Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248300 | KEH16120.1 | 53.942 | 241 | 96 | 4 | 236 | 475 | 182 | 408 | 1.63e-78 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa1248300 | 0.801184 | 1.014764e-48 | -8.615850e-47 |
| Msa0016580 | Msa1248300 | 0.808241 | 3.411963e-50 | -8.615850e-47 |
| Msa0064970 | Msa1248300 | 0.813552 | 2.415876e-51 | -8.615850e-47 |
| Msa0105260 | Msa1248300 | 0.809356 | 1.970099e-50 | -8.615850e-47 |
| Msa0110260 | Msa1248300 | 0.837203 | 5.968589e-57 | -8.615850e-47 |
| Msa0110270 | Msa1248300 | 0.822811 | 1.939476e-53 | -8.615850e-47 |
| Msa0639610 | Msa1248300 | 0.803890 | 2.808933e-49 | -8.615850e-47 |
| Msa0712300 | Msa1248300 | 0.800429 | 1.447579e-48 | -8.615850e-47 |
| Msa0729800 | Msa1248300 | 0.860817 | 1.585540e-63 | -8.615850e-47 |
| Msa0733290 | Msa1248300 | 0.829941 | 3.883523e-55 | -8.615850e-47 |
| Msa0738490 | Msa1248300 | 0.818185 | 2.236771e-52 | -8.615850e-47 |
| Msa0743810 | Msa1248300 | 0.834863 | 2.343028e-56 | -8.615850e-47 |
| Msa0745060 | Msa1248300 | 0.808857 | 2.520185e-50 | -8.615850e-47 |
| Msa0748970 | Msa1248300 | 0.866533 | 2.660470e-65 | -8.615850e-47 |
| Msa0768290 | Msa1248300 | 0.814593 | 1.423788e-51 | -8.615850e-47 |
| Msa0768370 | Msa1248300 | 0.830655 | 2.599330e-55 | -8.615850e-47 |
| Msa0783160 | Msa1248300 | 0.820427 | 6.898168e-53 | -8.615850e-47 |
| Msa0784300 | Msa1248300 | 0.802181 | 6.335979e-49 | -8.615850e-47 |
| Msa0787120 | Msa1248300 | 0.804630 | 1.970271e-49 | -8.615850e-47 |
| Msa0808010 | Msa1248300 | 0.850522 | 1.608746e-60 | -8.615850e-47 |
| Msa0808020 | Msa1248300 | 0.844300 | 8.235585e-59 | -8.615850e-47 |
| Msa0814870 | Msa1248300 | 0.812930 | 3.308653e-51 | -8.615850e-47 |
| Msa0824390 | Msa1248300 | 0.808947 | 2.410637e-50 | -8.615850e-47 |
| Msa0825860 | Msa1248300 | 0.808780 | 2.617145e-50 | -8.615850e-47 |
| Msa0830980 | Msa1248300 | 0.801529 | 8.625970e-49 | -8.615850e-47 |
| Msa0200000 | Msa1248300 | 0.835683 | 1.455135e-56 | -8.615850e-47 |
| Msa0227480 | Msa1248300 | 0.813993 | 1.931587e-51 | -8.615850e-47 |
| Msa1248300 | Msa1248310 | 0.931724 | 2.473000e-94 | -8.615850e-47 |
| Msa1248300 | Msa1248370 | 0.921092 | 5.567623e-88 | -8.615850e-47 |
| Msa1248300 | Msa1269670 | 0.803938 | 2.745458e-49 | -8.615850e-47 |
| Msa1248300 | Msa1270230 | 0.836469 | 9.188504e-57 | -8.615850e-47 |
| Msa1248300 | Msa1283330 | 0.815072 | 1.114623e-51 | -8.615850e-47 |
| Msa1248300 | Msa1285930 | 0.822550 | 2.230674e-53 | -8.615850e-47 |
| Msa1248300 | Msa1287800 | 0.827692 | 1.359533e-54 | -8.615850e-47 |
| Msa1248300 | Msa1287810 | 0.836600 | 8.509423e-57 | -8.615850e-47 |
| Msa1248300 | Msa1289420 | 0.913318 | 7.073648e-84 | -8.615850e-47 |
| Msa1248300 | Msa1289430 | 0.850073 | 2.149534e-60 | -8.615850e-47 |
| Msa1248300 | Msa1307890 | 0.800834 | 1.196682e-48 | -8.615850e-47 |
| Msa1248300 | Msa1320300 | 0.835448 | 1.668150e-56 | -8.615850e-47 |
| Msa1248300 | Msa1340590 | 0.833526 | 5.070247e-56 | -8.615850e-47 |
| Msa1248300 | Msa1344520 | 0.829058 | 6.365795e-55 | -8.615850e-47 |
| Msa1248300 | Msa1397580 | 0.832085 | 1.156083e-55 | -8.615850e-47 |
| Msa1248300 | Msa1422180 | 0.818272 | 2.137018e-52 | -8.615850e-47 |
| Msa0391180 | Msa1248300 | 0.803110 | 4.076455e-49 | -8.615850e-47 |
| Msa0397780 | Msa1248300 | 0.820107 | 8.166099e-53 | -8.615850e-47 |
| Msa0414420 | Msa1248300 | 0.827607 | 1.424607e-54 | -8.615850e-47 |
| Msa0434000 | Msa1248300 | 0.832739 | 7.959919e-56 | -8.615850e-47 |
| Msa0450000 | Msa1248300 | 0.846612 | 1.947386e-59 | -8.615850e-47 |
| Msa0452900 | Msa1248300 | 0.833898 | 4.092944e-56 | -8.615850e-47 |
| Msa0454530 | Msa1248300 | 0.807518 | 4.861965e-50 | -8.615850e-47 |
| Msa0989060 | Msa1248300 | 0.805764 | 1.140071e-49 | -8.615850e-47 |
| Msa0989620 | Msa1248300 | 0.802990 | 4.315298e-49 | -8.615850e-47 |
| Msa0997500 | Msa1248300 | 0.825719 | 4.020700e-54 | -8.615850e-47 |
| Msa0998680 | Msa1248300 | 0.813037 | 3.134121e-51 | -8.615850e-47 |
| Msa1016280 | Msa1248300 | 0.824399 | 8.241903e-54 | -8.615850e-47 |
| Msa1023050 | Msa1248300 | 0.808086 | 3.681076e-50 | -8.615850e-47 |
| Msa1025360 | Msa1248300 | 0.839568 | 1.466200e-57 | -8.615850e-47 |
| Msa1025370 | Msa1248300 | 0.837434 | 5.208955e-57 | -8.615850e-47 |
| Msa1044830 | Msa1248300 | 0.839324 | 1.695846e-57 | -8.615850e-47 |
| Msa1044840 | Msa1248300 | 0.839504 | 1.523032e-57 | -8.615850e-47 |
| Msa1054020 | Msa1248300 | 0.832212 | 1.075347e-55 | -8.615850e-47 |
| Msa1060840 | Msa1248300 | 0.817261 | 3.614948e-52 | -8.615850e-47 |
| Msa1068420 | Msa1248300 | 0.830762 | 2.445865e-55 | -8.615850e-47 |
| Msa1092990 | Msa1248300 | 0.806938 | 6.449025e-50 | -8.615850e-47 |
| Msa1100980 | Msa1248300 | 0.803501 | 3.382610e-49 | -8.615850e-47 |
| Msa0267000 | Msa1248300 | 0.829234 | 5.769271e-55 | -8.615850e-47 |
| Msa0267010 | Msa1248300 | 0.832996 | 6.872043e-56 | -8.615850e-47 |
| Msa0290870 | Msa1248300 | 0.805873 | 1.081821e-49 | -8.615850e-47 |
| Msa0331450 | Msa1248300 | 0.801347 | 9.400907e-49 | -8.615850e-47 |
| Msa0342240 | Msa1248300 | 0.810397 | 1.176545e-50 | -8.615850e-47 |
| Msa0342750 | Msa1248300 | 0.852813 | 3.607816e-61 | -8.615850e-47 |
| Msa0342810 | Msa1248300 | 0.844575 | 6.943917e-59 | -8.615850e-47 |
| Msa0351040 | Msa1248300 | 0.811964 | 5.378155e-51 | -8.615850e-47 |
| Msa0360510 | Msa1248300 | 0.818932 | 1.514083e-52 | -8.615850e-47 |
| Msa1121200 | Msa1248300 | 0.809475 | 1.858189e-50 | -8.615850e-47 |
| Msa1121480 | Msa1248300 | 0.831132 | 1.985156e-55 | -8.615850e-47 |
| Msa1146110 | Msa1248300 | 0.807809 | 4.215886e-50 | -8.615850e-47 |
| Msa1150370 | Msa1248300 | 0.816089 | 6.616883e-52 | -8.615850e-47 |
| Msa1192640 | Msa1248300 | 0.803550 | 3.304609e-49 | -8.615850e-47 |
| Msa0491590 | Msa1248300 | 0.834506 | 2.880886e-56 | -8.615850e-47 |
| Msa0493000 | Msa1248300 | 0.828171 | 1.042835e-54 | -8.615850e-47 |
| Msa0537720 | Msa1248300 | 0.814505 | 1.489190e-51 | -8.615850e-47 |
| Msa0848960 | Msa1248300 | 0.828025 | 1.130658e-54 | -8.615850e-47 |
| Msa0858980 | Msa1248300 | 0.816874 | 4.416453e-52 | -8.615850e-47 |
| Msa0888370 | Msa1248300 | 0.827937 | 1.187134e-54 | -8.615850e-47 |
| Msa0896080 | Msa1248300 | 0.807034 | 6.156213e-50 | -8.615850e-47 |
| Msa0899430 | Msa1248300 | 0.829750 | 4.322642e-55 | -8.615850e-47 |
| Msa0899450 | Msa1248300 | 0.822755 | 1.999379e-53 | -8.615850e-47 |
| Msa0900910 | Msa1248300 | 0.820212 | 7.728728e-53 | -8.615850e-47 |
| Msa0900970 | Msa1248300 | 0.841932 | 3.519955e-58 | -8.615850e-47 |
| Msa0901020 | Msa1248300 | 0.830806 | 2.386124e-55 | -8.615850e-47 |
| Msa0901070 | Msa1248300 | 0.852951 | 3.295441e-61 | -8.615850e-47 |
| Msa0901090 | Msa1248300 | 0.814823 | 1.265775e-51 | -8.615850e-47 |
| Msa0913060 | Msa1248300 | 0.803742 | 3.014398e-49 | -8.615850e-47 |
| Msa0924050 | Msa1248300 | 0.812603 | 3.902601e-51 | -8.615850e-47 |
| Msa0924060 | Msa1248300 | 0.852849 | 3.524386e-61 | -8.615850e-47 |
| Msa0958550 | Msa1248300 | 0.823272 | 1.514605e-53 | -8.615850e-47 |
| Msa0966770 | Msa1248300 | 0.800311 | 1.529434e-48 | -8.615850e-47 |
| Msa0967280 | Msa1248300 | 0.938607 | 5.082939e-99 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248300 | MtrunA17_Chr2g0287651 | 50.980 | 102 | 49 | 1 | 1 | 101 | 498 | 599 | 3.33e-24 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 82 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAACAGTGGGTACTTTC+TGG | 0.209213 | 8_2:-42023166 | Msa1248300:CDS |
| TGTGCTTCTTTGGCTTGTTC+AGG | 0.269948 | 8_2:+42023477 | None:intergenic |
| TAGATTCCAGCGTCAGAAAA+AGG | 0.311901 | 8_2:-42023008 | Msa1248300:CDS |
| GAAAAGGCCGACTTTATTCT+TGG | 0.356033 | 8_2:-42022389 | Msa1248300:CDS |
| TGCAACTACGAAGGGAAATC+TGG | 0.367738 | 8_2:-42022449 | Msa1248300:CDS |
| GAAAGTACCCACTGTTCAAT+TGG | 0.387744 | 8_2:+42023169 | None:intergenic |
| GTTTCTTCTCTCTTCTGATT+AGG | 0.391776 | 8_2:+42023103 | None:intergenic |
| AGTCTCCTTGATGCCCTAAC+AGG | 0.395341 | 8_2:+42023423 | None:intergenic |
| ACCTTTCTTCACAACTGAAA+GGG | 0.413641 | 8_2:+42022871 | None:intergenic |
| GGGAAATCTGGAAATTCCTT+TGG | 0.413835 | 8_2:-42022437 | Msa1248300:CDS |
| CCCCTTTCAGTTGTGAAGAA+AGG | 0.414874 | 8_2:-42022872 | Msa1248300:CDS |
| CAGCACAGGGGATGAAAACT+TGG | 0.418956 | 8_2:+42024560 | None:intergenic |
| CGTGTGGTGAGGCACCTGTT+AGG | 0.420139 | 8_2:-42023437 | Msa1248300:CDS |
| TCTCAAACCTTTGTTTATCC+AGG | 0.423510 | 8_2:-42022603 | Msa1248300:CDS |
| TAGTTGCAAAGAACTACATT+AGG | 0.424085 | 8_2:+42022464 | None:intergenic |
| GGAAGATTTCACTGAAGAAA+TGG | 0.424932 | 8_2:-42022723 | Msa1248300:CDS |
| TGCTATTATGTGATGCATAA+TGG | 0.432853 | 8_2:-42022683 | Msa1248300:CDS |
| TGAGGCTGCTGAAATCTATA+CGG | 0.433917 | 8_2:-42024511 | Msa1248300:CDS |
| TGGTTATCTTGAAGGAAATC+AGG | 0.434205 | 8_2:-42022663 | Msa1248300:CDS |
| GCCGACTTTATTCTTGGCAG+TGG | 0.447519 | 8_2:-42022383 | Msa1248300:CDS |
| ATAAACAAGGTGCTGGTTGA+TGG | 0.458276 | 8_2:-42022560 | Msa1248300:CDS |
| AAGCCAAAGAAGCACAGAAA+AGG | 0.460028 | 8_2:-42023470 | Msa1248300:CDS |
| ATTGTTCATTGTCGTGACTT+TGG | 0.463049 | 8_2:+42023301 | None:intergenic |
| GGAAAGAGAACTACTGGAAA+TGG | 0.470137 | 8_2:-42023142 | Msa1248300:CDS |
| TATCGAAGATAGTTGGTTGT+TGG | 0.472017 | 8_2:+42022930 | None:intergenic |
| CTAAGCGTATCGAAGATAGT+TGG | 0.472645 | 8_2:+42022923 | None:intergenic |
| TGGTGCTGTTGAAGTTGACC+TGG | 0.479682 | 8_2:-42022417 | Msa1248300:CDS |
| CAGGCTAAAATTAATGATGT+TGG | 0.480834 | 8_2:-42022584 | Msa1248300:CDS |
| CAGAAGAGAGAAGAAACATA+TGG | 0.489506 | 8_2:-42023097 | Msa1248300:CDS |
| AGCCAGAAAGACGTGGGAAA+AGG | 0.492341 | 8_2:-42023897 | Msa1248300:CDS |
| GGATGTTGCATGTGATGATC+AGG | 0.492457 | 8_2:+42022626 | None:intergenic |
| TGCAGATGAGTTGTCAGCAC+AGG | 0.496005 | 8_2:+42024546 | None:intergenic |
| TGACGTTATATCAGAAGTTA+CGG | 0.500910 | 8_2:-42022753 | Msa1248300:CDS |
| TCTGGTGGAAAGAGAACTAC+TGG | 0.502715 | 8_2:-42023148 | Msa1248300:CDS |
| GATATAACGTCATATTCAAT+CGG | 0.503187 | 8_2:+42022764 | None:intergenic |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 8_2:-42024471 | Msa1248300:CDS |
| TGTAACATCTTTCAAAGCAT+CGG | 0.509473 | 8_2:+42022985 | None:intergenic |
| GGAAAGATGCTCTCAGTGGC+AGG | 0.510720 | 8_2:+42022896 | None:intergenic |
| TGCATCACATAATAGCACTT+TGG | 0.521664 | 8_2:+42022689 | None:intergenic |
| GACCTTTCTTCACAACTGAA+AGG | 0.523246 | 8_2:+42022870 | None:intergenic |
| TAGGGCATCAAGGAGACTAA+TGG | 0.526483 | 8_2:-42023418 | Msa1248300:CDS |
| ATTGAGGCTAGCTTCAGAAT+CGG | 0.527357 | 8_2:+42022811 | None:intergenic |
| ATTCTTGGCAGTGGAATCAA+AGG | 0.531010 | 8_2:-42022374 | Msa1248300:CDS |
| GTGTGGTGAGGCACCTGTTA+GGG | 0.531715 | 8_2:-42023436 | Msa1248300:CDS |
| ATGCATAATGGTTATCTTGA+AGG | 0.532784 | 8_2:-42022671 | Msa1248300:CDS |
| AGTTGACCTGGTGATAGAAA+AGG | 0.534493 | 8_2:-42022405 | Msa1248300:CDS |
| TCACATAATAGCACTTTGGC+TGG | 0.535841 | 8_2:+42022693 | None:intergenic |
| TTGACAAAATATATTGAGGA+AGG | 0.543857 | 8_2:-42024393 | Msa1248300:CDS |
| ATATGATAAGAATTATATTG+AGG | 0.552416 | 8_2:+42022795 | None:intergenic |
| CCTTTCTTCACAACTGAAAG+GGG | 0.552673 | 8_2:+42022872 | None:intergenic |
| GTCAACTTCAACAGCACCAA+AGG | 0.553675 | 8_2:+42022421 | None:intergenic |
| TAGTTCTTTGCAACTACGAA+GGG | 0.555401 | 8_2:-42022457 | Msa1248300:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.564043 | 8_2:+42024547 | None:intergenic |
| TGGCAGGATAAGAACATAGA+CGG | 0.565361 | 8_2:-42023519 | Msa1248300:intron |
| AAGAAACATATGGTTTGAAG+AGG | 0.567037 | 8_2:-42023087 | Msa1248300:intron |
| TCCCAGTCCAATTGAACAGT+GGG | 0.576738 | 8_2:-42023176 | Msa1248300:intron |
| AGGCACCTGTTAGGGCATCA+AGG | 0.577424 | 8_2:-42023428 | Msa1248300:CDS |
| ATCAGAAGTTACGGAAGATG+AGG | 0.588403 | 8_2:-42022744 | Msa1248300:CDS |
| GTAGTTCTTTGCAACTACGA+AGG | 0.588949 | 8_2:-42022458 | Msa1248300:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 8_2:-42023904 | Msa1248300:CDS |
| TGTTGGAATAAACAAGGTGC+TGG | 0.593438 | 8_2:-42022567 | Msa1248300:CDS |
| TTGCAAAGAACTACATTAGG+TGG | 0.594667 | 8_2:+42022467 | None:intergenic |
| GAAGTTGACAAAATATATTG+AGG | 0.598462 | 8_2:-42024397 | Msa1248300:CDS |
| TCCACTGCCAAGAATAAAGT+CGG | 0.603354 | 8_2:+42022382 | None:intergenic |
| GAACAGTGGGTACTTTCTGG+TGG | 0.607005 | 8_2:-42023163 | Msa1248300:CDS |
| TTCTTCACAACTGAAAGGGG+AGG | 0.609468 | 8_2:+42022875 | None:intergenic |
| TGGATAAACAAAGGTTTGAG+AGG | 0.614232 | 8_2:+42022605 | None:intergenic |
| TTGGCTAGCATGATGAGACA+TGG | 0.619223 | 8_2:+42023812 | None:intergenic |
| GAAAGGTGTTGCAATGAGTG+TGG | 0.626883 | 8_2:-42024454 | Msa1248300:CDS |
| CAAGAAATTTGAATCTCGAG+AGG | 0.629020 | 8_2:-42024319 | Msa1248300:intron |
| TAATGATGTTGGAATAAACA+AGG | 0.630345 | 8_2:-42022573 | Msa1248300:CDS |
| TCTGCATTGTCTTGAACGTG+AGG | 0.635704 | 8_2:-42024529 | Msa1248300:CDS |
| GTTAGCAAGAATGTTGACAA+AGG | 0.636775 | 8_2:-42022959 | Msa1248300:CDS |
| GAAAAGAAGAACGTGTGGTG+AGG | 0.652176 | 8_2:-42023448 | Msa1248300:CDS |
| AAAAGGAAAAGAAGAACGTG+TGG | 0.672916 | 8_2:-42023453 | Msa1248300:CDS |
| GGATAAGAACATAGACGGCG+AGG | 0.683636 | 8_2:-42023514 | Msa1248300:CDS |
| GTCCCAGTCCAATTGAACAG+TGG | 0.689907 | 8_2:-42023177 | Msa1248300:intron |
| AACAAGGTGCTGGTTGATGG+AGG | 0.696072 | 8_2:-42022557 | Msa1248300:CDS |
| AGGTGTTGCAATGAGTGTGG+AGG | 0.696599 | 8_2:-42024451 | Msa1248300:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 8_2:-42023903 | Msa1248300:CDS |
| GGGAGGAAAGATGCTCTCAG+TGG | 0.713449 | 8_2:+42022892 | None:intergenic |
| CAGATGAGTTGTCAGCACAG+GGG | 0.772263 | 8_2:+42024548 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGTTTAAATTCAAACT+TGG | + | chr8_2:42023774-42023793 | None:intergenic | 15.0% |
| !! | ATATGATAAGAATTATATTG+AGG | + | chr8_2:42024181-42024200 | None:intergenic | 15.0% |
| !! | ATTAAGTTTAAATTCAAACT+TGG | + | chr8_2:42023774-42023793 | None:intergenic | 15.0% |
| !! | ATATGATAAGAATTATATTG+AGG | + | chr8_2:42024181-42024200 | None:intergenic | 15.0% |
| !! | CCTTCAACAAAAAAAAATAT+GGG | + | chr8_2:42022689-42022708 | None:intergenic | 20.0% |
| !! | TCCTTCAACAAAAAAAAATA+TGG | + | chr8_2:42022690-42022709 | None:intergenic | 20.0% |
| !! | AATATTTGATTATATTGCGT+TGG | - | chr8_2:42022733-42022752 | Msa1248300:CDS | 20.0% |
| !! | AAATTGAGAAGTTAATCAAA+AGG | + | chr8_2:42023433-42023452 | None:intergenic | 20.0% |
| !!! | TTGATTAACTTCTCAATTTT+TGG | - | chr8_2:42023434-42023453 | Msa1248300:CDS | 20.0% |
| !! | CTTAAAAAACAACATATATG+AGG | + | chr8_2:42023622-42023641 | None:intergenic | 20.0% |
| !!! | CTCATATATGTTGTTTTTTA+AGG | - | chr8_2:42023620-42023639 | Msa1248300:intron | 20.0% |
| !!! | ACATGGATAATTTTTGATTT+AGG | - | chr8_2:42023646-42023665 | Msa1248300:intron | 20.0% |
| !! | CCTTCAACAAAAAAAAATAT+GGG | + | chr8_2:42022689-42022708 | None:intergenic | 20.0% |
| !! | TCCTTCAACAAAAAAAAATA+TGG | + | chr8_2:42022690-42022709 | None:intergenic | 20.0% |
| !! | AATATTTGATTATATTGCGT+TGG | - | chr8_2:42022733-42022752 | Msa1248300:CDS | 20.0% |
| !! | AAATTGAGAAGTTAATCAAA+AGG | + | chr8_2:42023433-42023452 | None:intergenic | 20.0% |
| !!! | TTGATTAACTTCTCAATTTT+TGG | - | chr8_2:42023434-42023453 | Msa1248300:CDS | 20.0% |
| !! | CTTAAAAAACAACATATATG+AGG | + | chr8_2:42023622-42023641 | None:intergenic | 20.0% |
| !!! | CTCATATATGTTGTTTTTTA+AGG | - | chr8_2:42023620-42023639 | Msa1248300:intron | 20.0% |
| !!! | ACATGGATAATTTTTGATTT+AGG | - | chr8_2:42023646-42023665 | Msa1248300:intron | 20.0% |
| ! | GAAGTTGACAAAATATATTG+AGG | - | chr8_2:42022576-42022595 | Msa1248300:CDS | 25.0% |
| ! | TTGACAAAATATATTGAGGA+AGG | - | chr8_2:42022580-42022599 | Msa1248300:CDS | 25.0% |
| !!! | CCCATATTTTTTTTTGTTGA+AGG | - | chr8_2:42022686-42022705 | Msa1248300:CDS | 25.0% |
| ! | CGCAATATAATCAAATATTC+TGG | + | chr8_2:42022732-42022751 | None:intergenic | 25.0% |
| ! | CCTATATTTAAACACATTGT+TGG | + | chr8_2:42023374-42023393 | None:intergenic | 25.0% |
| ! | CCAACAATGTGTTTAAATAT+AGG | - | chr8_2:42023371-42023390 | Msa1248300:intron | 25.0% |
| ! | ATATATGAGGTCAAGAATAT+GGG | + | chr8_2:42023609-42023628 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTTAAGGTTAACA+TGG | - | chr8_2:42023629-42023648 | Msa1248300:intron | 25.0% |
| !!! | TGGATAATTTTTGATTTAGG+AGG | - | chr8_2:42023649-42023668 | Msa1248300:intron | 25.0% |
| ! | GATATAACGTCATATTCAAT+CGG | + | chr8_2:42024212-42024231 | None:intergenic | 25.0% |
| ! | TAATGATGTTGGAATAAACA+AGG | - | chr8_2:42024400-42024419 | Msa1248300:CDS | 25.0% |
| !!! | ATCTTTTTCAAGAGAAAATG+TGG | + | chr8_2:42024461-42024480 | None:intergenic | 25.0% |
| ! | GAAGTTGACAAAATATATTG+AGG | - | chr8_2:42022576-42022595 | Msa1248300:CDS | 25.0% |
| ! | TTGACAAAATATATTGAGGA+AGG | - | chr8_2:42022580-42022599 | Msa1248300:CDS | 25.0% |
| !!! | CCCATATTTTTTTTTGTTGA+AGG | - | chr8_2:42022686-42022705 | Msa1248300:CDS | 25.0% |
| ! | CGCAATATAATCAAATATTC+TGG | + | chr8_2:42022732-42022751 | None:intergenic | 25.0% |
| ! | CCTATATTTAAACACATTGT+TGG | + | chr8_2:42023374-42023393 | None:intergenic | 25.0% |
| ! | CCAACAATGTGTTTAAATAT+AGG | - | chr8_2:42023371-42023390 | Msa1248300:intron | 25.0% |
| ! | ATATATGAGGTCAAGAATAT+GGG | + | chr8_2:42023609-42023628 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTTAAGGTTAACA+TGG | - | chr8_2:42023629-42023648 | Msa1248300:intron | 25.0% |
| !!! | TGGATAATTTTTGATTTAGG+AGG | - | chr8_2:42023649-42023668 | Msa1248300:intron | 25.0% |
| ! | GATATAACGTCATATTCAAT+CGG | + | chr8_2:42024212-42024231 | None:intergenic | 25.0% |
| ! | TAATGATGTTGGAATAAACA+AGG | - | chr8_2:42024400-42024419 | Msa1248300:CDS | 25.0% |
| !!! | ATCTTTTTCAAGAGAAAATG+TGG | + | chr8_2:42024461-42024480 | None:intergenic | 25.0% |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr8_2:42022502-42022521 | Msa1248300:CDS | 30.0% | |
| CAAAAAAAAATATGGGAGCA+TGG | + | chr8_2:42022682-42022701 | None:intergenic | 30.0% | |
| TATATTGCGTTGGACAAAAA+AGG | - | chr8_2:42022743-42022762 | Msa1248300:CDS | 30.0% | |
| TTGTAAGAATGTTCAAACTG+TGG | - | chr8_2:42022777-42022796 | Msa1248300:CDS | 30.0% | |
| GGTACTTACATTCATATTCA+CGG | + | chr8_2:42023353-42023372 | None:intergenic | 30.0% | |
| !!! | TTAACTTCTCAATTTTTGGC+AGG | - | chr8_2:42023438-42023457 | Msa1248300:CDS | 30.0% |
| CATATATGAGGTCAAGAATA+TGG | + | chr8_2:42023610-42023629 | None:intergenic | 30.0% | |
| AAGAAACATATGGTTTGAAG+AGG | - | chr8_2:42023886-42023905 | Msa1248300:CDS | 30.0% | |
| ATCCCATGACAAAAACTTAA+TGG | - | chr8_2:42023940-42023959 | Msa1248300:intron | 30.0% | |
| TGTAACATCTTTCAAAGCAT+CGG | + | chr8_2:42023991-42024010 | None:intergenic | 30.0% | |
| TGACGTTATATCAGAAGTTA+CGG | - | chr8_2:42024220-42024239 | Msa1248300:intron | 30.0% | |
| TGCTATTATGTGATGCATAA+TGG | - | chr8_2:42024290-42024309 | Msa1248300:intron | 30.0% | |
| ATGCATAATGGTTATCTTGA+AGG | - | chr8_2:42024302-42024321 | Msa1248300:intron | 30.0% | |
| !! | ATTTTAGCCTGGATAAACAA+AGG | + | chr8_2:42024380-42024399 | None:intergenic | 30.0% |
| !! | CAACATCATTAATTTTAGCC+TGG | + | chr8_2:42024391-42024410 | None:intergenic | 30.0% |
| CAGGCTAAAATTAATGATGT+TGG | - | chr8_2:42024389-42024408 | Msa1248300:CDS | 30.0% | |
| TAGTTGCAAAGAACTACATT+AGG | + | chr8_2:42024512-42024531 | None:intergenic | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr8_2:42022502-42022521 | Msa1248300:CDS | 30.0% | |
| CAAAAAAAAATATGGGAGCA+TGG | + | chr8_2:42022682-42022701 | None:intergenic | 30.0% | |
| TATATTGCGTTGGACAAAAA+AGG | - | chr8_2:42022743-42022762 | Msa1248300:CDS | 30.0% | |
| TTGTAAGAATGTTCAAACTG+TGG | - | chr8_2:42022777-42022796 | Msa1248300:CDS | 30.0% | |
| GGTACTTACATTCATATTCA+CGG | + | chr8_2:42023353-42023372 | None:intergenic | 30.0% | |
| !!! | TTAACTTCTCAATTTTTGGC+AGG | - | chr8_2:42023438-42023457 | Msa1248300:CDS | 30.0% |
| CATATATGAGGTCAAGAATA+TGG | + | chr8_2:42023610-42023629 | None:intergenic | 30.0% | |
| AAGAAACATATGGTTTGAAG+AGG | - | chr8_2:42023886-42023905 | Msa1248300:CDS | 30.0% | |
| ATCCCATGACAAAAACTTAA+TGG | - | chr8_2:42023940-42023959 | Msa1248300:intron | 30.0% | |
| TGTAACATCTTTCAAAGCAT+CGG | + | chr8_2:42023991-42024010 | None:intergenic | 30.0% | |
| TGACGTTATATCAGAAGTTA+CGG | - | chr8_2:42024220-42024239 | Msa1248300:intron | 30.0% | |
| TGCTATTATGTGATGCATAA+TGG | - | chr8_2:42024290-42024309 | Msa1248300:intron | 30.0% | |
| ATGCATAATGGTTATCTTGA+AGG | - | chr8_2:42024302-42024321 | Msa1248300:intron | 30.0% | |
| !! | ATTTTAGCCTGGATAAACAA+AGG | + | chr8_2:42024380-42024399 | None:intergenic | 30.0% |
| !! | CAACATCATTAATTTTAGCC+TGG | + | chr8_2:42024391-42024410 | None:intergenic | 30.0% |
| CAGGCTAAAATTAATGATGT+TGG | - | chr8_2:42024389-42024408 | Msa1248300:CDS | 30.0% | |
| TAGTTGCAAAGAACTACATT+AGG | + | chr8_2:42024512-42024531 | None:intergenic | 30.0% | |
| CAAGAAATTTGAATCTCGAG+AGG | - | chr8_2:42022654-42022673 | Msa1248300:CDS | 35.0% | |
| ! | TTTCCTTTTCTGTGCTTCTT+TGG | + | chr8_2:42023509-42023528 | None:intergenic | 35.0% |
| AAAAGGAAAAGAAGAACGTG+TGG | - | chr8_2:42023520-42023539 | Msa1248300:intron | 35.0% | |
| ATTGTTCATTGTCGTGACTT+TGG | + | chr8_2:42023675-42023694 | None:intergenic | 35.0% | |
| ACTCTGTCATCTTTGTTAGA+TGG | + | chr8_2:42023731-42023750 | None:intergenic | 35.0% | |
| GTTTCTTCTCTCTTCTGATT+AGG | + | chr8_2:42023873-42023892 | None:intergenic | 35.0% | |
| CAGAAGAGAGAAGAAACATA+TGG | - | chr8_2:42023876-42023895 | Msa1248300:CDS | 35.0% | |
| TCCATAACGTCAACTACAAA+GGG | - | chr8_2:42023913-42023932 | Msa1248300:intron | 35.0% | |
| ! | CGCCATTAAGTTTTTGTCAT+GGG | + | chr8_2:42023945-42023964 | None:intergenic | 35.0% |
| ! | ACGCCATTAAGTTTTTGTCA+TGG | + | chr8_2:42023946-42023965 | None:intergenic | 35.0% |
| GTTAGCAAGAATGTTGACAA+AGG | - | chr8_2:42024014-42024033 | Msa1248300:intron | 35.0% | |
| TATCGAAGATAGTTGGTTGT+TGG | + | chr8_2:42024046-42024065 | None:intergenic | 35.0% | |
| ACCTTTCTTCACAACTGAAA+GGG | + | chr8_2:42024105-42024124 | None:intergenic | 35.0% | |
| GGAAGATTTCACTGAAGAAA+TGG | - | chr8_2:42024250-42024269 | Msa1248300:intron | 35.0% | |
| TGCATCACATAATAGCACTT+TGG | + | chr8_2:42024287-42024306 | None:intergenic | 35.0% | |
| TGGTTATCTTGAAGGAAATC+AGG | - | chr8_2:42024310-42024329 | Msa1248300:intron | 35.0% | |
| TGGATAAACAAAGGTTTGAG+AGG | + | chr8_2:42024371-42024390 | None:intergenic | 35.0% | |
| ! | TCTCAAACCTTTGTTTATCC+AGG | - | chr8_2:42024370-42024389 | Msa1248300:CDS | 35.0% |
| TTGCAAAGAACTACATTAGG+TGG | + | chr8_2:42024509-42024528 | None:intergenic | 35.0% | |
| TAGTTCTTTGCAACTACGAA+GGG | - | chr8_2:42024516-42024535 | Msa1248300:CDS | 35.0% | |
| CAAGAAATTTGAATCTCGAG+AGG | - | chr8_2:42022654-42022673 | Msa1248300:CDS | 35.0% | |
| ! | TTTCCTTTTCTGTGCTTCTT+TGG | + | chr8_2:42023509-42023528 | None:intergenic | 35.0% |
| AAAAGGAAAAGAAGAACGTG+TGG | - | chr8_2:42023520-42023539 | Msa1248300:intron | 35.0% | |
| ATTGTTCATTGTCGTGACTT+TGG | + | chr8_2:42023675-42023694 | None:intergenic | 35.0% | |
| ACTCTGTCATCTTTGTTAGA+TGG | + | chr8_2:42023731-42023750 | None:intergenic | 35.0% | |
| GTTTCTTCTCTCTTCTGATT+AGG | + | chr8_2:42023873-42023892 | None:intergenic | 35.0% | |
| CAGAAGAGAGAAGAAACATA+TGG | - | chr8_2:42023876-42023895 | Msa1248300:CDS | 35.0% | |
| TCCATAACGTCAACTACAAA+GGG | - | chr8_2:42023913-42023932 | Msa1248300:intron | 35.0% | |
| ! | CGCCATTAAGTTTTTGTCAT+GGG | + | chr8_2:42023945-42023964 | None:intergenic | 35.0% |
| ! | ACGCCATTAAGTTTTTGTCA+TGG | + | chr8_2:42023946-42023965 | None:intergenic | 35.0% |
| GTTAGCAAGAATGTTGACAA+AGG | - | chr8_2:42024014-42024033 | Msa1248300:intron | 35.0% | |
| TATCGAAGATAGTTGGTTGT+TGG | + | chr8_2:42024046-42024065 | None:intergenic | 35.0% | |
| ACCTTTCTTCACAACTGAAA+GGG | + | chr8_2:42024105-42024124 | None:intergenic | 35.0% | |
| GGAAGATTTCACTGAAGAAA+TGG | - | chr8_2:42024250-42024269 | Msa1248300:intron | 35.0% | |
| TGCATCACATAATAGCACTT+TGG | + | chr8_2:42024287-42024306 | None:intergenic | 35.0% | |
| TGGTTATCTTGAAGGAAATC+AGG | - | chr8_2:42024310-42024329 | Msa1248300:intron | 35.0% | |
| TGGATAAACAAAGGTTTGAG+AGG | + | chr8_2:42024371-42024390 | None:intergenic | 35.0% | |
| ! | TCTCAAACCTTTGTTTATCC+AGG | - | chr8_2:42024370-42024389 | Msa1248300:CDS | 35.0% |
| TTGCAAAGAACTACATTAGG+TGG | + | chr8_2:42024509-42024528 | None:intergenic | 35.0% | |
| TAGTTCTTTGCAACTACGAA+GGG | - | chr8_2:42024516-42024535 | Msa1248300:CDS | 35.0% | |
| TGAGGCTGCTGAAATCTATA+CGG | - | chr8_2:42022462-42022481 | Msa1248300:CDS | 40.0% | |
| TGTGGAGGAAAAAGAAGTGA+AGG | - | chr8_2:42022537-42022556 | Msa1248300:CDS | 40.0% | |
| GTGGAGGAAAAAGAAGTGAA+GGG | - | chr8_2:42022538-42022557 | Msa1248300:CDS | 40.0% | |
| ! | AGTGCTTGCAGAACATTTTC+TGG | + | chr8_2:42022820-42022839 | None:intergenic | 40.0% |
| TGGCTATCATGCTGAGATAT+GGG | + | chr8_2:42022858-42022877 | None:intergenic | 40.0% | |
| TTGGCTATCATGCTGAGATA+TGG | + | chr8_2:42022859-42022878 | None:intergenic | 40.0% | |
| GCATGATAGCCAAAAAAACG+CGG | - | chr8_2:42022866-42022885 | Msa1248300:CDS | 40.0% | |
| CATGATAGCCAAAAAAACGC+GGG | - | chr8_2:42022867-42022886 | Msa1248300:CDS | 40.0% | |
| CAAAGGGAGGAAAATCAAAG+TGG | - | chr8_2:42022898-42022917 | Msa1248300:CDS | 40.0% | |
| ! | ATCCTTCTGCCATGTCTTTT+TGG | + | chr8_2:42022980-42022999 | None:intergenic | 40.0% |
| TCATGCTAGCCAAAAAAACG+TGG | - | chr8_2:42023171-42023190 | Msa1248300:CDS | 40.0% | |
| CATGCTAGCCAAAAAAACGT+GGG | - | chr8_2:42023172-42023191 | Msa1248300:CDS | 40.0% | |
| !!! | ATCCTTCTCCCACGTTTTTT+TGG | + | chr8_2:42023183-42023202 | None:intergenic | 40.0% |
| ! | ATCCTTCTACCACGTCTTTT+TGG | + | chr8_2:42023285-42023304 | None:intergenic | 40.0% |
| AGACGTGGTAGAAGGATTAA+AGG | - | chr8_2:42023288-42023307 | Msa1248300:CDS | 40.0% | |
| GACGTGGTAGAAGGATTAAA+GGG | - | chr8_2:42023289-42023308 | Msa1248300:CDS | 40.0% | |
| AAAGGGATGTAGTTAAAGCG+AGG | - | chr8_2:42023306-42023325 | Msa1248300:CDS | 40.0% | |
| TAGTTAAAGCGAGGTTGTCA+AGG | - | chr8_2:42023315-42023334 | Msa1248300:intron | 40.0% | |
| TGGCAGGATAAGAACATAGA+CGG | - | chr8_2:42023454-42023473 | Msa1248300:CDS | 40.0% | |
| ! | AAGCCAAAGAAGCACAGAAA+AGG | - | chr8_2:42023503-42023522 | Msa1248300:CDS | 40.0% |
| !! | GAAAGTACCCACTGTTCAAT+TGG | + | chr8_2:42023807-42023826 | None:intergenic | 40.0% |
| ATTGAACAGTGGGTACTTTC+TGG | - | chr8_2:42023807-42023826 | Msa1248300:CDS | 40.0% | |
| GGAAAGAGAACTACTGGAAA+TGG | - | chr8_2:42023831-42023850 | Msa1248300:CDS | 40.0% | |
| GTCCATAACGTCAACTACAA+AGG | - | chr8_2:42023912-42023931 | Msa1248300:intron | 40.0% | |
| TCCCTTTGTAGTTGACGTTA+TGG | + | chr8_2:42023917-42023936 | None:intergenic | 40.0% | |
| TAGATTCCAGCGTCAGAAAA+AGG | - | chr8_2:42023965-42023984 | Msa1248300:intron | 40.0% | |
| CTAAGCGTATCGAAGATAGT+TGG | + | chr8_2:42024053-42024072 | None:intergenic | 40.0% | |
| CCTTTCTTCACAACTGAAAG+GGG | + | chr8_2:42024104-42024123 | None:intergenic | 40.0% | |
| GACCTTTCTTCACAACTGAA+AGG | + | chr8_2:42024106-42024125 | None:intergenic | 40.0% | |
| !! | ATTGAGGCTAGCTTCAGAAT+CGG | + | chr8_2:42024165-42024184 | None:intergenic | 40.0% |
| ATCAGAAGTTACGGAAGATG+AGG | - | chr8_2:42024229-42024248 | Msa1248300:intron | 40.0% | |
| TCACATAATAGCACTTTGGC+TGG | + | chr8_2:42024283-42024302 | None:intergenic | 40.0% | |
| TGTTGGAATAAACAAGGTGC+TGG | - | chr8_2:42024406-42024425 | Msa1248300:CDS | 40.0% | |
| !! | ATAAACAAGGTGCTGGTTGA+TGG | - | chr8_2:42024413-42024432 | Msa1248300:CDS | 40.0% |
| GTAGTTCTTTGCAACTACGA+AGG | - | chr8_2:42024515-42024534 | Msa1248300:CDS | 40.0% | |
| GGGAAATCTGGAAATTCCTT+TGG | - | chr8_2:42024536-42024555 | Msa1248300:CDS | 40.0% | |
| AGTTGACCTGGTGATAGAAA+AGG | - | chr8_2:42024568-42024587 | Msa1248300:CDS | 40.0% | |
| ! | GAAAAGGCCGACTTTATTCT+TGG | - | chr8_2:42024584-42024603 | Msa1248300:CDS | 40.0% |
| TCCACTGCCAAGAATAAAGT+CGG | + | chr8_2:42024594-42024613 | None:intergenic | 40.0% | |
| ATTCTTGGCAGTGGAATCAA+AGG | - | chr8_2:42024599-42024618 | Msa1248300:CDS | 40.0% | |
| TGAGGCTGCTGAAATCTATA+CGG | - | chr8_2:42022462-42022481 | Msa1248300:CDS | 40.0% | |
| TGTGGAGGAAAAAGAAGTGA+AGG | - | chr8_2:42022537-42022556 | Msa1248300:CDS | 40.0% | |
| GTGGAGGAAAAAGAAGTGAA+GGG | - | chr8_2:42022538-42022557 | Msa1248300:CDS | 40.0% | |
| ! | AGTGCTTGCAGAACATTTTC+TGG | + | chr8_2:42022820-42022839 | None:intergenic | 40.0% |
| TGGCTATCATGCTGAGATAT+GGG | + | chr8_2:42022858-42022877 | None:intergenic | 40.0% | |
| TTGGCTATCATGCTGAGATA+TGG | + | chr8_2:42022859-42022878 | None:intergenic | 40.0% | |
| GCATGATAGCCAAAAAAACG+CGG | - | chr8_2:42022866-42022885 | Msa1248300:CDS | 40.0% | |
| CATGATAGCCAAAAAAACGC+GGG | - | chr8_2:42022867-42022886 | Msa1248300:CDS | 40.0% | |
| CAAAGGGAGGAAAATCAAAG+TGG | - | chr8_2:42022898-42022917 | Msa1248300:CDS | 40.0% | |
| ! | ATCCTTCTGCCATGTCTTTT+TGG | + | chr8_2:42022980-42022999 | None:intergenic | 40.0% |
| TCATGCTAGCCAAAAAAACG+TGG | - | chr8_2:42023171-42023190 | Msa1248300:CDS | 40.0% | |
| CATGCTAGCCAAAAAAACGT+GGG | - | chr8_2:42023172-42023191 | Msa1248300:CDS | 40.0% | |
| !!! | ATCCTTCTCCCACGTTTTTT+TGG | + | chr8_2:42023183-42023202 | None:intergenic | 40.0% |
| ! | ATCCTTCTACCACGTCTTTT+TGG | + | chr8_2:42023285-42023304 | None:intergenic | 40.0% |
| AGACGTGGTAGAAGGATTAA+AGG | - | chr8_2:42023288-42023307 | Msa1248300:CDS | 40.0% | |
| GACGTGGTAGAAGGATTAAA+GGG | - | chr8_2:42023289-42023308 | Msa1248300:CDS | 40.0% | |
| AAAGGGATGTAGTTAAAGCG+AGG | - | chr8_2:42023306-42023325 | Msa1248300:CDS | 40.0% | |
| TAGTTAAAGCGAGGTTGTCA+AGG | - | chr8_2:42023315-42023334 | Msa1248300:intron | 40.0% | |
| TGGCAGGATAAGAACATAGA+CGG | - | chr8_2:42023454-42023473 | Msa1248300:CDS | 40.0% | |
| ! | AAGCCAAAGAAGCACAGAAA+AGG | - | chr8_2:42023503-42023522 | Msa1248300:CDS | 40.0% |
| !! | GAAAGTACCCACTGTTCAAT+TGG | + | chr8_2:42023807-42023826 | None:intergenic | 40.0% |
| ATTGAACAGTGGGTACTTTC+TGG | - | chr8_2:42023807-42023826 | Msa1248300:CDS | 40.0% | |
| GGAAAGAGAACTACTGGAAA+TGG | - | chr8_2:42023831-42023850 | Msa1248300:CDS | 40.0% | |
| GTCCATAACGTCAACTACAA+AGG | - | chr8_2:42023912-42023931 | Msa1248300:intron | 40.0% | |
| TCCCTTTGTAGTTGACGTTA+TGG | + | chr8_2:42023917-42023936 | None:intergenic | 40.0% | |
| TAGATTCCAGCGTCAGAAAA+AGG | - | chr8_2:42023965-42023984 | Msa1248300:intron | 40.0% | |
| CTAAGCGTATCGAAGATAGT+TGG | + | chr8_2:42024053-42024072 | None:intergenic | 40.0% | |
| CCTTTCTTCACAACTGAAAG+GGG | + | chr8_2:42024104-42024123 | None:intergenic | 40.0% | |
| GACCTTTCTTCACAACTGAA+AGG | + | chr8_2:42024106-42024125 | None:intergenic | 40.0% | |
| !! | ATTGAGGCTAGCTTCAGAAT+CGG | + | chr8_2:42024165-42024184 | None:intergenic | 40.0% |
| ATCAGAAGTTACGGAAGATG+AGG | - | chr8_2:42024229-42024248 | Msa1248300:intron | 40.0% | |
| TCACATAATAGCACTTTGGC+TGG | + | chr8_2:42024283-42024302 | None:intergenic | 40.0% | |
| TGTTGGAATAAACAAGGTGC+TGG | - | chr8_2:42024406-42024425 | Msa1248300:CDS | 40.0% | |
| !! | ATAAACAAGGTGCTGGTTGA+TGG | - | chr8_2:42024413-42024432 | Msa1248300:CDS | 40.0% |
| GTAGTTCTTTGCAACTACGA+AGG | - | chr8_2:42024515-42024534 | Msa1248300:CDS | 40.0% | |
| GGGAAATCTGGAAATTCCTT+TGG | - | chr8_2:42024536-42024555 | Msa1248300:CDS | 40.0% | |
| AGTTGACCTGGTGATAGAAA+AGG | - | chr8_2:42024568-42024587 | Msa1248300:CDS | 40.0% | |
| ! | GAAAAGGCCGACTTTATTCT+TGG | - | chr8_2:42024584-42024603 | Msa1248300:CDS | 40.0% |
| TCCACTGCCAAGAATAAAGT+CGG | + | chr8_2:42024594-42024613 | None:intergenic | 40.0% | |
| ATTCTTGGCAGTGGAATCAA+AGG | - | chr8_2:42024599-42024618 | Msa1248300:CDS | 40.0% | |
| TCTGCATTGTCTTGAACGTG+AGG | - | chr8_2:42022444-42022463 | Msa1248300:CDS | 45.0% | |
| !! | GAAAGGTGTTGCAATGAGTG+TGG | - | chr8_2:42022519-42022538 | Msa1248300:CDS | 45.0% |
| !!! | ATCCTTCTCCCGCGTTTTTT+TGG | + | chr8_2:42022878-42022897 | None:intergenic | 45.0% |
| AGCCAAAAAGACATGGCAGA+AGG | - | chr8_2:42022975-42022994 | Msa1248300:CDS | 45.0% | |
| ATGGCAGAAGGATCAAAGAG+AGG | - | chr8_2:42022987-42023006 | Msa1248300:CDS | 45.0% | |
| ! | ATCCTTTTCCCACGTCTTTC+TGG | + | chr8_2:42023081-42023100 | None:intergenic | 45.0% |
| TTGGCTAGCATGATGAGACA+TGG | + | chr8_2:42023164-42023183 | None:intergenic | 45.0% | |
| AGCCAAAAAAACGTGGGAGA+AGG | - | chr8_2:42023178-42023197 | Msa1248300:intron | 45.0% | |
| TGCCAAAAAGACGTGGTAGA+AGG | - | chr8_2:42023280-42023299 | Msa1248300:intron | 45.0% | |
| !! | TGTGCTTCTTTGGCTTGTTC+AGG | + | chr8_2:42023499-42023518 | None:intergenic | 45.0% |
| GAAAAGAAGAACGTGTGGTG+AGG | - | chr8_2:42023525-42023544 | Msa1248300:intron | 45.0% | |
| ! | TAGGGCATCAAGGAGACTAA+TGG | - | chr8_2:42023555-42023574 | Msa1248300:intron | 45.0% |
| TCCCAGTCCAATTGAACAGT+GGG | - | chr8_2:42023797-42023816 | Msa1248300:CDS | 45.0% | |
| ACCCACTGTTCAATTGGACT+GGG | + | chr8_2:42023801-42023820 | None:intergenic | 45.0% | |
| TACCCACTGTTCAATTGGAC+TGG | + | chr8_2:42023802-42023821 | None:intergenic | 45.0% | |
| TCTGGTGGAAAGAGAACTAC+TGG | - | chr8_2:42023825-42023844 | Msa1248300:CDS | 45.0% | |
| TTCTTCACAACTGAAAGGGG+AGG | + | chr8_2:42024101-42024120 | None:intergenic | 45.0% | |
| CCCCTTTCAGTTGTGAAGAA+AGG | - | chr8_2:42024101-42024120 | Msa1248300:intron | 45.0% | |
| GGATGTTGCATGTGATGATC+AGG | + | chr8_2:42024350-42024369 | None:intergenic | 45.0% | |
| TGCAACTACGAAGGGAAATC+TGG | - | chr8_2:42024524-42024543 | Msa1248300:CDS | 45.0% | |
| GTCAACTTCAACAGCACCAA+AGG | + | chr8_2:42024555-42024574 | None:intergenic | 45.0% | |
| TCTGCATTGTCTTGAACGTG+AGG | - | chr8_2:42022444-42022463 | Msa1248300:CDS | 45.0% | |
| !! | GAAAGGTGTTGCAATGAGTG+TGG | - | chr8_2:42022519-42022538 | Msa1248300:CDS | 45.0% |
| !!! | ATCCTTCTCCCGCGTTTTTT+TGG | + | chr8_2:42022878-42022897 | None:intergenic | 45.0% |
| AGCCAAAAAGACATGGCAGA+AGG | - | chr8_2:42022975-42022994 | Msa1248300:CDS | 45.0% | |
| ATGGCAGAAGGATCAAAGAG+AGG | - | chr8_2:42022987-42023006 | Msa1248300:CDS | 45.0% | |
| ! | ATCCTTTTCCCACGTCTTTC+TGG | + | chr8_2:42023081-42023100 | None:intergenic | 45.0% |
| TTGGCTAGCATGATGAGACA+TGG | + | chr8_2:42023164-42023183 | None:intergenic | 45.0% | |
| AGCCAAAAAAACGTGGGAGA+AGG | - | chr8_2:42023178-42023197 | Msa1248300:intron | 45.0% | |
| TGCCAAAAAGACGTGGTAGA+AGG | - | chr8_2:42023280-42023299 | Msa1248300:intron | 45.0% | |
| !! | TGTGCTTCTTTGGCTTGTTC+AGG | + | chr8_2:42023499-42023518 | None:intergenic | 45.0% |
| GAAAAGAAGAACGTGTGGTG+AGG | - | chr8_2:42023525-42023544 | Msa1248300:intron | 45.0% | |
| ! | TAGGGCATCAAGGAGACTAA+TGG | - | chr8_2:42023555-42023574 | Msa1248300:intron | 45.0% |
| TCCCAGTCCAATTGAACAGT+GGG | - | chr8_2:42023797-42023816 | Msa1248300:CDS | 45.0% | |
| ACCCACTGTTCAATTGGACT+GGG | + | chr8_2:42023801-42023820 | None:intergenic | 45.0% | |
| TACCCACTGTTCAATTGGAC+TGG | + | chr8_2:42023802-42023821 | None:intergenic | 45.0% | |
| TCTGGTGGAAAGAGAACTAC+TGG | - | chr8_2:42023825-42023844 | Msa1248300:CDS | 45.0% | |
| TTCTTCACAACTGAAAGGGG+AGG | + | chr8_2:42024101-42024120 | None:intergenic | 45.0% | |
| CCCCTTTCAGTTGTGAAGAA+AGG | - | chr8_2:42024101-42024120 | Msa1248300:intron | 45.0% | |
| GGATGTTGCATGTGATGATC+AGG | + | chr8_2:42024350-42024369 | None:intergenic | 45.0% | |
| TGCAACTACGAAGGGAAATC+TGG | - | chr8_2:42024524-42024543 | Msa1248300:CDS | 45.0% | |
| GTCAACTTCAACAGCACCAA+AGG | + | chr8_2:42024555-42024574 | None:intergenic | 45.0% | |
| CAGCACAGGGGATGAAAACT+TGG | + | chr8_2:42022416-42022435 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr8_2:42022428-42022447 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr8_2:42022429-42022448 | None:intergenic | 50.0% | |
| TGCAGATGAGTTGTCAGCAC+AGG | + | chr8_2:42022430-42022449 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCAATGAGTGTGG+AGG | - | chr8_2:42022522-42022541 | Msa1248300:CDS | 50.0% |
| AGCCAAAAAAACGCGGGAGA+AGG | - | chr8_2:42022873-42022892 | Msa1248300:CDS | 50.0% | |
| AAACGCGGGAGAAGGATCAA+AGG | - | chr8_2:42022881-42022900 | Msa1248300:CDS | 50.0% | |
| AACGCGGGAGAAGGATCAAA+GGG | - | chr8_2:42022882-42022901 | Msa1248300:CDS | 50.0% | |
| TGGCTAGCAGGCTGAGATTT+GGG | + | chr8_2:42022960-42022979 | None:intergenic | 50.0% | |
| TTGGCTAGCAGGCTGAGATT+TGG | + | chr8_2:42022961-42022980 | None:intergenic | 50.0% | |
| GCCTGCTAGCCAAAAAGACA+TGG | - | chr8_2:42022968-42022987 | Msa1248300:CDS | 50.0% | |
| !!! | GCCATGTCTTTTTGGCTAGC+AGG | + | chr8_2:42022972-42022991 | None:intergenic | 50.0% |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr8_2:42023061-42023080 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | - | chr8_2:42023070-42023089 | Msa1248300:intron | 50.0% | |
| AGCCAGAAAGACGTGGGAAA+AGG | - | chr8_2:42023076-42023095 | Msa1248300:intron | 50.0% | |
| GAGTGCTTGCCAAAAAGACG+TGG | - | chr8_2:42023273-42023292 | Msa1248300:intron | 50.0% | |
| GGATAAGAACATAGACGGCG+AGG | - | chr8_2:42023459-42023478 | Msa1248300:CDS | 50.0% | |
| AGTCTCCTTGATGCCCTAAC+AGG | + | chr8_2:42023553-42023572 | None:intergenic | 50.0% | |
| GTCCCAGTCCAATTGAACAG+TGG | - | chr8_2:42023796-42023815 | Msa1248300:CDS | 50.0% | |
| GAACAGTGGGTACTTTCTGG+TGG | - | chr8_2:42023810-42023829 | Msa1248300:CDS | 50.0% | |
| !! | AACAAGGTGCTGGTTGATGG+AGG | - | chr8_2:42024416-42024435 | Msa1248300:CDS | 50.0% |
| !! | TGGTGCTGTTGAAGTTGACC+TGG | - | chr8_2:42024556-42024575 | Msa1248300:CDS | 50.0% |
| ! | AGTCGGCCTTTTCTATCACC+AGG | + | chr8_2:42024577-42024596 | None:intergenic | 50.0% |
| ! | GCCGACTTTATTCTTGGCAG+TGG | - | chr8_2:42024590-42024609 | Msa1248300:CDS | 50.0% |
| CAGCACAGGGGATGAAAACT+TGG | + | chr8_2:42022416-42022435 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr8_2:42022428-42022447 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr8_2:42022429-42022448 | None:intergenic | 50.0% | |
| TGCAGATGAGTTGTCAGCAC+AGG | + | chr8_2:42022430-42022449 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCAATGAGTGTGG+AGG | - | chr8_2:42022522-42022541 | Msa1248300:CDS | 50.0% |
| AGCCAAAAAAACGCGGGAGA+AGG | - | chr8_2:42022873-42022892 | Msa1248300:CDS | 50.0% | |
| AAACGCGGGAGAAGGATCAA+AGG | - | chr8_2:42022881-42022900 | Msa1248300:CDS | 50.0% | |
| AACGCGGGAGAAGGATCAAA+GGG | - | chr8_2:42022882-42022901 | Msa1248300:CDS | 50.0% | |
| TGGCTAGCAGGCTGAGATTT+GGG | + | chr8_2:42022960-42022979 | None:intergenic | 50.0% | |
| TTGGCTAGCAGGCTGAGATT+TGG | + | chr8_2:42022961-42022980 | None:intergenic | 50.0% | |
| GCCTGCTAGCCAAAAAGACA+TGG | - | chr8_2:42022968-42022987 | Msa1248300:CDS | 50.0% | |
| !!! | GCCATGTCTTTTTGGCTAGC+AGG | + | chr8_2:42022972-42022991 | None:intergenic | 50.0% |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr8_2:42023061-42023080 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | - | chr8_2:42023070-42023089 | Msa1248300:intron | 50.0% | |
| AGCCAGAAAGACGTGGGAAA+AGG | - | chr8_2:42023076-42023095 | Msa1248300:intron | 50.0% | |
| GAGTGCTTGCCAAAAAGACG+TGG | - | chr8_2:42023273-42023292 | Msa1248300:intron | 50.0% | |
| GGATAAGAACATAGACGGCG+AGG | - | chr8_2:42023459-42023478 | Msa1248300:CDS | 50.0% | |
| AGTCTCCTTGATGCCCTAAC+AGG | + | chr8_2:42023553-42023572 | None:intergenic | 50.0% | |
| GTCCCAGTCCAATTGAACAG+TGG | - | chr8_2:42023796-42023815 | Msa1248300:CDS | 50.0% | |
| GAACAGTGGGTACTTTCTGG+TGG | - | chr8_2:42023810-42023829 | Msa1248300:CDS | 50.0% | |
| !! | AACAAGGTGCTGGTTGATGG+AGG | - | chr8_2:42024416-42024435 | Msa1248300:CDS | 50.0% |
| !! | TGGTGCTGTTGAAGTTGACC+TGG | - | chr8_2:42024556-42024575 | Msa1248300:CDS | 50.0% |
| ! | AGTCGGCCTTTTCTATCACC+AGG | + | chr8_2:42024577-42024596 | None:intergenic | 50.0% |
| ! | GCCGACTTTATTCTTGGCAG+TGG | - | chr8_2:42024590-42024609 | Msa1248300:CDS | 50.0% |
| CTGGCTAGCATGCTGAGACA+TGG | + | chr8_2:42023062-42023081 | None:intergenic | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | - | chr8_2:42023069-42023088 | Msa1248300:intron | 55.0% | |
| ! | GTGTGGTGAGGCACCTGTTA+GGG | - | chr8_2:42023537-42023556 | Msa1248300:intron | 55.0% |
| ! | AGGCACCTGTTAGGGCATCA+AGG | - | chr8_2:42023545-42023564 | Msa1248300:intron | 55.0% |
| ! | CATCGGCCTTTTTCTGACGC+TGG | + | chr8_2:42023974-42023993 | None:intergenic | 55.0% |
| GGAAAGATGCTCTCAGTGGC+AGG | + | chr8_2:42024080-42024099 | None:intergenic | 55.0% | |
| GGGAGGAAAGATGCTCTCAG+TGG | + | chr8_2:42024084-42024103 | None:intergenic | 55.0% | |
| CTGGCTAGCATGCTGAGACA+TGG | + | chr8_2:42023062-42023081 | None:intergenic | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | - | chr8_2:42023069-42023088 | Msa1248300:intron | 55.0% | |
| ! | GTGTGGTGAGGCACCTGTTA+GGG | - | chr8_2:42023537-42023556 | Msa1248300:intron | 55.0% |
| ! | AGGCACCTGTTAGGGCATCA+AGG | - | chr8_2:42023545-42023564 | Msa1248300:intron | 55.0% |
| ! | CATCGGCCTTTTTCTGACGC+TGG | + | chr8_2:42023974-42023993 | None:intergenic | 55.0% |
| GGAAAGATGCTCTCAGTGGC+AGG | + | chr8_2:42024080-42024099 | None:intergenic | 55.0% | |
| GGGAGGAAAGATGCTCTCAG+TGG | + | chr8_2:42024084-42024103 | None:intergenic | 55.0% | |
| GCGGGAGAAGGATCAAAGGG+AGG | - | chr8_2:42022885-42022904 | Msa1248300:CDS | 60.0% | |
| ! | CGTGTGGTGAGGCACCTGTT+AGG | - | chr8_2:42023536-42023555 | Msa1248300:intron | 60.0% |
| GCGGGAGAAGGATCAAAGGG+AGG | - | chr8_2:42022885-42022904 | Msa1248300:CDS | 60.0% | |
| ! | CGTGTGGTGAGGCACCTGTT+AGG | - | chr8_2:42023536-42023555 | Msa1248300:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 42022370 | 42024625 | 42022370 | ID=Msa1248300;Name=Msa1248300 |
| chr8_2 | mRNA | 42022370 | 42024625 | 42022370 | ID=Msa1248300-mRNA-1;Parent=Msa1248300;Name=Msa1248300-mRNA-1;_AED=0.82;_eAED=0.82;_QI=0|0|0|0.16|1|1|6|0|488 |
| chr8_2 | exon | 42024320 | 42024625 | 42024320 | ID=Msa1248300-mRNA-1:exon:12798;Parent=Msa1248300-mRNA-1 |
| chr8_2 | exon | 42023701 | 42023925 | 42023701 | ID=Msa1248300-mRNA-1:exon:12797;Parent=Msa1248300-mRNA-1 |
| chr8_2 | exon | 42023410 | 42023535 | 42023410 | ID=Msa1248300-mRNA-1:exon:12796;Parent=Msa1248300-mRNA-1 |
| chr8_2 | exon | 42023281 | 42023327 | 42023281 | ID=Msa1248300-mRNA-1:exon:12795;Parent=Msa1248300-mRNA-1 |
| chr8_2 | exon | 42023088 | 42023192 | 42023088 | ID=Msa1248300-mRNA-1:exon:12794;Parent=Msa1248300-mRNA-1 |
| chr8_2 | exon | 42022370 | 42023027 | 42022370 | ID=Msa1248300-mRNA-1:exon:12793;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42024320 | 42024625 | 42024320 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42023701 | 42023925 | 42023701 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42023410 | 42023535 | 42023410 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42023281 | 42023327 | 42023281 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42023088 | 42023192 | 42023088 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| chr8_2 | CDS | 42022370 | 42023027 | 42022370 | ID=Msa1248300-mRNA-1:cds;Parent=Msa1248300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
