AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0946910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0946910 MtrunA17_Chr5g0410681 97.778 90 2 0 56 145 118 207 6.65e-58 182
Msa0946910 MtrunA17_Chr3g0136661 53.750 80 36 1 66 145 116 194 3.37e-21 87.0
Msa0946910 MtrunA17_Chr6g0452121 87.500 40 5 0 57 96 4 43 6.87e-19 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0946910 AT1G32220.1 61.240 129 46 2 19 145 75 201 3.79e-47 154
Msa0946910 AT5G10730.1 49.367 79 39 1 66 144 117 194 2.44e-19 82.4
Msa0946910 AT5G15910.2 50.649 77 37 1 68 144 63 138 7.04e-18 77.4
Msa0946910 AT5G15910.1 50.649 77 37 1 68 144 104 179 8.95e-18 77.8

Find 89 sgRNAs with CRISPR-Local

Find 720 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29219281 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29219691 None:intergenic
GGAAGTGTTAATTGGATTTC+AGG 0.162392 6_3:-29219683 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29220652 Msa0946910:three_prime_UTR
GTGACTCGATTGTGTGTTTA+AGG 0.185242 6_3:+29220614 Msa0946910:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29220274 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29208781 Msa0946910:CDS
TTCTGAAAGAATAGGGAATT+TGG 0.232650 6_3:-29219383 None:intergenic
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29219704 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29217699 Msa0946910:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29208562 Msa0946910:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29218700 Msa0946910:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29220356 Msa0946910:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29220105 Msa0946910:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29217766 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29218664 Msa0946910:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29220138 Msa0946910:three_prime_UTR
CTTAGAACCTCTCTCCTTTG+TGG 0.386335 6_3:+29219613 Msa0946910:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29208345 Msa0946910:five_prime_UTR
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29219280 None:intergenic
CACTCAGATTCTGAAAGAAT+AGG 0.389610 6_3:-29219391 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29220243 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29219992 Msa0946910:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29208563 Msa0946910:exon
GTGAATTTGCAGAGTATTGA+AGG 0.399588 6_3:+29208742 Msa0946910:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29218772 Msa0946910:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29219331 Msa0946910:CDS
ACTCAGATTCTGAAAGAATA+GGG 0.420667 6_3:-29219390 None:intergenic
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29207774 Msa0946910:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29220061 Msa0946910:three_prime_UTR
TGCTGAGATATGCACTGATT+TGG 0.434101 6_3:+29220638 Msa0946910:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29219590 None:intergenic
TCTTTCAGAATCTGAGTGAA+TGG 0.452610 6_3:+29219396 Msa0946910:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29208534 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29220302 Msa0946910:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29217787 None:intergenic
GAAGTGTTAATTGGATTTCA+GGG 0.471856 6_3:-29219682 None:intergenic
CATATTTCTGCTCCACTCCA+AGG 0.478058 6_3:-29219648 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29208334 Msa0946910:five_prime_UTR
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29208542 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29218682 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29220133 Msa0946910:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29219981 Msa0946910:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29208551 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29208564 Msa0946910:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29220487 Msa0946910:three_prime_UTR
ATTGAAGGTCTGACAAAGGT+TGG 0.527454 6_3:+29208757 Msa0946910:CDS
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29220495 Msa0946910:three_prime_UTR
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29220270 None:intergenic
GAACAAATGAGTAAGATTAA+CGG 0.549035 6_3:+29218730 Msa0946910:CDS
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29208518 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29219594 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29220091 Msa0946910:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29220062 Msa0946910:three_prime_UTR
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29220139 Msa0946910:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29208561 None:intergenic
GAGAGGTTCTAAGCACAAGA+AGG 0.561068 6_3:-29219603 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29208528 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29220058 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29219631 Msa0946910:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29218691 Msa0946910:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29220201 Msa0946910:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29220494 Msa0946910:three_prime_UTR
GAAGGTCTGACAAAGGTTGG+AGG 0.595901 6_3:+29208760 Msa0946910:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29217784 Msa0946910:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29219985 Msa0946910:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29220114 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29220076 Msa0946910:three_prime_UTR
AAGGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29208761 Msa0946910:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29220108 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29207782 Msa0946910:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29218707 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29218747 Msa0946910:CDS
ATATGCTGAATTTCATCATG+AGG 0.622047 6_3:+29220019 Msa0946910:three_prime_UTR
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29207815 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29220400 Msa0946910:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29220488 Msa0946910:three_prime_UTR
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29218708 None:intergenic
ACTGCTGCATCTTATGCAAG+AGG 0.648151 6_3:+29208369 Msa0946910:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29220386 Msa0946910:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29207803 Msa0946910:five_prime_UTR
GAGTATTGAAGGTCTGACAA+AGG 0.665643 6_3:+29208753 Msa0946910:CDS
AATGTCACCACAAAGGAGAG+AGG 0.667419 6_3:-29219620 None:intergenic
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29219636 Msa0946910:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29220285 Msa0946910:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29219627 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29218694 Msa0946910:CDS
AATGAGTAAGATTAACGGCG+AGG 0.694649 6_3:+29218735 Msa0946910:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29220328 Msa0946910:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29210503-29210522 None:intergenic 10.0%
!!! TAATATTTTGATATTGTATA+AGG + chr6_3:29212977-29212996 Msa0946910:intron 10.0%
!!! ATTAAACATAAATATTTTCA+AGG - chr6_3:29213474-29213493 None:intergenic 10.0%
!! TGTGAATATATATAATAATA+AGG + chr6_3:29214552-29214571 Msa0946910:intron 10.0%
!! TTAACATAGATATAAATATT+AGG - chr6_3:29217015-29217034 None:intergenic 10.0%
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29210503-29210522 None:intergenic 10.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29208896-29208915 Msa0946910:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29215482-29215501 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29215481-29215500 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29209668-29209687 Msa0946910:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29210223-29210242 None:intergenic 15.0%
!! TTCACATAGATATAAATATT+AGG - chr6_3:29210240-29210259 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG - chr6_3:29214431-29214450 None:intergenic 15.0%
!! AATATTAACTCAATATCTAT+TGG + chr6_3:29210626-29210645 Msa0946910:intron 15.0%
!!! AACTTAATATTTTGAATTGA+AGG - chr6_3:29212058-29212077 None:intergenic 15.0%
!! TATTGTATAAGGAATTAATT+TGG + chr6_3:29212988-29213007 Msa0946910:intron 15.0%
!! TAATTTATTTAATTGGAGAA+AGG + chr6_3:29213494-29213513 Msa0946910:intron 15.0%
!!! TAATTAAATCTGCTTTATTT+AGG - chr6_3:29213641-29213660 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG + chr6_3:29214431-29214450 Msa0946910:intron 15.0%
!! TATACATAGGTATAAATATT+AGG + chr6_3:29214814-29214833 Msa0946910:intron 15.0%
!! ATACATAGGTATAAATATTA+GGG + chr6_3:29214815-29214834 Msa0946910:intron 15.0%
!! TTAATATTATAAACAATGAG+CGG - chr6_3:29209668-29209687 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG + chr6_3:29215481-29215500 Msa0946910:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG + chr6_3:29215482-29215501 Msa0946910:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29215482-29215501 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29215481-29215500 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29209668-29209687 Msa0946910:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29210223-29210242 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29218141-29218160 Msa0946910:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29218543-29218562 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29220672-29220691 Msa0946910:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29207937-29207956 Msa0946910:intron 20.0%
!! AATAGCAATTTATAAATCTG+AGG - chr6_3:29208417-29208436 None:intergenic 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29208864-29208883 Msa0946910:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29208865-29208884 Msa0946910:intron 20.0%
!! TTTGAACATCAACAAAATTA+AGG - chr6_3:29209104-29209123 None:intergenic 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29215483-29215502 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29215222-29215241 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29215221-29215240 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29215188-29215207 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG - chr6_3:29215161-29215180 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29209894-29209913 Msa0946910:intron 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29210380-29210399 Msa0946910:intron 20.0%
!! AAAGTATACATTTGAATCAT+TGG + chr6_3:29210781-29210800 Msa0946910:intron 20.0%
!! GATGTCAAATATAAATGATT+TGG - chr6_3:29210923-29210942 None:intergenic 20.0%
!!! TATGAAATTTGTAAAAGTAC+AGG - chr6_3:29214084-29214103 None:intergenic 20.0%
!!! TGTACTTTTACAAATTTCAT+AGG + chr6_3:29210972-29210991 Msa0946910:intron 20.0%
!!! AATCAATTTTGGTACATATT+AGG + chr6_3:29211174-29211193 Msa0946910:intron 20.0%
!!! CATGTATAGATAAATTGTTT+TGG + chr6_3:29211220-29211239 Msa0946910:intron 20.0%
!! TACAAAATTCATGTATGAAT+TGG - chr6_3:29211391-29211410 None:intergenic 20.0%
!! ATGTATTTGACATATATGTA+GGG - chr6_3:29211452-29211471 None:intergenic 20.0%
!! TATGTATTTGACATATATGT+AGG - chr6_3:29211453-29211472 None:intergenic 20.0%
!! ATATGTCAAATACATATACA+AGG + chr6_3:29211457-29211476 Msa0946910:intron 20.0%
!! TATTGTATAATGCAAATTCT+AGG - chr6_3:29211520-29211539 None:intergenic 20.0%
!! ATTATACAATAATGACAAGT+GGG + chr6_3:29211529-29211548 Msa0946910:intron 20.0%
!! ATTTAACCAATATCCATATA+TGG + chr6_3:29211723-29211742 Msa0946910:intron 20.0%
!!! ATTAGTTTAGATTCTCTTAT+TGG + chr6_3:29211894-29211913 Msa0946910:intron 20.0%
!! TAATAAAAGTGACATGATTA+TGG - chr6_3:29211947-29211966 None:intergenic 20.0%
!! ATAAATTTAGAAGCAATGTT+TGG + chr6_3:29212247-29212266 Msa0946910:intron 20.0%
!! TAAATTTAGAAGCAATGTTT+GGG + chr6_3:29212248-29212267 Msa0946910:intron 20.0%
!!! ATTTGTTTTGAGTAAAATAG+TGG + chr6_3:29212471-29212490 Msa0946910:intron 20.0%
!!! TTTGTTTTGAGTAAAATAGT+GGG + chr6_3:29212472-29212491 Msa0946910:intron 20.0%
!! TATACTGTTAAAAGTTCTTA+TGG + chr6_3:29212595-29212614 Msa0946910:intron 20.0%
!! CAAATGAGTAGAATTAAAAT+TGG + chr6_3:29212770-29212789 Msa0946910:intron 20.0%
!!! TCAGATATGATTTTTGAATT+TGG + chr6_3:29213558-29213577 Msa0946910:intron 20.0%
!! GATGTCAAATATATATGATT+TGG + chr6_3:29214134-29214153 Msa0946910:intron 20.0%
!! AAAGTATACATTTGGATTAT+TGG - chr6_3:29214272-29214291 None:intergenic 20.0%
!!! TCAATATTGATTGGATATTA+GGG - chr6_3:29214490-29214509 None:intergenic 20.0%
!!! ATCAATATTGATTGGATATT+AGG - chr6_3:29214491-29214510 None:intergenic 20.0%
!! TACATAGGTATAAATATTAG+GGG + chr6_3:29214816-29214835 Msa0946910:intron 20.0%
!!! TATCTTATATTGACTTAGTT+CGG - chr6_3:29209894-29209913 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG + chr6_3:29215161-29215180 Msa0946910:intron 20.0%
!! ATTCGTTATTCAGTATATTT+CGG + chr6_3:29215188-29215207 Msa0946910:intron 20.0%
!! TATAAACATTGATCTATACA+AGG + chr6_3:29215221-29215240 Msa0946910:intron 20.0%
!! ATAAACATTGATCTATACAA+GGG + chr6_3:29215222-29215241 Msa0946910:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG + chr6_3:29215483-29215502 Msa0946910:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29215483-29215502 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29215222-29215241 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29215221-29215240 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29215188-29215207 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29209894-29209913 Msa0946910:intron 20.0%
!! AATATAACTGTAAAATTGCA+TGG - chr6_3:29216700-29216719 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29210380-29210399 Msa0946910:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29217427-29217446 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29217518-29217537 Msa0946910:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29217600-29217619 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29217601-29217620 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29217639-29217658 Msa0946910:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29217880-29217899 None:intergenic 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG + chr6_3:29217890-29217909 Msa0946910:intron 20.0%
!!! TTATGATTTTATGGTAAGAT+CGG + chr6_3:29217899-29217918 Msa0946910:intron 20.0%
!! GAGAATATAGAAGAAAATTA+AGG + chr6_3:29217970-29217989 Msa0946910:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29218244-29218263 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29218648-29218667 Msa0946910:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29219084-29219103 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29219084-29219103 Msa0946910:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29219113-29219132 Msa0946910:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29219153-29219172 Msa0946910:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29219154-29219173 Msa0946910:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29219423-29219442 None:intergenic 20.0%
!! TGTTGTACTAACAAAAAAAA+AGG + chr6_3:29219464-29219483 Msa0946910:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29219694-29219713 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29219911-29219930 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29207818-29207837 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29208078-29208097 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29208150-29208169 Msa0946910:intron 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29208455-29208474 Msa0946910:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29208671-29208690 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29208935-29208954 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29208972-29208991 Msa0946910:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29209053-29209072 Msa0946910:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29215606-29215625 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29215538-29215557 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29215537-29215556 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29209786-29209805 None:intergenic 25.0%
! AATATGACTGTAAAATTGCA+TGG - chr6_3:29215129-29215148 None:intergenic 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29215095-29215114 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29210347-29210366 Msa0946910:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29210381-29210400 Msa0946910:intron 25.0%
! ATACTTAATGTTCCATCAAA+CGG + chr6_3:29210420-29210439 Msa0946910:intron 25.0%
! ATTTATTCCAAATTACGATC+TGG + chr6_3:29211012-29211031 Msa0946910:intron 25.0%
!!! AATGATGTTGACTTTCATAT+AGG - chr6_3:29211050-29211069 None:intergenic 25.0%
! AATATCCTTGGATATCTTAA+AGG - chr6_3:29211125-29211144 None:intergenic 25.0%
!! TCGAACACTATAATCAATTT+TGG + chr6_3:29211163-29211182 Msa0946910:intron 25.0%
! CATTATACAATAATGACAAG+TGG + chr6_3:29211528-29211547 Msa0946910:intron 25.0%
! ATCATTATGCATGTTATGAT+TGG + chr6_3:29211974-29211993 Msa0946910:intron 25.0%
! TATATATGATATATAAGCCG+TGG + chr6_3:29212005-29212024 Msa0946910:intron 25.0%
!!! ATTTCGATATTAGTCTTGAA+GGG - chr6_3:29212104-29212123 None:intergenic 25.0%
! CTATATGATAGATTAGAGTA+AGG + chr6_3:29212276-29212295 Msa0946910:intron 25.0%
! AAAGTTGTATGAGATACAAT+TGG + chr6_3:29212321-29212340 Msa0946910:intron 25.0%
! TACTCAAAACTCAGTTATTT+AGG - chr6_3:29212359-29212378 None:intergenic 25.0%
! ATTACCTTCAACATTTGAAT+CGG - chr6_3:29212453-29212472 None:intergenic 25.0%
!! ATATCGATTATACATATCGA+CGG + chr6_3:29212869-29212888 Msa0946910:intron 25.0%
! TAACAATTGTTTGTTCAGTA+TGG - chr6_3:29213263-29213282 None:intergenic 25.0%
! TGATGTTTGATTGTTGTATT+AGG + chr6_3:29213290-29213309 Msa0946910:intron 25.0%
!! ATACAAGCGTTGTATTATTA+TGG + chr6_3:29213323-29213342 Msa0946910:intron 25.0%
! TGTTTCCAAAACAAATTACA+GGG - chr6_3:29213609-29213628 None:intergenic 25.0%
! TTGTTTCCAAAACAAATTAC+AGG - chr6_3:29213610-29213629 None:intergenic 25.0%
!! CATGTGTAGATAAATTGTTT+TGG - chr6_3:29213837-29213856 None:intergenic 25.0%
! ATTTGTACCAAAATTGATTG+TGG + chr6_3:29213884-29213903 Msa0946910:intron 25.0%
!!! AATGATGCTGACTTTAATAT+CGG + chr6_3:29214007-29214026 Msa0946910:intron 25.0%
! ATTTATTCCAAATTGCGATT+TGG - chr6_3:29214045-29214064 None:intergenic 25.0%
! TAGAAACAACAACTATTTGA+AGG - chr6_3:29214109-29214128 None:intergenic 25.0%
! TGATACTATTCTAGTAGATA+AGG - chr6_3:29214373-29214392 None:intergenic 25.0%
! CAAACTCAATCAATATTGAT+TGG - chr6_3:29214499-29214518 None:intergenic 25.0%
!! CAATCAATATTGATTGAGTT+TGG + chr6_3:29214497-29214516 Msa0946910:intron 25.0%
! AGAATAGATAGTTCATGTAA+TGG + chr6_3:29214620-29214639 Msa0946910:intron 25.0%
! TTCATATTAAAGCTTGACTA+TGG - chr6_3:29214708-29214727 None:intergenic 25.0%
!! AGTCAAGCTTTAATATGAAT+TGG + chr6_3:29214709-29214728 Msa0946910:intron 25.0%
!! GTCAAGCTTTAATATGAATT+GGG + chr6_3:29214710-29214729 Msa0946910:intron 25.0%
! GAGATATTAAGTCTATACAT+AGG + chr6_3:29214801-29214820 Msa0946910:intron 25.0%
! ATTAGGGGTAATATTTATAC+TGG + chr6_3:29214831-29214850 Msa0946910:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG + chr6_3:29215095-29215114 Msa0946910:intron 25.0%
! AATATGACTGTAAAATTGCA+TGG + chr6_3:29215129-29215148 Msa0946910:intron 25.0%
! AAAATTACTAAACTCGTTGT+TGG + chr6_3:29215537-29215556 Msa0946910:intron 25.0%
! AAATTACTAAACTCGTTGTT+GGG + chr6_3:29215538-29215557 Msa0946910:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG + chr6_3:29215606-29215625 Msa0946910:intron 25.0%
!! AATTTTCGATTTTCATTCCT+TGG - chr6_3:29215865-29215884 None:intergenic 25.0%
!!! GAATTTTGATTTTCTTTCCT+TGG + chr6_3:29215992-29216011 Msa0946910:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29215606-29215625 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29215538-29215557 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29215537-29215556 None:intergenic 25.0%
! TACAGTTATATTTCATCAAG+AGG + chr6_3:29216708-29216727 Msa0946910:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29215095-29215114 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29210347-29210366 Msa0946910:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29210381-29210400 Msa0946910:intron 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr6_3:29217387-29217406 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29217435-29217454 Msa0946910:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29217613-29217632 Msa0946910:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29217614-29217633 Msa0946910:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29217657-29217676 Msa0946910:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29217699-29217718 Msa0946910:intron 25.0%
!! TAAAAATTTTGTGCCAGTTT+TGG + chr6_3:29217753-29217772 Msa0946910:CDS 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29218008-29218027 Msa0946910:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+TGG + chr6_3:29218436-29218455 Msa0946910:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29218538-29218557 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29218647-29218666 Msa0946910:CDS 25.0%
! GAACAAATGAGTAAGATTAA+CGG + chr6_3:29218730-29218749 Msa0946910:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29218901-29218920 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29218978-29218997 Msa0946910:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29219080-29219099 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29219283-29219302 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29219284-29219303 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29219707-29219726 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29219773-29219792 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29219867-29219886 Msa0946910:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29219868-29219887 Msa0946910:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29220460-29220479 Msa0946910:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29207739-29207758 Msa0946910:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29207774-29207793 Msa0946910:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29207774-29207793 Msa0946910:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29207914-29207933 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29207965-29207984 Msa0946910:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29208068-29208087 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29208073-29208092 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29208179-29208198 Msa0946910:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29208293-29208312 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29208309-29208328 Msa0946910:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29208319-29208338 Msa0946910:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29208334-29208353 Msa0946910:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29208345-29208364 Msa0946910:five_prime_UTR 30.0%
CCTGATCATAAATCAATAGA+GGG - chr6_3:29208450-29208469 None:intergenic 30.0%
TCCTGATCATAAATCAATAG+AGG - chr6_3:29208451-29208470 None:intergenic 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29208479-29208498 Msa0946910:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29208483-29208502 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29208485-29208504 Msa0946910:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29208682-29208701 Msa0946910:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29208795-29208814 Msa0946910:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29208809-29208828 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29208936-29208955 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29208934-29208953 Msa0946910:intron 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr6_3:29209123-29209142 Msa0946910:intron 30.0%
! GAATTTCGATTTTCTTTCCT+TGG + chr6_3:29209217-29209236 Msa0946910:intron 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29215302-29215321 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29215297-29215316 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29209792-29209811 Msa0946910:intron 30.0%
TTCAGTATATTTCGGAATCA+AGG - chr6_3:29215196-29215215 None:intergenic 30.0%
!! TATATTGACTTAGTTCGGTA+TGG + chr6_3:29209899-29209918 Msa0946910:intron 30.0%
TACAGTCATATTTCATCAAG+AGG + chr6_3:29209933-29209952 Msa0946910:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29216736-29216755 Msa0946910:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29215006-29215025 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29214990-29215009 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29210063-29210082 Msa0946910:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29210188-29210207 Msa0946910:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29210313-29210332 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29210314-29210333 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29210345-29210364 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29210346-29210365 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29210382-29210401 Msa0946910:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29210561-29210580 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29210562-29210581 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29210562-29210581 Msa0946910:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29210563-29210582 Msa0946910:intron 30.0%
AGTATATCCAGATCGTAATT+TGG - chr6_3:29211022-29211041 None:intergenic 30.0%
! TATGGATTGTTTCTTGAACA+TGG - chr6_3:29211100-29211119 None:intergenic 30.0%
TTGGATATCTTAAAGGACTA+TGG - chr6_3:29211118-29211137 None:intergenic 30.0%
!! ATAGTCCTTTAAGATATCCA+AGG + chr6_3:29211117-29211136 Msa0946910:intron 30.0%
ATATCCAAGGATATTCTTGA+AGG + chr6_3:29211130-29211149 Msa0946910:intron 30.0%
AATACCTTCAAGAATATCCT+TGG - chr6_3:29211137-29211156 None:intergenic 30.0%
TTATCTATACATGTGAGACA+TGG - chr6_3:29211213-29211232 None:intergenic 30.0%
AAAGAAATCTTGTGCACATA+AGG - chr6_3:29211303-29211322 None:intergenic 30.0%
! ATAATGCAAATTCTAGGAGA+TGG - chr6_3:29211514-29211533 None:intergenic 30.0%
AAGATGTGATTGATTGTAGA+AGG - chr6_3:29211623-29211642 None:intergenic 30.0%
CACAAACCATATATGGATAT+TGG - chr6_3:29211732-29211751 None:intergenic 30.0%
!! CATTTCGATATTAGTCTTGA+AGG - chr6_3:29212105-29212124 None:intergenic 30.0%
AGACTAATATCGAAATGTGT+AGG + chr6_3:29212108-29212127 Msa0946910:intron 30.0%
CTTTCTATACTAGTAAGTTG+CGG + chr6_3:29212151-29212170 Msa0946910:intron 30.0%
AGAATAACACTTGGGTAAAT+TGG - chr6_3:29212186-29212205 None:intergenic 30.0%
!! TTACCCAAGTGTTATTCTTT+TGG + chr6_3:29212188-29212207 Msa0946910:intron 30.0%
!! TACCCAAGTGTTATTCTTTT+GGG + chr6_3:29212189-29212208 Msa0946910:intron 30.0%
AACCCAAAAGAATAACACTT+GGG - chr6_3:29212194-29212213 None:intergenic 30.0%
AAACCCAAAAGAATAACACT+TGG - chr6_3:29212195-29212214 None:intergenic 30.0%
TTGTATGAGATACAATTGGA+AGG + chr6_3:29212325-29212344 Msa0946910:intron 30.0%
CAAAACTCAGTTATTTAGGT+AGG - chr6_3:29212355-29212374 None:intergenic 30.0%
ACTTAAAGCAAGGTGAAATA+TGG + chr6_3:29212391-29212410 Msa0946910:intron 30.0%
!! TCATTGGAAGATTTTCTAGT+GGG - chr6_3:29212424-29212443 None:intergenic 30.0%
TTTGAATCGGAAAATCTCAT+TGG - chr6_3:29212440-29212459 None:intergenic 30.0%
! TTTTCCGATTCAAATGTTGA+AGG + chr6_3:29212446-29212465 Msa0946910:intron 30.0%
TCAGAAAAGAGTTTCTGAAT+TGG + chr6_3:29212630-29212649 Msa0946910:intron 30.0%
! TATCGATTATACATATCGAC+GGG + chr6_3:29212870-29212889 Msa0946910:intron 30.0%
GATGATATCATTCGTTCAAT+AGG + chr6_3:29213149-29213168 Msa0946910:intron 30.0%
AATACAACGCTTGTATAGTT+AGG - chr6_3:29213319-29213338 None:intergenic 30.0%
!!! TTTAGCCCTGTAATTTGTTT+TGG + chr6_3:29213601-29213620 Msa0946910:intron 30.0%
ATAAAAATCTTGTGCACACA+AGG + chr6_3:29213754-29213773 Msa0946910:intron 30.0%
AACACTTTCAAGAATATCCA+TGG + chr6_3:29213920-29213939 Msa0946910:intron 30.0%
AATATCCATGGATGTCTTAA+AGG + chr6_3:29213932-29213951 Msa0946910:intron 30.0%
AGTATATCCAAATCGCAATT+TGG + chr6_3:29214035-29214054 Msa0946910:intron 30.0%
! TTTGGAATAAATGCTATGCT+TGG + chr6_3:29214053-29214072 Msa0946910:intron 30.0%
! GAAGTGTCAAAGTATACATT+TGG - chr6_3:29210773-29210792 None:intergenic 30.0%
! ACACTTCAATTTCTTTTCGA+TGG + chr6_3:29214293-29214312 Msa0946910:intron 30.0%
TAAGGAACTATTTCCTATGT+TGG - chr6_3:29214355-29214374 None:intergenic 30.0%
CATACTATGTAGTATTCTCA+CGG - chr6_3:29214866-29214885 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG - chr6_3:29210063-29210082 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG + chr6_3:29214990-29215009 Msa0946910:intron 30.0%
TAAAAGGATAACCATAACGT+TGG + chr6_3:29215006-29215025 Msa0946910:intron 30.0%
AGATATATCTCCTGTTTATG+AGG - chr6_3:29216736-29216755 None:intergenic 30.0%
TACAGTCATATTTCATCAAG+AGG - chr6_3:29209933-29209952 None:intergenic 30.0%
TTCAGTATATTTCGGAATCA+AGG + chr6_3:29215196-29215215 Msa0946910:intron 30.0%
CAATAAAGATATCGAGACAA+AGG + chr6_3:29215268-29215287 Msa0946910:intron 30.0%
TGTACACATGAGTATTATCA+TGG + chr6_3:29215297-29215316 Msa0946910:intron 30.0%
ACATGAGTATTATCATGGAA+AGG + chr6_3:29215302-29215321 Msa0946910:intron 30.0%
CGAAAAATCGAATAGAAGAA+TGG - chr6_3:29215904-29215923 None:intergenic 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29215302-29215321 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29215297-29215316 None:intergenic 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29216736-29216755 Msa0946910:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29215006-29215025 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29214990-29215009 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29210063-29210082 Msa0946910:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29210188-29210207 Msa0946910:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29210313-29210332 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29210314-29210333 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29210345-29210364 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29210346-29210365 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29210382-29210401 Msa0946910:intron 30.0%
! AGAATAGTTAGTCTGTTTGA+TGG - chr6_3:29217210-29217229 None:intergenic 30.0%
TCAAACAGACTAACTATTCT+AGG + chr6_3:29217210-29217229 Msa0946910:intron 30.0%
CAAACAGACTAACTATTCTA+GGG + chr6_3:29217211-29217230 Msa0946910:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29210561-29210580 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29210562-29210581 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29210562-29210581 Msa0946910:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29210563-29210582 Msa0946910:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr6_3:29217389-29217408 Msa0946910:intron 30.0%
TTAATTATGTTGTCTTCCTC+AGG - chr6_3:29217499-29217518 None:intergenic 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29217544-29217563 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29217543-29217562 Msa0946910:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29217544-29217563 Msa0946910:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29217618-29217637 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29217656-29217675 Msa0946910:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29217658-29217677 Msa0946910:intron 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29217784-29217803 Msa0946910:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29217790-29217809 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29217797-29217816 Msa0946910:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29217827-29217846 None:intergenic 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29218282-29218301 Msa0946910:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29218283-29218302 Msa0946910:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29218339-29218358 Msa0946910:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29218413-29218432 None:intergenic 30.0%
! GAGATTTTGTTAAAATGGTC+AGG + chr6_3:29218441-29218460 Msa0946910:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29218593-29218612 Msa0946910:intron 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29218984-29219003 Msa0946910:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29219088-29219107 Msa0946910:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29219318-29219337 Msa0946910:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29219319-29219338 Msa0946910:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29219320-29219339 Msa0946910:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29219354-29219373 Msa0946910:CDS 30.0%
! TTCTGAAAGAATAGGGAATT+TGG - chr6_3:29219386-29219405 None:intergenic 30.0%
! ACTCAGATTCTGAAAGAATA+GGG - chr6_3:29219393-29219412 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29219565-29219584 Msa0946910:three_prime_UTR 30.0%
! GAAGTGTTAATTGGATTTCA+GGG - chr6_3:29219685-29219704 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29219697-29219716 Msa0946910:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29219932-29219951 Msa0946910:intron 30.0%
GTATGGTTAATTTATCACTC+TGG + chr6_3:29219949-29219968 Msa0946910:intron 30.0%
ATATGCTGAATTTCATCATG+AGG + chr6_3:29220019-29220038 Msa0946910:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29220273-29220292 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29220277-29220296 None:intergenic 30.0%
GCAGTTATCACCAACAATTT+CGG - chr6_3:29207978-29207997 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29208088-29208107 Msa0946910:intron 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29208155-29208174 Msa0946910:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29208178-29208197 Msa0946910:intron 35.0%
!! CCCTCTATTGATTTATGATC+AGG + chr6_3:29208447-29208466 Msa0946910:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29208545-29208564 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29208563-29208582 Msa0946910:exon 35.0%
!! GTGAATTTGCAGAGTATTGA+AGG + chr6_3:29208742-29208761 Msa0946910:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29208849-29208868 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29209159-29209178 Msa0946910:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29209237-29209256 None:intergenic 35.0%
ACATGAATCAGTGATACGAT+TGG + chr6_3:29209255-29209274 Msa0946910:intron 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29209283-29209302 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29209479-29209498 Msa0946910:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29209480-29209499 Msa0946910:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29215337-29215356 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29216739-29216758 Msa0946910:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29216740-29216759 Msa0946910:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29215037-29215056 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29215014-29215033 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29215013-29215032 None:intergenic 35.0%
AGAATAGTTAGTCCGTTTGA+TGG - chr6_3:29210435-29210454 None:intergenic 35.0%
!! TCAAACGGACTAACTATTCT+AGG + chr6_3:29210435-29210454 Msa0946910:intron 35.0%
!! CAAACGGACTAACTATTCTA+GGG + chr6_3:29210436-29210455 Msa0946910:intron 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29210556-29210575 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29210554-29210573 Msa0946910:intron 35.0%
AGATACTCTACTAGCAGATA+AGG + chr6_3:29210680-29210699 Msa0946910:intron 35.0%
TAAGGAACTCTTTCCTATGT+TGG + chr6_3:29210698-29210717 Msa0946910:intron 35.0%
TTTCGATAGAAGATCGAAAG+TGG - chr6_3:29210746-29210765 None:intergenic 35.0%
! AATCTCGTCTGAGGTAAAAT+TGG - chr6_3:29210842-29210861 None:intergenic 35.0%
TTTACCTCAGACGAGATTAA+TGG + chr6_3:29210844-29210863 Msa0946910:intron 35.0%
AATATGTGTTTCTTGCGTTG+TGG - chr6_3:29210873-29210892 None:intergenic 35.0%
! TATTAGTTTGGTGGAGTATG+TGG - chr6_3:29213796-29213815 None:intergenic 35.0%
!! GAGCATTGATATTAGTTTGG+TGG - chr6_3:29213787-29213806 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG - chr6_3:29213784-29213803 None:intergenic 35.0%
! TATACCTTTCTAGCATCCTT+TGG + chr6_3:29211416-29211435 Msa0946910:intron 35.0%
TAATCCAAAGGATGCTAGAA+AGG - chr6_3:29211423-29211442 None:intergenic 35.0%
TTTCTTGTAGAAAGCTGACA+TGG - chr6_3:29211666-29211685 None:intergenic 35.0%
TCTCATGAGTCATACTCATT+TGG + chr6_3:29211697-29211716 Msa0946910:intron 35.0%
CCATGTACACAAACCATATA+TGG - chr6_3:29211739-29211758 None:intergenic 35.0%
! CCATATATGGTTTGTGTACA+TGG + chr6_3:29211736-29211755 Msa0946910:intron 35.0%
GGATTCTTTATAAGATCCCA+TGG + chr6_3:29211757-29211776 Msa0946910:intron 35.0%
TTAGCCATTTCTCAAAGTTC+AGG + chr6_3:29211783-29211802 Msa0946910:intron 35.0%
!!! CTTGAAGGGTGTTAAACTTT+TGG - chr6_3:29212090-29212109 None:intergenic 35.0%
! CTCATTGGAAGATTTTCTAG+TGG - chr6_3:29212425-29212444 None:intergenic 35.0%
! CGTATCATGTTTTATGTGCA+TGG + chr6_3:29212796-29212815 Msa0946910:intron 35.0%
TGTCAATACTTCACCAGAAA+CGG - chr6_3:29212850-29212869 None:intergenic 35.0%
GTTTGTTTAGCATGAACAAC+CGG - chr6_3:29213448-29213467 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG + chr6_3:29213784-29213803 Msa0946910:intron 35.0%
!! GAGCATTGATATTAGTTTGG+TGG + chr6_3:29213787-29213806 Msa0946910:intron 35.0%
! TATTAGTTTGGTGGAGTATG+TGG + chr6_3:29213796-29213815 Msa0946910:intron 35.0%
TTATCTACACATGTGAGACA+TGG + chr6_3:29213844-29213863 Msa0946910:intron 35.0%
! TCGAACACCACAATCAATTT+TGG - chr6_3:29213894-29213913 None:intergenic 35.0%
!! TTAGTCCTTTAAGACATCCA+TGG - chr6_3:29213940-29213959 None:intergenic 35.0%
ATGGATGTCTTAAAGGACTA+AGG + chr6_3:29213939-29213958 Msa0946910:intron 35.0%
AAACCAATTTCACCTCAGAT+GGG - chr6_3:29214219-29214238 None:intergenic 35.0%
TAAACCAATTTCACCTCAGA+TGG - chr6_3:29214220-29214239 None:intergenic 35.0%
GAACTATTTCCTATGTTGGT+AGG - chr6_3:29214351-29214370 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG + chr6_3:29215013-29215032 Msa0946910:intron 35.0%
! TAACCATAACGTTGGTTGAT+GGG + chr6_3:29215014-29215033 Msa0946910:intron 35.0%
TACTTGATGAATCATGCTGA+GGG + chr6_3:29215037-29215056 Msa0946910:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG - chr6_3:29216740-29216759 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG - chr6_3:29216739-29216758 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG - chr6_3:29216674-29216693 None:intergenic 35.0%
GGTGACAATATCTATGTCTT+GGG + chr6_3:29215243-29215262 Msa0946910:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG + chr6_3:29215337-29215356 Msa0946910:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG - chr6_3:29209480-29209499 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG - chr6_3:29209479-29209498 None:intergenic 35.0%
CTGAATTTCGTAATGATCCA+AGG + chr6_3:29215845-29215864 Msa0946910:intron 35.0%
! ATCTTTCGATTTTCCTTCAG+TGG - chr6_3:29209148-29209167 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29209159-29209178 Msa0946910:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29209237-29209256 None:intergenic 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29209283-29209302 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29209479-29209498 Msa0946910:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29209480-29209499 Msa0946910:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29215337-29215356 None:intergenic 35.0%
TTCAGTATATTTCGGAATCG+AGG - chr6_3:29216633-29216652 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG + chr6_3:29216674-29216693 Msa0946910:intron 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29216739-29216758 Msa0946910:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29216740-29216759 Msa0946910:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29215037-29215056 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29215014-29215033 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29215013-29215032 None:intergenic 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29210556-29210575 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29210554-29210573 Msa0946910:intron 35.0%
!! TGGTATATCTGTTTTTCCTG+AGG + chr6_3:29217480-29217499 Msa0946910:intron 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29217528-29217547 Msa0946910:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29217708-29217727 Msa0946910:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29217711-29217730 Msa0946910:intron 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29217769-29217788 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29218054-29218073 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29218058-29218077 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29218466-29218485 Msa0946910:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29218511-29218530 Msa0946910:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29218512-29218531 Msa0946910:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29218638-29218657 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29218772-29218791 Msa0946910:CDS 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29218858-29218877 Msa0946910:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29219055-29219074 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29219127-29219146 Msa0946910:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29219322-29219341 None:intergenic 35.0%
! CACTCAGATTCTGAAAGAAT+AGG - chr6_3:29219394-29219413 None:intergenic 35.0%
TCTTTCAGAATCTGAGTGAA+TGG + chr6_3:29219396-29219415 Msa0946910:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29219597-29219616 None:intergenic 35.0%
!! GGAAGTGTTAATTGGATTTC+AGG - chr6_3:29219686-29219705 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29220091-29220110 Msa0946910:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29220317-29220336 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29220328-29220347 Msa0946910:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29220386-29220405 Msa0946910:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29220438-29220457 Msa0946910:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29220451-29220470 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29220487-29220506 Msa0946910:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29220488-29220507 Msa0946910:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29220652-29220671 Msa0946910:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29207782-29207801 Msa0946910:five_prime_UTR 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29208018-29208037 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29208554-29208573 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29208564-29208583 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29208562-29208581 Msa0946910:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29208564-29208583 Msa0946910:exon 40.0%
!! GAGTATTGAAGGTCTGACAA+AGG + chr6_3:29208753-29208772 Msa0946910:CDS 40.0%
ATTGAAGGTCTGACAAAGGT+TGG + chr6_3:29208757-29208776 Msa0946910:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29208781-29208800 Msa0946910:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29208835-29208854 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29208997-29209016 Msa0946910:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29209000-29209019 Msa0946910:intron 40.0%
! CGATTCTAAAAAAGCAGCCT+CGG - chr6_3:29209073-29209092 None:intergenic 40.0%
!! CTTCAGTGCCACTGTAATTT+TGG - chr6_3:29209134-29209153 None:intergenic 40.0%
! CAAAATTACAGTGGCACTGA+AGG + chr6_3:29209132-29209151 Msa0946910:intron 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29215671-29215690 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29209387-29209406 Msa0946910:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29209388-29209407 Msa0946910:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29215621-29215640 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29209609-29209628 Msa0946910:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29215428-29215447 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29215336-29215355 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29209811-29209830 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29215080-29215099 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29215036-29215055 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29210191-29210210 Msa0946910:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29210282-29210301 None:intergenic 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG - chr6_3:29214448-29214467 None:intergenic 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG - chr6_3:29214447-29214466 None:intergenic 40.0%
TGTTAGCATCAAGCACACTA+TGG + chr6_3:29210654-29210673 Msa0946910:intron 40.0%
GAACTCTTTCCTATGTTGGT+AGG + chr6_3:29210702-29210721 Msa0946910:intron 40.0%
GAAGTAAGACCTACCAACAT+AGG - chr6_3:29210714-29210733 None:intergenic 40.0%
GATTCCATTAATCTCGTCTG+AGG - chr6_3:29210851-29210870 None:intergenic 40.0%
GTGCACATAAGGAGATTAGT+GGG - chr6_3:29211292-29211311 None:intergenic 40.0%
TGTGCACATAAGGAGATTAG+TGG - chr6_3:29211293-29211312 None:intergenic 40.0%
GTAGGGTTTCGTTAATCCAA+AGG - chr6_3:29211435-29211454 None:intergenic 40.0%
TTGTAGAAAGCTGACATGGA+TGG - chr6_3:29211662-29211681 None:intergenic 40.0%
! ATGGCCTGAACTTTGAGAAA+TGG - chr6_3:29211790-29211809 None:intergenic 40.0%
ACTTCCTAGAAGGTCGTAAA+TGG - chr6_3:29211809-29211828 None:intergenic 40.0%
! ACGACCTTCTAGGAAGTAAT+AGG + chr6_3:29211812-29211831 Msa0946910:intron 40.0%
! CGACCTTCTAGGAAGTAATA+GGG + chr6_3:29211813-29211832 Msa0946910:intron 40.0%
ATGATATATAAGCCGTGGTG+AGG + chr6_3:29212010-29212029 Msa0946910:intron 40.0%
TATACTAGTAAGTTGCGGTG+CGG + chr6_3:29212156-29212175 Msa0946910:intron 40.0%
! ACAACGCTTATCAGAAGCAT+TGG + chr6_3:29212745-29212764 Msa0946910:intron 40.0%
!! CAACGCTTATCAGAAGCATT+GGG + chr6_3:29212746-29212765 Msa0946910:intron 40.0%
GATGTTTCAGAAACCGTTTC+TGG + chr6_3:29212834-29212853 Msa0946910:intron 40.0%
CTTTGATGCTTCACCAGAAT+CGG - chr6_3:29213230-29213249 None:intergenic 40.0%
GTTTGTTCAGTATGGACAAC+CGG - chr6_3:29213255-29213274 None:intergenic 40.0%
TGAGCTTCAATATCCGAATC+TGG + chr6_3:29213407-29213426 Msa0946910:intron 40.0%
CTATGATGCTTCACCAGATT+CGG - chr6_3:29213423-29213442 None:intergenic 40.0%
TTTCGATGGAAGATCGAAAG+TGG + chr6_3:29214307-29214326 Msa0946910:intron 40.0%
GAAGTGTAACCTACCAACAT+AGG + chr6_3:29214339-29214358 Msa0946910:intron 40.0%
ACTAGAATAGTATCATGCCC+AGG + chr6_3:29214378-29214397 Msa0946910:intron 40.0%
CTAGAATAGTATCATGCCCA+GGG + chr6_3:29214379-29214398 Msa0946910:intron 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG + chr6_3:29214447-29214466 Msa0946910:intron 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG + chr6_3:29214448-29214467 Msa0946910:intron 40.0%
TATCAATGACCCATGAGATG+CGG - chr6_3:29214779-29214798 None:intergenic 40.0%
CTATGTAGTATTCTCACGGT+GGG - chr6_3:29214862-29214881 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+TGG - chr6_3:29210191-29210210 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG + chr6_3:29215036-29215055 Msa0946910:intron 40.0%
ATTTGTCCCTCCTCATAAAC+AGG + chr6_3:29215080-29215099 Msa0946910:intron 40.0%
GGGTGACAATATCTATGTCT+TGG + chr6_3:29215242-29215261 Msa0946910:intron 40.0%
CACTTGACATTCTTGTCACT+TGG + chr6_3:29215336-29215355 Msa0946910:intron 40.0%
CAACGTGACTAGAACCTATA+GGG + chr6_3:29215428-29215447 Msa0946910:intron 40.0%
TTCTTTGTGTGTGACCCTAT+AGG - chr6_3:29209609-29209628 None:intergenic 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG + chr6_3:29215621-29215640 Msa0946910:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG - chr6_3:29209388-29209407 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG - chr6_3:29209387-29209406 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG + chr6_3:29215671-29215690 Msa0946910:intron 40.0%
TCGATTGTTACCTTGAACTG+TGG - chr6_3:29215810-29215829 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29215671-29215690 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29209387-29209406 Msa0946910:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29209388-29209407 Msa0946910:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29215621-29215640 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29209609-29209628 Msa0946910:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29215428-29215447 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29215336-29215355 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29209811-29209830 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29215080-29215099 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29215036-29215055 None:intergenic 40.0%
AAGCACTTGAGTTCACATCT+AGG + chr6_3:29216866-29216885 Msa0946910:intron 40.0%
AGCACTTGAGTTCACATCTA+GGG + chr6_3:29216867-29216886 Msa0946910:intron 40.0%
TTCACATCTAGGGATCATAG+TGG + chr6_3:29216877-29216896 Msa0946910:intron 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29210191-29210210 Msa0946910:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29210282-29210301 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29217466-29217485 None:intergenic 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29217665-29217684 Msa0946910:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29217666-29217685 Msa0946910:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29218286-29218305 Msa0946910:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29218476-29218495 Msa0946910:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29218487-29218506 Msa0946910:intron 40.0%
AATGAGTAAGATTAACGGCG+AGG + chr6_3:29218735-29218754 Msa0946910:CDS 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29218851-29218870 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29219270-29219289 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29219593-29219612 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29219871-29219890 Msa0946910:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29219881-29219900 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29219981-29220000 Msa0946910:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29220041-29220060 Msa0946910:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29220061-29220080 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29220061-29220080 Msa0946910:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29220062-29220081 Msa0946910:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29220105-29220124 Msa0946910:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29220117-29220136 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29220114-29220133 Msa0946910:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29220133-29220152 Msa0946910:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29220138-29220157 Msa0946910:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29220139-29220158 Msa0946910:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29220285-29220304 Msa0946910:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29220400-29220419 Msa0946910:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29220426-29220445 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29220432-29220451 None:intergenic 40.0%
GTGACTCGATTGTGTGTTTA+AGG + chr6_3:29220614-29220633 Msa0946910:three_prime_UTR 40.0%
!! TGCTGAGATATGCACTGATT+TGG + chr6_3:29220638-29220657 Msa0946910:three_prime_UTR 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29208189-29208208 Msa0946910:intron 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29208521-29208540 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29208531-29208550 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29208537-29208556 None:intergenic 45.0%
AAGGTCTGACAAAGGTTGGA+GGG + chr6_3:29208761-29208780 Msa0946910:CDS 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29209335-29209354 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29209351-29209370 Msa0946910:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29209389-29209408 Msa0946910:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29215427-29215446 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29209624-29209643 Msa0946910:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29209812-29209831 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29210034-29210053 Msa0946910:intron 45.0%
AAGCACTTGAGTCCACATCT+AGG + chr6_3:29210091-29210110 Msa0946910:intron 45.0%
AGCACTTGAGTCCACATCTA+GGG + chr6_3:29210092-29210111 Msa0946910:intron 45.0%
TCCACATCTAGGGATCATAG+TGG + chr6_3:29210102-29210121 Msa0946910:intron 45.0%
ACCACTATGATCCCTAGATG+TGG - chr6_3:29214948-29214967 None:intergenic 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29210109-29210128 Msa0946910:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29210192-29210211 Msa0946910:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29210391-29210410 None:intergenic 45.0%
TAGTGCTAGTGGGAGATTGT+TGG - chr6_3:29214458-29214477 None:intergenic 45.0%
GAGAAATGGCTAAACGCCAT+GGG - chr6_3:29211776-29211795 None:intergenic 45.0%
TGAGAAATGGCTAAACGCCA+TGG - chr6_3:29211777-29211796 None:intergenic 45.0%
GAGCCCTATTACTTCCTAGA+AGG - chr6_3:29211819-29211838 None:intergenic 45.0%
GTAATAGGGCTCATGACGTT+AGG + chr6_3:29211827-29211846 Msa0946910:intron 45.0%
TCATGACGTTAGGATAGTCC+TGG + chr6_3:29211837-29211856 Msa0946910:intron 45.0%
AGTTTGATCTCACCTCACCA+CGG - chr6_3:29212025-29212044 None:intergenic 45.0%
! AGTATAGAAAGTGCACCTCG+CGG - chr6_3:29212142-29212161 None:intergenic 45.0%
CATATCGACGGGAACATGAT+TGG + chr6_3:29212881-29212900 Msa0946910:intron 45.0%
!! TGAGCTTCGAATACCGATTC+TGG + chr6_3:29213214-29213233 Msa0946910:intron 45.0%
! CTGGTGAAGCATCAAAGATC+CGG + chr6_3:29213233-29213252 Msa0946910:intron 45.0%
! CTGGTGAAGCATCATAGATC+CGG + chr6_3:29213426-29213445 Msa0946910:intron 45.0%
TGTGCACACAAGGAGAATAG+TGG + chr6_3:29213764-29213783 Msa0946910:intron 45.0%
GTGCACACAAGGAGAATAGT+GGG + chr6_3:29213765-29213784 Msa0946910:intron 45.0%
GATTCCATTGATCCCATCTG+AGG + chr6_3:29214204-29214223 Msa0946910:intron 45.0%
TTCACCTCAGATGGGATCAA+TGG - chr6_3:29214211-29214230 None:intergenic 45.0%
! GATCCCATCTGAGGTGAAAT+TGG + chr6_3:29214213-29214232 Msa0946910:intron 45.0%
TAGTGCTAGTGGGAGATTGT+TGG + chr6_3:29214458-29214477 Msa0946910:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG - chr6_3:29210109-29210128 None:intergenic 45.0%
ACCACTATGATCCCTAGATG+TGG + chr6_3:29214948-29214967 Msa0946910:intron 45.0%
TCCACATCTAGGGATCATAG+TGG - chr6_3:29210102-29210121 None:intergenic 45.0%
AGCACTTGAGTCCACATCTA+GGG - chr6_3:29210092-29210111 None:intergenic 45.0%
AAGCACTTGAGTCCACATCT+AGG - chr6_3:29210091-29210110 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG - chr6_3:29210034-29210053 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG - chr6_3:29209624-29209643 None:intergenic 45.0%
CCAACGTGACTAGAACCTAT+AGG + chr6_3:29215427-29215446 Msa0946910:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG - chr6_3:29209389-29209408 None:intergenic 45.0%
!! CTTGGTGCTAGCCAATGAAT+TGG - chr6_3:29215685-29215704 None:intergenic 45.0%
!! CATTGGCTAGCACCAAGTTT+TGG + chr6_3:29215688-29215707 Msa0946910:intron 45.0%
AACAGTGCTCCTCCAAAACT+TGG - chr6_3:29209351-29209370 None:intergenic 45.0%
! TTTGTTGCTTGCTGCTTGCT+TGG + chr6_3:29215743-29215762 Msa0946910:intron 45.0%
CAGTTTCCAGTTCCAGCTTT+CGG + chr6_3:29215781-29215800 Msa0946910:intron 45.0%
CTTTCGGATTCCACAGTTCA+AGG + chr6_3:29215797-29215816 Msa0946910:intron 45.0%
GAAGAATGGAGTAGAAGCAG+CGG - chr6_3:29215890-29215909 None:intergenic 45.0%
TTTCGCTCTGATACCACTGA+AGG + chr6_3:29215919-29215938 Msa0946910:intron 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29209335-29209354 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29209351-29209370 Msa0946910:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29209389-29209408 Msa0946910:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29215427-29215446 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29209624-29209643 Msa0946910:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29209812-29209831 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29210034-29210053 Msa0946910:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29210109-29210128 Msa0946910:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29210192-29210211 Msa0946910:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29210391-29210410 None:intergenic 45.0%
CTATTAGGGCTTACTCCAAC+AGG + chr6_3:29210577-29210596 Msa0946910:intron 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29218051-29218070 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29218048-29218067 Msa0946910:intron 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29218313-29218332 Msa0946910:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29218314-29218333 Msa0946910:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29218333-29218352 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29218398-29218417 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29218399-29218418 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29218493-29218512 Msa0946910:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29218494-29218513 Msa0946910:intron 45.0%
CAGTGTTATGCCTAATGTGC+AGG + chr6_3:29218625-29218644 Msa0946910:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29219065-29219084 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29219231-29219250 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29219253-29219272 Msa0946910:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29219331-29219350 Msa0946910:CDS 45.0%
!! GAGAGGTTCTAAGCACAAGA+AGG - chr6_3:29219606-29219625 None:intergenic 45.0%
CTTAGAACCTCTCTCCTTTG+TGG + chr6_3:29219613-29219632 Msa0946910:three_prime_UTR 45.0%
AATGTCACCACAAAGGAGAG+AGG - chr6_3:29219623-29219642 None:intergenic 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29219630-29219649 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29219631-29219650 Msa0946910:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29219636-29219655 Msa0946910:three_prime_UTR 45.0%
! CATATTTCTGCTCCACTCCA+AGG - chr6_3:29219651-29219670 None:intergenic 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29219985-29220004 Msa0946910:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29219992-29220011 Msa0946910:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29220201-29220220 Msa0946910:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29220354-29220373 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29220356-29220375 Msa0946910:three_prime_UTR 45.0%
!!! TTAATATTCTATTTTATTAA+CGG - chr6_3:29213023-29213042 None:intergenic 5.0%
!! GTTTAATTAATTTATTTAAT+TGG + chr6_3:29213487-29213506 Msa0946910:intron 5.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29207803-29207822 Msa0946910:five_prime_UTR 50.0%
GAAGGTCTGACAAAGGTTGG+AGG + chr6_3:29208760-29208779 Msa0946910:CDS 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29209366-29209385 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29209369-29209388 Msa0946910:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29209981-29210000 Msa0946910:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29215057-29215076 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29215056-29215075 None:intergenic 50.0%
CAGGCCATTTACGACCTTCT+AGG + chr6_3:29211802-29211821 Msa0946910:intron 50.0%
TGACGTTAGGATAGTCCTGG+AGG + chr6_3:29211840-29211859 Msa0946910:intron 50.0%
ATAGTCCTGGAGGTCAAGCT+TGG + chr6_3:29211850-29211869 Msa0946910:intron 50.0%
AGGTCAAGCTTGGAGAAGCA+AGG + chr6_3:29211860-29211879 Msa0946910:intron 50.0%
GGAGAAGCAAGGTCGTTTCT+AGG + chr6_3:29211871-29211890 Msa0946910:intron 50.0%
ACCATGTGTCTCTTGCGTTG+CGG + chr6_3:29214182-29214201 Msa0946910:intron 50.0%
GTTAGCATCAAGCACACCCT+GGG - chr6_3:29214398-29214417 None:intergenic 50.0%
TGTTAGCATCAAGCACACCC+TGG - chr6_3:29214399-29214418 None:intergenic 50.0%
AGACTGATGACCGCATCTCA+TGG + chr6_3:29214766-29214785 Msa0946910:intron 50.0%
GACTGATGACCGCATCTCAT+GGG + chr6_3:29214767-29214786 Msa0946910:intron 50.0%
AGGGACATGAGTGTCCTAGA+TGG + chr6_3:29215056-29215075 Msa0946910:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG + chr6_3:29215057-29215076 Msa0946910:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG - chr6_3:29209981-29210000 None:intergenic 50.0%
!! TGGCTAGCACCAAGTTTTGG+AGG + chr6_3:29215691-29215710 Msa0946910:intron 50.0%
!! TGTTCGTGTGGACTTGCTAG+AGG + chr6_3:29215719-29215738 Msa0946910:intron 50.0%
CGAAAGCTGGAACTGGAAAC+TGG - chr6_3:29215783-29215802 None:intergenic 50.0%
TGGAATCCGAAAGCTGGAAC+TGG - chr6_3:29215790-29215809 None:intergenic 50.0%
GAACTGTGGAATCCGAAAGC+TGG - chr6_3:29215796-29215815 None:intergenic 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29209366-29209385 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29209369-29209388 Msa0946910:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29209981-29210000 Msa0946910:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29215057-29215076 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29215056-29215075 None:intergenic 50.0%
GTTTGGATTCACGTGCCTGT+TGG - chr6_3:29217370-29217389 None:intergenic 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29217451-29217470 Msa0946910:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29217460-29217479 Msa0946910:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29218298-29218317 Msa0946910:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29218397-29218416 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29218664-29218683 Msa0946910:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29218691-29218710 Msa0946910:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29218747-29218766 Msa0946910:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29220076-29220095 Msa0946910:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29220111-29220130 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29220246-29220265 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29220302-29220321 Msa0946910:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29220343-29220362 Msa0946910:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29220347-29220366 Msa0946910:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29220494-29220513 Msa0946910:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29220495-29220514 Msa0946910:three_prime_UTR 50.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29215707-29215726 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29209363-29209382 None:intergenic 55.0%
CTTCTCCAAGCTTGACCTCC+AGG - chr6_3:29211858-29211877 None:intergenic 55.0%
! ATAGAAAGTGCACCTCGCGG+AGG - chr6_3:29212139-29212158 None:intergenic 55.0%
TCCGCAACGCAAGAGACACA+TGG - chr6_3:29214186-29214205 None:intergenic 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG + chr6_3:29215707-29215726 Msa0946910:intron 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29215707-29215726 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29209363-29209382 None:intergenic 55.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29218389-29218408 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29218396-29218415 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29218685-29218704 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29218700-29218719 Msa0946910:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29218710-29218729 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29220346-29220365 Msa0946910:three_prime_UTR 55.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29218694-29218713 Msa0946910:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29218711-29218730 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29218708-29218727 Msa0946910:CDS 60.0%
GTGTAGGTTTCGCCTCCGCG+AGG + chr6_3:29212124-29212143 Msa0946910:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29207735 29220695 29207735 ID=Msa0946910;Name=Msa0946910
chr6_3 mRNA 29207735 29220695 29207735 ID=Msa0946910-mRNA-1;Parent=Msa0946910;Name=Msa0946910-mRNA-1;_AED=0.17;_eAED=0.17;_QI=224|0.71|0.87|1|0.42|0.62|8|1022|151
chr6_3 exon 29207735 29207824 29207735 ID=Msa0946910-mRNA-1:exon:7737;Parent=Msa0946910-mRNA-1
chr6_3 exon 29208331 29208390 29208331 ID=Msa0946910-mRNA-1:exon:7738;Parent=Msa0946910-mRNA-1
chr6_3 exon 29208507 29208585 29208507 ID=Msa0946910-mRNA-1:exon:7739;Parent=Msa0946910-mRNA-1
chr6_3 exon 29208732 29208802 29208732 ID=Msa0946910-mRNA-1:exon:7740;Parent=Msa0946910-mRNA-1
chr6_3 exon 29217713 29217805 29217713 ID=Msa0946910-mRNA-1:exon:7741;Parent=Msa0946910-mRNA-1
chr6_3 exon 29218647 29218793 29218647 ID=Msa0946910-mRNA-1:exon:7742;Parent=Msa0946910-mRNA-1
chr6_3 exon 29219275 29219718 29219275 ID=Msa0946910-mRNA-1:exon:7743;Parent=Msa0946910-mRNA-1
chr6_3 exon 29219978 29220695 29219978 ID=Msa0946910-mRNA-1:exon:7744;Parent=Msa0946910-mRNA-1
chr6_3 five_prime_UTR 29207735 29207824 29207735 ID=Msa0946910-mRNA-1:five_prime_utr;Parent=Msa0946910-mRNA-1
chr6_3 five_prime_UTR 29208331 29208390 29208331 ID=Msa0946910-mRNA-1:five_prime_utr;Parent=Msa0946910-mRNA-1
chr6_3 five_prime_UTR 29208507 29208580 29208507 ID=Msa0946910-mRNA-1:five_prime_utr;Parent=Msa0946910-mRNA-1
chr6_3 CDS 29208581 29208585 29208581 ID=Msa0946910-mRNA-1:cds;Parent=Msa0946910-mRNA-1
chr6_3 CDS 29208732 29208802 29208732 ID=Msa0946910-mRNA-1:cds;Parent=Msa0946910-mRNA-1
chr6_3 CDS 29217713 29217805 29217713 ID=Msa0946910-mRNA-1:cds;Parent=Msa0946910-mRNA-1
chr6_3 CDS 29218647 29218793 29218647 ID=Msa0946910-mRNA-1:cds;Parent=Msa0946910-mRNA-1
chr6_3 CDS 29219275 29219414 29219275 ID=Msa0946910-mRNA-1:cds;Parent=Msa0946910-mRNA-1
chr6_3 three_prime_UTR 29219415 29219718 29219415 ID=Msa0946910-mRNA-1:three_prime_utr;Parent=Msa0946910-mRNA-1
chr6_3 three_prime_UTR 29219978 29220695 29219978 ID=Msa0946910-mRNA-1:three_prime_utr;Parent=Msa0946910-mRNA-1
Gene Sequence

>Msa0946910

ATGGGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTTTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTCTTTCAGAATCTGAGTGA
Protein sequence

>Msa0946910

MGVERVNLQSIEGLTKVGGTVICVSAILVLKEELEKCRSKNFVPVLEEFIPLKKKCGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPILSESE*