AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0912690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0912690 MtrunA17_Chr6g0466301 98.544 206 3 0 1 206 1 206 3.16e-154 425
Msa0912690 MtrunA17_Chr6g0465491 98.544 206 3 0 1 206 1 206 3.16e-154 425
Msa0912690 MtrunA17_Chr1g0201121 88.942 208 20 2 1 206 1 207 2.66e-137 382
Msa0912690 MtrunA17_Chr8g0383261 76.847 203 46 1 4 206 8 209 1.10e-117 333
Msa0912690 MtrunA17_Chr4g0004661 74.286 210 47 3 1 206 57 263 3.39e-113 323
Msa0912690 MtrunA17_Chr2g0331691 74.510 204 51 1 4 206 6 209 1.20e-112 320
Msa0912690 MtrunA17_Chr4g0034871 73.913 207 52 2 1 206 1 206 5.18e-111 316
Msa0912690 MtrunA17_Chr6g0466161 73.077 182 48 1 25 206 7 187 6.13e-94 273
Msa0912690 MtrunA17_Chr6g0465471 72.527 182 49 1 25 206 7 187 3.24e-93 271
Msa0912690 MtrunA17_Chr6g0466431 69.091 110 25 1 1 110 1 101 1.45e-51 161
Msa0912690 MtrunA17_Chr6g0465611 69.091 110 25 1 1 110 1 101 1.45e-51 161
Msa0912690 MtrunA17_Chr2g0327911 42.515 167 91 3 8 174 15 176 1.58e-39 134
Msa0912690 MtrunA17_Chr4g0040781 41.975 162 87 3 8 169 13 167 2.51e-39 134
Msa0912690 MtrunA17_Chr4g0046261 40.741 162 89 3 8 169 13 167 1.05e-38 132
Msa0912690 MtrunA17_Chr2g0276941 39.773 176 92 4 1 169 1 169 2.46e-38 132
Msa0912690 MtrunA17_Chr1g0174281 43.030 165 87 3 8 172 15 172 3.52e-38 131
Msa0912690 MtrunA17_Chr8g0390561 40.000 175 97 4 1 174 1 168 8.25e-38 129
Msa0912690 MtrunA17_Chr7g0214241 41.975 162 87 3 8 169 15 169 9.14e-38 130
Msa0912690 MtrunA17_Chr1g0182301 39.011 182 105 3 8 189 15 190 1.15e-37 130
Msa0912690 MtrunA17_Chr2g0283131 40.123 162 90 3 8 169 13 167 1.28e-37 130
Msa0912690 MtrunA17_Chr2g0325091 41.104 163 89 3 8 170 11 166 2.11e-37 129
Msa0912690 MtrunA17_Chr1g0182321 38.462 182 106 3 8 189 15 190 4.80e-37 128
Msa0912690 MtrunA17_Chr2g0276931 35.714 196 114 4 8 203 9 192 8.45e-37 127
Msa0912690 MtrunA17_Chr6g0458081 40.116 172 96 3 8 179 6 170 9.02e-37 127
Msa0912690 MtrunA17_Chr4g0030911 40.719 167 93 3 8 174 15 175 1.16e-36 127
Msa0912690 MtrunA17_Chr8g0351861 40.000 165 92 3 8 172 16 173 1.18e-36 127
Msa0912690 MtrunA17_Chr7g0263071 40.719 167 93 3 8 174 15 175 1.39e-36 127
Msa0912690 MtrunA17_Chr8g0381841 40.000 165 92 3 8 172 17 174 1.55e-36 127
Msa0912690 MtrunA17_Chr2g0315551 40.123 162 90 3 8 169 13 167 1.89e-36 127
Msa0912690 MtrunA17_Chr3g0112681 38.788 165 94 3 8 172 12 169 1.99e-36 127
Msa0912690 MtrunA17_Chr1g0212521 40.120 167 94 3 8 174 15 175 2.18e-36 126
Msa0912690 MtrunA17_Chr7g0231131 42.424 165 88 3 8 172 15 172 2.65e-36 126
Msa0912690 MtrunA17_Chr5g0400131 35.294 204 118 4 10 206 11 207 3.62e-36 125
Msa0912690 MtrunA17_Chr4g0032201 37.576 165 96 3 8 172 12 169 3.65e-36 126
Msa0912690 MtrunA17_Chr3g0123821 40.000 165 92 3 8 172 16 173 4.30e-36 126
Msa0912690 MtrunA17_Chr8g0382221 37.500 208 108 6 10 206 11 207 5.45e-36 125
Msa0912690 MtrunA17_Chr8g0335471 39.759 166 93 3 8 173 8 166 9.05e-36 124
Msa0912690 MtrunA17_Chr7g0234201 38.372 172 99 3 8 179 13 177 1.00e-35 125
Msa0912690 MtrunA17_Chr4g0055651 35.323 201 120 4 8 205 8 201 1.34e-35 124
Msa0912690 MtrunA17_Chr4g0055081 35.468 203 118 5 10 206 11 206 1.43e-35 124
Msa0912690 MtrunA17_Chr7g0250531 36.410 195 112 4 8 202 8 190 4.99e-35 122
Msa0912690 MtrunA17_Chr2g0290891 38.690 168 96 3 8 175 6 166 5.81e-35 122
Msa0912690 MtrunA17_Chr5g0433561 39.394 165 93 3 10 174 12 169 6.46e-35 122
Msa0912690 MtrunA17_Chr3g0109721 39.394 165 93 3 10 174 12 169 1.34e-34 121
Msa0912690 MtrunA17_Chr3g0123971 35.294 204 117 5 10 206 11 206 2.13e-34 121
Msa0912690 MtrunA17_Chr2g0319951 37.654 162 94 2 8 169 13 167 8.06e-34 120
Msa0912690 MtrunA17_Chr8g0349711 35.593 177 107 3 3 179 1 170 9.53e-34 119
Msa0912690 MtrunA17_Chr7g0275991 39.264 163 92 3 8 170 20 175 2.81e-33 119
Msa0912690 MtrunA17_Chr8g0392931 36.022 186 110 4 8 191 14 192 9.91e-33 117
Msa0912690 MtrunA17_Chr1g0189361 37.126 167 98 3 8 174 14 173 1.16e-32 117
Msa0912690 MtrunA17_Chr8g0349681 38.596 171 98 3 9 179 176 339 2.77e-32 122
Msa0912690 MtrunA17_Chr8g0349681 35.393 178 108 3 8 185 384 554 5.61e-29 113
Msa0912690 MtrunA17_Chr8g0349681 36.527 167 99 3 3 169 8 167 2.19e-28 111
Msa0912690 MtrunA17_Chr6g0482721 38.650 163 93 3 8 170 12 167 2.87e-32 116
Msa0912690 MtrunA17_Chr8g0346421 38.650 163 93 3 8 170 26 181 3.83e-32 116
Msa0912690 MtrunA17_Chr6g0465601 66.667 75 25 0 109 183 4 78 1.69e-31 110
Msa0912690 MtrunA17_Chr6g0466421 67.568 74 24 0 109 182 14 87 3.74e-31 109
Msa0912690 MtrunA17_Chr1g0199331 35.928 167 99 4 9 174 32 191 2.65e-28 105
Msa0912690 MtrunA17_Chr7g0265001 33.831 201 121 6 10 204 18 212 5.02e-27 102
Msa0912690 MtrunA17_Chr8g0384311 38.037 163 93 6 8 169 13 168 2.87e-26 100
Msa0912690 MtrunA17_Chr1g0180291 34.951 206 113 8 9 204 15 209 4.85e-26 99.8
Msa0912690 MtrunA17_Chr1g0159481 38.037 163 93 6 8 169 17 172 8.13e-26 99.4
Msa0912690 MtrunA17_Chr1g0197331 36.318 201 117 8 9 204 16 210 1.89e-25 98.2
Msa0912690 MtrunA17_Chr3g0130271 37.805 164 93 6 8 169 12 168 1.49e-24 95.9
Msa0912690 MtrunA17_Chr3g0138121 27.513 189 124 4 9 197 14 189 1.13e-23 94.0
Msa0912690 MtrunA17_Chr3g0138101 27.513 189 124 4 9 197 14 189 1.22e-23 94.0
Msa0912690 MtrunA17_Chr3g0138111 27.513 189 124 4 9 197 14 189 1.23e-23 94.0
Msa0912690 MtrunA17_Chr6g0486041 29.469 207 123 7 8 205 6 198 9.07e-21 85.9
Msa0912690 MtrunA17_Chr2g0325101 30.168 179 110 5 8 177 6 178 1.64e-18 79.7
Msa0912690 MtrunA17_Chr2g0326141 63.158 57 21 0 129 185 299 355 2.32e-17 79.0
Msa0912690 MtrunA17_Chr5g0405791 30.994 171 103 6 8 169 6 170 7.66e-17 75.5
Msa0912690 MtrunA17_Chr4g0037021 28.649 185 117 5 8 183 6 184 9.23e-17 75.1
Msa0912690 MtrunA17_Chr8g0371501 31.579 171 102 6 8 169 6 170 1.10e-16 74.7
Msa0912690 MtrunA17_Chr3g0117931 29.775 178 110 5 1 169 1 172 1.81e-15 72.0
Msa0912690 MtrunA17_Chr4g0046211 31.707 123 77 4 8 129 6 122 2.56e-14 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0912690 AT4G09720.1 82.039 206 37 0 1 206 1 206 8.58e-129 361
Msa0912690 AT1G22740.1 83.495 206 31 2 1 206 1 203 1.80e-126 355
Msa0912690 AT4G09720.4 80.095 211 37 1 1 206 1 211 2.63e-125 352
Msa0912690 AT4G09720.3 77.880 217 37 1 1 206 1 217 2.76e-125 353
Msa0912690 AT1G52280.1 73.301 206 55 0 1 206 1 206 5.39e-113 321
Msa0912690 AT3G16100.1 72.816 206 56 0 1 206 1 206 7.99e-113 321
Msa0912690 AT2G21880.1 72.642 212 49 3 2 206 3 212 4.47e-112 319
Msa0912690 AT3G18820.1 74.396 207 51 2 1 206 1 206 8.15e-111 315
Msa0912690 AT1G49300.2 71.014 207 58 2 1 206 1 206 3.41e-107 306
Msa0912690 AT1G49300.1 71.014 207 58 2 1 206 1 206 3.41e-107 306
Msa0912690 AT4G09720.6 79.532 171 35 0 36 206 2 172 1.21e-102 293
Msa0912690 AT4G09720.5 79.532 171 35 0 36 206 2 172 1.21e-102 293
Msa0912690 AT4G09720.2 79.532 171 35 0 36 206 2 172 1.21e-102 293
Msa0912690 AT2G21880.2 68.868 212 49 4 2 206 3 204 2.67e-102 294
Msa0912690 AT2G21880.4 70.899 189 46 3 25 206 1 187 1.05e-96 279
Msa0912690 AT2G21880.3 70.899 189 46 3 25 206 1 187 1.05e-96 279
Msa0912690 AT5G39620.1 56.931 202 86 1 6 206 3 204 4.12e-82 243
Msa0912690 AT3G12160.1 39.336 211 107 5 8 204 15 218 3.02e-40 137
Msa0912690 AT1G28550.1 41.975 162 87 3 8 169 13 167 8.44e-39 133
Msa0912690 AT3G15060.1 41.358 162 88 3 8 169 13 167 1.11e-38 133
Msa0912690 AT5G60860.1 40.741 162 89 3 8 169 13 167 1.32e-38 132
Msa0912690 AT1G09630.1 41.212 165 90 3 8 172 12 169 2.08e-38 132
Msa0912690 AT2G33870.1 40.123 162 90 3 8 169 13 167 2.73e-38 132
Msa0912690 AT5G47960.1 41.212 165 90 3 8 172 15 172 8.06e-38 130
Msa0912690 AT3G53610.2 36.683 199 117 4 8 205 15 205 1.74e-37 130
Msa0912690 AT3G53610.3 36.683 199 117 4 8 205 15 205 1.74e-37 130
Msa0912690 AT3G53610.1 36.683 199 117 4 8 205 15 205 1.74e-37 130
Msa0912690 AT5G59840.1 36.224 196 119 2 8 203 15 204 3.91e-37 129
Msa0912690 AT5G45750.1 40.123 162 90 3 8 169 13 167 5.06e-37 128
Msa0912690 AT2G44610.1 36.585 205 115 5 10 206 11 208 1.73e-36 127
Msa0912690 AT3G46060.2 35.897 195 119 3 8 202 15 203 4.18e-36 126
Msa0912690 AT3G46060.3 35.897 195 119 3 8 202 15 203 4.18e-36 126
Msa0912690 AT3G46060.1 35.897 195 119 3 8 202 15 203 4.18e-36 126
Msa0912690 AT3G11730.1 36.139 202 117 5 8 204 8 202 4.30e-36 125
Msa0912690 AT4G35860.1 37.791 172 100 3 8 179 6 170 8.20e-36 125
Msa0912690 AT2G43130.1 37.791 172 100 3 8 179 12 176 1.01e-35 125
Msa0912690 AT5G59150.1 36.970 165 97 3 8 172 12 169 1.17e-35 125
Msa0912690 AT4G17530.1 35.323 201 120 4 8 205 8 201 1.85e-35 124
Msa0912690 AT5G47200.1 35.323 201 120 4 8 205 8 201 2.29e-35 124
Msa0912690 AT1G05810.1 39.157 166 94 3 4 169 8 166 2.74e-35 124
Msa0912690 AT5G10260.1 36.058 208 111 6 10 206 11 207 3.02e-35 124
Msa0912690 AT1G07410.1 36.970 165 97 3 8 172 12 169 3.16e-35 124
Msa0912690 AT4G18800.1 38.272 162 93 3 8 169 13 167 5.29e-35 123
Msa0912690 AT5G65270.1 40.000 165 92 3 8 172 17 174 5.58e-35 124
Msa0912690 AT1G05810.2 39.157 166 94 3 4 169 54 212 6.02e-35 124
Msa0912690 AT1G16920.1 38.889 162 92 2 8 169 13 167 6.27e-35 123
Msa0912690 AT4G17170.1 38.690 168 96 3 8 175 6 166 8.19e-35 122
Msa0912690 AT2G31680.1 36.047 172 103 3 8 179 12 176 1.06e-34 122
Msa0912690 AT4G18430.1 35.152 165 100 3 8 172 13 170 1.19e-34 122
Msa0912690 AT3G09900.1 39.560 182 104 2 8 189 15 190 1.76e-34 122
Msa0912690 AT5G03520.1 39.560 182 104 3 8 189 15 190 2.45e-34 121
Msa0912690 AT4G17160.1 36.408 206 112 7 9 204 7 203 2.49e-34 121
Msa0912690 AT1G73640.1 37.576 165 96 3 8 172 13 170 3.05e-34 122
Msa0912690 AT1G18200.1 36.970 165 97 3 8 172 13 170 4.06e-34 121
Msa0912690 AT4G39990.1 38.889 162 92 3 8 169 17 171 5.74e-34 121
Msa0912690 AT4G39890.1 38.323 167 93 3 9 173 10 168 5.87e-34 120
Msa0912690 AT5G64990.1 35.885 209 111 5 10 206 9 206 6.03e-34 120
Msa0912690 AT3G46830.1 36.364 165 98 3 8 172 12 169 6.27e-34 120
Msa0912690 AT3G46830.2 36.364 165 98 3 8 172 12 169 6.27e-34 120
Msa0912690 AT1G02130.1 36.905 168 99 3 8 175 8 168 1.04e-33 119
Msa0912690 AT1G01200.1 39.877 163 92 3 8 170 28 184 3.75e-33 119
Msa0912690 AT2G22290.1 35.714 210 109 7 10 206 11 207 4.93e-33 118
Msa0912690 AT5G45130.1 39.394 165 93 3 10 174 12 169 1.15e-32 117
Msa0912690 AT1G06400.1 36.420 162 96 3 8 169 13 167 3.27e-32 116
Msa0912690 AT3G07410.1 36.047 172 103 3 8 179 12 176 4.20e-32 116
Msa0912690 AT4G19640.1 38.182 165 95 3 10 174 12 169 4.50e-32 115
Msa0912690 AT5G45130.2 39.264 163 92 3 12 174 22 177 1.72e-31 114
Msa0912690 AT5G64990.2 34.722 216 111 6 10 206 9 213 2.81e-31 114
Msa0912690 AT5G47520.1 38.323 167 96 4 8 174 14 173 3.08e-31 114
Msa0912690 AT3G54840.2 36.585 164 96 4 9 171 34 190 7.76e-29 107
Msa0912690 AT3G54840.1 36.527 167 98 4 9 174 34 193 1.35e-28 106
Msa0912690 AT3G54840.3 36.364 165 97 4 11 174 2 159 4.58e-28 104
Msa0912690 AT4G19640.2 40.833 120 67 1 10 129 12 127 1.30e-27 102
Msa0912690 AT1G43890.3 39.877 163 90 6 8 169 13 168 4.65e-27 102
Msa0912690 AT1G43890.1 39.877 163 90 6 8 169 13 168 4.65e-27 102
Msa0912690 AT1G43890.2 39.877 163 90 6 8 169 13 168 4.65e-27 102
Msa0912690 AT4G19640.3 40.833 120 67 1 10 129 12 127 8.02e-27 101
Msa0912690 AT5G03520.2 39.726 146 82 3 44 189 41 180 2.22e-26 100
Msa0912690 AT5G03530.2 38.415 164 89 6 9 169 14 168 1.33e-25 99.0
Msa0912690 AT5G03530.1 38.415 164 89 6 9 169 14 168 1.33e-25 99.0
Msa0912690 AT5G20010.1 28.042 189 123 4 9 197 14 189 1.25e-24 96.7
Msa0912690 AT5G20020.1 28.042 189 123 4 9 197 14 189 1.61e-24 96.7
Msa0912690 AT5G55190.1 27.513 189 124 4 9 197 14 189 1.85e-23 93.6
Msa0912690 AT4G35860.2 36.923 130 75 3 50 179 2 124 2.86e-23 91.7
Msa0912690 AT4G28950.1 30.732 205 122 7 8 205 6 197 4.42e-23 92.4
Msa0912690 AT5G55080.1 27.711 166 110 3 9 174 14 169 1.21e-22 91.7
Msa0912690 AT5G59150.2 34.959 123 73 3 50 172 3 118 5.33e-20 83.2
Msa0912690 AT3G09910.5 33.161 193 117 8 9 200 14 195 1.56e-19 82.8
Msa0912690 AT3G09910.4 33.161 193 117 8 9 200 14 195 1.56e-19 82.8
Msa0912690 AT3G09910.3 35.185 162 97 6 9 169 14 168 1.69e-19 82.8
Msa0912690 AT3G09910.1 35.185 162 97 6 9 169 14 168 1.69e-19 82.8
Msa0912690 AT3G09910.2 35.185 162 97 6 9 169 14 168 1.69e-19 82.8
Msa0912690 AT5G45970.1 29.213 178 113 4 8 177 6 178 1.24e-18 80.5
Msa0912690 AT2G44690.1 30.409 171 104 5 8 169 18 182 1.02e-17 78.2
Msa0912690 AT1G20090.1 30.168 179 110 5 8 177 5 177 2.83e-17 76.6
Msa0912690 AT1G75840.1 30.168 179 110 5 8 177 6 178 5.17e-17 76.3
Msa0912690 AT4G35020.1 30.168 179 110 5 8 177 6 178 8.39e-17 75.5
Msa0912690 AT4G35020.2 30.168 179 110 5 8 177 6 178 8.39e-17 75.5
Msa0912690 AT4G35020.3 30.168 179 110 5 8 177 6 178 8.39e-17 75.5
Msa0912690 AT3G51300.1 30.409 171 104 5 8 169 6 170 1.76e-16 74.7
Msa0912690 AT3G48040.1 30.337 178 109 5 1 169 1 172 5.39e-16 73.6
Msa0912690 AT5G62880.1 30.337 178 109 5 1 169 1 172 7.24e-16 73.6
Msa0912690 AT2G17800.2 29.825 171 105 5 8 169 6 170 9.23e-16 72.8
Msa0912690 AT2G17800.1 29.825 171 105 5 8 169 6 170 9.23e-16 72.8
Msa0912690 AT4G35950.1 29.825 171 105 5 8 169 6 170 1.31e-15 72.4
Msa0912690 AT5G62880.2 29.670 182 113 5 1 173 1 176 1.76e-15 72.0
Msa0912690 AT3G48040.2 28.804 184 112 7 1 174 1 175 7.38e-14 67.4
Msa0912690 AT4G35020.4 32.231 121 75 4 8 127 6 120 1.21e-12 63.2
Msa0912690 AT4G35020.5 32.231 121 75 4 8 127 6 120 1.21e-12 63.2

Find 68 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCAAAGTTATCGTTCT+TGG 0.212272 6_2:+22113295 Msa0912690:CDS
TGTAGGAATGAATATTAAAT+TGG 0.217073 6_2:+22119440 Msa0912690:three_prime_UTR
TTGTTTCCAAGCAATATAAA+TGG 0.243659 6_2:-22117406 None:intergenic
GGAAAAGTGCTTGGATTAGA+AGG 0.279843 6_2:-22117385 None:intergenic
CTTTAGAATGTTGCATTTGT+AGG 0.281090 6_2:+22119423 Msa0912690:three_prime_UTR
TTGAAGAATTTGACGGGTAT+TGG 0.287274 6_2:-22119282 None:intergenic
TTTACATCAGGATACTGTTT+TGG 0.314586 6_2:+22119494 Msa0912690:three_prime_UTR
TGAATGTTAGAAAAGGAAAA+AGG 0.317620 6_2:-22113091 None:intergenic
CATGTCTTGCTCACGTTCAT+TGG 0.341105 6_2:-22117654 None:intergenic
GATTTATATAGTTGGGGAAA+TGG 0.347102 6_2:-22113151 None:intergenic
CATTTGATACACTTGATAAC+TGG 0.350734 6_2:+22115386 Msa0912690:CDS
TGCTCATTCTCTGGAACAAC+AGG 0.356385 6_2:-22119224 None:intergenic
GTCATCGATCTGCAATTCTT+TGG 0.364093 6_2:-22115128 None:intergenic
CGGGTATTGGAGAGAAATTC+CGG 0.375823 6_2:-22119269 None:intergenic
TTCATTGGCTAATGCGGTCT+TGG 0.384901 6_2:-22117639 None:intergenic
CCACCCCTCTGCTCATTCTC+TGG 0.385786 6_2:-22119233 None:intergenic
TTGGCAGTGATAGCAAAATT+AGG 0.386222 6_2:+22119707 Msa0912690:three_prime_UTR
GGAAACAAAGTTGATATTGA+TGG 0.397484 6_2:+22117421 Msa0912690:CDS
CTTCTGCGTAAGGCCATGTT+TGG 0.397975 6_2:-22113268 None:intergenic
GCACGAGGAGTTTCTGAAAC+AGG 0.403015 6_2:+22115408 Msa0912690:CDS
TTTGCAGATGTCTCAAAGTA+AGG 0.412467 6_2:-22117578 None:intergenic
GGAACAACAGGCTCCGGAAT+AGG 0.412607 6_2:-22119212 None:intergenic
GCGTAAGGCCATGTTTGGTT+CGG 0.422003 6_2:-22113263 None:intergenic
AGAGAGATGAATGTTAGAAA+AGG 0.435118 6_2:-22113098 None:intergenic
TCGGATAATCGATTAATTTG+TGG 0.438865 6_2:-22113244 None:intergenic
TTCTCTGGAACAACAGGCTC+CGG 0.445505 6_2:-22119218 None:intergenic
CAGCAATATAAAGCTACAAT+TGG 0.445543 6_2:+22115091 Msa0912690:CDS
AAGGAGTGGTGTGCCTCAAA+AGG 0.461942 6_2:+22117548 Msa0912690:CDS
CAGGAGAGATTTCAAAGTCT+TGG 0.477942 6_2:+22115301 Msa0912690:CDS
GAAAAGTGCTTGGATTAGAA+GGG 0.482693 6_2:-22117384 None:intergenic
GAGTAAAGTTCTTCTGCGTA+AGG 0.495389 6_2:-22113278 None:intergenic
AAACTAGAGATCGTTATAGT+TGG 0.495881 6_2:+22119688 Msa0912690:three_prime_UTR
AAAAGAATTGAAGAATTTGA+CGG 0.500221 6_2:-22119289 None:intergenic
GATATGGGACACTGCAGGGC+AGG 0.508321 6_2:+22115282 Msa0912690:intron
AATATAAATGGAAAAGTGCT+TGG 0.513022 6_2:-22117394 None:intergenic
GAACTACAACAGCAACATCA+AGG 0.528423 6_2:-22119382 None:intergenic
AAAGAATTGAAGAATTTGAC+GGG 0.534322 6_2:-22119288 None:intergenic
ATAGTTGGGGAAATGGTTCG+TGG 0.537164 6_2:-22113144 None:intergenic
CTCACGTTCATTGGCTAATG+CGG 0.541940 6_2:-22117645 None:intergenic
TCGATTATCCGAACCAAACA+TGG 0.552659 6_2:+22113255 Msa0912690:exon
TTGGGGAAATGGTTCGTGGA+TGG 0.553648 6_2:-22113140 None:intergenic
TTGTAGATATGGGACACTGC+AGG 0.562646 6_2:+22115277 Msa0912690:intron
ACAAAGTTGATATTGATGGC+GGG 0.570371 6_2:+22117425 Msa0912690:CDS
TCATGTGGAGTGTACAAAGT+GGG 0.570972 6_2:-22119335 None:intergenic
GGGTGGTTGTGCATGTTGAC+CGG 0.571294 6_2:+22119250 Msa0912690:exon
GTAAACGAGAACACAGCAAT+CGG 0.572135 6_2:-22115344 None:intergenic
AGGAGTGGTGTGCCTCAAAA+GGG 0.578968 6_2:+22117549 Msa0912690:CDS
GTTATCGTTCTTGGAGACAG+TGG 0.595335 6_2:+22113304 Msa0912690:CDS
TTACTTTGAGACATCTGCAA+AGG 0.600040 6_2:+22117580 Msa0912690:CDS
ATGCGGTCTTGGCAATACAT+AGG 0.600941 6_2:-22117628 None:intergenic
TTATCGTTCTTGGAGACAGT+GGG 0.601568 6_2:+22113305 Msa0912690:CDS
AACAAAGTTGATATTGATGG+CGG 0.603275 6_2:+22117424 Msa0912690:CDS
TGTAGATATGGGACACTGCA+GGG 0.605102 6_2:+22115278 Msa0912690:intron
TGGAGTGTACAAAGTGGGGA+AGG 0.611396 6_2:-22119330 None:intergenic
AACTACAACAGCAACATCAA+GGG 0.614349 6_2:-22119381 None:intergenic
TGTTCCAGAGAATGAGCAGA+GGG 0.618287 6_2:+22119229 Msa0912690:CDS
CTCATGTGGAGTGTACAAAG+TGG 0.618981 6_2:-22119336 None:intergenic
GTTGTAGTTCTGTTTACTTG+CGG 0.626810 6_2:+22119395 Msa0912690:three_prime_UTR
CTGATAAGAAAGCAAAGGAG+TGG 0.631616 6_2:+22117534 Msa0912690:CDS
CCAGAGAATGAGCAGAGGGG+TGG 0.645887 6_2:+22119233 Msa0912690:CDS
ATTTACTCAAGCATCTCATG+TGG 0.646464 6_2:-22119350 None:intergenic
GGTTTCTGATAAGAAAGCAA+AGG 0.657913 6_2:+22117529 Msa0912690:intron
CATGTGGAGTGTACAAAGTG+GGG 0.661635 6_2:-22119334 None:intergenic
CCACTTGTAGAGTAACTAGT+CGG 0.695643 6_2:-22115150 None:intergenic
TTGTTCCAGAGAATGAGCAG+AGG 0.709082 6_2:+22119228 Msa0912690:CDS
TGATGGCGGGAATAGTCGAG+TGG 0.710562 6_2:+22117438 Msa0912690:CDS
TACACTTGATAACTGGCACG+AGG 0.736931 6_2:+22115393 Msa0912690:CDS
GTTCCAGAGAATGAGCAGAG+GGG 0.763638 6_2:+22119230 Msa0912690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTATTATTTAAAATTTCAA+TGG - chr6_2:22114730-22114749 None:intergenic 10.0%
!!! ATTGAAATTTTAAATAATAG+AGG + chr6_2:22114729-22114748 Msa0912690:intron 10.0%
!!! TTGAAATTTTAAATAATAGA+GGG + chr6_2:22114730-22114749 Msa0912690:intron 10.0%
!!! CTATTTTATTTTTCAAATAT+CGG + chr6_2:22115017-22115036 Msa0912690:intron 10.0%
!! TCAAATTTATAAGATTTAAT+GGG - chr6_2:22118470-22118489 None:intergenic 10.0%
!! ATCAAATTTATAAGATTTAA+TGG - chr6_2:22118471-22118490 None:intergenic 10.0%
!!! ATTTTGTTTTCATTTTTGTT+AGG + chr6_2:22113420-22113439 Msa0912690:intron 15.0%
!!! TTTTGTTTTCATTTTTGTTA+GGG + chr6_2:22113421-22113440 Msa0912690:intron 15.0%
!! AATGAAGTTATAGTATTAAT+GGG - chr6_2:22116364-22116383 None:intergenic 15.0%
!! AAATGAAGTTATAGTATTAA+TGG - chr6_2:22116365-22116384 None:intergenic 15.0%
!! ATTAAAGATAAGAAAATGAT+AGG + chr6_2:22116741-22116760 Msa0912690:intron 15.0%
!! TTAAAGATAAGAAAATGATA+GGG + chr6_2:22116742-22116761 Msa0912690:intron 15.0%
!!! ATTTTATAATTTGTTTAGTG+TGG + chr6_2:22117307-22117326 Msa0912690:intron 15.0%
!!! TAATTACAATATTTTCCTTT+GGG - chr6_2:22118030-22118049 None:intergenic 15.0%
!!! TTATTTTTAGGTTTTAGTTT+TGG + chr6_2:22118110-22118129 Msa0912690:intron 15.0%
!!! TATTTTTAGGTTTTAGTTTT+GGG + chr6_2:22118111-22118130 Msa0912690:intron 15.0%
!! CAAATTTATAAGATTTAATG+GGG - chr6_2:22118469-22118488 None:intergenic 15.0%
!!! AATATTAAATTGGTTTTGTT+AGG + chr6_2:22119450-22119469 Msa0912690:three_prime_UTR 15.0%
!!! TAAATTTTGAATTTTACATC+AGG + chr6_2:22119482-22119501 Msa0912690:three_prime_UTR 15.0%
!!! AGGTTTTGATTTATATAGTT+GGG - chr6_2:22113161-22113180 None:intergenic 20.0%
!!! TTTATCGCAATTTTCAATAT+TGG + chr6_2:22113767-22113786 Msa0912690:intron 20.0%
!!! TTATCGCAATTTTCAATATT+GGG + chr6_2:22113964-22113983 Msa0912690:intron 20.0%
!!! ACAGTTTTAAATAAAGATCT+GGG - chr6_2:22114675-22114694 None:intergenic 20.0%
!!! TACAGTTTTAAATAAAGATC+TGG - chr6_2:22114676-22114695 None:intergenic 20.0%
!!! ATTTGATTTACATCGATTTA+AGG + chr6_2:22114983-22115002 Msa0912690:intron 20.0%
!! ATATCTATACAAGTAGTTAA+TGG - chr6_2:22115053-22115072 None:intergenic 20.0%
!! TGACAAAATTAGAAAAATAG+AGG - chr6_2:22115446-22115465 None:intergenic 20.0%
!! TGTATAGCCTATAATTTATT+TGG - chr6_2:22115511-22115530 None:intergenic 20.0%
!!! TTTGAAATAATGATGACAAT+GGG + chr6_2:22115597-22115616 Msa0912690:intron 20.0%
!! TTCTTTGGTGAAATAATAAT+GGG - chr6_2:22116237-22116256 None:intergenic 20.0%
!! ATTCTTTGGTGAAATAATAA+TGG - chr6_2:22116238-22116257 None:intergenic 20.0%
!! AATACTATAACTTCATTTCA+TGG + chr6_2:22116367-22116386 Msa0912690:intron 20.0%
!!! GGGAATTTTCATATATTTAT+TGG + chr6_2:22116762-22116781 Msa0912690:intron 20.0%
!! TAAAATGGTAATTAATGAAC+CGG - chr6_2:22117345-22117364 None:intergenic 20.0%
!!! TTTTCTTTATTGTCTATGAT+AGG + chr6_2:22117745-22117764 Msa0912690:intron 20.0%
!!! GTAATTACAATATTTTCCTT+TGG - chr6_2:22118031-22118050 None:intergenic 20.0%
!!! TGTAGTTTTGCATTATTTTT+AGG + chr6_2:22118098-22118117 Msa0912690:intron 20.0%
!!! AAAAGTTTAAAATCAAACTG+TGG - chr6_2:22118446-22118465 None:intergenic 20.0%
!! ATCTTATAAATTTGATCGTA+TGG + chr6_2:22118475-22118494 Msa0912690:intron 20.0%
!! AAAAGAATTGAAGAATTTGA+CGG - chr6_2:22119292-22119311 None:intergenic 20.0%
!!! TCAAATTCTTCAATTCTTTT+TGG + chr6_2:22119292-22119311 Msa0912690:three_prime_UTR 20.0%
!! TGTAGGAATGAATATTAAAT+TGG + chr6_2:22119440-22119459 Msa0912690:three_prime_UTR 20.0%
!!! GGTTTTGATTTATATAGTTG+GGG - chr6_2:22113160-22113179 None:intergenic 25.0%
!!! GAGGTTTTGATTTATATAGT+TGG - chr6_2:22113162-22113181 None:intergenic 25.0%
!!! TTAAGCGATTTTGAGATTTA+GGG - chr6_2:22113217-22113236 None:intergenic 25.0%
!!! ATTAAGCGATTTTGAGATTT+AGG - chr6_2:22113218-22113237 None:intergenic 25.0%
! AAAACTGAAAATGAAGTTTG+TGG - chr6_2:22113343-22113362 None:intergenic 25.0%
!! TCCTTTGCAATTTTATGATT+TGG + chr6_2:22113472-22113491 Msa0912690:intron 25.0%
! ACCAAATCATAAAATTGCAA+AGG - chr6_2:22113476-22113495 None:intergenic 25.0%
!!! TAATCATATCGTGGTTTTAT+CGG + chr6_2:22113704-22113723 Msa0912690:intron 25.0%
!!! TATCGGTATTTTGAATATCT+CGG + chr6_2:22113721-22113740 Msa0912690:intron 25.0%
! GAGATTCGAATTAATAATTG+TGG + chr6_2:22113807-22113826 Msa0912690:intron 25.0%
!!! ATTTTCAATATTGGGTTGAA+TGG + chr6_2:22113972-22113991 Msa0912690:intron 25.0%
! TCTTTGATATTGATGAGAAT+TGG + chr6_2:22114114-22114133 Msa0912690:intron 25.0%
! CTTTGATATTGATGAGAATT+GGG + chr6_2:22114115-22114134 Msa0912690:intron 25.0%
! TTTGATATTGATGAGAATTG+GGG + chr6_2:22114116-22114135 Msa0912690:intron 25.0%
!! ACATACAGAGTTTTACATAA+AGG - chr6_2:22114345-22114364 None:intergenic 25.0%
! TTAGCATGCTTAATGAATAT+TGG + chr6_2:22114780-22114799 Msa0912690:intron 25.0%
! GCTTAATGAATATTGGAAAT+TGG + chr6_2:22114787-22114806 Msa0912690:intron 25.0%
! AATGAATATTGGAAATTGGT+AGG + chr6_2:22114791-22114810 Msa0912690:intron 25.0%
! TAATTTCAGAGAAAATCGTA+AGG - chr6_2:22114827-22114846 None:intergenic 25.0%
!!! TACGATTTTCTCTGAAATTA+TGG + chr6_2:22114827-22114846 Msa0912690:intron 25.0%
!! TTTTCTAATTTTGTCACTCT+CGG + chr6_2:22115450-22115469 Msa0912690:intron 25.0%
! GTTGAGTCCAAATAAATTAT+AGG + chr6_2:22115501-22115520 Msa0912690:intron 25.0%
!!! CTTTGAAATAATGATGACAA+TGG + chr6_2:22115596-22115615 Msa0912690:intron 25.0%
! TAAGTATTCAGAATTTGTCT+TGG - chr6_2:22115624-22115643 None:intergenic 25.0%
!!! TATTTAGTTCTTACTTGTCT+TGG + chr6_2:22115825-22115844 Msa0912690:intron 25.0%
! AATGGTTATGAATGAATCAA+CGG + chr6_2:22115896-22115915 Msa0912690:intron 25.0%
! AACAGTAACACTTATTTAGA+GGG - chr6_2:22116068-22116087 None:intergenic 25.0%
! TAACAGTAACACTTATTTAG+AGG - chr6_2:22116069-22116088 None:intergenic 25.0%
! TATAGGCACATTAATAATGT+GGG - chr6_2:22116120-22116139 None:intergenic 25.0%
! TTATAGGCACATTAATAATG+TGG - chr6_2:22116121-22116140 None:intergenic 25.0%
! TTTAGTCATCATTAACATTG+AGG - chr6_2:22116172-22116191 None:intergenic 25.0%
!! ATGATGGAAAAAAGATACAA+CGG - chr6_2:22116531-22116550 None:intergenic 25.0%
!!! ATCTTTTTTCCATCATTCAT+TGG + chr6_2:22116535-22116554 Msa0912690:intron 25.0%
! ATTTACTTCGTAGAAATTCA+AGG - chr6_2:22117118-22117137 None:intergenic 25.0%
! TTACATAACAAATCATACTG+TGG - chr6_2:22117209-22117228 None:intergenic 25.0%
! TTATGTAATTGAACTGCTAT+GGG + chr6_2:22117221-22117240 Msa0912690:intron 25.0%
!!! AATATAAATGGAAAAGTGCT+TGG - chr6_2:22117397-22117416 None:intergenic 25.0%
!! ACTTTTCCATTTATATTGCT+TGG + chr6_2:22117400-22117419 Msa0912690:CDS 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - chr6_2:22117409-22117428 None:intergenic 25.0%
! GACAATAAAGAAAAATGTCT+AGG - chr6_2:22117739-22117758 None:intergenic 25.0%
! AGATAGTTTATGCAAACAAT+TGG - chr6_2:22118188-22118207 None:intergenic 25.0%
!!! AAAACCCTACTCTTATTTTT+CGG - chr6_2:22118664-22118683 None:intergenic 25.0%
! TAGTGAAATTATTGAAAGAG+AGG + chr6_2:22118956-22118975 Msa0912690:intron 25.0%
! TTGTGTTTCATTCCATAATT+AGG + chr6_2:22119048-22119067 Msa0912690:intron 25.0%
! TGTGTTTCATTCCATAATTA+GGG + chr6_2:22119049-22119068 Msa0912690:intron 25.0%
! AAAGAATTGAAGAATTTGAC+GGG - chr6_2:22119291-22119310 None:intergenic 25.0%
! TTTCACCAAAACAGTATAAA+GGG - chr6_2:22119671-22119690 None:intergenic 25.0%
AGAGAGATGAATGTTAGAAA+AGG - chr6_2:22113101-22113120 None:intergenic 30.0%
GATTTATATAGTTGGGGAAA+TGG - chr6_2:22113154-22113173 None:intergenic 30.0%
! TCGGATAATCGATTAATTTG+TGG - chr6_2:22113247-22113266 None:intergenic 30.0%
TTACTCAAAGTTATCGTTCT+TGG + chr6_2:22113295-22113314 Msa0912690:CDS 30.0%
GAAAATGAAGTTTGTGGATT+AGG - chr6_2:22113337-22113356 None:intergenic 30.0%
!! GTTTTCATTTTTGTTAGGGT+TGG + chr6_2:22113425-22113444 Msa0912690:intron 30.0%
! TTGCTTCATTTGCATGATTT+TGG + chr6_2:22113550-22113569 Msa0912690:intron 30.0%
! TGCTTCATTTGCATGATTTT+GGG + chr6_2:22113551-22113570 Msa0912690:intron 30.0%
ATAGTGGTGTTTATGTCAAT+TGG + chr6_2:22113576-22113595 Msa0912690:intron 30.0%
TAGTGGTGTTTATGTCAATT+GGG + chr6_2:22113577-22113596 Msa0912690:intron 30.0%
ATTACCGCAATTCAAAATCT+CGG - chr6_2:22113688-22113707 None:intergenic 30.0%
! GCAATTTTCAATATCGTGTA+GGG + chr6_2:22113773-22113792 Msa0912690:intron 30.0%
TAAGACAGAGTTTCAAACAA+CGG - chr6_2:22114215-22114234 None:intergenic 30.0%
TTTCTAAACAACTGCAATTG+AGG - chr6_2:22114443-22114462 None:intergenic 30.0%
GACAATTGTAGTTTAATGCA+TGG + chr6_2:22114578-22114597 Msa0912690:intron 30.0%
GTTTAATGCATGGAGTTTAA+TGG + chr6_2:22114588-22114607 Msa0912690:intron 30.0%
AATAGAGGGCAAATACTATT+TGG + chr6_2:22114744-22114763 Msa0912690:intron 30.0%
!! TTTTTCTCTAGCATTGAATG+TGG + chr6_2:22114881-22114900 Msa0912690:intron 30.0%
!! CATCGATTTAAGGTTATTCA+AGG + chr6_2:22114993-22115012 Msa0912690:intron 30.0%
! TTTTCAAATATCGGCATATG+TGG + chr6_2:22115026-22115045 Msa0912690:intron 30.0%
TTTCAAATATCGGCATATGT+GGG + chr6_2:22115027-22115046 Msa0912690:intron 30.0%
CAGCAATATAAAGCTACAAT+TGG + chr6_2:22115091-22115110 Msa0912690:CDS 30.0%
ATGTGTTTGTGTTGTAGATA+TGG + chr6_2:22115266-22115285 Msa0912690:intron 30.0%
TGTGTTTGTGTTGTAGATAT+GGG + chr6_2:22115267-22115286 Msa0912690:intron 30.0%
!!! TTGGTGTTGCATTTTATAGA+GGG + chr6_2:22115320-22115339 Msa0912690:CDS 30.0%
! CATTTGATACACTTGATAAC+TGG + chr6_2:22115386-22115405 Msa0912690:CDS 30.0%
CAATTGTCTCAACAAACTAT+TGG - chr6_2:22115745-22115764 None:intergenic 30.0%
AAGTAAGAACTAAATACTGG+AGG - chr6_2:22115821-22115840 None:intergenic 30.0%
GACAAGTAAGAACTAAATAC+TGG - chr6_2:22115824-22115843 None:intergenic 30.0%
TTCTACATTTCCTCTTACAA+TGG + chr6_2:22115878-22115897 Msa0912690:intron 30.0%
TCATTCATAACCATTGTAAG+AGG - chr6_2:22115891-22115910 None:intergenic 30.0%
GTTAGGTTATTCATCCAATT+TGG - chr6_2:22115940-22115959 None:intergenic 30.0%
GAATAACCTAACAAACGAAA+TGG + chr6_2:22115948-22115967 Msa0912690:intron 30.0%
! TGTTTTCCATTTCGTTTGTT+AGG - chr6_2:22115957-22115976 None:intergenic 30.0%
ACAGTAACACTTATTTAGAG+GGG - chr6_2:22116067-22116086 None:intergenic 30.0%
ATAGGCACATTAATAATGTG+GGG - chr6_2:22116119-22116138 None:intergenic 30.0%
! AAAGAATGCCTTTTGCTTAT+GGG + chr6_2:22116251-22116270 Msa0912690:intron 30.0%
TTAGAGACCAAGTTTATTGT+TGG + chr6_2:22116450-22116469 Msa0912690:intron 30.0%
AAAACCACCAACAATAAACT+TGG - chr6_2:22116460-22116479 None:intergenic 30.0%
!!! AAGTTTATTGTTGGTGGTTT+TGG + chr6_2:22116459-22116478 Msa0912690:intron 30.0%
CCTTGGTTTATATAGAATTC+TGG - chr6_2:22116637-22116656 None:intergenic 30.0%
CCAGAATTCTATATAAACCA+AGG + chr6_2:22116634-22116653 Msa0912690:intron 30.0%
AGCTCTCAAGTGAAAATTAA+TGG + chr6_2:22116674-22116693 Msa0912690:intron 30.0%
! AAATTTACGAGGATTTTCAC+AGG - chr6_2:22116700-22116719 None:intergenic 30.0%
GTTAGTATCAATCTAAGTGA+AGG - chr6_2:22116840-22116859 None:intergenic 30.0%
ACAGTATGTAATGTGTTACA+AGG - chr6_2:22116944-22116963 None:intergenic 30.0%
TAACACATTACATACTGTCA+AGG + chr6_2:22116946-22116965 Msa0912690:intron 30.0%
AAATTATATAACCCGCATCA+TGG + chr6_2:22117134-22117153 Msa0912690:intron 30.0%
GTTATGTAATTGAACTGCTA+TGG + chr6_2:22117220-22117239 Msa0912690:intron 30.0%
!! GGAAACAAAGTTGATATTGA+TGG + chr6_2:22117421-22117440 Msa0912690:CDS 30.0%
!! AACAAAGTTGATATTGATGG+CGG + chr6_2:22117424-22117443 Msa0912690:CDS 30.0%
GGTCTAATTATGTTCTATAC+AGG + chr6_2:22117508-22117527 Msa0912690:intron 30.0%
GTCTAGGAACTAAACATATT+TGG - chr6_2:22117723-22117742 None:intergenic 30.0%
TTGTCTATGATAGGACATTA+TGG + chr6_2:22117754-22117773 Msa0912690:intron 30.0%
TTGTGTAGTAGATAGAGTAT+AGG + chr6_2:22117896-22117915 Msa0912690:intron 30.0%
TTACAGATAAAAAGATAGCC+AGG - chr6_2:22117926-22117945 None:intergenic 30.0%
TTTATAGCTATGCGTATTCA+GGG - chr6_2:22117969-22117988 None:intergenic 30.0%
ATTTATAGCTATGCGTATTC+AGG - chr6_2:22117970-22117989 None:intergenic 30.0%
TATAAATCACATGGCTTCTT+TGG + chr6_2:22117983-22118002 Msa0912690:intron 30.0%
AGTTCAGACTAAATGTTAAG+AGG - chr6_2:22118151-22118170 None:intergenic 30.0%
TGTTTGCATAAACTATCTCT+CGG + chr6_2:22118190-22118209 Msa0912690:intron 30.0%
GGACAGTAGTATTTAACATA+GGG + chr6_2:22118282-22118301 Msa0912690:intron 30.0%
GACAGTAGTATTTAACATAG+GGG + chr6_2:22118283-22118302 Msa0912690:intron 30.0%
ACAGTAGTATTTAACATAGG+GGG + chr6_2:22118284-22118303 Msa0912690:intron 30.0%
! TCGATTTTCTTCCATCTTTT+GGG + chr6_2:22118540-22118559 Msa0912690:intron 30.0%
CTCATATCTGATACAAAGAA+AGG - chr6_2:22119123-22119142 None:intergenic 30.0%
! CAGATATTTTCAACCTATTC+CGG + chr6_2:22119199-22119218 Msa0912690:intron 30.0%
!! CTTTAGAATGTTGCATTTGT+AGG + chr6_2:22119423-22119442 Msa0912690:three_prime_UTR 30.0%
! TTTACATCAGGATACTGTTT+TGG + chr6_2:22119494-22119513 Msa0912690:three_prime_UTR 30.0%
GTTTCACCAAAACAGTATAA+AGG - chr6_2:22119672-22119691 None:intergenic 30.0%
AAACTAGAGATCGTTATAGT+TGG + chr6_2:22119688-22119707 Msa0912690:three_prime_UTR 30.0%
!!! TGATTGTGTTGTTTTGTGAG+AGG - chr6_2:22113181-22113200 None:intergenic 35.0%
GAGAGTGGAATTTATGATTG+TGG + chr6_2:22113611-22113630 Msa0912690:intron 35.0%
! CGCAATTTTCAATATCGTGT+AGG + chr6_2:22113772-22113791 Msa0912690:intron 35.0%
! ATCGTGTAGGGATGTATTTT+TGG + chr6_2:22113785-22113804 Msa0912690:intron 35.0%
! TATCGCGATTTTCAATATCG+CGG + chr6_2:22113917-22113936 Msa0912690:intron 35.0%
!! TTCAATATTGGGTTGAATGG+TGG + chr6_2:22113975-22113994 Msa0912690:intron 35.0%
AAACCTTATTGTCGTAGCTT+AGG + chr6_2:22114062-22114081 Msa0912690:intron 35.0%
AACCTTATTGTCGTAGCTTA+GGG + chr6_2:22114063-22114082 Msa0912690:intron 35.0%
!! AACTCTGTCTTATTTCAGAG+TGG + chr6_2:22114223-22114242 Msa0912690:intron 35.0%
GACAAACCATTACCACAATT+CGG - chr6_2:22114249-22114268 None:intergenic 35.0%
TGTCACAGTCATCGATAATA+TGG + chr6_2:22114265-22114284 Msa0912690:intron 35.0%
AAGAAGCTGGATCATTGTAA+TGG + chr6_2:22114372-22114391 Msa0912690:intron 35.0%
ATTTCAAAGCAGCTGAATTG+CGG + chr6_2:22114525-22114544 Msa0912690:intron 35.0%
TAATGCATGGAGTTTAATGG+CGG + chr6_2:22114591-22114610 Msa0912690:intron 35.0%
! CAGTCTAAGATGCAACAATA+GGG - chr6_2:22114648-22114667 None:intergenic 35.0%
! ACAGTCTAAGATGCAACAAT+AGG - chr6_2:22114649-22114668 None:intergenic 35.0%
!!! CTTGGTGTTGCATTTTATAG+AGG + chr6_2:22115319-22115338 Msa0912690:CDS 35.0%
!!! TGGTGTTGCATTTTATAGAG+GGG + chr6_2:22115321-22115340 Msa0912690:CDS 35.0%
TATGTCATAACTCATGACCA+TGG + chr6_2:22115698-22115717 Msa0912690:intron 35.0%
GTTGCTATAAAGCAAAACCA+TGG - chr6_2:22115718-22115737 None:intergenic 35.0%
AACAGTGAAGGAAACCAAAT+TGG + chr6_2:22115923-22115942 Msa0912690:intron 35.0%
TTTCTGGGTTCTATAGAGTA+AGG - chr6_2:22116007-22116026 None:intergenic 35.0%
AGTAACACTTATTTAGAGGG+GGG - chr6_2:22116065-22116084 None:intergenic 35.0%
CAGTAACACTTATTTAGAGG+GGG - chr6_2:22116066-22116085 None:intergenic 35.0%
GAGGATAAAACATAATGTGG+GGG - chr6_2:22116095-22116114 None:intergenic 35.0%
GGAGGATAAAACATAATGTG+GGG - chr6_2:22116096-22116115 None:intergenic 35.0%
GGGAGGATAAAACATAATGT+GGG - chr6_2:22116097-22116116 None:intergenic 35.0%
TAGGCACATTAATAATGTGG+GGG - chr6_2:22116118-22116137 None:intergenic 35.0%
!! TTGTAGGGGGAAGTATTTAT+AGG - chr6_2:22116137-22116156 None:intergenic 35.0%
CATCATTAACATTGAGGACA+AGG - chr6_2:22116166-22116185 None:intergenic 35.0%
CTAAATCCAATAAGCTAGCA+TGG + chr6_2:22116187-22116206 Msa0912690:intron 35.0%
!! CATAAGCAAAAGGCATTCTT+TGG - chr6_2:22116252-22116271 None:intergenic 35.0%
! CAAAGAATGCCTTTTGCTTA+TGG + chr6_2:22116250-22116269 Msa0912690:intron 35.0%
ATACAACGGTGAAATCTGAT+GGG - chr6_2:22116517-22116536 None:intergenic 35.0%
TCATGCAGAGAATGGAAAAA+GGG - chr6_2:22116577-22116596 None:intergenic 35.0%
AAATTTGACCTAGAGCTCTA+TGG + chr6_2:22116714-22116733 Msa0912690:intron 35.0%
TAATATAGCCATAGAGCTCT+AGG - chr6_2:22116725-22116744 None:intergenic 35.0%
ACAGCTAATCTGAACTATCA+AGG - chr6_2:22116801-22116820 None:intergenic 35.0%
AGTATCAATCTAAGTGAAGC+AGG - chr6_2:22116862-22116881 None:intergenic 35.0%
CAAAAACTAGCAGCAAACTA+AGG - chr6_2:22117030-22117049 None:intergenic 35.0%
!!! CTTAGTTTGCTGCTAGTTTT+TGG + chr6_2:22117028-22117047 Msa0912690:intron 35.0%
AATTCAAGGAAGACGAGAAA+AGG - chr6_2:22117104-22117123 None:intergenic 35.0%
ACCAAAAATATCCATGATGC+GGG - chr6_2:22117148-22117167 None:intergenic 35.0%
CACCAAAAATATCCATGATG+CGG - chr6_2:22117149-22117168 None:intergenic 35.0%
! AGTGTGGATGCATAATTTTC+CGG + chr6_2:22117323-22117342 Msa0912690:intron 35.0%
CCTGTGACACAACATTAAAA+TGG - chr6_2:22117360-22117379 None:intergenic 35.0%
!! CCATTTTAATGTTGTGTCAC+AGG + chr6_2:22117357-22117376 Msa0912690:intron 35.0%
!! GAAAAGTGCTTGGATTAGAA+GGG - chr6_2:22117387-22117406 None:intergenic 35.0%
!! ACAAAGTTGATATTGATGGC+GGG + chr6_2:22117425-22117444 Msa0912690:CDS 35.0%
AATTATTCATCTCCTGCTCA+AGG + chr6_2:22117486-22117505 Msa0912690:intron 35.0%
ATTATTCATCTCCTGCTCAA+GGG + chr6_2:22117487-22117506 Msa0912690:intron 35.0%
GGTTTCTGATAAGAAAGCAA+AGG + chr6_2:22117529-22117548 Msa0912690:intron 35.0%
TTTGCAGATGTCTCAAAGTA+AGG - chr6_2:22117581-22117600 None:intergenic 35.0%
!! TTACTTTGAGACATCTGCAA+AGG + chr6_2:22117580-22117599 Msa0912690:CDS 35.0%
TCTATGATAGGACATTATGG+TGG + chr6_2:22117757-22117776 Msa0912690:intron 35.0%
TACTACACAACACTACTAAC+TGG - chr6_2:22117886-22117905 None:intergenic 35.0%
ACGCATAGCTATAAATCACA+TGG + chr6_2:22117974-22117993 Msa0912690:intron 35.0%
TTAAATACTACTGTCCCAAG+CGG - chr6_2:22118278-22118297 None:intergenic 35.0%
GGGACAGTAGTATTTAACAT+AGG + chr6_2:22118281-22118300 Msa0912690:intron 35.0%
TTTCACGAGTAGTGAGAAAT+GGG - chr6_2:22118336-22118355 None:intergenic 35.0%
! TTTTCACGAGTAGTGAGAAA+TGG - chr6_2:22118337-22118356 None:intergenic 35.0%
! CTACTCGTGAAAAAGTTGAT+TGG + chr6_2:22118344-22118363 Msa0912690:intron 35.0%
! AAAAAGTTGATTGGTGAAGC+TGG + chr6_2:22118353-22118372 Msa0912690:intron 35.0%
TGAAGCTGGTAGTTAACATA+GGG + chr6_2:22118367-22118386 Msa0912690:intron 35.0%
! CTCGATTTTCTTCCATCTTT+TGG + chr6_2:22118539-22118558 Msa0912690:intron 35.0%
! CGATTTTCTTCCATCTTTTG+GGG + chr6_2:22118541-22118560 Msa0912690:intron 35.0%
AACGAAAAGTCAATGAGACT+AGG - chr6_2:22118567-22118586 None:intergenic 35.0%
ACCAACTAACCTAACTGAAA+GGG - chr6_2:22118610-22118629 None:intergenic 35.0%
TGTCACCGAAAAATAAGAGT+AGG + chr6_2:22118656-22118675 Msa0912690:intron 35.0%
GTCACCGAAAAATAAGAGTA+GGG + chr6_2:22118657-22118676 Msa0912690:intron 35.0%
!!! GAGTAGGGTTTTAGAATGAA+AGG + chr6_2:22118672-22118691 Msa0912690:intron 35.0%
!!! GGTTTTAGAATGAAAGGAAG+AGG + chr6_2:22118678-22118697 Msa0912690:intron 35.0%
CAGTTTCCTCTTAAATCCTT+AGG - chr6_2:22118706-22118725 None:intergenic 35.0%
AAGGATTTAAGAGGAAACTG+AGG + chr6_2:22118706-22118725 Msa0912690:intron 35.0%
GTGAATCTCTACCCTAATTA+TGG - chr6_2:22119063-22119082 None:intergenic 35.0%
AGAAAGGTGACAGTATAACA+TGG - chr6_2:22119107-22119126 None:intergenic 35.0%
! TTGAAGAATTTGACGGGTAT+TGG - chr6_2:22119285-22119304 None:intergenic 35.0%
ATTTACTCAAGCATCTCATG+TGG - chr6_2:22119353-22119372 None:intergenic 35.0%
AACTACAACAGCAACATCAA+GGG - chr6_2:22119384-22119403 None:intergenic 35.0%
! GTTGTAGTTCTGTTTACTTG+CGG + chr6_2:22119395-22119414 Msa0912690:three_prime_UTR 35.0%
ACAACCTCTTGTGTAAAAAC+AGG + chr6_2:22119565-22119584 Msa0912690:intron 35.0%
CAACCTCTTGTGTAAAAACA+GGG + chr6_2:22119566-22119585 Msa0912690:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr6_2:22119572-22119591 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr6_2:22119571-22119590 Msa0912690:intron 35.0%
TTGGCAGTGATAGCAAAATT+AGG + chr6_2:22119707-22119726 Msa0912690:three_prime_UTR 35.0%
TCGATTATCCGAACCAAACA+TGG + chr6_2:22113255-22113274 Msa0912690:exon 40.0%
GAGTAAAGTTCTTCTGCGTA+AGG - chr6_2:22113281-22113300 None:intergenic 40.0%
TTATCGTTCTTGGAGACAGT+GGG + chr6_2:22113305-22113324 Msa0912690:CDS 40.0%
!! TGCATGATTTTGGGTCATAG+TGG + chr6_2:22113560-22113579 Msa0912690:intron 40.0%
TGTCAATTGGGATGCATTGT+TGG + chr6_2:22113589-22113608 Msa0912690:intron 40.0%
GAATTGCGGTAATCATATCG+TGG + chr6_2:22113695-22113714 Msa0912690:intron 40.0%
!! TTGAATATCTCGGAGTGTTG+TGG + chr6_2:22113731-22113750 Msa0912690:intron 40.0%
! CTTGACGAGATTTTGAATCG+CGG + chr6_2:22113877-22113896 Msa0912690:intron 40.0%
! TATCGCGATTTTTGATACCG+TGG + chr6_2:22114002-22114021 Msa0912690:intron 40.0%
TTTGATACCGTGGAGATTTG+TGG + chr6_2:22114012-22114031 Msa0912690:intron 40.0%
GGAGAACTGTGTTTAAATCG+CGG + chr6_2:22114286-22114305 Msa0912690:intron 40.0%
! GTATGTCACTTCAAAGAAGC+TGG + chr6_2:22114359-22114378 Msa0912690:intron 40.0%
CAGTCTGATCTGCAACATTA+TGG - chr6_2:22114473-22114492 None:intergenic 40.0%
!! AGCTGCTTTGAAATGAGACA+CGG - chr6_2:22114519-22114538 None:intergenic 40.0%
TGGAAATTGGTAGGTAGAAG+TGG + chr6_2:22114800-22114819 Msa0912690:intron 40.0%
! CTCTAGCATTGAATGTGGTT+CGG + chr6_2:22114886-22114905 Msa0912690:intron 40.0%
! ATGTGGTTCGGCACAAAATT+AGG + chr6_2:22114898-22114917 Msa0912690:intron 40.0%
! TGTGGTTCGGCACAAAATTA+GGG + chr6_2:22114899-22114918 Msa0912690:intron 40.0%
GTCATCGATCTGCAATTCTT+TGG - chr6_2:22115131-22115150 None:intergenic 40.0%
CCACTTGTAGAGTAACTAGT+CGG - chr6_2:22115153-22115172 None:intergenic 40.0%
! CGACTAGTTACTCTACAAGT+GGG + chr6_2:22115151-22115170 Msa0912690:intron 40.0%
CAGGAGAGATTTCAAAGTCT+TGG + chr6_2:22115301-22115320 Msa0912690:CDS 40.0%
GTAAACGAGAACACAGCAAT+CGG - chr6_2:22115347-22115366 None:intergenic 40.0%
ATCAACGGAGAAAACAGTGA+AGG + chr6_2:22115911-22115930 Msa0912690:intron 40.0%
GAGTTATGCAATTCCTGAGT+GGG - chr6_2:22116030-22116049 None:intergenic 40.0%
GGGGAGGATAAAACATAATG+TGG - chr6_2:22116098-22116117 None:intergenic 40.0%
AGGCACATTAATAATGTGGG+GGG - chr6_2:22116117-22116136 None:intergenic 40.0%
AGGACAAGGTGAAACTTGTA+GGG - chr6_2:22116152-22116171 None:intergenic 40.0%
CAGAGTCCATATCAAACAGT+GGG - chr6_2:22116214-22116233 None:intergenic 40.0%
GTTTCTCTGTATTATGCTGC+TGG - chr6_2:22116297-22116316 None:intergenic 40.0%
GTACAGTTTAGCATAGAGTC+AGG - chr6_2:22116337-22116356 None:intergenic 40.0%
ACTTCATTTCATGGACAGCT+TGG + chr6_2:22116376-22116395 Msa0912690:intron 40.0%
CTTCATTTCATGGACAGCTT+GGG + chr6_2:22116377-22116396 Msa0912690:intron 40.0%
TCCTCTACGTACAATTTGGT+TGG + chr6_2:22116402-22116421 Msa0912690:intron 40.0%
TCCAACCAAATTGTACGTAG+AGG - chr6_2:22116406-22116425 None:intergenic 40.0%
GAGACCAAGTTTATTGTTGG+TGG + chr6_2:22116453-22116472 Msa0912690:intron 40.0%
GATACAACGGTGAAATCTGA+TGG - chr6_2:22116518-22116537 None:intergenic 40.0%
CTAAGGCAACCAATGAATGA+TGG - chr6_2:22116547-22116566 None:intergenic 40.0%
GGAAAAAGGGAAGCTAACTA+AGG - chr6_2:22116564-22116583 None:intergenic 40.0%
GTCATGCAGAGAATGGAAAA+AGG - chr6_2:22116578-22116597 None:intergenic 40.0%
!! AGCTCTAGGTCAAATTTACG+AGG - chr6_2:22116711-22116730 None:intergenic 40.0%
GAGTTAGTTAAAGTGAGTGC+AGG - chr6_2:22116887-22116906 None:intergenic 40.0%
TGTAATGTGTTACAAGGCAC+TGG - chr6_2:22116938-22116957 None:intergenic 40.0%
! ACCCGCATCATGGATATTTT+TGG + chr6_2:22117144-22117163 Msa0912690:intron 40.0%
CACAAACTTCAACATCAGGT+GGG - chr6_2:22117277-22117296 None:intergenic 40.0%
!! GGAAAAGTGCTTGGATTAGA+AGG - chr6_2:22117388-22117407 None:intergenic 40.0%
ACATAATTAGACCCTTGAGC+AGG - chr6_2:22117501-22117520 None:intergenic 40.0%
CTGATAAGAAAGCAAAGGAG+TGG + chr6_2:22117534-22117553 Msa0912690:CDS 40.0%
! GTAAGGAATGTTCCCTTTTG+AGG - chr6_2:22117564-22117583 None:intergenic 40.0%
CAGATAAAAAGATAGCCAGG+AGG - chr6_2:22117923-22117942 None:intergenic 40.0%
TAAATACTACTGTCCCAAGC+GGG - chr6_2:22118277-22118296 None:intergenic 40.0%
CAGCTACATAAAGCCATAAC+TGG - chr6_2:22118313-22118332 None:intergenic 40.0%
GTGAAGCTGGTAGTTAACAT+AGG + chr6_2:22118366-22118385 Msa0912690:intron 40.0%
!! AAGAAGCACTTCAGAGTGAA+TGG + chr6_2:22118412-22118431 Msa0912690:intron 40.0%
! TGAAAGGGGATATTTGGAGT+TGG - chr6_2:22118595-22118614 None:intergenic 40.0%
CCTAACTGAAAGGGGATATT+TGG - chr6_2:22118601-22118620 None:intergenic 40.0%
CCAAATATCCCCTTTCAGTT+AGG + chr6_2:22118598-22118617 Msa0912690:intron 40.0%
CCAACTAACCTAACTGAAAG+GGG - chr6_2:22118609-22118628 None:intergenic 40.0%
GACCAACTAACCTAACTGAA+AGG - chr6_2:22118611-22118630 None:intergenic 40.0%
AAGAGGAAACTGAGGTCTTA+TGG + chr6_2:22118714-22118733 Msa0912690:intron 40.0%
! AGAGGAAACTGAGGTCTTAT+GGG + chr6_2:22118715-22118734 Msa0912690:intron 40.0%
TCATGTGGAGTGTACAAAGT+GGG - chr6_2:22119338-22119357 None:intergenic 40.0%
GAACTACAACAGCAACATCA+AGG - chr6_2:22119385-22119404 None:intergenic 40.0%
! TTACACAAGAGGTTGTTTCC+AGG - chr6_2:22119561-22119580 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr6_2:22119597-22119616 Msa0912690:intron 40.0%
AAACAGTATAAAGGGCAACC+CGG - chr6_2:22119663-22119682 None:intergenic 40.0%
! GGTTGCCCTTTATACTGTTT+TGG + chr6_2:22119663-22119682 Msa0912690:intron 40.0%
ATAGTTGGGGAAATGGTTCG+TGG - chr6_2:22113147-22113166 None:intergenic 45.0%
GTTATCGTTCTTGGAGACAG+TGG + chr6_2:22113304-22113323 Msa0912690:CDS 45.0%
ATCTCGGCGTGATGTACATT+CGG - chr6_2:22113672-22113691 None:intergenic 45.0%
! CACGCCGAGATTTTGAATTG+CGG + chr6_2:22113681-22113700 Msa0912690:intron 45.0%
TTCAATATCGCGGAGAGTTG+TGG + chr6_2:22113927-22113946 Msa0912690:intron 45.0%
CACCCTAAGCTACGACAATA+AGG - chr6_2:22114068-22114087 None:intergenic 45.0%
GGTAAAATACTGCCTCGATC+AGG + chr6_2:22114137-22114156 Msa0912690:intron 45.0%
ATTTCAGAGTGGCCGAATTG+TGG + chr6_2:22114234-22114253 Msa0912690:intron 45.0%
AGGACTGCGACTACAACATT+GGG - chr6_2:22114325-22114344 None:intergenic 45.0%
AAGGACTGCGACTACAACAT+TGG - chr6_2:22114326-22114345 None:intergenic 45.0%
AAGCAGCTGAATTGCGGTAA+TGG + chr6_2:22114531-22114550 Msa0912690:intron 45.0%
GGCGGTTTCAATCAATGTTG+TGG + chr6_2:22114609-22114628 Msa0912690:intron 45.0%
! CCGACTAGTTACTCTACAAG+TGG + chr6_2:22115150-22115169 Msa0912690:intron 45.0%
TTGTAGATATGGGACACTGC+AGG + chr6_2:22115277-22115296 Msa0912690:intron 45.0%
TGTAGATATGGGACACTGCA+GGG + chr6_2:22115278-22115297 Msa0912690:intron 45.0%
! TACACTTGATAACTGGCACG+AGG + chr6_2:22115393-22115412 Msa0912690:CDS 45.0%
GATTCCTTTGAGTGCGTTTG+AGG + chr6_2:22115544-22115563 Msa0912690:intron 45.0%
CAAACCTCAAACGCACTCAA+AGG - chr6_2:22115551-22115570 None:intergenic 45.0%
GACCTGTATTACCATCCAAG+AGG + chr6_2:22115847-22115866 Msa0912690:intron 45.0%
CTCCTCTTGGATGGTAATAC+AGG - chr6_2:22115852-22115871 None:intergenic 45.0%
CTGTATTACCATCCAAGAGG+AGG + chr6_2:22115850-22115869 Msa0912690:intron 45.0%
TTACCATCCAAGAGGAGGAT+TGG + chr6_2:22115855-22115874 Msa0912690:intron 45.0%
TGTAGAACCAATCCTCCTCT+TGG - chr6_2:22115865-22115884 None:intergenic 45.0%
ACAGTGATGAACCACAGAGA+AGG + chr6_2:22115974-22115993 Msa0912690:intron 45.0%
CAGTGATGAACCACAGAGAA+GGG + chr6_2:22115975-22115994 Msa0912690:intron 45.0%
! CAATTCCTGAGTGGGTTTCT+GGG - chr6_2:22116022-22116041 None:intergenic 45.0%
GGAGTTATGCAATTCCTGAG+TGG - chr6_2:22116031-22116050 None:intergenic 45.0%
CACATTAATAATGTGGGGGG+AGG - chr6_2:22116114-22116133 None:intergenic 45.0%
GACAAGGTGAAACTTGTAGG+GGG - chr6_2:22116150-22116169 None:intergenic 45.0%
GGACAAGGTGAAACTTGTAG+GGG - chr6_2:22116151-22116170 None:intergenic 45.0%
GAGGACAAGGTGAAACTTGT+AGG - chr6_2:22116153-22116172 None:intergenic 45.0%
CATGGTCCCACTGTTTGATA+TGG + chr6_2:22116205-22116224 Msa0912690:intron 45.0%
GCAGAGTCCATATCAAACAG+TGG - chr6_2:22116215-22116234 None:intergenic 45.0%
! AATGCCTTTTGCTTATGGGC+TGG + chr6_2:22116255-22116274 Msa0912690:intron 45.0%
TCTGTATTATGCTGCTGGAC+AGG - chr6_2:22116292-22116311 None:intergenic 45.0%
ATAGAGTCAGGATGCAGGAA+AGG - chr6_2:22116325-22116344 None:intergenic 45.0%
TTAGCATAGAGTCAGGATGC+AGG - chr6_2:22116330-22116349 None:intergenic 45.0%
GGCTTCCTCTACGTACAATT+TGG + chr6_2:22116398-22116417 Msa0912690:intron 45.0%
!!! TGGTTTTGGCCCATTTGCTT+TGG + chr6_2:22116473-22116492 Msa0912690:intron 45.0%
GACCCTGTTCCAAAGCAAAT+GGG - chr6_2:22116485-22116504 None:intergenic 45.0%
! GAAATCTGATGGGTACCAAC+TGG - chr6_2:22116507-22116526 None:intergenic 45.0%
AGAAGCTGTCATGCAGAGAA+TGG - chr6_2:22116585-22116604 None:intergenic 45.0%
CAGTTTAGCTAGTGGCTGAA+GGG + chr6_2:22116611-22116630 Msa0912690:intron 45.0%
! CAGATTAGCTGTTTGCACAC+TGG + chr6_2:22116809-22116828 Msa0912690:intron 45.0%
!! AGGCACTGGTTAGTTTCTGA+CGG - chr6_2:22116924-22116943 None:intergenic 45.0%
ACTGTCAAGGCTTTACTGAC+TGG + chr6_2:22116959-22116978 Msa0912690:intron 45.0%
! GAAACCCTGTTCGGTGATAT+AGG - chr6_2:22116987-22117006 None:intergenic 45.0%
!! CAAAGCACTGAAACCCTGTT+CGG - chr6_2:22116996-22117015 None:intergenic 45.0%
CCACAAACTTCAACATCAGG+TGG - chr6_2:22117278-22117297 None:intergenic 45.0%
CCACCTGATGTTGAAGTTTG+TGG + chr6_2:22117275-22117294 Msa0912690:intron 45.0%
GCTCCACAAACTTCAACATC+AGG - chr6_2:22117281-22117300 None:intergenic 45.0%
ATGCGGTCTTGGCAATACAT+AGG - chr6_2:22117631-22117650 None:intergenic 45.0%
! TTCATTGGCTAATGCGGTCT+TGG - chr6_2:22117642-22117661 None:intergenic 45.0%
! CTCACGTTCATTGGCTAATG+CGG - chr6_2:22117648-22117667 None:intergenic 45.0%
CATGTCTTGCTCACGTTCAT+TGG - chr6_2:22117657-22117676 None:intergenic 45.0%
AGATAGAGTATAGGACCTCC+TGG + chr6_2:22117905-22117924 Msa0912690:intron 45.0%
ACGAAGCTGCCAGTTAACAT+AGG + chr6_2:22118246-22118265 Msa0912690:intron 45.0%
CGAAGCTGCCAGTTAACATA+GGG + chr6_2:22118247-22118266 Msa0912690:intron 45.0%
GAAGCTGCCAGTTAACATAG+GGG + chr6_2:22118248-22118267 Msa0912690:intron 45.0%
TAACATAGGGAACTCCCACT+TGG + chr6_2:22118380-22118399 Msa0912690:intron 45.0%
AACATAGGGAACTCCCACTT+GGG + chr6_2:22118381-22118400 Msa0912690:intron 45.0%
TTCTTCCTACTGTCCCAAGT+GGG - chr6_2:22118397-22118416 None:intergenic 45.0%
CCCCTTTCAGTTAGGTTAGT+TGG + chr6_2:22118606-22118625 Msa0912690:intron 45.0%
!! ATGAAAGGAAGAGGTGCCTA+AGG + chr6_2:22118687-22118706 Msa0912690:intron 45.0%
! GAGGTGCCTAAGGATTTAAG+AGG + chr6_2:22118697-22118716 Msa0912690:intron 45.0%
! GAAACTGAGGTCTTATGGGA+TGG + chr6_2:22118719-22118738 Msa0912690:intron 45.0%
GTGCAGACACTCAGAAATCT+CGG + chr6_2:22118741-22118760 Msa0912690:intron 45.0%
ATTGAGCCGTTATGGGATTG+CGG + chr6_2:22118791-22118810 Msa0912690:intron 45.0%
!! TGCTCATTCTCTGGAACAAC+AGG - chr6_2:22119227-22119246 None:intergenic 45.0%
TTGTTCCAGAGAATGAGCAG+AGG + chr6_2:22119228-22119247 Msa0912690:CDS 45.0%
TGTTCCAGAGAATGAGCAGA+GGG + chr6_2:22119229-22119248 Msa0912690:CDS 45.0%
!! CGGGTATTGGAGAGAAATTC+CGG - chr6_2:22119272-22119291 None:intergenic 45.0%
CATGTGGAGTGTACAAAGTG+GGG - chr6_2:22119337-22119356 None:intergenic 45.0%
CTCATGTGGAGTGTACAAAG+TGG - chr6_2:22119339-22119358 None:intergenic 45.0%
GTTGTTGTCATGTGACCGTA+AGG + chr6_2:22119521-22119540 Msa0912690:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr6_2:22119593-22119612 Msa0912690:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr6_2:22119596-22119615 Msa0912690:intron 45.0%
TTGGGGAAATGGTTCGTGGA+TGG - chr6_2:22113143-22113162 None:intergenic 50.0%
GCGTAAGGCCATGTTTGGTT+CGG - chr6_2:22113266-22113285 None:intergenic 50.0%
CTTCTGCGTAAGGCCATGTT+TGG - chr6_2:22113271-22113290 None:intergenic 50.0%
TGGGATGCATTGTTGGAGAG+TGG + chr6_2:22113596-22113615 Msa0912690:intron 50.0%
ATCGAGGCCACAAATCTCCA+CGG - chr6_2:22114022-22114041 None:intergenic 50.0%
TTTCCCAGCGATTGCAATCG+AGG - chr6_2:22114038-22114057 None:intergenic 50.0%
TACTGCCTCGATCAGGATAG+CGG + chr6_2:22114144-22114163 Msa0912690:intron 50.0%
TTTCTCCGCTATCCTGATCG+AGG - chr6_2:22114152-22114171 None:intergenic 50.0%
GAGTGGCCGAATTGTGGTAA+TGG + chr6_2:22114240-22114259 Msa0912690:intron 50.0%
GGACTGCGACTACAACATTG+GGG - chr6_2:22114324-22114343 None:intergenic 50.0%
!! GCACGAGGAGTTTCTGAAAC+AGG + chr6_2:22115408-22115427 Msa0912690:CDS 50.0%
GAACCAATCCTCCTCTTGGA+TGG - chr6_2:22115861-22115880 None:intergenic 50.0%
AAGGAGTTGACCCTTCTCTG+TGG - chr6_2:22115988-22116007 None:intergenic 50.0%
TAGAACCCAGAAACCCACTC+AGG + chr6_2:22116014-22116033 Msa0912690:intron 50.0%
! GCAATTCCTGAGTGGGTTTC+TGG - chr6_2:22116023-22116042 None:intergenic 50.0%
TTAGAGGGGGGCAACGAATT+GGG - chr6_2:22116053-22116072 None:intergenic 50.0%
TTTAGAGGGGGGCAACGAAT+TGG - chr6_2:22116054-22116073 None:intergenic 50.0%
! GTGGGACCATGCTAGCTTAT+TGG - chr6_2:22116196-22116215 None:intergenic 50.0%
TGGTCCAGCCCATAAGCAAA+AGG - chr6_2:22116262-22116281 None:intergenic 50.0%
! GCTGCTGGACAGGAAGATTT+TGG - chr6_2:22116282-22116301 None:intergenic 50.0%
!! TGGCCCATTTGCTTTGGAAC+AGG + chr6_2:22116479-22116498 Msa0912690:intron 50.0%
!! GGCCCATTTGCTTTGGAACA+GGG + chr6_2:22116480-22116499 Msa0912690:intron 50.0%
GGACCCTGTTCCAAAGCAAA+TGG - chr6_2:22116486-22116505 None:intergenic 50.0%
TCTGCATGACAGCTTCTACC+CGG + chr6_2:22116588-22116607 Msa0912690:intron 50.0%
TCAGCCACTAGCTAAACTGC+CGG - chr6_2:22116610-22116629 None:intergenic 50.0%
GCAGTTTAGCTAGTGGCTGA+AGG + chr6_2:22116610-22116629 Msa0912690:intron 50.0%
AGAGCTTGTGCAGAGAGCAA+GGG - chr6_2:22116660-22116679 None:intergenic 50.0%
TGGTGCCTATATCACCGAAC+AGG + chr6_2:22116979-22116998 Msa0912690:intron 50.0%
GGTGCCTATATCACCGAACA+GGG + chr6_2:22116980-22116999 Msa0912690:intron 50.0%
AAGGAGTGGTGTGCCTCAAA+AGG + chr6_2:22117548-22117567 Msa0912690:CDS 50.0%
AGGAGTGGTGTGCCTCAAAA+GGG + chr6_2:22117549-22117568 Msa0912690:CDS 50.0%
! TTGTAGCCGACTCCACTTAG+TGG + chr6_2:22117797-22117816 Msa0912690:intron 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr6_2:22117798-22117817 Msa0912690:intron 50.0%
CTTCTCCCACTAAGTGGAGT+CGG - chr6_2:22117806-22117825 None:intergenic 50.0%
TCCTTTGGGCAAGAAGACTC+AGG - chr6_2:22118016-22118035 None:intergenic 50.0%
CTTCTTCCTACTGTCCCAAG+TGG - chr6_2:22118398-22118417 None:intergenic 50.0%
TGAGACTAGGCCCCAAAAGA+TGG - chr6_2:22118554-22118573 None:intergenic 50.0%
TGCTGCGATTGAGCCGTTAT+GGG + chr6_2:22118784-22118803 Msa0912690:intron 50.0%
TCTGTGCCGCAATCCCATAA+CGG - chr6_2:22118800-22118819 None:intergenic 50.0%
TTGCGGCACAGATCAGTTAC+TGG + chr6_2:22118808-22118827 Msa0912690:intron 50.0%
AGATCAGTTACTGGCCACCA+TGG + chr6_2:22118817-22118836 Msa0912690:intron 50.0%
GGCAAGGACGTCATGCATTA+AGG + chr6_2:22118843-22118862 Msa0912690:intron 50.0%
GACGTCATGCATTAAGGTGC+AGG + chr6_2:22118849-22118868 Msa0912690:intron 50.0%
CATCCTGCTACATGTCATCC+CGG + chr6_2:22118980-22118999 Msa0912690:intron 50.0%
GTTGTCAATCCCAGACAACC+CGG - chr6_2:22119013-22119032 None:intergenic 50.0%
!! TTCTCTGGAACAACAGGCTC+CGG - chr6_2:22119221-22119240 None:intergenic 50.0%
GTTCCAGAGAATGAGCAGAG+GGG + chr6_2:22119230-22119249 Msa0912690:CDS 50.0%
TGGAGTGTACAAAGTGGGGA+AGG - chr6_2:22119333-22119352 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG + chr6_2:22119527-22119546 Msa0912690:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG + chr6_2:22119528-22119547 Msa0912690:intron 50.0%
GACTTGAACCCGTGACCTTA+CGG - chr6_2:22119539-22119558 None:intergenic 50.0%
TGGCCTCGATTGCAATCGCT+GGG + chr6_2:22114032-22114051 Msa0912690:intron 55.0%
TAGAGGGGGGCAACGAATTG+GGG - chr6_2:22116052-22116071 None:intergenic 55.0%
!! GCTTTGGAACAGGGTCCAGT+TGG + chr6_2:22116489-22116508 Msa0912690:intron 55.0%
CTACCCGGCAGTTTAGCTAG+TGG + chr6_2:22116603-22116622 Msa0912690:intron 55.0%
CAGCCACTAGCTAAACTGCC+GGG - chr6_2:22116609-22116628 None:intergenic 55.0%
GAGAGCTTGTGCAGAGAGCA+AGG - chr6_2:22116661-22116680 None:intergenic 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + chr6_2:22117438-22117457 Msa0912690:CDS 55.0%
GGAGTCGGCTACAAGCTACA+TGG - chr6_2:22117791-22117810 None:intergenic 55.0%
CGACTCCACTTAGTGGGAGA+AGG + chr6_2:22117804-22117823 Msa0912690:intron 55.0%
CCAAGCCTTCTCCCACTAAG+TGG - chr6_2:22117812-22117831 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG + chr6_2:22117809-22117828 Msa0912690:intron 55.0%
GCCTGAGTCTTCTTGCCCAA+AGG + chr6_2:22118012-22118031 Msa0912690:intron 55.0%
CGGGAGTCCCCTATGTTAAC+TGG - chr6_2:22118258-22118277 None:intergenic 55.0%
TAACATAGGGGACTCCCGCT+TGG + chr6_2:22118260-22118279 Msa0912690:intron 55.0%
AACATAGGGGACTCCCGCTT+GGG + chr6_2:22118261-22118280 Msa0912690:intron 55.0%
ACATAGGGGGCTGCCAGTTA+TGG + chr6_2:22118297-22118316 Msa0912690:intron 55.0%
GAACTCCCACTTGGGACAGT+AGG + chr6_2:22118389-22118408 Msa0912690:intron 55.0%
GTGCTGCGATTGAGCCGTTA+TGG + chr6_2:22118783-22118802 Msa0912690:intron 55.0%
CGGGATGACATGTAGCAGGA+TGG - chr6_2:22118982-22119001 None:intergenic 55.0%
ATGTCATCCCGGCTGTTGTC+CGG + chr6_2:22118991-22119010 Msa0912690:intron 55.0%
GGAACAACAGGCTCCGGAAT+AGG - chr6_2:22119215-22119234 None:intergenic 55.0%
GGGTGGTTGTGCATGTTGAC+CGG + chr6_2:22119250-22119269 Msa0912690:exon 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr6_2:22119540-22119559 Msa0912690:intron 55.0%
CATATGCAAGGTCCGGGAAG+GGG - chr6_2:22119624-22119643 None:intergenic 55.0%
GCATATGCAAGGTCCGGGAA+GGG - chr6_2:22119625-22119644 None:intergenic 55.0%
CTTCCCGGACCTTGCATATG+CGG + chr6_2:22119624-22119643 Msa0912690:intron 55.0%
TTCCCGGACCTTGCATATGC+GGG + chr6_2:22119625-22119644 Msa0912690:intron 55.0%
CTGAAGCTCCCGCATATGCA+AGG - chr6_2:22119636-22119655 None:intergenic 55.0%
GTGGCCTCGATTGCAATCGC+TGG + chr6_2:22114031-22114050 Msa0912690:intron 60.0%
GATATGGGACACTGCAGGGC+AGG + chr6_2:22115282-22115301 Msa0912690:intron 60.0%
TGTGCAGAGAGCAAGGGCCT+TGG - chr6_2:22116654-22116673 None:intergenic 60.0%
GGCGGGAATAGTCGAGTGGT+AGG + chr6_2:22117442-22117461 Msa0912690:intron 60.0%
AGTTACTGGCCACCATGGCG+AGG + chr6_2:22118822-22118841 Msa0912690:intron 60.0%
ATGACGTCCTTGCCTCGCCA+TGG - chr6_2:22118837-22118856 None:intergenic 60.0%
CAGCCGGGATGACATGTAGC+AGG - chr6_2:22118986-22119005 None:intergenic 60.0%
TGTCATCCCGGCTGTTGTCC+GGG + chr6_2:22118992-22119011 Msa0912690:intron 60.0%
AGACAACCCGGACAACAGCC+GGG - chr6_2:22119001-22119020 None:intergenic 60.0%
CAGACAACCCGGACAACAGC+CGG - chr6_2:22119002-22119021 None:intergenic 60.0%
GGCTGTTGTCCGGGTTGTCT+GGG + chr6_2:22119001-22119020 Msa0912690:intron 60.0%
CCACCCCTCTGCTCATTCTC+TGG - chr6_2:22119236-22119255 None:intergenic 60.0%
CCAGAGAATGAGCAGAGGGG+TGG + chr6_2:22119233-22119252 Msa0912690:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr6_2:22119609-22119628 Msa0912690:intron 60.0%
CGCATATGCAAGGTCCGGGA+AGG - chr6_2:22119626-22119645 None:intergenic 60.0%
CTCCCGCATATGCAAGGTCC+GGG - chr6_2:22119630-22119649 None:intergenic 60.0%
GCTCCCGCATATGCAAGGTC+CGG - chr6_2:22119631-22119650 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr6_2:22119641-22119660 Msa0912690:intron 60.0%
ACGTCCTTGCCTCGCCATGG+TGG - chr6_2:22118834-22118853 None:intergenic 65.0%
CGGCTGTTGTCCGGGTTGTC+TGG + chr6_2:22119000-22119019 Msa0912690:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr6_2:22119611-22119630 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr6_2:22119642-22119661 Msa0912690:intron 65.0%
CTGGCCACCATGGCGAGGCA+AGG + chr6_2:22118827-22118846 Msa0912690:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 22113092 22119744 22113092 ID=Msa0912690;Name=Msa0912690
chr6_2 mRNA 22113092 22119744 22113092 ID=Msa0912690-mRNA-1;Parent=Msa0912690;Name=Msa0912690-mRNA-1;_AED=0.12;_eAED=0.12;_QI=182|1|1|1|0.71|0.5|8|307|206
chr6_2 exon 22113092 22113326 22113092 ID=Msa0912690-mRNA-1:exon:4359;Parent=Msa0912690-mRNA-1
chr6_2 exon 22113442 22113468 22113442 ID=Msa0912690-mRNA-1:exon:4360;Parent=Msa0912690-mRNA-1
chr6_2 exon 22115069 22115168 22115069 ID=Msa0912690-mRNA-1:exon:4361;Parent=Msa0912690-mRNA-1
chr6_2 exon 22115283 22115429 22115283 ID=Msa0912690-mRNA-1:exon:4362;Parent=Msa0912690-mRNA-1
chr6_2 exon 22117379 22117459 22117379 ID=Msa0912690-mRNA-1:exon:4363;Parent=Msa0912690-mRNA-1
chr6_2 exon 22117530 22117675 22117530 ID=Msa0912690-mRNA-1:exon:4364;Parent=Msa0912690-mRNA-1
chr6_2 exon 22119202 22119515 22119202 ID=Msa0912690-mRNA-1:exon:4365;Parent=Msa0912690-mRNA-1
chr6_2 exon 22119685 22119744 22119685 ID=Msa0912690-mRNA-1:exon:4366;Parent=Msa0912690-mRNA-1
chr6_2 five_prime_UTR 22113092 22113273 22113092 ID=Msa0912690-mRNA-1:five_prime_utr;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22113274 22113326 22113274 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22113442 22113468 22113442 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22115069 22115168 22115069 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22115283 22115429 22115283 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22117379 22117459 22117379 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22117530 22117675 22117530 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 CDS 22119202 22119268 22119202 ID=Msa0912690-mRNA-1:cds;Parent=Msa0912690-mRNA-1
chr6_2 three_prime_UTR 22119269 22119515 22119269 ID=Msa0912690-mRNA-1:three_prime_utr;Parent=Msa0912690-mRNA-1
chr6_2 three_prime_UTR 22119685 22119744 22119685 ID=Msa0912690-mRNA-1:three_prime_utr;Parent=Msa0912690-mRNA-1
Gene Sequence

>Msa0912690

ATGGCCTTACGCAGAAGAACTTTACTCAAAGTTATCGTTCTTGGAGACAGTGGGGTTGGAAAAACTTCGTTGATGAATCAATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGACTTTGTAACCAAAGAATTGCAGATCGATGACCGACTAGTTACTCTACAAATATGGGACACTGCAGGGCAGGAGAGATTTCAAAGTCTTGGTGTTGCATTTTATAGAGGGGCCGATTGCTGTGTTCTCGTTTACGATGTTAATGTGATGAAGTCATTTGATACACTTGATAACTGGCACGAGGAGTTTCTGAAACAGGCAAACCCTTCTAATCCAAGCACTTTTCCATTTATATTGCTTGGAAACAAAGTTGATATTGATGGCGGGAATAGTCGAGTGGTTTCTGATAAGAAAGCAAAGGAGTGGTGTGCCTCAAAAGGGAACATTCCTTACTTTGAGACATCTGCAAAGGAAGACTTGAATGTTGATGCTGCATTCCTATGTATTGCCAAGACCGCATTAGCCAATGAACGTGAGCAAGACATATATTTTCAACCTATTCCGGAGCCTGTTGTTCCAGAGAATGAGCAGAGGGGTGGTTGTGCATGTTGA
Protein sequence

>Msa0912690

MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFILLGNKVDIDGGNSRVVSDKKAKEWCASKGNIPYFETSAKEDLNVDAAFLCIAKTALANEREQDIYFQPIPEPVVPENEQRGGCAC*