAAATCCATAGA+TGG 0.435795 3_1:+769965 None:intergenic
TTATGTGTAGCAATGCTTCC+AGG 0.436550 3_1:-766492 Msa0342810:CDS
TAGATGAATGCCACAGTTCT+GGG 0.437167 3_1:+766275 None:intergenic
TCATTTGTTTAAGTATCTCC+TGG 0.437177 3_1:+769028 None:intergenic
AAATCCATAGATGGCTTTAG+AGG 0.437513 3_1:+769974 None:intergenic
ACACTTTCCTCAGGATCATC+AGG 0.438546 3_1:+768271 None:intergenic
GTATTGATCATCCTCATGTT+TGG 0.439994 3_1:-773537 Msa0342810:CDS
GATCATATCTCTAGAGGTCT+AGG 0.441679 3_1:-766414 Msa0342810:CDS
GCAGCTGCAAGAATTGCCTT+TGG 0.444314 3_1:+764910 None:intergenic
GCCCCTTGTTTATGTGGCCG+CGG 0.444388 3_1:-766004 Msa0342810:CDS
CAAACTGTTCGCACCACTAA+AGG 0.445852 3_1:+767133 None:intergenic
TTGGAGGCCACGTGGGGTGT+TGG 0.446400 3_1:-766691 Msa0342810:CDS
GGTGTTGGTTGCACACCTCC+AGG 0.449380 3_1:-766676 Msa0342810:CDS
GGCAGCTGTACTCTTGTTGA+AGG 0.449481 3_1:-768494 Msa0342810:CDS
GGTTTGTATCAGGGTCGTCC+AGG 0.449620 3_1:-766158 Msa0342810:CDS
ATCCGACTGACTATCATATT+CGG 0.451086 3_1:+768636 None:intergenic
GTGTAAACACGATGAAGGTT+TGG 0.451836 3_1:-773650 Msa0342810:CDS
GACAAGGCGTAGCCCTCGTC+AGG 0.452628 3_1:+766207 None:intergenic
TCCACACTGAAGGAGTATAA+AGG 0.452923 3_1:+767083 None:intergenic
CACTAGGCCCCTTGTTTATG+TGG 0.453443 3_1:-766010 Msa0342810:CDS
CTTAAAGCTTGCTCAATGTA+AGG 0.454449 3_1:+767806 None:intergenic
CCCCTTGTTTATGTGGCCGC+GGG 0.454578 3_1:-766003 Msa0342810:CDS
ATTCCTTGCTGAGGACCAGC+TGG 0.455754 3_1:+768808 None:intergenic
TTCATCACAGTCTAAAATAT+GGG 0.456196 3_1:-767405 Msa0342810:CDS
AGCAAGCTTAGCTATGTTGC+TGG 0.458203 3_1:+768234 None:intergenic
TGGAACAAGGCCCTGATGCT+AGG 0.458577 3_1:+766184 None:intergenic
GCTCAACAAATTGTTGGAAC+TGG 0.458594 3_1:-767305 Msa0342810:CDS
GAGTCTAAATTTAGAGATAT+GGG 0.459652 3_1:-767245 Msa0342810:CDS
CTTGGATCTGACTGAGAAGT+TGG 0.463106 3_1:+765523 None:intergenic
TCTGGGGCTCAACAAATTGT+TGG 0.463389 3_1:-767311 Msa0342810:CDS
ACCAAAGAAGGTGCAATACT+TGG 0.463919 3_1:-766342 Msa0342810:CDS
AGAGTACAGCTGCCCTCCTT+AGG 0.463977 3_1:+768503 None:intergenic
CAGAAATGTCCGATATGCCT+TGG 0.464220 3_1:-765570 Msa0342810:CDS
TTAGTCGATCATGCAAATTA+TGG 0.464265 3_1:+771201 None:intergenic
GAGATGGGGCCATCAAGGTT+TGG 0.469428 3_1:-764798 Msa0342810:CDS
ATCCTTTCGTAATGGTAGAA+AGG 0.470869 3_1:+768600 None:intergenic
AGTGAAATCCAAACCTGAAA+AGG 0.471576 3_1:+773514 None:intergenic
GTTCCAACTGGTTTGTATCA+GGG 0.473177 3_1:-766167 Msa0342810:CDS
TCCTTTCGTAATGGTAGAAA+GGG 0.473421 3_1:+768601 None:intergenic
CAACTTGACATTGCGTATGC+AGG 0.475429 3_1:+768531 None:intergenic
TACCCTCAAGACAAATCATC+AGG 0.476480 3_1:+764505 None:intergenic
TAGAAAGACAGAGAAAGATA+TGG 0.477066 3_1:-767433 Msa0342810:CDS
GTTGCTATCAGTATGCATAA+AGG 0.477799 3_1:+767220 None:intergenic
CCAGGGGTGTAATTACACTT+TGG 0.477901 3_1:-766140 Msa0342810:CDS
AATAGAATCACGATGGCAAC+CGG 0.479262 3_1:+764873 None:intergenic
CTTACTTGAAGGTTTGGCCA+AGG 0.479441 3_1:+765546 None:intergenic
AAAACCTCCTGTCTCAAGAC+AGG 0.479624 3_1:-767498 Msa0342810:CDS
TTGGTGCAGATACCAGATAT+TGG 0.480102 3_1:-769337 Msa0342810:intron
CAAATAGTGGTTGGCCCTCA+AGG 0.480696 3_1:+769532 None:intergenic
GGAAGTAACGTGCGAATACC+AGG 0.484632 3_1:+765442 None:intergenic
CAGGTGGTGATTTATTGACT+GGG 0.485149 3_1:-765414 Msa0342810:CDS
AGTTGAGACAGTTCAAATAG+TGG 0.485552 3_1:+769519 None:intergenic
AATAATAATAAGAGTCCAGC+TGG 0.485791 3_1:-768823 Msa0342810:CDS
GCGCAACGAACAATTGCTGC+TGG 0.488076 3_1:+768397 None:intergenic
AGTTGGACTCATTAAAGAGC+TGG 0.488893 3_1:-767352 Msa0342810:CDS
TGTTAAGCTTTGAATGTTGA+CGG 0.489128 3_1:-764617 Msa0342810:three_prime_UTR
TACTCTCAAGTGGTAGAGAT+GGG 0.491239 3_1:-764813 Msa0342810:CDS
CACTTGAGAGTAGAAGTCTC+TGG 0.495465 3_1:+764824 None:intergenic
GCTGCTGCCACTGATTCCGC+CGG 0.497162 3_1:-764892 Msa0342810:CDS
ACTATCACTTGTGCTGAACC+TGG 0.497595 3_1:+766474 None:intergenic
TGGCCTGATGATTTGTCTTG+AGG 0.497661 3_1:-764508 Msa0342810:three_prime_UTR
TCTGTTGATCATATCTCTAG+AGG 0.500471 3_1:-766420 Msa0342810:CDS
AAATCCTGATAAATCAGCTT+GGG 0.501210 3_1:+766749 None:intergenic
CTCATCTCGATCATTTAAGA+AGG 0.502367 3_1:+767910 None:intergenic
AGTGTGGACAGGAGAGGAAT+GGG 0.503355 3_1:-767068 Msa0342810:CDS
TCAATAAGCTTGAGTGAGGC+AGG 0.504278 3_1:-768184 Msa0342810:CDS
GTGATAGTTGGAGCATATGA+TGG 0.505440 3_1:-766459 Msa0342810:CDS
ATTGTGTTATCCTAGTGAAT+GGG 0.506500 3_1:-767669 Msa0342810:CDS
TTAAGATGTTATGAGTCTTG+TGG 0.506887 3_1:-764469 Msa0342810:three_prime_UTR
GTTTGTATCAGGGTCGTCCA+GGG 0.509654 3_1:-766157 Msa0342810:CDS
TATCAGATAGCGCTGGCTGT+TGG 0.509791 3_1:+767279 None:intergenic
CCATCCCTGATTCTGGTTGG+AGG 0.510475 3_1:-766707 Msa0342810:CDS
GTCAAAGCTAACTTATCGCC+TGG 0.511516 3_1:-766529 Msa0342810:CDS
TGACAGCTGAACGATGCTCC+TGG 0.512038 3_1:+766658 None:intergenic
TTCTCAACGAAACTAAGAAA+AGG 0.512248 3_1:+771170 None:intergenic
GATGATGCAGGTGTGACCTC+TGG 0.513874 3_1:-768988 Msa0342810:CDS
TTTAAGAAGGCGGGAAGGAT+AGG 0.516327 3_1:+767923 None:intergenic
ATTCTGGTTGGAGGCCACGT+GGG 0.516345 3_1:-766698 Msa0342810:CDS
CGTGCGAATACCAGGAAGAC+GGG 0.516743 3_1:+765450 None:intergenic
ATAACGCATGGCTTCCCTCC+AGG 0.517178 3_1:+766511 None:intergenic
TATAAAAGGAATTGATGAGT+TGG 0.518197 3_1:-767369 Msa0342810:CDS
TCCTCTCCTGTCCACACTGA+AGG 0.519010 3_1:+767073 None:intergenic
ACATCATCCACCCAGACCCC+GGG 0.519113 3_1:-768124 Msa0342810:CDS
GATTATGGATCGATTATTTG+TGG 0.519587 3_1:+773804 None:intergenic
TTGCGATTAACATTTCGTCT+TGG 0.519920 3_1:+765505 None:intergenic
TAGAAAACCTGTCTTGAGAC+AGG 0.520454 3_1:+767491 None:intergenic
ACAACGTGATCCGCAGTTCT+CGG 0.521046 3_1:-767189 Msa0342810:CDS
AATCTTGACTGTTGAGTCAT+CGG 0.521532 3_1:+766590 None:intergenic
GACAGAGAAGCATTTGGAGG+AGG 0.521628 3_1:+766039 None:intergenic
CCATTACAAATGAATTCTCT+GGG 0.522039 3_1:-767020 Msa0342810:CDS
TATTTATCATCATTCTCCCC+GGG 0.522761 3_1:+768107 None:intergenic
TGTGGGACAAAGAAGTGTAG+AGG 0.523366 3_1:-767840 Msa0342810:CDS
ACTATATCGAATGCATTTCG+AGG 0.523879 3_1:-768715 Msa0342810:CDS
CAGTGTGGACAGGAGAGGAA+TGG 0.523929 3_1:-767069 Msa0342810:CDS
TATACTCCTTCAGTGTGGAC+AGG 0.524183 3_1:-767079 Msa0342810:CDS
AAAATGGGTTCTTCCGGAAG+AGG 0.524474 3_1:-767727 Msa0342810:CDS
GGTTCAGCACAAGTGATAGT+TGG 0.525339 3_1:-766471 Msa0342810:CDS
GAAATCCTGATAAATCAGCT+TGG 0.526887 3_1:+766748 None:intergenic
AATCCATAGATGGCTTTAGA+GGG 0.527148 3_1:+769975 None:intergenic
TCAGCAGAAAATCGAGACTC+TGG 0.527413 3_1:+769277 None:intergenic
GGCCAAGGCCCAAGGCATAT+CGG 0.527916 3_1:+765561 None:intergenic
GGAGGAAACTCCCGCACTAT+GGG 0.530973 3_1:+768346 None:intergenic
CTACTCTCAAGTGGTAGAGA+TGG 0.531681 3_1:-764814 Msa0342810:CDS
AACCCGCGGCCACATAAACA+AGG 0.532615 3_1:+766001 None:intergenic
ATTCAGTGTAAACACGATGA+AGG 0.532721 3_1:-773655 Msa0342810:CDS
TAGTGAGAGCCTGGGTGCAG+TGG 0.533594 3_1:-767612 Msa0342810:CDS
AGAAATGTCCGATATGCCTT+GGG 0.533977 3_1:-765569 Msa0342810:CDS
ATAAGTTAGCTTTGACCTGA+AGG 0.534059 3_1:+766536 None:intergenic
CTATTTATCATCATTCTCCC+CGG 0.534102 3_1:+768106 None:intergenic
ATAGTTTGAAGCAGCTCACC+AGG 0.534125 3_1:+768733 None:intergenic
AATCGATCCATAATCGCGAT+GGG 0.534174 3_1:-773796 Msa0342810:exon
ATAATGCTGTTATTATCCAT+GGG 0.537303 3_1:+766306 None:intergenic
AGAGGTCACACCTGCATCAT+CGG 0.537985 3_1:+768990 None:intergenic
CTCATAGTATCCTTTCGTAA+TGG 0.538283 3_1:+768592 None:intergenic
TGGTAGAGATGGGGCCATCA+AGG 0.539125 3_1:-764803 Msa0342810:CDS
CTACAGTTCTACTAGCTACC+AGG 0.541911 3_1:+764725 None:intergenic
GGAAATATCTTTGCATCACT+AGG 0.543013 3_1:+768325 None:intergenic
TCTCGATCATTTAAGAAGGC+GGG 0.543606 3_1:+767914 None:intergenic
AATTGCCTTTGGTGTCAGCT+TGG 0.543834 3_1:+764921 None:intergenic
TACATCATCCACCCAGACCC+CGG 0.543850 3_1:-768125 Msa0342810:CDS
GGTGTCAGCTTGGTTGCAAG+AGG 0.543856 3_1:+764931 None:intergenic
AACTTCTTGCGTATCGCAGA+GGG 0.544928 3_1:-769500 Msa0342810:CDS
GGTACATGAACCAGATCCTA+AGG 0.545462 3_1:-766865 Msa0342810:CDS
ATGTCAAGTTGCCTCACCTA+AGG 0.545488 3_1:-768519 Msa0342810:CDS
GAAGACAGAGAAGCATTTGG+AGG 0.546432 3_1:+766036 None:intergenic
TTGAAATGTGCTATTGAGAA+AGG 0.546620 3_1:+766830 None:intergenic
TCAAGTTGCCTCACCTAAGG+AGG 0.546995 3_1:-768516 Msa0342810:CDS
GAAGGTTTGGCCAAGGCCCA+AGG 0.547022 3_1:+765553 None:intergenic
CATACTGATAGCAACATGTT+GGG 0.548501 3_1:-767212 Msa0342810:CDS
CTGAAAGAAGTTCTTGGACG+CGG 0.550940 3_1:-773694 Msa0342810:CDS
GCATACTGATAGCAACATGT+TGG 0.551972 3_1:-767213 Msa0342810:CDS
CATATCCTCACACTTTCCTC+AGG 0.552109 3_1:+768262 None:intergenic
ATCGTCATACGGTATGTATG+TGG 0.552186 3_1:+770726 None:intergenic
AAATTAAAGGACTTACTAAG+TGG 0.552465 3_1:+766966 None:intergenic
GAACTGTGGCATTCATCTAT+GGG 0.556819 3_1:-766271 Msa0342810:CDS
GGAACAAGGCCCTGATGCTA+GGG 0.556901 3_1:+766185 None:intergenic
GGACCAAACCTAAAAGGAGT+TGG 0.557868 3_1:-765240 Msa0342810:CDS
ATGTCCAGCTTCTGCAGCTG+AGG 0.559074 3_1:-768081 Msa0342810:CDS
CTTCTCTGTCTTCAACCACT+AGG 0.560663 3_1:-766026 Msa0342810:CDS
AAACAGTCATCCGATGATGC+AGG 0.561024 3_1:-769000 Msa0342810:CDS
TAATCGATCCATAATCGCGA+TGG 0.561127 3_1:-773797 Msa0342810:exon
GCATTTCCTATTCCTTGCTG+AGG 0.562118 3_1:+768799 None:intergenic
CATCCATCCCTGATTCTGGT+TGG 0.562681 3_1:-766710 Msa0342810:CDS
TTTCGTTGAGAAGAAATGGT+TGG 0.563110 3_1:-771159 Msa0342810:CDS
GTATCTCCTGGAAAGCACTC+TGG 0.566816 3_1:+769040 None:intergenic
TGACATTCTGCCCATAGTGC+GGG 0.567791 3_1:-768356 Msa0342810:CDS
TTAATCTTTCGGAGTATGAA+CGG 0.567893 3_1:-773591 Msa0342810:CDS
ACAGGTTGTCTACGAAGGAA+AGG 0.569216 3_1:+767557 None:intergenic
CAACGGTAATTAACTAATTG+GGG 0.569381 3_1:+764446 None:intergenic
TGCAACCAAGCTGACACCAA+AGG 0.569821 3_1:-764926 Msa0342810:CDS
ACCCTTTCTACCATTACGAA+AGG 0.570009 3_1:-768602 Msa0342810:CDS
CTTGGAGAACTCCAGAAGCT+CGG 0.570042 3_1:-767462 Msa0342810:CDS
TACTATGAGATGTGAAGGCA+TGG 0.570884 3_1:-768578 Msa0342810:CDS
CAGGTTGTCTACGAAGGAAA+GGG 0.570971 3_1:+767558 None:intergenic
GAGACAGTTCAAATAGTGGT+TGG 0.573964 3_1:+769523 None:intergenic
TCGTGATTCTATTGTGTCTG+TGG 0.576326 3_1:-764863 Msa0342810:CDS
TATTGCTGATGTCACAAAGA+AGG 0.576545 3_1:-766367 Msa0342810:CDS
ATGGCAACCGGCGGAATCAG+TGG 0.577820 3_1:+764885 None:intergenic
TGAAAAGCAACAGGGTTCTG+GGG 0.578532 3_1:-767327 Msa0342810:CDS
TCCTCTCCATTCCGATATGA+GGG 0.578708 3_1:-769173 Msa0342810:intron
CCAAAGTGTAATTACACCCC+TGG 0.578971 3_1:+766140 None:intergenic
AATAAATCACCACCTGGTAA+GGG 0.579357 3_1:+765421 None:intergenic
GTAAAACAGAGCCACGAGAA+GGG 0.581547 3_1:-771002 Msa0342810:CDS
AGAGAATGCTAGCTGCCACC+AGG 0.581685 3_1:-765953 Msa0342810:intron
ATCTCGATCATTTAAGAAGG+CGG 0.582307 3_1:+767913 None:intergenic
TGTAAAACAGAGCCACGAGA+AGG 0.582971 3_1:-771003 Msa0342810:CDS
GAGAAGCATTTGGAGGAGGA+AGG 0.583269 3_1:+766043 None:intergenic
CGACCCTGATACAAACCAGT+TGG 0.584028 3_1:+766164 None:intergenic
ACGCCTTGTCCCTAGCATCA+GGG 0.585281 3_1:-766194 Msa0342810:CDS
CACATACCCTCATATCGGAA+TGG 0.585395 3_1:+769167 None:intergenic
GATTCTGGTTGGAGGCCACG+TGG 0.587663 3_1:-766699 Msa0342810:CDS
AATGGAGAATCAGAAGCTGC+AGG 0.590111 3_1:+767038 None:intergenic
AGTCTAAATTTAGAGATATG+GGG 0.591571 3_1:-767244 Msa0342810:CDS
AAATCAGATGGATCGTCATA+CGG 0.592053 3_1:+770715 None:intergenic
GTGGCAAACTCAGTTCATCA+AGG 0.592174 3_1:+768158 None:intergenic
CTGATTTGAAGATACGTCGA+TGG 0.593970 3_1:-765387 Msa0342810:CDS
GTTGGACTCATTAAAGAGCT+GGG 0.594944 3_1:-767351 Msa0342810:CDS
TTCTGGTTGGAGGCCACGTG+GGG 0.595661 3_1:-766697 Msa0342810:CDS
CATTCTCCCCGGGGTCTGGG+TGG 0.597763 3_1:+768117 None:intergenic
AAGGATACTATGAGATGTGA+AGG 0.598725 3_1:-768583 Msa0342810:CDS
ACAAAGAAGGATACCAAAGA+AGG 0.599592 3_1:-766354 Msa0342810:CDS
ATACCAGGAAGACGGGGAGG+AGG 0.599624 3_1:+765457 None:intergenic
ACATATGACAAGCCATCAGA+AGG 0.599919 3_1:-767110 Msa0342810:CDS
CAGAGACTTCTACTCTCAAG+TGG 0.600869 3_1:-764823 Msa0342810:CDS
GTGATATTAATAGCTTACTG+AGG 0.602685 3_1:-768855 Msa0342810:CDS
AGCAAGGTAAAGCCAATTTG+AGG 0.602848 3_1:+770768 None:intergenic
GATCTTCGTACCCATTCACT+AGG 0.603575 3_1:+767659 None:intergenic
TCGTCATACGGTATGTATGT+GGG 0.605383 3_1:+770727 None:intergenic
TCAGGAAGCATAGAAAGCAT+AGG 0.606087 3_1:+768289 None:intergenic
ACGTTGATGGTAACTCGTGT+AGG 0.607943 3_1:+773728 None:intergenic
GTGGCCTCCAACCAGAATCA+GGG 0.608712 3_1:+766703 None:intergenic
GAGATACAGGTTGTCTACGA+AGG 0.609317 3_1:+767552 None:intergenic
CACGAGAAGGGAGTTTGTCA+TGG 0.611540 3_1:-770990 Msa0342810:intron
TTGTCACTATCAGATAGCGC+TGG 0.612322 3_1:+767272 None:intergenic
CACATAAACAAGGGGCCTAG+TGG 0.612775 3_1:+766011 None:intergenic
CCAGTCAATAAATCACCACC+TGG 0.612997 3_1:+765415 None:intergenic
TGATTTGAAGATACGTCGAT+GGG 0.613054 3_1:-765386 Msa0342810:CDS
ACCTGAAAAGGCCAAACATG+AGG 0.613181 3_1:+773526 None:intergenic
GATACAAACCAGTTGGAACA+AGG 0.614163 3_1:+766171 None:intergenic
CGAAGGAAAAGAGAGGACAT+AGG 0.614178 3_1:-768913 Msa0342810:CDS
TGATATTAATAGCTTACTGA+GGG 0.614256 3_1:-768854 Msa0342810:CDS
TATGCTTCCTGATGATCCTG+AGG 0.615595 3_1:-768278 Msa0342810:CDS
GCTGCTAGTAGTGAGAGCCT+GGG 0.617575 3_1:-767620 Msa0342810:CDS
AGGCCCTGATGCTAGGGACA+AGG 0.618404 3_1:+766191 None:intergenic
AAGCTAACTTATCGCCTGGA+GGG 0.618427 3_1:-766525 Msa0342810:CDS
TATAAAGGTATGCCTTCTGA+TGG 0.619035 3_1:+767098 None:intergenic
CCCGCGGCCACATAAACAAG+GGG 0.619959 3_1:+766003 None:intergenic
AGTCCAGCTGGTCCTCAGCA+AGG 0.620870 3_1:-768811 Msa0342810:CDS
TGAAAGATGCAAAGTCAGCA+AGG 0.621874 3_1:+770752 None:intergenic
AATATCTTTGCATCACTAGG+AGG 0.624183 3_1:+768328 None:intergenic
CTCTTCCAAAAGTTCTCCAG+AGG 0.624820 3_1:+768972 None:intergenic
TCCTTCAGTGTGGACAGGAG+AGG 0.628978 3_1:-767074 Msa0342810:CDS
GTCTAAATTTAGAGATATGG+GGG 0.631163 3_1:-767243 Msa0342810:CDS
ACTCTGTTATCTGGCACCTG+AGG 0.633407 3_1:-770662 Msa0342810:intron
ATGTTGACGGTGTCAGTAGT+CGG 0.633585 3_1:-764604 Msa0342810:three_prime_UTR
ATGTATCTAAAGGAATACGC+TGG 0.633667 3_1:-769253 Msa0342810:CDS
GATGATGTAAATGGCTTCTG+TGG 0.634236 3_1:+768139 None:intergenic
ACCCGCGGCCACATAAACAA+GGG 0.636814 3_1:+766002 None:intergenic
AAAAGAGAGGACATAGGCAA+CGG 0.637563 3_1:-768907 Msa0342810:CDS
CCTCCAACCAGAATCAGGGA+TGG 0.638333 3_1:+766707 None:intergenic
AGGATAACACAATAAAGCAA+AGG 0.639110 3_1:+767679 None:intergenic
GTCCGAATATGATAGTCAGT+CGG 0.639328 3_1:-768638 Msa0342810:CDS
AAAGCTAACTTATCGCCTGG+AGG 0.641567 3_1:-766526 Msa0342810:CDS
CAACTTCTTGCGTATCGCAG+AGG 0.641712 3_1:-769501 Msa0342810:CDS
CTGTTCGCACCACTAAAGGT+TGG 0.641937 3_1:+767137 None:intergenic
AGGTGGTGATTTATTGACTG+GGG 0.644637 3_1:-765413 Msa0342810:CDS
AGAAACTTCATTGCAACCCG+CGG 0.645280 3_1:+765987 None:intergenic
AATGGAGAGGACTCCAGCAA+CGG 0.646565 3_1:+769185 None:intergenic
GTGCGAATACCAGGAAGACG+GGG 0.647039 3_1:+765451 None:intergenic
GTGACATTCTGCCCATAGTG+CGG 0.647435 3_1:-768357 Msa0342810:CDS
TTACTAAGTGGATTAACCCA+AGG 0.651083 3_1:+766978 None:intergenic
ACGTGCGAATACCAGGAAGA+CGG 0.654575 3_1:+765449 None:intergenic
GTACGAACAGGTACTGAGGA+CGG 0.654777 3_1:-765611 Msa0342810:intron
AGAATCACGATGGCAACCGG+CGG 0.655589 3_1:+764876 None:intergenic
TCTTCACATGAACCTATCAA+CGG 0.656434 3_1:+764429 None:intergenic
CAAGTTGCCTCACCTAAGGA+GGG 0.658157 3_1:-768515 Msa0342810:CDS
GTTAAAAGCTACTCCTGACG+AGG 0.661234 3_1:-766220 Msa0342810:CDS
ATCCATAGATGGCTTTAGAG+GGG 0.663630 3_1:+769976 None:intergenic
GCTGAGGAAATCAATTGCAG+AGG 0.663730 3_1:-768065 Msa0342810:CDS
ACAGCTGCCCTCCTTAGGTG+AGG 0.665238 3_1:+768508 None:intergenic
AGAGCGCTTCTTCAGGACAT+CGG 0.667209 3_1:-767995 Msa0342810:CDS
TTTGTATCAGGGTCGTCCAG+GGG 0.667447 3_1:-766156 Msa0342810:CDS
GCATTGCTACACATAACGCA+TGG 0.668246 3_1:+766499 None:intergenic
GATCATTTAAGAAGGCGGGA+AGG 0.668715 3_1:+767918 None:intergenic
ACCTTTATACTCCTTCAGTG+TGG 0.669124 3_1:-767084 Msa0342810:CDS
TCATGTGCTGAATCATCTTG+CGG 0.669479 3_1:+769311 None:intergenic
GGTGGTGATTTATTGACTGG+GGG 0.670049 3_1:-765412 Msa0342810:CDS
ACACTCAATAAGCTTGAGTG+AGG 0.671057 3_1:-768188 Msa0342810:CDS
GATCTGGTTCATGTACCACT+CGG 0.671167 3_1:+766871 None:intergenic
ATGTATAGCACCCAGAACTG+TGG 0.671487 3_1:-766285 Msa0342810:CDS
CATATGAATCCACTGCACCC+AGG 0.672096 3_1:+767603 None:intergenic
CATGACAAACTCCCTTCTCG+TGG 0.673310 3_1:+770991 None:intergenic
TCGAGATGAGCAATTAAGGA+CGG 0.673367 3_1:-767897 Msa0342810:CDS
TCTTGTACGAACAGGTACTG+AGG 0.675188 3_1:-765615 Msa0342810:intron
ACTCTCAAGTGGTAGAGATG+GGG 0.678113 3_1:-764812 Msa0342810:CDS
ATCTTTCGGAGTATGAACGG+AGG 0.678229 3_1:-773588 Msa0342810:CDS
AAAACCTGTCTTGAGACAGG+AGG 0.678865 3_1:+767494 None:intergenic
AATAGCACATTTCAAGACGT+CGG 0.681270 3_1:-766822 Msa0342810:CDS
TACTAAACAGTTCCACCGAG+TGG 0.682037 3_1:-766886 Msa0342810:CDS
ATTTATCATCATTCTCCCCG+GGG 0.682091 3_1:+768108 None:intergenic
CTGGTTCATGTACCACTCGG+TGG 0.683309 3_1:+766874 None:intergenic
AACGACGCAAGTATCAGCGT+CGG 0.684293 3_1:-773758 Msa0342810:CDS
TGTGCAACCAACACCCCACG+TGG 0.687534 3_1:+766684 None:intergenic
AGCTGGGCTGAAAAGCAACA+GGG 0.689060 3_1:-767335 Msa0342810:CDS
GCATTCATCTATGGGATACG+AGG 0.690522 3_1:-766263 Msa0342810:CDS
TAATGCTGTTATTATCCATG+GGG 0.690611 3_1:+766307 None:intergenic
GGACTCACGAAGGAAAAGAG+AGG 0.692718 3_1:-768920 Msa0342810:CDS
ACGTTACTTCCCTTACCAGG+TGG 0.693744 3_1:-765430 Msa0342810:CDS
CGAATACCAGGAAGACGGGG+AGG 0.694086 3_1:+765454 None:intergenic
GGAGAATCAGAAGCTGCAGG+AGG 0.694299 3_1:+767041 None:intergenic
ACCCTCATATCGGAATGGAG+AGG 0.702110 3_1:+769172 None:intergenic
ATCGATCCATAATCGCGATG+GGG 0.703125 3_1:-773795 Msa0342810:exon
TTAAAAGCTACTCCTGACGA+GGG 0.704665 3_1:-766219 Msa0342810:CDS
AAGGGCGTATAACAGGAGCA+AGG 0.709055 3_1:+767576 None:intergenic
TGTAACTTCTCCGAGAACTG+CGG 0.709396 3_1:+767179 None:intergenic
GTTAAGGTTTATTTCAAACG+CGG 0.711300 3_1:-773622 Msa0342810:CDS
AAATGGAGGGGAGATACAGG+TGG 0.711805 3_1:-770008 Msa0342810:CDS
CGAGTTTCATGGACTCACGA+AGG 0.717237 3_1:-768930 Msa0342810:CDS
CAGCTGAACGATGCTCCTGG+AGG 0.719386 3_1:+766661 None:intergenic
CAGACACAATAGAATCACGA+TGG 0.737369 3_1:+764866 None:intergenic
CATCATCCACCCAGACCCCG+GGG 0.745673 3_1:-768123 Msa0342810:CDS
ATGATCCTGAGGAAAGTGTG+AGG 0.756474 3_1:-768267 Msa0342810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAAATTAAAAACAAT+TGG + chr3_1:766127-766146 None:intergenic 10.0%
!!! TTTTTTTTTTTTTACTTTTC+CGG - chr3_1:767262-767281 Msa0342810:CDS 10.0%
!! ATAAAAACAGTAAAAAAAAA+TGG + chr3_1:768690-768709 None:intergenic 10.0%
!!! ATAGTAATACTTTTTAAAAA+GGG + chr3_1:769637-769656 None:intergenic 10.0%
!!! TTTAATTTATACAATACTTT+AGG + chr3_1:772555-772574 None:intergenic 10.0%
!!! AGTTAATTTGATTTTGATTT+TGG - chr3_1:764862-764881 Msa0342810:CDS 15.0%
!!! CTGAGTAAATTTTATTTTAA+CGG - chr3_1:766189-766208 Msa0342810:CDS 15.0%
!!! TGAGTCAATTTTTATATTAA+TGG - chr3_1:766362-766381 Msa0342810:CDS 15.0%
!! TTAAAAATCAAAATCAAAAC+AGG + chr3_1:766650-766669 None:intergenic 15.0%
!!! TTTGATTTTGATTTTTAAGT+TGG - chr3_1:766652-766671 Msa0342810:CDS 15.0%
!! ATACAACATTAAAATCAAAT+GGG + chr3_1:766716-766735 None:intergenic 15.0%
!!! AAATTTGCATTATTTTTTGT+AGG - chr3_1:767493-767512 Msa0342810:CDS 15.0%
!! AAAAATCGAATAGATATAAA+AGG + chr3_1:767692-767711 None:intergenic 15.0%
!!! TCTTTCTAGATTTTTTTTTT+GGG - chr3_1:768052-768071 Msa0342810:CDS 15.0%
!! AAAATAAAAAATGCAATTAG+TGG - chr3_1:768144-768163 Msa0342810:CDS 15.0%
!!! TATTTCTTTCATCTTTTTTT+GGG - chr3_1:768259-768278 Msa0342810:CDS 15.0%
!! TATTCAAAATACTAAAATCT+GGG + chr3_1:768947-768966 None:intergenic 15.0%
!!! CATAGTAATACTTTTTAAAA+AGG + chr3_1:769638-769657 None:intergenic 15.0%
!! TAAATTACTAAAGTTCATTT+CGG - chr3_1:773544-773563 Msa0342810:CDS 15.0%
!!! TAGTTTGAGTTAAGTTAATT+AGG - chr3_1:764951-764970 Msa0342810:intron 20.0%
!! TGATTATTGTAGAATTGATT+CGG - chr3_1:765058-765077 Msa0342810:intron 20.0%
!!! TTTTTTCTTATAGTTTTGCT+AGG + chr3_1:765540-765559 None:intergenic 20.0%
!!! AGCTAATTTGATTTTGATTT+TGG - chr3_1:765681-765700 Msa0342810:intron 20.0%
!! AATTAGGATTTGATTGTATT+TGG - chr3_1:765780-765799 Msa0342810:intron 20.0%
!!! AATGTAATTTGGTTTATGTT+TGG - chr3_1:765912-765931 Msa0342810:intron 20.0%
!! CATACAACATTAAAATCAAA+TGG + chr3_1:766717-766736 None:intergenic 20.0%
!!! ATTGTATTTTCTCTTATCAT+GGG - chr3_1:767439-767458 Msa0342810:CDS 20.0%
!! ATTTACAAGAATAACATCAA+TGG + chr3_1:767477-767496 None:intergenic 20.0%
!!! TCTTTCTTATTTCAATTTGT+TGG - chr3_1:767719-767738 Msa0342810:CDS 20.0%
!! TAAATTATGAATTAAGCAAG+TGG - chr3_1:767894-767913 Msa0342810:CDS 20.0%
!! CAAAAAAAAAATCTAGAAAG+AGG + chr3_1:768053-768072 None:intergenic 20.0%
!!! CTCTTTCTAGATTTTTTTTT+TGG - chr3_1:768051-768070 Msa0342810:CDS 20.0%
!!! CTATTTCTTTCATCTTTTTT+TGG - chr3_1:768258-768277 Msa0342810:CDS 20.0%
!!! ATTTCTTTCATCTTTTTTTG+GGG - chr3_1:768260-768279 Msa0342810:CDS 20.0%
!!! TTAATTAACTGACTTAACAA+TGG - chr3_1:768474-768493 Msa0342810:CDS 20.0%
!! AAATTTATAGAACAATCAAC+TGG + chr3_1:768602-768621 None:intergenic 20.0%
!!! AAATATTATTTTACTTCCTC+AGG - chr3_1:768741-768760 Msa0342810:CDS 20.0%
!! GTATTCAAAATACTAAAATC+TGG + chr3_1:768948-768967 None:intergenic 20.0%
!! AATGCACAGAAAATATATTT+CGG + chr3_1:769181-769200 None:intergenic 20.0%
!!! TTATTTTACCTTGATTTTGT+GGG - chr3_1:769228-769247 Msa0342810:CDS 20.0%
!! ATCTTCATCATCAATATATA+GGG + chr3_1:769854-769873 None:intergenic 20.0%
!!! GAAATGGATTTACTTATAAA+AGG - chr3_1:770933-770952 Msa0342810:intron 20.0%
!! ACTTAAATAAAAACAAAAGG+TGG + chr3_1:772531-772550 None:intergenic 20.0%
!! GGTACTTAAATAAAAACAAA+AGG + chr3_1:772534-772553 None:intergenic 20.0%
!! AATTAAAATTTATCATGAGC+TGG - chr3_1:772568-772587 Msa0342810:intron 20.0%
!! TAAAAGTAAAACAATCACTA+AGG + chr3_1:773233-773252 None:intergenic 20.0%
!!! TTCCAATTTGTTTAGAATAT+AGG - chr3_1:773313-773332 Msa0342810:intron 20.0%
!! CGTTCATTTGAAATATGTTT+GGG + chr3_1:764452-764471 None:intergenic 25.0%
!! ACGTTCATTTGAAATATGTT+TGG + chr3_1:764453-764472 None:intergenic 25.0%
!! GATTTCACTTTCTTCTATTT+TGG - chr3_1:764816-764835 Msa0342810:CDS 25.0%
! AACCAAACACATACTAAAAA+CGG + chr3_1:765008-765027 None:intergenic 25.0%
!! GATTATTGTAGAATTGATTC+GGG - chr3_1:765059-765078 Msa0342810:intron 25.0%
!! TTTTTATAATCCGTACCAAA+AGG + chr3_1:765151-765170 None:intergenic 25.0%
!!! TGATTTTGATACATAGAGTT+TGG - chr3_1:765174-765193 Msa0342810:intron 25.0%
!!! CTAAATTGTTATTTTCGTTC+TGG + chr3_1:765255-765274 None:intergenic 25.0%
! CAGAACGAAAATAACAATTT+AGG - chr3_1:765253-765272 Msa0342810:CDS 25.0%
!!! TTGAATGAGAAGTTATTTTG+AGG - chr3_1:765712-765731 Msa0342810:intron 25.0%
!!! TTTTGAGGTTTGAGTTAATT+AGG - chr3_1:765727-765746 Msa0342810:intron 25.0%
! CTTTGTAGTTTGAACTAATT+AGG - chr3_1:765764-765783 Msa0342810:intron 25.0%
! GATTGTATTTGGTTACTTAA+TGG - chr3_1:765791-765810 Msa0342810:intron 25.0%
!! TGAATCTGTAAAATTGATTC+CGG - chr3_1:765875-765894 Msa0342810:intron 25.0%
! AAAGTGAGATGAATGTAATT+TGG - chr3_1:765901-765920 Msa0342810:intron 25.0%
!!! TAAACCTCTAGAATCAATTT+TGG - chr3_1:766084-766103 Msa0342810:CDS 25.0%
!! AAACTTTGTTTGTAGTTTGA+GGG - chr3_1:766227-766246 Msa0342810:CDS 25.0%
!!! TGATTTTAGTGTAGAAATTG+TGG - chr3_1:766315-766334 Msa0342810:CDS 25.0%
!! ATAAAAATTGACTCAGCAAT+CGG + chr3_1:766357-766376 None:intergenic 25.0%
!!! TGATTTTTGAGTTGAAATTG+TGG - chr3_1:766484-766503 Msa0342810:CDS 25.0%
!!! CTGAGTCAATTTGATTTTAA+TGG - chr3_1:766525-766544 Msa0342810:CDS 25.0%
!! ATTTTGTTACTGAAAAGACT+TGG - chr3_1:766602-766621 Msa0342810:CDS 25.0%
! TTAATGTTGTATGTAGTTTG+AGG - chr3_1:766724-766743 Msa0342810:CDS 25.0%
! TAATGTTGTATGTAGTTTGA+GGG - chr3_1:766725-766744 Msa0342810:CDS 25.0%
! GAATTTCCGATTACTATATT+TGG - chr3_1:766747-766766 Msa0342810:CDS 25.0%
!! CAACATTTTGTAGTAAAAAG+CGG + chr3_1:766858-766877 None:intergenic 25.0%
!!! CATTGATTTGGTTACTTAAA+AGG - chr3_1:766954-766973 Msa0342810:CDS 25.0%
!!! TTTTTTTACTTTTCCGGTTT+TGG - chr3_1:767268-767287 Msa0342810:CDS 25.0%
!!! TTTTTTACTTTTCCGGTTTT+GGG - chr3_1:767269-767288 Msa0342810:CDS 25.0%
! ACAAACACAATTAGAAAAGA+GGG - chr3_1:767385-767404 Msa0342810:CDS 25.0%
!! GATTGTATTTTCTCTTATCA+TGG - chr3_1:767438-767457 Msa0342810:CDS 25.0%
! AAGAAAAAAGAGAAATCAGA+TGG + chr3_1:767616-767635 None:intergenic 25.0%
!!! TTTCTCTTTTTTCTTTGACA+CGG - chr3_1:767621-767640 Msa0342810:CDS 25.0%
! CGAATAGATATAAAAGGAAA+AGG + chr3_1:767686-767705 None:intergenic 25.0%
! TAAATTGTGAATTAAGCAAG+TGG - chr3_1:767848-767867 Msa0342810:CDS 25.0%
! ATAGTTTAATCAAGTCATCA+GGG + chr3_1:767874-767893 None:intergenic 25.0%
! AATAGTTTAATCAAGTCATC+AGG + chr3_1:767875-767894 None:intergenic 25.0%
!! AGAGATTTTATGAAAATGGA+GGG - chr3_1:768295-768314 Msa0342810:CDS 25.0%
!!! TTCTTTTTCAACCATGTTTT+AGG - chr3_1:768420-768439 Msa0342810:CDS 25.0%
!! TCTTATTTAAGCCTAAAACA+TGG + chr3_1:768434-768453 None:intergenic 25.0%
! AATAAGAATACTTAATGTGC+AGG - chr3_1:768447-768466 Msa0342810:CDS 25.0%
! TTGTAGTAATATAATCTGCA+AGG - chr3_1:768526-768545 Msa0342810:CDS 25.0%
! CATATTGTGTAATTATGTTG+AGG - chr3_1:768552-768571 Msa0342810:CDS 25.0%
! TAAAGTAAATCTAGAGACTT+CGG + chr3_1:768634-768653 None:intergenic 25.0%
! TTGAATACTTCATTCTCTAT+TGG - chr3_1:768960-768979 Msa0342810:CDS 25.0%
!!! CTTATTTTACCTTGATTTTG+TGG - chr3_1:769227-769246 Msa0342810:CDS 25.0%
! TGATATTAATAGCTTACTGA+GGG - chr3_1:769462-769481 Msa0342810:intron 25.0%
!!! ACTTTTTAGATTTTCAGGAA+AGG + chr3_1:769554-769573 None:intergenic 25.0%
! GATCTTCATCATCAATATAT+AGG + chr3_1:769855-769874 None:intergenic 25.0%
!!! TGTTTATGTTTGCTTTTTTG+TGG - chr3_1:770458-770477 Msa0342810:intron 25.0%
!!! GTTTATGTTTGCTTTTTTGT+GGG - chr3_1:770459-770478 Msa0342810:intron 25.0%
!! TTCATCACAGTCTAAAATAT+GGG - chr3_1:770911-770930 Msa0342810:intron 25.0%
! TATAAAAGGAATTGATGAGT+TGG - chr3_1:770947-770966 Msa0342810:intron 25.0%
! TGAGTCTAAATTTAGAGATA+TGG - chr3_1:771070-771089 Msa0342810:intron 25.0%
! GAGTCTAAATTTAGAGATAT+GGG - chr3_1:771071-771090 Msa0342810:intron 25.0%
! AGTCTAAATTTAGAGATATG+GGG - chr3_1:771072-771091 Msa0342810:intron 25.0%
! AAATTAAAGGACTTACTAAG+TGG + chr3_1:771353-771372 None:intergenic 25.0%
! ACTTAGTAAGTCCTTTAATT+TGG - chr3_1:771352-771371 Msa0342810:intron 25.0%
! GGACTATCTTCTAATAATAA+AGG - chr3_1:771515-771534 Msa0342810:intron 25.0%
! ATAATGCTGTTATTATCCAT+GGG + chr3_1:772013-772032 None:intergenic 25.0%
!! AAGAGACAAATCTTTTCTAT+AGG + chr3_1:772253-772272 None:intergenic 25.0%
! AGAGTATATTTGATAGAACT+AGG + chr3_1:772447-772466 None:intergenic 25.0%
! CAACATAGTTATGATCAATT+TGG + chr3_1:772624-772643 None:intergenic 25.0%
! CAAATTGATCATAACTATGT+TGG - chr3_1:772622-772641 Msa0342810:intron 25.0%
! TTCGTACAAGAAAATAATCA+GGG + chr3_1:772692-772711 None:intergenic 25.0%
!!! TACGAAACAAAATCTAGTTT+TGG - chr3_1:773112-773131 Msa0342810:intron 25.0%
! TTTATGAATCAGTGTTTGAA+AGG - chr3_1:773155-773174 Msa0342810:intron 25.0%
!! AAACAAATTGGAAGTTTTTG+AGG + chr3_1:773306-773325 None:intergenic 25.0%
! TGCCTATATTCTAAACAAAT+TGG + chr3_1:773318-773337 None:intergenic 25.0%
! CTGTAGATAAAGTAAGTTAT+AGG - chr3_1:773608-773627 Msa0342810:CDS 25.0%
!! ATAGGATCTAACCAAATTTT+TGG - chr3_1:773626-773645 Msa0342810:CDS 25.0%
! TCAACGGTAATTAACTAATT+GGG + chr3_1:773874-773893 None:intergenic 25.0%
! ATCAACGGTAATTAACTAAT+TGG + chr3_1:773875-773894 None:intergenic 25.0%
! ATTAGTTAATTACCGTTGAT+AGG - chr3_1:773875-773894 Msa0342810:five_prime_UTR 25.0%
GATTATGGATCGATTATTTG+TGG + chr3_1:764515-764534 None:intergenic 30.0%
AGAACTAGATTATACGTTGA+TGG + chr3_1:764604-764623 None:intergenic 30.0%
GTTAAGGTTTATTTCAAACG+CGG - chr3_1:764694-764713 Msa0342810:three_prime_UTR 30.0%
TTAATCTTTCGGAGTATGAA+CGG - chr3_1:764725-764744 Msa0342810:three_prime_UTR 30.0%
!!! TTCCGTTTTTAGTATGTGTT+TGG - chr3_1:765003-765022 Msa0342810:intron 30.0%
TTGATACATAGAGTTTGGTA+TGG - chr3_1:765179-765198 Msa0342810:intron 30.0%
! AGTATCACCTATCTCTATTT+TGG - chr3_1:765336-765355 Msa0342810:intron 30.0%
TCAACATCCAAAATAGAGAT+AGG + chr3_1:765346-765365 None:intergenic 30.0%
!!! TTTTTTTCCGCTGAAAATTG+TGG - chr3_1:765375-765394 Msa0342810:intron 30.0%
TAATCTACTCTCTTTACTAC+AGG + chr3_1:765480-765499 None:intergenic 30.0%
AGTAAAGAGAGTAGATTAGA+TGG - chr3_1:765482-765501 Msa0342810:CDS 30.0%
! TAGTGAGTTGGATAGAAATA+TGG - chr3_1:765581-765600 Msa0342810:CDS 30.0%
! TTGTTGATATTTTGCTCTGT+TGG - chr3_1:765816-765835 Msa0342810:intron 30.0%
!! ACATTCATCTCACTTTTAAC+CGG + chr3_1:765897-765916 None:intergenic 30.0%
CAAGTTAGAATCAATTGTGA+AGG - chr3_1:766014-766033 Msa0342810:CDS 30.0%
!! AAAACAATTGGTTCCACTTT+TGG + chr3_1:766115-766134 None:intergenic 30.0%
! GAAACTTTGTTTGTAGTTTG+AGG - chr3_1:766226-766245 Msa0342810:CDS 30.0%
! TACTGTGTTTGTTAACTGAA+AGG - chr3_1:766428-766447 Msa0342810:CDS 30.0%
! AAAATCAAATTGACTCAGCA+TGG + chr3_1:766523-766542 None:intergenic 30.0%
! AAACACTGTTTTGTAGTTTG+AGG - chr3_1:766563-766582 Msa0342810:CDS 30.0%
! AACACTGTTTTGTAGTTTGA+GGG - chr3_1:766564-766583 Msa0342810:CDS 30.0%
!!! TGATTTTTAAGTTGGCATTG+TGG - chr3_1:766660-766679 Msa0342810:CDS 30.0%
GCTGAACCAAATATAGTAAT+CGG + chr3_1:766756-766775 None:intergenic 30.0%
AAATCAATGTTGTCAATCAC+TGG + chr3_1:766943-766962 None:intergenic 30.0%
! AGTGATTGACAACATTGATT+TGG - chr3_1:766942-766961 Msa0342810:CDS 30.0%
TGTACTTTAAATTCCTCATG+TGG - chr3_1:767022-767041 Msa0342810:CDS 30.0%
! ATAAAGCAGCTTATCTTTTG+AGG - chr3_1:767081-767100 Msa0342810:CDS 30.0%
TTAGTCGATCATGCAAATTA+TGG + chr3_1:767118-767137 None:intergenic 30.0%
TTCTCAACGAAACTAAGAAA+AGG + chr3_1:767149-767168 None:intergenic 30.0%
TTAGTTTCGTTGAGAAGAAA+TGG - chr3_1:767153-767172 Msa0342810:CDS 30.0%
AAAAATAAGTGGACAAGTGA+AGG + chr3_1:767195-767214 None:intergenic 30.0%
GACAAACACAATTAGAAAAG+AGG - chr3_1:767384-767403 Msa0342810:CDS 30.0%
!!! TTCTCTTTTTTCTTTGACAC+GGG - chr3_1:767622-767641 Msa0342810:CDS 30.0%
CGTAAATAAGAAAGACAACT+TGG + chr3_1:767750-767769 None:intergenic 30.0%
CCTCTAAGCATATAATTATC+TGG + chr3_1:767822-767841 None:intergenic 30.0%
CCAGATAATTATATGCTTAG+AGG - chr3_1:767819-767838 Msa0342810:CDS 30.0%
GATTAAACTAGGACTCATAT+TGG - chr3_1:767929-767948 Msa0342810:CDS 30.0%
ATACTACTAATCTGTGCTTT+AGG - chr3_1:767982-768001 Msa0342810:CDS 30.0%
!!! ACAGATTTTTTGTTAACCTC+GGG + chr3_1:768015-768034 None:intergenic 30.0%
!!! GACAGATTTTTTGTTAACCT+CGG + chr3_1:768016-768035 None:intergenic 30.0%
AAACTACAGAGAGAGAAAAA+AGG + chr3_1:768120-768139 None:intergenic 30.0%
! ATTTTCATAAAATCTCTGGC+AGG + chr3_1:768292-768311 None:intergenic 30.0%
! TGCCAGAGATTTTATGAAAA+TGG - chr3_1:768291-768310 Msa0342810:CDS 30.0%
! CTCCATTTTCATAAAATCTC+TGG + chr3_1:768296-768315 None:intergenic 30.0%
! CAGAGATTTTATGAAAATGG+AGG - chr3_1:768294-768313 Msa0342810:CDS 30.0%
! GAGATTTTATGAAAATGGAG+GGG - chr3_1:768296-768315 Msa0342810:CDS 30.0%
ACAGCAAATAAATCCATAGA+TGG + chr3_1:768354-768373 None:intergenic 30.0%
!! TCTATGGATTTATTTGCTGT+TGG - chr3_1:768354-768373 Msa0342810:CDS 30.0%
!! CTATGGATTTATTTGCTGTT+GGG - chr3_1:768355-768374 Msa0342810:CDS 30.0%
AAAGTAAATCTAGAGACTTC+GGG + chr3_1:768633-768652 None:intergenic 30.0%
TTATTGAAAAGTAACCAGTG+TGG - chr3_1:768651-768670 Msa0342810:CDS 30.0%
ATATTTGTACCTTAGCAAGA+AGG + chr3_1:768727-768746 None:intergenic 30.0%
!!! ACTTTTTCAAGATGTTGACT+TGG + chr3_1:768851-768870 None:intergenic 30.0%
!!! TGTCTTATTTTGTTCTCCAA+TGG - chr3_1:768883-768902 Msa0342810:CDS 30.0%
TTCTGCTGAAATGTATCTAA+AGG - chr3_1:769053-769072 Msa0342810:CDS 30.0%
GAAATGGTGAAAAATAGGTA+GGG + chr3_1:769098-769117 None:intergenic 30.0%
AGAAATGGTGAAAAATAGGT+AGG + chr3_1:769099-769118 None:intergenic 30.0%
ATGCAGAAATGGTGAAAAAT+AGG + chr3_1:769103-769122 None:intergenic 30.0%
AAAAACACATACCCTCATAT+CGG + chr3_1:769157-769176 None:intergenic 30.0%
TCATTTGTTTAAGTATCTCC+TGG + chr3_1:769291-769310 None:intergenic 30.0%
GTGATATTAATAGCTTACTG+AGG - chr3_1:769461-769480 Msa0342810:intron 30.0%
AATAATAATAAGAGTCCAGC+TGG - chr3_1:769493-769512 Msa0342810:CDS 30.0%
AGCATAGGAAAAATATACTC+AGG + chr3_1:770015-770034 None:intergenic 30.0%
!! GTTGTTCAAGAACTTGTTAT+GGG - chr3_1:770273-770292 Msa0342810:intron 30.0%
!!! GGTAAACTTTGCTACTTTTT+TGG - chr3_1:770342-770361 Msa0342810:intron 30.0%
TAGAATAGCCAAACATTCTA+AGG + chr3_1:770565-770584 None:intergenic 30.0%
TTGGCTATTCTATGCAAAAA+TGG - chr3_1:770573-770592 Msa0342810:intron 30.0%
TGGCTATTCTATGCAAAAAT+GGG - chr3_1:770574-770593 Msa0342810:intron 30.0%
AGGATAACACAATAAAGCAA+AGG + chr3_1:770640-770659 None:intergenic 30.0%
TATTGTGTTATCCTAGTGAA+TGG - chr3_1:770646-770665 Msa0342810:intron 30.0%
ATTGTGTTATCCTAGTGAAT+GGG - chr3_1:770647-770666 Msa0342810:intron 30.0%
TAGAAAGACAGAGAAAGATA+TGG - chr3_1:770883-770902 Msa0342810:intron 30.0%
! GTTCATCACAGTCTAAAATA+TGG - chr3_1:770910-770929 Msa0342810:intron 30.0%
! ACAGTCTAAAATATGGGAAA+TGG - chr3_1:770917-770936 Msa0342810:intron 30.0%
GTCTAAATTTAGAGATATGG+GGG - chr3_1:771073-771092 Msa0342810:intron 30.0%
TCCATTACAAATGAATTCTC+TGG - chr3_1:771295-771314 Msa0342810:intron 30.0%
CCATTACAAATGAATTCTCT+GGG - chr3_1:771296-771315 Msa0342810:intron 30.0%
AACTGAATTGGCCAAATTAA+AGG + chr3_1:771366-771385 None:intergenic 30.0%
AAAGAACCTGAAAAAAGCTT+TGG + chr3_1:771395-771414 None:intergenic 30.0%
! TTGAAATGTGCTATTGAGAA+AGG + chr3_1:771489-771508 None:intergenic 30.0%
AAATCCTGATAAATCAGCTT+GGG + chr3_1:771570-771589 None:intergenic 30.0%
! AATGTCTTTTTCCAGCTTTT+TGG + chr3_1:771759-771778 None:intergenic 30.0%
!! AATGTTGTTGAGAAGTATTC+TGG - chr3_1:771926-771945 Msa0342810:intron 30.0%
TAATGCTGTTATTATCCATG+GGG + chr3_1:772012-772031 None:intergenic 30.0%
CATAATGCTGTTATTATCCA+TGG + chr3_1:772014-772033 None:intergenic 30.0%
CTATTTATCCAGAGAAGATT+TGG - chr3_1:772481-772500 Msa0342810:intron 30.0%
ATAGTTATGATCAATTTGGC+AGG + chr3_1:772620-772639 None:intergenic 30.0%
GTTCGTACAAGAAAATAATC+AGG + chr3_1:772693-772712 None:intergenic 30.0%
! GATTATTTTCTTGTACGAAC+AGG - chr3_1:772693-772712 Msa0342810:intron 30.0%
! ACTAAGGTAACAAGAGATTT+TGG + chr3_1:773217-773236 None:intergenic 30.0%
AATATCCAACAGCATTTAGA+TGG + chr3_1:773273-773292 None:intergenic 30.0%
AATTTACTTCCAAACCTTGA+TGG + chr3_1:773530-773549 None:intergenic 30.0%
TGTACATAATTAGTGATTCC+TGG - chr3_1:773573-773592 Msa0342810:CDS 30.0%
TCAAGTTCACACCAAAAATT+TGG + chr3_1:773640-773659 None:intergenic 30.0%
!! TGTTAAGCTTTGAATGTTGA+CGG - chr3_1:773699-773718 Msa0342810:CDS 30.0%
AAGCACAAAAAGTTCTTTGA+AGG - chr3_1:773773-773792 Msa0342810:CDS 30.0%
TTAAGATGTTATGAGTCTTG+TGG - chr3_1:773847-773866 Msa0342810:five_prime_UTR 30.0%
CAACGGTAATTAACTAATTG+GGG + chr3_1:773873-773892 None:intergenic 30.0%
!! CTAGTTCTGAAAGAAGTTCT+TGG - chr3_1:764616-764635 Msa0342810:three_prime_UTR 35.0%
ATTCAGTGTAAACACGATGA+AGG - chr3_1:764661-764680 Msa0342810:three_prime_UTR 35.0%
!! TGAAGGTTTGGTTCTTGTTA+AGG - chr3_1:764678-764697 Msa0342810:three_prime_UTR 35.0%
CGGCGATTCTATTAATCTTT+CGG - chr3_1:764714-764733 Msa0342810:three_prime_UTR 35.0%
! GTATTGATCATCCTCATGTT+TGG - chr3_1:764779-764798 Msa0342810:exon 35.0%
AGTGAAATCCAAACCTGAAA+AGG + chr3_1:764805-764824 None:intergenic 35.0%
TGTTGTAGTTTGAGCTAGTT+AGG - chr3_1:764908-764927 Msa0342810:CDS 35.0%
!! TGATGGTGGAAACTAAACTT+AGG - chr3_1:765432-765451 Msa0342810:CDS 35.0%
GAAACTAAACTTAGGTGGTT+TGG - chr3_1:765440-765459 Msa0342810:CDS 35.0%
TATCCAACTCACTAATCTCT+AGG + chr3_1:765575-765594 None:intergenic 35.0%
! TGGTACGTGATAGAACATTT+TGG - chr3_1:765601-765620 Msa0342810:CDS 35.0%
!! AGAATCGATTTTGACATGCT+TGG + chr3_1:766065-766084 None:intergenic 35.0%
! GGAACCAAAATTGATTCTAG+AGG + chr3_1:766091-766110 None:intergenic 35.0%
!!! AATTTTGGTTCCTCCAAAAG+TGG - chr3_1:766099-766118 Msa0342810:CDS 35.0%
!! AATGGGCTAAAAGTTCAGTT+AGG + chr3_1:766699-766718 None:intergenic 35.0%
TGTTGAATAGCCAGCTATAT+TGG - chr3_1:766778-766797 Msa0342810:CDS 35.0%
!! TTGTAGTAAAAAGCGGATTG+CGG + chr3_1:766851-766870 None:intergenic 35.0%
TCATGACACTATAGTACTGT+TGG - chr3_1:766892-766911 Msa0342810:CDS 35.0%
CATGACACTATAGTACTGTT+GGG - chr3_1:766893-766912 Msa0342810:CDS 35.0%
ACTATAGTACTGTTGGGTAT+TGG - chr3_1:766899-766918 Msa0342810:CDS 35.0%
CTATAGTACTGTTGGGTATT+GGG - chr3_1:766900-766919 Msa0342810:CDS 35.0%
! TGTCTGTGATTTTGCAGTTT+TGG - chr3_1:767048-767067 Msa0342810:CDS 35.0%
TTTCGTTGAGAAGAAATGGT+TGG - chr3_1:767157-767176 Msa0342810:CDS 35.0%
TTTACAGCTAAAAGCAACTG+TGG + chr3_1:767299-767318 None:intergenic 35.0%
TGCTAATTACGTCCTCAAAT+TGG - chr3_1:767536-767555 Msa0342810:CDS 35.0%
AAATCAGATGGATCGTCATA+CGG + chr3_1:767604-767623 None:intergenic 35.0%
CTAGTTTAATCAAGTCAGCA+GGG + chr3_1:767920-767939 None:intergenic 35.0%
!! AATCCATAGATGGCTTTAGA+GGG + chr3_1:768344-768363 None:intergenic 35.0%
!! AAATCCATAGATGGCTTTAG+AGG + chr3_1:768345-768364 None:intergenic 35.0%
GTGTAATTATGTTGAGGTAG+TGG - chr3_1:768558-768577 Msa0342810:CDS 35.0%
! TTTTGTGTTCCTTCTTGCTA+AGG - chr3_1:768715-768734 Msa0342810:CDS 35.0%
AGTTGAGACAGTTCAAATAG+TGG + chr3_1:768800-768819 None:intergenic 35.0%
TCCAATGGTCCCATTAATAA+GGG - chr3_1:768898-768917 Msa0342810:CDS 35.0%
TAAAATCTGGGTCATGAGTA+TGG + chr3_1:768935-768954 None:intergenic 35.0%
ATGTATCTAAAGGAATACGC+TGG - chr3_1:769063-769082 Msa0342810:intron 35.0%
CGGTAAAAATCATGCAGAAA+TGG + chr3_1:769114-769133 None:intergenic 35.0%
AGATTGTTCCCACAAAATCA+AGG + chr3_1:769239-769258 None:intergenic 35.0%
CATGATCAGTATGAACTTCT+TGG - chr3_1:769439-769458 Msa0342810:intron 35.0%
ACTATATCGAATGCATTTCG+AGG - chr3_1:769601-769620 Msa0342810:intron 35.0%
ATCCGACTGACTATCATATT+CGG + chr3_1:769683-769702 None:intergenic 35.0%
TCCTTTCGTAATGGTAGAAA+GGG + chr3_1:769718-769737 None:intergenic 35.0%
ATCCTTTCGTAATGGTAGAA+AGG + chr3_1:769719-769738 None:intergenic 35.0%
CTCATAGTATCCTTTCGTAA+TGG + chr3_1:769727-769746 None:intergenic 35.0%
AAGGATACTATGAGATGTGA+AGG - chr3_1:769733-769752 Msa0342810:intron 35.0%
!! GAAAGCATTGCAATCACATA+TGG + chr3_1:769895-769914 None:intergenic 35.0%
AATATCTTTGCATCACTAGG+AGG + chr3_1:769991-770010 None:intergenic 35.0%
GGAAATATCTTTGCATCACT+AGG + chr3_1:769994-770013 None:intergenic 35.0%
TATTTATCATCATTCTCCCC+GGG + chr3_1:770212-770231 None:intergenic 35.0%
CTATTTATCATCATTCTCCC+CGG + chr3_1:770213-770232 None:intergenic 35.0%
!! GGTTGTTCAAGAACTTGTTA+TGG - chr3_1:770272-770291 Msa0342810:intron 35.0%
CTAATATTTGGCGTTTGCTT+TGG + chr3_1:770300-770319 None:intergenic 35.0%
CAAAGCAAACGCCAAATATT+AGG - chr3_1:770298-770317 Msa0342810:intron 35.0%
ATCTCGATCATTTAAGAAGG+CGG + chr3_1:770406-770425 None:intergenic 35.0%
CTCATCTCGATCATTTAAGA+AGG + chr3_1:770409-770428 None:intergenic 35.0%
ATGATCGAGATGAGCAATTA+AGG - chr3_1:770415-770434 Msa0342810:intron 35.0%
! CTTAAAGCTTGCTCAATGTA+AGG + chr3_1:770513-770532 None:intergenic 35.0%
TGTTAGAGCCTTAGAATGTT+TGG - chr3_1:770554-770573 Msa0342810:intron 35.0%
! TATGCAAAAATGGGTTCTTC+CGG - chr3_1:770583-770602 Msa0342810:intron 35.0%
! TTTGAAGCAATATCCTCTTC+CGG + chr3_1:770605-770624 None:intergenic 35.0%
! ACAGGTTTTCTATGAAGTCT+TGG - chr3_1:770836-770855 Msa0342810:intron 35.0%
GTTGCTATCAGTATGCATAA+AGG + chr3_1:771099-771118 None:intergenic 35.0%
CATACTGATAGCAACATGTT+GGG - chr3_1:771104-771123 Msa0342810:intron 35.0%
TTTATGTCACCAACCTTTAG+TGG - chr3_1:771170-771189 Msa0342810:CDS 35.0%
! TATAAAGGTATGCCTTCTGA+TGG + chr3_1:771221-771240 None:intergenic 35.0%
CCCAGAGAATTCATTTGTAA+TGG + chr3_1:771299-771318 None:intergenic 35.0%
TTAGTTCATCTTCAATGCCT+TGG - chr3_1:771321-771340 Msa0342810:intron 35.0%
TAGTTCATCTTCAATGCCTT+GGG - chr3_1:771322-771341 Msa0342810:intron 35.0%
!! TTACTAAGTGGATTAACCCA+AGG + chr3_1:771341-771360 None:intergenic 35.0%
! GGTTCTTTTAGCATCAACAA+TGG - chr3_1:771407-771426 Msa0342810:intron 35.0%
AATAGCACATTTCAAGACGT+CGG - chr3_1:771494-771513 Msa0342810:intron 35.0%
GAAATCCTGATAAATCAGCT+TGG + chr3_1:771571-771590 None:intergenic 35.0%
! CAGGATTTCAATCTTTTGCT+CGG - chr3_1:771582-771601 Msa0342810:intron 35.0%
AATCTTGACTGTTGAGTCAT+CGG + chr3_1:771729-771748 None:intergenic 35.0%
ATGACTCAACAGTCAAGATT+TGG - chr3_1:771729-771748 Msa0342810:intron 35.0%
TGACTCAACAGTCAAGATTT+GGG - chr3_1:771730-771749 Msa0342810:intron 35.0%
TGGAAAAAGACATTTCCTTC+AGG - chr3_1:771765-771784 Msa0342810:intron 35.0%
!! ATAAGTTAGCTTTGACCTGA+AGG + chr3_1:771783-771802 None:intergenic 35.0%
TCTGTTGATCATATCTCTAG+AGG - chr3_1:771896-771915 Msa0342810:intron 35.0%
TATTGCTGATGTCACAAAGA+AGG - chr3_1:771949-771968 Msa0342810:intron 35.0%
ACAAAGAAGGATACCAAAGA+AGG - chr3_1:771962-771981 Msa0342810:intron 35.0%
TATCCATGGGGCAATTTAAA+AGG + chr3_1:772000-772019 None:intergenic 35.0%
! AGCTTTTAACGTCCAAGAAT+TGG + chr3_1:772086-772105 None:intergenic 35.0%
TTCTTGTACCTGTAAACTCT+TGG - chr3_1:772209-772228 Msa0342810:intron 35.0%
GAATACTTCCAAGAGTTTAC+AGG + chr3_1:772220-772239 None:intergenic 35.0%
GTTGCAATGAAGTTTCTCTT+TGG - chr3_1:772335-772354 Msa0342810:intron 35.0%
AGTTACAAATATCCCATACC+TGG + chr3_1:772384-772403 None:intergenic 35.0%
CTAGAAAACCAAATCTTCTC+TGG + chr3_1:772492-772511 None:intergenic 35.0%
TTCTGCATCACTGTCATAAT+TGG + chr3_1:772731-772750 None:intergenic 35.0%
TTGCGATTAACATTTCGTCT+TGG + chr3_1:772814-772833 None:intergenic 35.0%
AATAAATCACCACCTGGTAA+GGG + chr3_1:772898-772917 None:intergenic 35.0%
TGATTTGAAGATACGTCGAT+GGG - chr3_1:772930-772949 Msa0342810:intron 35.0%
TTTGTGCTGAACTTCAATCT+CGG - chr3_1:772965-772984 Msa0342810:intron 35.0%
ATTTGTGGACCAAACCTAAA+AGG - chr3_1:773070-773089 Msa0342810:intron 35.0%
!!! TTTCCAACTCCTTTTAGGTT+TGG + chr3_1:773082-773101 None:intergenic 35.0%
! TTTTGGTCATTAGACAACAC+TGG + chr3_1:773200-773219 None:intergenic 35.0%
! GACCTTTTACTCTTATGAAC+AGG - chr3_1:773348-773367 Msa0342810:intron 35.0%
CTCCTGTTCATAAGAGTAAA+AGG + chr3_1:773353-773372 None:intergenic 35.0%
ATGAACAGGAGACAAAAAGA+CGG - chr3_1:773362-773381 Msa0342810:intron 35.0%
TCTTCACATGAACCTATCAA+CGG + chr3_1:773890-773909 None:intergenic 35.0%
CAATAGTTTCTCTCGAATCT+TGG - chr3_1:773920-773939 Msa0342810:five_prime_UTR 35.0%
TAATCGATCCATAATCGCGA+TGG - chr3_1:764519-764538 Msa0342810:intron 40.0%
AATCGATCCATAATCGCGAT+GGG - chr3_1:764520-764539 Msa0342810:intron 40.0%
GTGTAAACACGATGAAGGTT+TGG - chr3_1:764666-764685 Msa0342810:three_prime_UTR 40.0%
ACGGAGGATTTCGATGATTA+AGG - chr3_1:764744-764763 Msa0342810:three_prime_UTR 40.0%
!!! ATGTTTGGCCTTTTCAGGTT+TGG - chr3_1:764794-764813 Msa0342810:CDS 40.0%
! TCAGTAAATCAGCGTCCTTT+TGG - chr3_1:765133-765152 Msa0342810:intron 40.0%
! AAATCAGCGTCCTTTTGGTA+CGG - chr3_1:765138-765157 Msa0342810:intron 40.0%
GCTACTAAAAACAGCTTCTC+AGG - chr3_1:765309-765328 Msa0342810:intron 40.0%
! ACCACAACCACAATTTTCAG+CGG + chr3_1:765385-765404 None:intergenic 40.0%
! CACTGTATGCTTAGTGTTGA+TGG - chr3_1:765415-765434 Msa0342810:CDS 40.0%
!! TGTATGCTTAGTGTTGATGG+TGG - chr3_1:765418-765437 Msa0342810:CDS 40.0%
TGGTGGAAACTAAACTTAGG+TGG - chr3_1:765435-765454 Msa0342810:CDS 40.0%
AGACCTAGAGATTAGTGAGT+TGG - chr3_1:765569-765588 Msa0342810:CDS 40.0%
TTGCTCTGTTGGTGTGTATT+TGG - chr3_1:765827-765846 Msa0342810:intron 40.0%
!! ACAATTGGTTCCACTTTTGG+AGG + chr3_1:766112-766131 None:intergenic 40.0%
! AATTGACTCAGCAATCGGTT+AGG + chr3_1:766352-766371 None:intergenic 40.0%
!! GAAAGGACTTGTTGATACTC+TGG - chr3_1:766445-766464 Msa0342810:CDS 40.0%
AAATTCCGCTACGCTTTAGT+GGG + chr3_1:766810-766829 None:intergenic 40.0%
ATGTTGTCAATCACTGGTAG+CGG + chr3_1:766937-766956 None:intergenic 40.0%
!!! GAAGAAATGGTTGGCTTTTC+AGG - chr3_1:767166-767185 Msa0342810:CDS 40.0%
! AACTGTGGATTACCCAAAAC+CGG + chr3_1:767284-767303 None:intergenic 40.0%
CACAATTAGAAAAGAGGGAG+TGG - chr3_1:767390-767409 Msa0342810:CDS 40.0%
AGCAAGGTAAAGCCAATTTG+AGG + chr3_1:767551-767570 None:intergenic 40.0%
TGAAAGATGCAAAGTCAGCA+AGG + chr3_1:767567-767586 None:intergenic 40.0%
TCGTCATACGGTATGTATGT+GGG + chr3_1:767592-767611 None:intergenic 40.0%
ATCGTCATACGGTATGTATG+TGG + chr3_1:767593-767612 None:intergenic 40.0%
!!! TCTTTTTTCTTTGACACGGG+CGG - chr3_1:767625-767644 Msa0342810:CDS 40.0%
CCTAGTTTAATCAAGTCAGC+AGG + chr3_1:767921-767940 None:intergenic 40.0%
!! CCTGCTGACTTGATTAAACT+AGG - chr3_1:767918-767937 Msa0342810:CDS 40.0%
!! ATCCATAGATGGCTTTAGAG+GGG + chr3_1:768343-768362 None:intergenic 40.0%
! AATCGCTGAACTTTTCCTTG+AGG - chr3_1:768769-768788 Msa0342810:CDS 40.0%
! ATCGCTGAACTTTTCCTTGA+GGG - chr3_1:768770-768789 Msa0342810:CDS 40.0%
GAGACAGTTCAAATAGTGGT+TGG + chr3_1:768796-768815 None:intergenic 40.0%
CTCCAATGGTCCCATTAATA+AGG - chr3_1:768897-768916 Msa0342810:CDS 40.0%
CCAATGGTCCCATTAATAAG+GGG - chr3_1:768899-768918 Msa0342810:CDS 40.0%
AGGTGGAACCCCTTATTAAT+GGG + chr3_1:768910-768929 None:intergenic 40.0%
TTGGTGCAGATACCAGATAT+TGG - chr3_1:768979-768998 Msa0342810:CDS 40.0%
ATCTTGCGGATTCCAATATC+TGG + chr3_1:768994-769013 None:intergenic 40.0%
TCATGTGCTGAATCATCTTG+CGG + chr3_1:769008-769027 None:intergenic 40.0%
! TGCATGATTTTTACCGTTGC+TGG - chr3_1:769118-769137 Msa0342810:intron 40.0%
TTTGTGGGAACAATCTATGC+AGG - chr3_1:769243-769262 Msa0342810:CDS 40.0%
!! TGGAGAACTTTTGGAAGAGA+TGG - chr3_1:769348-769367 Msa0342810:intron 40.0%
AAAAGAGAGGACATAGGCAA+CGG - chr3_1:769409-769428 Msa0342810:intron 40.0%
GTCCGAATATGATAGTCAGT+CGG - chr3_1:769678-769697 Msa0342810:intron 40.0%
GATAGTCAGTCGGATACATT+TGG - chr3_1:769688-769707 Msa0342810:intron 40.0%
ACCCTTTCTACCATTACGAA+AGG - chr3_1:769714-769733 Msa0342810:intron 40.0%
TACTATGAGATGTGAAGGCA+TGG - chr3_1:769738-769757 Msa0342810:intron 40.0%
! TCAGGAAGCATAGAAAGCAT+AGG + chr3_1:770030-770049 None:intergenic 40.0%
ACACTCAATAAGCTTGAGTG+AGG - chr3_1:770128-770147 Msa0342810:intron 40.0%
GATGATGTAAATGGCTTCTG+TGG + chr3_1:770180-770199 None:intergenic 40.0%
ATTTATCATCATTCTCCCCG+GGG + chr3_1:770211-770230 None:intergenic 40.0%
!! AGAAGCGCTCTCCTAATATT+TGG + chr3_1:770312-770331 None:intergenic 40.0%
TCTCGATCATTTAAGAAGGC+GGG + chr3_1:770405-770424 None:intergenic 40.0%
TCGAGATGAGCAATTAAGGA+CGG - chr3_1:770419-770438 Msa0342810:intron 40.0%
!! TTCTCTGAAGCAAGAGATAC+AGG + chr3_1:770780-770799 None:intergenic 40.0%
TAGAAAACCTGTCTTGAGAC+AGG + chr3_1:770828-770847 None:intergenic 40.0%
AGTTGGACTCATTAAAGAGC+TGG - chr3_1:770964-770983 Msa0342810:intron 40.0%
GTTGGACTCATTAAAGAGCT+GGG - chr3_1:770965-770984 Msa0342810:intron 40.0%
GCTCAACAAATTGTTGGAAC+TGG - chr3_1:771011-771030 Msa0342810:CDS 40.0%
GCATACTGATAGCAACATGT+TGG - chr3_1:771103-771122 Msa0342810:intron 40.0%
! TCGGAGAAGTTACAGTTTTC+AGG - chr3_1:771146-771165 Msa0342810:intron 40.0%
ACATATGACAAGCCATCAGA+AGG - chr3_1:771206-771225 Msa0342810:CDS 40.0%
ACCTTTATACTCCTTCAGTG+TGG - chr3_1:771232-771251 Msa0342810:CDS 40.0%
! TCCACACTGAAGGAGTATAA+AGG + chr3_1:771236-771255 None:intergenic 40.0%
!! CTTTGGTGATGGAACTGAAT+TGG + chr3_1:771378-771397 None:intergenic 40.0%
! CCTGAAAAAAGCTTTGGTGA+TGG + chr3_1:771389-771408 None:intergenic 40.0%
!!! CCATCACCAAAGCTTTTTTC+AGG - chr3_1:771386-771405 Msa0342810:intron 40.0%
! GTCTCATTTTCCTTAGGATC+TGG + chr3_1:771464-771483 None:intergenic 40.0%
! AAGGCTGTCTCATTTTCCTT+AGG + chr3_1:771470-771489 None:intergenic 40.0%
! ACTACCCAAGCTGATTTATC+AGG - chr3_1:771563-771582 Msa0342810:intron 40.0%
! GATTTGGGATTCCAAAAAGC+TGG - chr3_1:771745-771764 Msa0342810:intron 40.0%
TTATGTGTAGCAATGCTTCC+AGG - chr3_1:771824-771843 Msa0342810:intron 40.0%
GTGATAGTTGGAGCATATGA+TGG - chr3_1:771857-771876 Msa0342810:intron 40.0%
! GATCATATCTCTAGAGGTCT+AGG - chr3_1:771902-771921 Msa0342810:intron 40.0%
! ACCAAAGAAGGTGCAATACT+TGG - chr3_1:771974-771993 Msa0342810:intron 40.0%
TAGATGAATGCCACAGTTCT+GGG + chr3_1:772044-772063 None:intergenic 40.0%
ATAGATGAATGCCACAGTTC+TGG + chr3_1:772045-772064 None:intergenic 40.0%
AGAACTGTGGCATTCATCTA+TGG - chr3_1:772044-772063 Msa0342810:intron 40.0%
GAACTGTGGCATTCATCTAT+GGG - chr3_1:772045-772064 Msa0342810:intron 40.0%
CGAGGTCAAATTCCAATTCT+TGG - chr3_1:772071-772090 Msa0342810:intron 40.0%
TTAAAAGCTACTCCTGACGA+GGG - chr3_1:772097-772116 Msa0342810:intron 40.0%
GATACAAACCAGTTGGAACA+AGG + chr3_1:772148-772167 None:intergenic 40.0%
!! TGTTCCAACTGGTTTGTATC+AGG - chr3_1:772148-772167 Msa0342810:intron 40.0%
!! GTTCCAACTGGTTTGTATCA+GGG - chr3_1:772149-772168 Msa0342810:intron 40.0%
! CAGGGGTGTAATTACACTTT+GGG - chr3_1:772177-772196 Msa0342810:intron 40.0%
!! GTTGAAGACAGAGAAGCATT+TGG + chr3_1:772286-772305 None:intergenic 40.0%
TACAAATATCCCATACCTGG+TGG + chr3_1:772381-772400 None:intergenic 40.0%
!! GATAGAACTAGGTCTTGTTC+TGG + chr3_1:772436-772455 None:intergenic 40.0%
GTTATGATCAATTTGGCAGG+AGG + chr3_1:772617-772636 None:intergenic 40.0%
AGAAATGTCCGATATGCCTT+GGG - chr3_1:772747-772766 Msa0342810:intron 40.0%
! AGTTGGCTTACTTGAAGGTT+TGG + chr3_1:772779-772798 None:intergenic 40.0%
! TGAGAAGTTGGCTTACTTGA+AGG + chr3_1:772784-772803 None:intergenic 40.0%
CAATAAATCACCACCTGGTA+AGG + chr3_1:772899-772918 None:intergenic 40.0%
! CAGGTGGTGATTTATTGACT+GGG - chr3_1:772902-772921 Msa0342810:intron 40.0%
! AGGTGGTGATTTATTGACTG+GGG - chr3_1:772903-772922 Msa0342810:intron 40.0%
! CTGATTTGAAGATACGTCGA+TGG - chr3_1:772929-772948 Msa0342810:intron 40.0%
! CAAATGCAGTAGCTTTTGTC+AGG + chr3_1:773055-773074 None:intergenic 40.0%
GACAAAAGCTACTGCATTTG+TGG - chr3_1:773055-773074 Msa0342810:intron 40.0%
! CGTCATTTCCAACTCCTTTT+AGG + chr3_1:773087-773106 None:intergenic 40.0%
!!! TTTTGGAGTGCAAGTTGTAC+AGG - chr3_1:773129-773148 Msa0342810:intron 40.0%
CTGTACCATCTAAATGCTGT+TGG - chr3_1:773265-773284 Msa0342810:intron 40.0%
AATAGAATCACGATGGCAAC+CGG + chr3_1:773446-773465 None:intergenic 40.0%
CAGACACAATAGAATCACGA+TGG + chr3_1:773453-773472 None:intergenic 40.0%
TCGTGATTCTATTGTGTCTG+TGG - chr3_1:773453-773472 Msa0342810:intron 40.0%
TACTCTCAAGTGGTAGAGAT+GGG - chr3_1:773503-773522 Msa0342810:intron 40.0%
TACCCTCAAGACAAATCATC+AGG + chr3_1:773814-773833 None:intergenic 40.0%
ATCGATCCATAATCGCGATG+GGG - chr3_1:764521-764540 Msa0342810:intron 45.0%
TTTGTTCCCCATCGCGATTA+TGG + chr3_1:764530-764549 None:intergenic 45.0%
!! ACGTTGATGGTAACTCGTGT+AGG + chr3_1:764591-764610 None:intergenic 45.0%
CTGAAAGAAGTTCTTGGACG+CGG - chr3_1:764622-764641 Msa0342810:three_prime_UTR 45.0%
ATCTTTCGGAGTATGAACGG+AGG - chr3_1:764728-764747 Msa0342810:three_prime_UTR 45.0%
!! TCCTCATGTTTGGCCTTTTC+AGG - chr3_1:764789-764808 Msa0342810:exon 45.0%
ACCTGAAAAGGCCAAACATG+AGG + chr3_1:764793-764812 None:intergenic 45.0%
TCCGCTGAAAATTGTGGTTG+TGG - chr3_1:765381-765400 Msa0342810:CDS 45.0%
GAAAATTGTGGTTGTGGTGC+CGG - chr3_1:765387-765406 Msa0342810:CDS 45.0%
! TTAGGTGGTTTGGCATGTAG+CGG - chr3_1:765450-765469 Msa0342810:CDS 45.0%
ATGGCATGTCGTCAAATCAC+CGG - chr3_1:765501-765520 Msa0342810:CDS 45.0%
TCTAAGTCAGTTTGGTCGCA+TGG + chr3_1:765638-765657 None:intergenic 45.0%
! ATGCGACCAAACTGACTTAG+AGG - chr3_1:765637-765656 Msa0342810:intron 45.0%
! TGCGACCAAACTGACTTAGA+GGG - chr3_1:765638-765657 Msa0342810:intron 45.0%
ATTGCCCCTCTAAGTCAGTT+TGG + chr3_1:765646-765665 None:intergenic 45.0%
CAAATTCCGCTACGCTTTAG+TGG + chr3_1:766811-766830 None:intergenic 45.0%
TGTAAAACAGAGCCACGAGA+AGG - chr3_1:767313-767332 Msa0342810:CDS 45.0%
GTAAAACAGAGCCACGAGAA+GGG - chr3_1:767314-767333 Msa0342810:CDS 45.0%
TTAGAAAAGAGGGAGTGGAG+TGG - chr3_1:767395-767414 Msa0342810:CDS 45.0%
CGGAAGAAGACTCTGTTATC+TGG - chr3_1:767645-767664 Msa0342810:CDS 45.0%
AAGGAAAAGGATCCAACCTC+AGG + chr3_1:767673-767692 None:intergenic 45.0%
TGAAAATGGAGGGGAGATAC+AGG - chr3_1:768305-768324 Msa0342810:CDS 45.0%
!! TTCCCCTCTAAAGCCATCTA+TGG - chr3_1:768338-768357 Msa0342810:CDS 45.0%
GTATGTCTGCAAAACCACAC+TGG + chr3_1:768668-768687 None:intergenic 45.0%
AACTTCTTGCGTATCGCAGA+GGG - chr3_1:768816-768835 Msa0342810:CDS 45.0%
CCCCTTATTAATGGGACCAT+TGG + chr3_1:768902-768921 None:intergenic 45.0%
CAGGTGGAACCCCTTATTAA+TGG + chr3_1:768911-768930 None:intergenic 45.0%
CATTAATAAGGGGTTCCACC+TGG - chr3_1:768909-768928 Msa0342810:CDS 45.0%
TCAGCAGAAAATCGAGACTC+TGG + chr3_1:769042-769061 None:intergenic 45.0%
TCCTCTCCATTCCGATATGA+GGG - chr3_1:769143-769162 Msa0342810:intron 45.0%
CACATACCCTCATATCGGAA+TGG + chr3_1:769152-769171 None:intergenic 45.0%
AAACAGTCATCCGATGATGC+AGG - chr3_1:769316-769335 Msa0342810:CDS 45.0%
!! TGTGACCTCTGGAGAACTTT+TGG - chr3_1:769339-769358 Msa0342810:intron 45.0%
CTCTTCCAAAAGTTCTCCAG+AGG + chr3_1:769347-769366 None:intergenic 45.0%
CATGAAACTCGCGCTTTCTT+TGG + chr3_1:769377-769396 None:intergenic 45.0%
! CAAAGAAAGCGCGAGTTTCA+TGG - chr3_1:769375-769394 Msa0342810:intron 45.0%
CGAAGGAAAAGAGAGGACAT+AGG - chr3_1:769403-769422 Msa0342810:intron 45.0%
GCATTTCCTATTCCTTGCTG+AGG + chr3_1:769520-769539 None:intergenic 45.0%
! ATAGTTTGAAGCAGCTCACC+AGG + chr3_1:769586-769605 None:intergenic 45.0%
CAACTTGACATTGCGTATGC+AGG + chr3_1:769788-769807 None:intergenic 45.0%
! ATGTCAAGTTGCCTCACCTA+AGG - chr3_1:769797-769816 Msa0342810:intron 45.0%
AATTGTTCGTTGCGCTGCTT+TGG - chr3_1:769927-769946 Msa0342810:intron 45.0%
TATGCTTCCTGATGATCCTG+AGG - chr3_1:770038-770057 Msa0342810:intron 45.0%
ACACTTTCCTCAGGATCATC+AGG + chr3_1:770048-770067 None:intergenic 45.0%
! ATGATCCTGAGGAAAGTGTG+AGG - chr3_1:770049-770068 Msa0342810:intron 45.0%
CATATCCTCACACTTTCCTC+AGG + chr3_1:770057-770076 None:intergenic 45.0%
AGCAAGCTTAGCTATGTTGC+TGG + chr3_1:770085-770104 None:intergenic 45.0%
! AAGCTTGCTCTCACTGCTTA+TGG - chr3_1:770096-770115 Msa0342810:intron 45.0%
TCAATAAGCTTGAGTGAGGC+AGG - chr3_1:770132-770151 Msa0342810:intron 45.0%
GTGGCAAACTCAGTTCATCA+AGG + chr3_1:770161-770180 None:intergenic 45.0%
GTCTGGGTGGATGATGTAAA+TGG + chr3_1:770189-770208 None:intergenic 45.0%
GCTGAGGAAATCAATTGCAG+AGG - chr3_1:770251-770270 Msa0342810:intron 45.0%
!! TATTAGGAGAGCGCTTCTTC+AGG - chr3_1:770314-770333 Msa0342810:intron 45.0%
TTTAAGAAGGCGGGAAGGAT+AGG + chr3_1:770396-770415 None:intergenic 45.0%
GATCATTTAAGAAGGCGGGA+AGG + chr3_1:770401-770420 None:intergenic 45.0%
! TGTGGGACAAAGAAGTGTAG+AGG - chr3_1:770476-770495 Msa0342810:intron 45.0%
! AAAATGGGTTCTTCCGGAAG+AGG - chr3_1:770589-770608 Msa0342810:intron 45.0%
GATCTTCGTACCCATTCACT+AGG + chr3_1:770660-770679 None:intergenic 45.0%
CAGGTTGTCTACGAAGGAAA+GGG + chr3_1:770761-770780 None:intergenic 45.0%
ACAGGTTGTCTACGAAGGAA+AGG + chr3_1:770762-770781 None:intergenic 45.0%
GAGATACAGGTTGTCTACGA+AGG + chr3_1:770767-770786 None:intergenic 45.0%
AAAACCTCCTGTCTCAAGAC+AGG - chr3_1:770818-770837 Msa0342810:intron 45.0%
AAAACCTGTCTTGAGACAGG+AGG + chr3_1:770825-770844 None:intergenic 45.0%
TTCTAACATGTCCGAGCTTC+TGG + chr3_1:770868-770887 None:intergenic 45.0%
CTGAAAAGCAACAGGGTTCT+GGG - chr3_1:770988-771007 Msa0342810:intron 45.0%
TGAAAAGCAACAGGGTTCTG+GGG - chr3_1:770989-771008 Msa0342810:intron 45.0%
! TCTGGGGCTCAACAAATTGT+TGG - chr3_1:771005-771024 Msa0342810:CDS 45.0%
TTGTCACTATCAGATAGCGC+TGG + chr3_1:771047-771066 None:intergenic 45.0%
TGTAACTTCTCCGAGAACTG+CGG + chr3_1:771140-771159 None:intergenic 45.0%
CAAACTGTTCGCACCACTAA+AGG + chr3_1:771186-771205 None:intergenic 45.0%
TATACTCCTTCAGTGTGGAC+AGG - chr3_1:771237-771256 Msa0342810:CDS 45.0%
AATGGAGAATCAGAAGCTGC+AGG + chr3_1:771281-771300 None:intergenic 45.0%
TACTAAACAGTTCCACCGAG+TGG - chr3_1:771430-771449 Msa0342810:intron 45.0%
! GATCTGGTTCATGTACCACT+CGG + chr3_1:771448-771467 None:intergenic 45.0%
GGTACATGAACCAGATCCTA+AGG - chr3_1:771451-771470 Msa0342810:intron 45.0%
GTCAAAGCTAACTTATCGCC+TGG - chr3_1:771787-771806 Msa0342810:intron 45.0%
AAAGCTAACTTATCGCCTGG+AGG - chr3_1:771790-771809 Msa0342810:intron 45.0%
AAGCTAACTTATCGCCTGGA+GGG - chr3_1:771791-771810 Msa0342810:intron 45.0%
GCATTGCTACACATAACGCA+TGG + chr3_1:771820-771839 None:intergenic 45.0%
ACTATCACTTGTGCTGAACC+TGG + chr3_1:771845-771864 None:intergenic 45.0%
GGTTCAGCACAAGTGATAGT+TGG - chr3_1:771845-771864 Msa0342810:intron 45.0%
! GCCAAGTATTGCACCTTCTT+TGG + chr3_1:771978-771997 None:intergenic 45.0%
! TGGCCTTTTAAATTGCCCCA+TGG - chr3_1:771994-772013 Msa0342810:intron 45.0%
ATGTATAGCACCCAGAACTG+TGG - chr3_1:772031-772050 Msa0342810:intron 45.0%
GCATTCATCTATGGGATACG+AGG - chr3_1:772053-772072 Msa0342810:intron 45.0%
GTTAAAAGCTACTCCTGACG+AGG - chr3_1:772096-772115 Msa0342810:intron 45.0%
CCAAAGTGTAATTACACCCC+TGG + chr3_1:772179-772198 None:intergenic 45.0%
! CCAGGGGTGTAATTACACTT+TGG - chr3_1:772176-772195 Msa0342810:intron 45.0%
!! GAAGACAGAGAAGCATTTGG+AGG + chr3_1:772283-772302 None:intergenic 45.0%
CTTCTCTGTCTTCAACCACT+AGG - chr3_1:772290-772309 Msa0342810:intron 45.0%
AGAAACTTCATTGCAACCCG+CGG + chr3_1:772332-772351 None:intergenic 45.0%
! TCTTGTACGAACAGGTACTG+AGG - chr3_1:772701-772720 Msa0342810:intron 45.0%
CAGAAATGTCCGATATGCCT+TGG - chr3_1:772746-772765 Msa0342810:intron 45.0%
CTTACTTGAAGGTTTGGCCA+AGG + chr3_1:772773-772792 None:intergenic 45.0%
CTTGGATCTGACTGAGAAGT+TGG + chr3_1:772796-772815 None:intergenic 45.0%
CCAGTCAATAAATCACCACC+TGG + chr3_1:772904-772923 None:intergenic 45.0%
CCAGGTGGTGATTTATTGAC+TGG - chr3_1:772901-772920 Msa0342810:intron 45.0%
! GGTGGTGATTTATTGACTGG+GGG - chr3_1:772904-772923 Msa0342810:intron 45.0%
TACGTCGATGGGATCATTAC+AGG - chr3_1:772941-772960 Msa0342810:intron 45.0%
GGACCAAACCTAAAAGGAGT+TGG - chr3_1:773076-773095 Msa0342810:intron 45.0%
GTCATTAGACAACACTGGAC+TGG + chr3_1:773195-773214 None:intergenic 45.0%
!! AATTGCCTTTGGTGTCAGCT+TGG + chr3_1:773398-773417 None:intergenic 45.0%
CACTTGAGAGTAGAAGTCTC+TGG + chr3_1:773495-773514 None:intergenic 45.0%
CAGAGACTTCTACTCTCAAG+TGG - chr3_1:773493-773512 Msa0342810:intron 45.0%
CTACTCTCAAGTGGTAGAGA+TGG - chr3_1:773502-773521 Msa0342810:intron 45.0%
ACTCTCAAGTGGTAGAGATG+GGG - chr3_1:773504-773523 Msa0342810:intron 45.0%
CTACAGTTCTACTAGCTACC+AGG + chr3_1:773594-773613 None:intergenic 45.0%
! ATGTTGACGGTGTCAGTAGT+CGG - chr3_1:773712-773731 Msa0342810:CDS 45.0%
!! GTTCTTTGAAGGTGTCGTCT+TGG - chr3_1:773784-773803 Msa0342810:exon 45.0%
! TGGCCTGATGATTTGTCTTG+AGG - chr3_1:773808-773827 Msa0342810:five_prime_UTR 45.0%
! GGCCTGATGATTTGTCTTGA+GGG - chr3_1:773809-773828 Msa0342810:five_prime_UTR 45.0%
!! AAAAAATAAAAAAAAATAAG+TGG + chr3_1:767206-767225 None:intergenic 5.0%
AACGACGCAAGTATCAGCGT+CGG - chr3_1:764558-764577 Msa0342810:three_prime_UTR 50.0%
CTAAGCATACAGTGACGCAC+CGG + chr3_1:765409-765428 None:intergenic 50.0%
! GCGACCAAACTGACTTAGAG+GGG - chr3_1:765639-765658 Msa0342810:intron 50.0%
!! AGCGGATTGCGGAACAATAG+CGG + chr3_1:766840-766859 None:intergenic 50.0%
ATCACAGACACTGCCACATG+AGG + chr3_1:767038-767057 None:intergenic 50.0%
CATGACAAACTCCCTTCTCG+TGG + chr3_1:767328-767347 None:intergenic 50.0%
CACGAGAAGGGAGTTTGTCA+TGG - chr3_1:767326-767345 Msa0342810:CDS 50.0%
ACTCTGTTATCTGGCACCTG+AGG - chr3_1:767654-767673 Msa0342810:CDS 50.0%
TGTTATCTGGCACCTGAGGT+TGG - chr3_1:767658-767677 Msa0342810:CDS 50.0%
TTCAGCAGTGACACACTGGA+AGG + chr3_1:768184-768203 None:intergenic 50.0%
AAATGGAGGGGAGATACAGG+TGG - chr3_1:768308-768327 Msa0342810:CDS 50.0%
GTTCAGCGATTACACACCTG+AGG + chr3_1:768760-768779 None:intergenic 50.0%
! CAAATAGTGGTTGGCCCTCA+AGG + chr3_1:768787-768806 None:intergenic 50.0%
CAACTTCTTGCGTATCGCAG+AGG - chr3_1:768815-768834 Msa0342810:CDS 50.0%
AATGGAGAGGACTCCAGCAA+CGG + chr3_1:769134-769153 None:intergenic 50.0%
GTCCTCTCCATTCCGATATG+AGG - chr3_1:769142-769161 Msa0342810:intron 50.0%
ACCCTCATATCGGAATGGAG+AGG + chr3_1:769147-769166 None:intergenic 50.0%
! ACTATGCCAGAGTGCTTTCC+AGG - chr3_1:769270-769289 Msa0342810:CDS 50.0%
!! GTATCTCCTGGAAAGCACTC+TGG + chr3_1:769279-769298 None:intergenic 50.0%
AGAGGTCACACCTGCATCAT+CGG + chr3_1:769329-769348 None:intergenic 50.0%
CGAGTTTCATGGACTCACGA+AGG - chr3_1:769386-769405 Msa0342810:intron 50.0%
GGACTCACGAAGGAAAAGAG+AGG - chr3_1:769396-769415 Msa0342810:intron 50.0%
! TCAAGTTGCCTCACCTAAGG+AGG - chr3_1:769800-769819 Msa0342810:intron 50.0%
CAAGTTGCCTCACCTAAGGA+GGG - chr3_1:769801-769820 Msa0342810:intron 50.0%
GGCAGCTGTACTCTTGTTGA+AGG - chr3_1:769822-769841 Msa0342810:intron 50.0%
GTGACATTCTGCCCATAGTG+CGG - chr3_1:769959-769978 Msa0342810:intron 50.0%
TGACATTCTGCCCATAGTGC+GGG - chr3_1:769960-769979 Msa0342810:intron 50.0%
ATTTCCTCAGCTGCAGAAGC+TGG + chr3_1:770242-770261 None:intergenic 50.0%
! AGAGCGCTTCTTCAGGACAT+CGG - chr3_1:770321-770340 Msa0342810:intron 50.0%
CATATGAATCCACTGCACCC+AGG + chr3_1:770716-770735 None:intergenic 50.0%
! AAGGGCGTATAACAGGAGCA+AGG + chr3_1:770743-770762 None:intergenic 50.0%
! CGAAGGAAAGGGCGTATAAC+AGG + chr3_1:770750-770769 None:intergenic 50.0%
CTTGGAGAACTCCAGAAGCT+CGG - chr3_1:770854-770873 Msa0342810:intron 50.0%
AGCTGGGCTGAAAAGCAACA+GGG - chr3_1:770981-771000 Msa0342810:intron 50.0%
GCTGAAAAGCAACAGGGTTC+TGG - chr3_1:770987-771006 Msa0342810:intron 50.0%
!! TATCAGATAGCGCTGGCTGT+TGG + chr3_1:771040-771059 None:intergenic 50.0%
ACAACGTGATCCGCAGTTCT+CGG - chr3_1:771127-771146 Msa0342810:intron 50.0%
CTGTTCGCACCACTAAAGGT+TGG + chr3_1:771182-771201 None:intergenic 50.0%
AGTGTGGACAGGAGAGGAAT+GGG - chr3_1:771248-771267 Msa0342810:CDS 50.0%
CATCCATCCCTGATTCTGGT+TGG - chr3_1:771606-771625 Msa0342810:intron 50.0%
CGACCCTGATACAAACCAGT+TGG + chr3_1:772155-772174 None:intergenic 50.0%
GTTTGTATCAGGGTCGTCCA+GGG - chr3_1:772159-772178 Msa0342810:intron 50.0%
TTTGTATCAGGGTCGTCCAG+GGG - chr3_1:772160-772179 Msa0342810:intron 50.0%
!! GAGAAGCATTTGGAGGAGGA+AGG + chr3_1:772276-772295 None:intergenic 50.0%
!! GACAGAGAAGCATTTGGAGG+AGG + chr3_1:772280-772299 None:intergenic 50.0%
CACATAAACAAGGGGCCTAG+TGG + chr3_1:772308-772327 None:intergenic 50.0%
! CACTAGGCCCCTTGTTTATG+TGG - chr3_1:772306-772325 Msa0342810:intron 50.0%
!! GTACGAACAGGTACTGAGGA+CGG - chr3_1:772705-772724 Msa0342810:intron 50.0%
ACGTGCGAATACCAGGAAGA+CGG + chr3_1:772870-772889 None:intergenic 50.0%
GGAAGTAACGTGCGAATACC+AGG + chr3_1:772877-772896 None:intergenic 50.0%
ACGTTACTTCCCTTACCAGG+TGG - chr3_1:772886-772905 Msa0342810:intron 50.0%
TGCAACCAAGCTGACACCAA+AGG - chr3_1:773390-773409 Msa0342810:intron 50.0%
GCAGCTGCAAGAATTGCCTT+TGG + chr3_1:773409-773428 None:intergenic 50.0%
!! TTTGAAGGTGTCGTCTTGGC+TGG - chr3_1:773788-773807 Msa0342810:exon 50.0%
GCATGTCGTCAAATCACCGG+CGG - chr3_1:765504-765523 Msa0342810:CDS 55.0%
TGGGACAGCGCCAATATAGC+TGG + chr3_1:766791-766810 None:intergenic 55.0%
GCTGTCCCACTAAAGCGTAG+CGG - chr3_1:766802-766821 Msa0342810:CDS 55.0%
AAGAGGGAGTGGAGTGGAGA+AGG - chr3_1:767401-767420 Msa0342810:CDS 55.0%
! TGCTTTAGGCTAGACACCCG+AGG - chr3_1:767996-768015 Msa0342810:CDS 55.0%
GCACTTCAGCAGTGACACAC+TGG + chr3_1:768188-768207 None:intergenic 55.0%
TCTGGGTCATGAGTATGGCC+AGG + chr3_1:768930-768949 None:intergenic 55.0%
GATGATGCAGGTGTGACCTC+TGG - chr3_1:769328-769347 Msa0342810:CDS 55.0%
ATTCCTTGCTGAGGACCAGC+TGG + chr3_1:769511-769530 None:intergenic 55.0%
GCTGGTCCTCAGCAAGGAAT+AGG - chr3_1:769511-769530 Msa0342810:CDS 55.0%
AGAGTACAGCTGCCCTCCTT+AGG + chr3_1:769816-769835 None:intergenic 55.0%
GCGCAACGAACAATTGCTGC+TGG + chr3_1:769922-769941 None:intergenic 55.0%
! TGTTCGTTGCGCTGCTTTGG+AGG - chr3_1:769930-769949 Msa0342810:intron 55.0%
GGAGGAAACTCCCGCACTAT+GGG + chr3_1:769973-769992 None:intergenic 55.0%
AGGAGGAAACTCCCGCACTA+TGG + chr3_1:769974-769993 None:intergenic 55.0%
TACATCATCCACCCAGACCC+CGG - chr3_1:770191-770210 Msa0342810:intron 55.0%
ATGTCCAGCTTCTGCAGCTG+AGG - chr3_1:770235-770254 Msa0342810:intron 55.0%
TGCTGCTAGTAGTGAGAGCC+TGG - chr3_1:770695-770714 Msa0342810:CDS 55.0%
GCTGCTAGTAGTGAGAGCCT+GGG - chr3_1:770696-770715 Msa0342810:CDS 55.0%
GAGCTGGGCTGAAAAGCAAC+AGG - chr3_1:770980-770999 Msa0342810:intron 55.0%
TCCTTCAGTGTGGACAGGAG+AGG - chr3_1:771242-771261 Msa0342810:CDS 55.0%
TCCTCTCCTGTCCACACTGA+AGG + chr3_1:771246-771265 None:intergenic 55.0%
CAGTGTGGACAGGAGAGGAA+TGG - chr3_1:771247-771266 Msa0342810:CDS 55.0%
GGAGAATCAGAAGCTGCAGG+AGG + chr3_1:771278-771297 None:intergenic 55.0%
CTGGTTCATGTACCACTCGG+TGG + chr3_1:771445-771464 None:intergenic 55.0%
CGGACATCCATCCCTGATTC+TGG - chr3_1:771602-771621 Msa0342810:intron 55.0%
CCTCCAACCAGAATCAGGGA+TGG + chr3_1:771612-771631 None:intergenic 55.0%
! CCATCCCTGATTCTGGTTGG+AGG - chr3_1:771609-771628 Msa0342810:intron 55.0%
GTGGCCTCCAACCAGAATCA+GGG + chr3_1:771616-771635 None:intergenic 55.0%
! ATTCTGGTTGGAGGCCACGT+GGG - chr3_1:771618-771637 Msa0342810:intron 55.0%
TGACAGCTGAACGATGCTCC+TGG + chr3_1:771661-771680 None:intergenic 55.0%
ATAACGCATGGCTTCCCTCC+AGG + chr3_1:771808-771827 None:intergenic 55.0%
TACGCCTTGTCCCTAGCATC+AGG - chr3_1:772121-772140 Msa0342810:intron 55.0%
ACGCCTTGTCCCTAGCATCA+GGG - chr3_1:772122-772141 Msa0342810:intron 55.0%
GGAACAAGGCCCTGATGCTA+GGG + chr3_1:772134-772153 None:intergenic 55.0%
TGGAACAAGGCCCTGATGCT+AGG + chr3_1:772135-772154 None:intergenic 55.0%
!! CATCAGGGCCTTGTTCCAAC+TGG - chr3_1:772137-772156 Msa0342810:intron 55.0%
GGTTTGTATCAGGGTCGTCC+AGG - chr3_1:772158-772177 Msa0342810:intron 55.0%
ACCCGCGGCCACATAAACAA+GGG + chr3_1:772317-772336 None:intergenic 55.0%
AACCCGCGGCCACATAAACA+AGG + chr3_1:772318-772337 None:intergenic 55.0%
AGAGAATGCTAGCTGCCACC+AGG - chr3_1:772363-772382 Msa0342810:intron 55.0%
ATGCTAGCTGCCACCAGGTA+TGG - chr3_1:772368-772387 Msa0342810:intron 55.0%
TGCTAGCTGCCACCAGGTAT+GGG - chr3_1:772369-772388 Msa0342810:intron 55.0%
GTGCGAATACCAGGAAGACG+GGG + chr3_1:772868-772887 None:intergenic 55.0%
CGTGCGAATACCAGGAAGAC+GGG + chr3_1:772869-772888 None:intergenic 55.0%
CGCACGTTACTTCCCTTACC+AGG - chr3_1:772883-772902 Msa0342810:intron 55.0%
GGTGTCAGCTTGGTTGCAAG+AGG + chr3_1:773388-773407 None:intergenic 55.0%
AGAATCACGATGGCAACCGG+CGG + chr3_1:773443-773462 None:intergenic 55.0%
TGGTAGAGATGGGGCCATCA+AGG - chr3_1:773513-773532 Msa0342810:intron 55.0%
GAGATGGGGCCATCAAGGTT+TGG - chr3_1:773518-773537 Msa0342810:intron 55.0%
GGGTCATGAGTATGGCCAGG+TGG + chr3_1:768927-768946 None:intergenic 60.0%
AGTCCAGCTGGTCCTCAGCA+AGG - chr3_1:769505-769524 Msa0342810:CDS 60.0%
ACAGCTGCCCTCCTTAGGTG+AGG + chr3_1:769811-769830 None:intergenic 60.0%
ACATCATCCACCCAGACCCC+GGG - chr3_1:770192-770211 Msa0342810:intron 60.0%
CATCATTCTCCCCGGGGTCT+GGG + chr3_1:770205-770224 None:intergenic 60.0%
TCATCATTCTCCCCGGGGTC+TGG + chr3_1:770206-770225 None:intergenic 60.0%
TAGTGAGAGCCTGGGTGCAG+TGG - chr3_1:770704-770723 Msa0342810:CDS 60.0%
CGTGGCCTCCAACCAGAATC+AGG + chr3_1:771617-771636 None:intergenic 60.0%
! GATTCTGGTTGGAGGCCACG+TGG - chr3_1:771617-771636 Msa0342810:intron 60.0%
! TTCTGGTTGGAGGCCACGTG+GGG - chr3_1:771619-771638 Msa0342810:intron 60.0%
TGTGCAACCAACACCCCACG+TGG + chr3_1:771635-771654 None:intergenic 60.0%
!! GGTGTTGGTTGCACACCTCC+AGG - chr3_1:771640-771659 Msa0342810:intron 60.0%
CAGCTGAACGATGCTCCTGG+AGG + chr3_1:771658-771677 None:intergenic 60.0%
AGGCCCTGATGCTAGGGACA+AGG + chr3_1:772128-772147 None:intergenic 60.0%
! GCCCCTTGTTTATGTGGCCG+CGG - chr3_1:772312-772331 Msa0342810:intron 60.0%
CCCGCGGCCACATAAACAAG+GGG + chr3_1:772316-772335 None:intergenic 60.0%
! CCCCTTGTTTATGTGGCCGC+GGG - chr3_1:772313-772332 Msa0342810:intron 60.0%
GTCCGATATGCCTTGGGCCT+TGG - chr3_1:772753-772772 Msa0342810:intron 60.0%
GGCCAAGGCCCAAGGCATAT+CGG + chr3_1:772758-772777 None:intergenic 60.0%
GAAGGTTTGGCCAAGGCCCA+AGG + chr3_1:772766-772785 None:intergenic 60.0%
ATACCAGGAAGACGGGGAGG+AGG + chr3_1:772862-772881 None:intergenic 60.0%
CGAATACCAGGAAGACGGGG+AGG + chr3_1:772865-772884 None:intergenic 60.0%
ATGGCAACCGGCGGAATCAG+TGG + chr3_1:773434-773453 None:intergenic 60.0%
CGTCAAATCACCGGCGGCAG+AGG - chr3_1:765510-765529 Msa0342810:CDS 65.0%
GCTAGGTCTTCCTCTGCCGC+CGG + chr3_1:765523-765542 None:intergenic 65.0%
CATCATCCACCCAGACCCCG+GGG - chr3_1:770193-770212 Msa0342810:intron 65.0%
TTGGAGGCCACGTGGGGTGT+TGG - chr3_1:771625-771644 Msa0342810:intron 65.0%
GACAAGGCGTAGCCCTCGTC+AGG + chr3_1:772112-772131 None:intergenic 65.0%
GAACCTCCTCCCCGTCTTCC+TGG - chr3_1:772856-772875 Msa0342810:intron 65.0%
!! GCTGCTGCCACTGATTCCGC+CGG - chr3_1:773424-773443 Msa0342810:intron 65.0%
CATTCTCCCCGGGGTCTGGG+TGG + chr3_1:770202-770221 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 764377 773961 764377 ID=Msa0342810;Name=Msa0342810
chr3_1 mRNA 764377 773961 764377 ID=Msa0342810-mRNA-1;Parent=Msa0342810;Name=Msa0342810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=161|1|1|1|0.90|0.83|12|395|1536
chr3_1 exon 764377 764527 764377 ID=Msa0342810-mRNA-1:exon:145;Parent=Msa0342810-mRNA-1
chr3_1 exon 764548 764968 764548 ID=Msa0342810-mRNA-1:exon:144;Parent=Msa0342810-mRNA-1
chr3_1 exon 765188 765287 765188 ID=Msa0342810-mRNA-1:exon:143;Parent=Msa0342810-mRNA-1
chr3_1 exon 765376 765623 765376 ID=Msa0342810-mRNA-1:exon:142;Parent=Msa0342810-mRNA-1
chr3_1 exon 765954 769073 765954 ID=Msa0342810-mRNA-1:exon:141;Parent=Msa0342810-mRNA-1
chr3_1 exon 769174 769350 769174 ID=Msa0342810-mRNA-1:exon:140;Parent=Msa0342810-mRNA-1
chr3_1 exon 769470 769575 769470 ID=Msa0342810-mRNA-1:exon:139;Parent=Msa0342810-mRNA-1
chr3_1 exon 769962 770041 769962 ID=Msa0342810-mRNA-1:exon:138;Parent=Msa0342810-mRNA-1
chr3_1 exon 770663 770823 770663 ID=Msa0342810-mRNA-1:exon:137;Parent=Msa0342810-mRNA-1
chr3_1 exon 770991 771036 770991 ID=Msa0342810-mRNA-1:exon:136;Parent=Msa0342810-mRNA-1
chr3_1 exon 771151 771273 771151 ID=Msa0342810-mRNA-1:exon:135;Parent=Msa0342810-mRNA-1
chr3_1 exon 773528 773961 773528 ID=Msa0342810-mRNA-1:exon:134;Parent=Msa0342810-mRNA-1
chr3_1 five_prime_UTR 773801 773961 773801 ID=Msa0342810-mRNA-1:five_prime_utr;Parent=Msa0342810-mRNA-1
chr3_1 CDS 773528 773800 773528 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 771151 771273 771151 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 770991 771036 770991 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 770663 770823 770663 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 769962 770041 769962 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 769470 769575 769470 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 769174 769350 769174 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 765954 769073 765954 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 765376 765623 765376 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 765188 765287 765188 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 CDS 764792 764968 764792 ID=Msa0342810-mRNA-1:cds;Parent=Msa0342810-mRNA-1
chr3_1 three_prime_UTR 764548 764791 764548 ID=Msa0342810-mRNA-1:three_prime_utr;Parent=Msa0342810-mRNA-1
chr3_1 three_prime_UTR 764377 764527 764377 ID=Msa0342810-mRNA-1:three_prime_utr;Parent=Msa0342810-mRNA-1
Gene Sequence

>Msa0342810

ATGGGGAACAAAATCGCACGAACGACGCAAGTATCAGCGTCGGAGTATTACCTACACGAGTTACCATCAACGTATAATCTAGTTCTGAAAGAAGTTCTTGGACGCGGTAGATTTTTCAAATCGATTCAGTGTAAACACGATGAAGGTTTGGTTCTTGTTAAGGTTTATTTCAAACGCGGCGATTCTATTAATCTTTCGGAGTATGAACGGAGGATTTCGATGATTAAGGAGATTTTTAGTAGTATTGATCATCCTCATGTTTGGCCTTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGACTAAGCACTCGACCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCACGAGAAGGGAGTTTGTCATGGTGATATCAAGTGTGAAAATGTGCTAATTACGTCCTCAAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATACCGTATGACGATCCATCTGATTTCTCTTTTTTCTTTGACACGGGCGGAAGAAGACTCTGTTATCTGGCACCTGAGAGATTTTATGAAAATGGAGGGGAGATACAGGTGGCACAAGATTCCCCTCTAAAGCCATCTATGGATTTATTTGCTGTTGGGTGTGTAATCGCTGAACTTTTCCTTGAGGGCCAACCACTATTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGCAAGATGATTCAGCACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAATGTATCTAAAGGAATACGCTGGAGTTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTCCATTCCGATATGAGGGTTTTACTATGCCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAACAGTCATCCGATGATGCAGGTGTGACCTCTGGAGAACTTTTGGAAGAGATGGTTGCCAAAGAAAGCGCGAGTTTCATGGACTCACGAAGGAAAAGAGAGGACATAGGCAACGGCTTAGTTCATGATCAGTATGAACTTCTTGGTGATATTAATAGCTTACTGAGGGATGCTAAAAATAATAATAAGAGTCCAGCTGGTCCTCAGCAAGGAATAGGAAATGCACAGAATTCAACCTTTCCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATATCGAATGCATTTCGAGGAAATGATCATCCCTTTTTAAAAAGTATTACTATGAAAGACTTAAATTCATTGATGTCCGAATATGATAGTCAGTCGGATACATTTGGAACACCCTTTCTACCATTACGAAAGGATACTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTAAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTGATTCCATATGTGATTGCAATGCTTTCTGATCCAGCAGCAATTGTTCGTTGCGCTGCTTTGGAGGCTTTGTGTGACATTCTGCCCATAGTGCGGGAGTTTCCTCCTAGTGATGCAAAGATATTTCCTGAGTATATTTTTCCTATGCTTTCTATGCTTCCTGATGATCCTGAGGAAAGTGTGAGGATATGTTATGCCAGCAACATAGCTAAGCTTGCTCTCACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGAGTCCTTGATGAACTGAGTTTGCCACAGAAGCCATTTACATCATCCACCCAGACCCCGGGGAGAATGATGATAAATAGTGATGTCCAGCTTCTGCAGCTGAGGAAATCAATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACGCCAAATATTAGGAGAGCGCTTCTTCAGGACATCGGTAAACTTTGCTACTTTTTTGGTGTGAGACAGAGTAATGACACTCTCTTACCTATCCTTCCCGCCTTCTTAAATGATCGAGATGAGCAATTAAGGACGGTATTCTATGAGAAGATTGTTTATGTTTGCTTTTTTGTGGGACAAAGAAGTGTAGAGGAATATCTATTACCTTACATTGAGCAAGCTTTAAGTGACATGACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGGCTATTCTATGCAAAAATGGGTTCTTCCGGAAGAGGATATTGCTTCAAATGATAGAGCGCGCCTTTGCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCAGTTGTGTCTTTCATTGCTGCTAGTAGTGAGAGCCTGGGTGCAGTGGATTCATATGTTTTCCTTGCTCCTGTTATACGCCCTTTCCTTCGTAGACAACCTGTATCTCTTGCTTCAGAGAAAGCTCTTTTGTCATGTTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTGGAGAACTCCAGAAGCTCGGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAGTCTAAAATATGGGAAATGGATTTACTTATAAAAGGAATTGATGAGTTGGACTCATTAAAGAGCTGGGCTGAAAAGCAACAGGGTTCTGGGGCTCAACAAATTGTTGGAACTGGCATCCAACAGCCAGCGCTATCTGATAGTGACAAAGCTGAGTCTAAATTTAGAGATATGGGGGCCTTTATGCATACTGATAGCAACATGTTGGGACAACGTGATCCGCAGTTCTCGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAACCTTTAGTGGTGCGAACAGTTTGACATATGACAAGCCATCAGAAGGCATACCTTTATACTCCTTCAGTGTGGACAGGAGAGGAATGGGAATACCTCCTGCAGCTTCTGATTCTCCATTACAAATGAATTCTCTGGGTGTTAGTTCATCTTCAATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAATTTGGCCAATTCAGTTCCATCACCAAAGCTTTTTTCAGGTTCTTTTAGCATCAACAATGGTACTAAACAGTTCCACCGAGTGGTACATGAACCAGATCCTAAGGAAAATGAGACAGCCTTTCTCAATAGCACATTTCAAGACGTCGGACTATCTTCTAATAATAAAGGTACATCAATTTCACTAGAAGATGCTACTACCCAAGCTGATTTATCAGGATTTCAATCTTTTGCTCGGACATCCATCCCTGATTCTGGTTGGAGGCCACGTGGGGTGTTGGTTGCACACCTCCAGGAGCATCGTTCAGCTGTCAGCGACATAGCTGTTTCTTCTGACAATAGCTTTTTTGTGAGTGCATCCGATGACTCAACAGTCAAGATTTGGGATTCCAAAAAGCTGGAAAAAGACATTTCCTTCAGGTCAAAGCTAACTTATCGCCTGGAGGGAAGCCATGCGTTATGTGTAGCAATGCTTCCAGGTTCAGCACAAGTGATAGTTGGAGCATATGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTGATGTCACAAAGAAGGATACCAAAGAAGGTGCAATACTTGGCCTTTTAAATTGCCCCATGGATAATAACAGCATTATGTATAGCACCCAGAACTGTGGCATTCATCTATGGGATACGAGGTCAAATTCCAATTCTTGGACGTTAAAAGCTACTCCTGACGAGGGCTACGCCTTGTCCCTAGCATCAGGGCCTTGTTCCAACTGGTTTGTATCAGGGTCGTCCAGGGGTGTAATTACACTTTGGGATCTGAGATTTCTTGTACCTGTAAACTCTTGGAAGTATTCTCTTGCTTGTCCTATAGAAAAGATTTGTCTCTTCCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACCACTAGGCCCCTTGTTTATGTGGCCGCGGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGCTAGCTGCCACCAGGTACTGAGGACGGCCAATTATGACAGTGATGCAGAAATGTCCGATATGCCTTGGGCCTTGGCCAAACCTTCAAGTAAGCCAACTTCTCAGTCAGATCCAAGACGAAATGTTAATCGCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCCCGTCTTCCTGGTATTCGCACGTTACTTCCCTTACCAGGTGGTGATTTATTGACTGGGGGCACTGATTTGAAGATACGTCGATGGGATCATTACAGTCCTGACAAAAGCTACTGCATTTGTGGACCAAACCTAAAAGGAGTTGGAAATGACGACTTTTACGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAGACGGCCTCTTGCAACCAAGCTGACACCAAAGGCAATTCTTGCAGCTGCTGCCACTGATTCCGCCGGTTGCCATCGTGATTCTATTGTGTCTGTGGCTTCAGTTAAGTTAAACCAGAGACTTCTACTCTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA
Protein sequence

>Msa0342810

MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSINLSEYERRISMIKEIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEIQVAQDSPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEMYLKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESASFMDSRRKREDIGNGLVHDQYELLGDINSLLRDAKNNNKSPAGPQQGIGNAQNSTFPENLKSLQSPGELLQTISNAFRGNDHPFLKSITMKDLNSLMSEYDSQSDTFGTPFLPLRKDTMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRCAALEALCDILPIVREFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSLPQKPFTSSTQTPGRMMINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLAILCKNGFFRKRILLQMIERAFALLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKIWEMDLLIKGIDELDSLKSWAEKQQGSGAQQIVGTGIQQPALSDSDKAESKFRDMGAFMHTDSNMLGQRDPQFSEKLQFSGFMSPTFSGANSLTYDKPSEGIPLYSFSVDRRGMGIPPAASDSPLQMNSLGVSSSSMPWVNPLSKSFNLANSVPSPKLFSGSFSINNGTKQFHRVVHEPDPKENETAFLNSTFQDVGLSSNNKGTSISLEDATTQADLSGFQSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAVSSDNSFFVSASDDSTVKIWDSKKLEKDISFRSKLTYRLEGSHALCVAMLPGSAQVIVGAYDGFIHMFSVDHISRGLGNVVEKYSGIADVTKKDTKEGAILGLLNCPMDNNSIMYSTQNCGIHLWDTRSNSNSWTLKATPDEGYALSLASGPCSNWFVSGSSRGVITLWDLRFLVPVNSWKYSLACPIEKICLFLPPPNASLSSTTRPLVYVAAGCNEVSLWNAENASCHQVLRTANYDSDAEMSDMPWALAKPSSKPTSQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRRWDHYSPDKSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLATKLTPKAILAAAATDSAGCHRDSIVSVASVKLNQRLLLSSGRDGAIKVWK*