AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0947230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947230 MtrunA17_Chr5g0410681 96.703 91 3 0 67 157 117 207 6.12e-58 182
Msa0947230 MtrunA17_Chr3g0136661 53.750 80 36 1 78 157 116 194 2.79e-21 87.4
Msa0947230 MtrunA17_Chr6g0452121 87.500 40 5 0 69 108 4 43 8.79e-19 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947230 AT1G32220.1 67.273 110 27 1 57 157 92 201 6.74e-47 154
Msa0947230 AT5G10730.1 49.367 79 39 1 78 156 117 194 2.26e-19 82.8
Msa0947230 AT5G15910.2 50.649 77 37 1 80 156 63 138 5.69e-18 78.2
Msa0947230 AT5G15910.1 50.649 77 37 1 80 156 104 179 6.94e-18 78.6

Find 93 sgRNAs with CRISPR-Local

Find 741 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29764730 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29765139 None:intergenic
GGAAGTGTTAATTGGATTTC+AGG 0.162392 6_3:-29765131 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29766100 Msa0947230:three_prime_UTR
GTGACTCGATTGTGTGTTTA+AGG 0.185242 6_3:+29766062 Msa0947230:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29765722 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29754233 Msa0947230:CDS
TTCTGAAAGAATAGGGAATT+TGG 0.232650 6_3:-29764832 None:intergenic
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29765152 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29763148 Msa0947230:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29754014 Msa0947230:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29764149 Msa0947230:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29765804 Msa0947230:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29765553 Msa0947230:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29763215 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29764113 Msa0947230:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29765586 Msa0947230:three_prime_UTR
CTTAGAACCTCTCTCCTTTG+TGG 0.386335 6_3:+29765061 Msa0947230:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29753797 Msa0947230:five_prime_UTR
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29764729 None:intergenic
CACTCAGATTCTGAAAGAAT+AGG 0.389610 6_3:-29764840 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29765691 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29765440 Msa0947230:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29754015 Msa0947230:exon
CCTCCTACCTTTCTACTAGA+AGG 0.393830 6_3:+29763497 Msa0947230:CDS
GTGAATTTGCAGAGTATTGA+AGG 0.399588 6_3:+29754194 Msa0947230:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29764221 Msa0947230:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29764780 Msa0947230:CDS
ACTCAGATTCTGAAAGAATA+GGG 0.420667 6_3:-29764839 None:intergenic
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29753224 Msa0947230:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29765509 Msa0947230:three_prime_UTR
TGCTGAGATATGCACTGATT+TGG 0.434101 6_3:+29766086 Msa0947230:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29765038 None:intergenic
TCTTTCAGAATCTGAGTGAA+TGG 0.452610 6_3:+29764845 Msa0947230:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29753986 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29765750 Msa0947230:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29763236 None:intergenic
GAAGTGTTAATTGGATTTCA+GGG 0.471856 6_3:-29765130 None:intergenic
CATATTTCTGCTCCACTCCA+AGG 0.478058 6_3:-29765096 None:intergenic
CTTCTAACCTTCTAGTAGAA+AGG 0.486036 6_3:-29763504 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29753786 Msa0947230:five_prime_UTR
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29753994 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29764131 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29765581 Msa0947230:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29765429 Msa0947230:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29754003 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29754016 Msa0947230:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29765935 Msa0947230:three_prime_UTR
ATTGAAGGTCTGACAAAGGT+TGG 0.527454 6_3:+29754209 Msa0947230:CDS
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29765943 Msa0947230:three_prime_UTR
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29765718 None:intergenic
GAACAAATGAGTAAGATTAA+CGG 0.549035 6_3:+29764179 Msa0947230:CDS
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29753970 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29765042 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29765539 Msa0947230:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29765510 Msa0947230:three_prime_UTR
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29765587 Msa0947230:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29754013 None:intergenic
GAGAGGTTCTAAGCACAAGA+AGG 0.561068 6_3:-29765051 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29753980 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29765506 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29765079 Msa0947230:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29764140 Msa0947230:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29765649 Msa0947230:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29765942 Msa0947230:three_prime_UTR
GAAGGTCTGACAAAGGTTGG+AGG 0.595901 6_3:+29754212 Msa0947230:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29763233 Msa0947230:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29765433 Msa0947230:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29765562 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29765524 Msa0947230:three_prime_UTR
AAGGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29754213 Msa0947230:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29765556 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29753232 Msa0947230:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29764156 None:intergenic
TAACCTTCTAGTAGAAAGGT+AGG 0.613210 6_3:-29763500 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29764196 Msa0947230:CDS
ATATGCTGAATTTCATCATG+AGG 0.622047 6_3:+29765467 Msa0947230:three_prime_UTR
CCTTCTAGTAGAAAGGTAGG+AGG 0.623552 6_3:-29763497 None:intergenic
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29753265 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29765848 Msa0947230:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29765936 Msa0947230:three_prime_UTR
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29764157 None:intergenic
ACTGCTGCATCTTATGCTAG+AGG 0.647560 6_3:+29753821 Msa0947230:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29765834 Msa0947230:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29753253 Msa0947230:five_prime_UTR
GAGTATTGAAGGTCTGACAA+AGG 0.665643 6_3:+29754205 Msa0947230:CDS
AATGTCACCACAAAGGAGAG+AGG 0.667419 6_3:-29765068 None:intergenic
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29765084 Msa0947230:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29765733 Msa0947230:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29765075 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29764143 Msa0947230:CDS
AATGAGTAAGATTAACGGCG+AGG 0.694649 6_3:+29764184 Msa0947230:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29765776 Msa0947230:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29755952-29755971 None:intergenic 10.0%
!!! TAATATTTTGATATTGTATA+AGG + chr6_3:29758426-29758445 Msa0947230:intron 10.0%
!!! ATTAAACATAAATATTTTCA+AGG - chr6_3:29758923-29758942 None:intergenic 10.0%
!! TGTGAATATATATAATAATA+AGG + chr6_3:29760001-29760020 Msa0947230:intron 10.0%
!! TTAACATAGATATAAATATT+AGG - chr6_3:29762464-29762483 None:intergenic 10.0%
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29755952-29755971 None:intergenic 10.0%
!! GAAAGAAAAAAAAAATCAAA+TGG + chr6_3:29753712-29753731 Msa0947230:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29754348-29754367 Msa0947230:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29760931-29760950 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29760930-29760949 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29755117-29755136 Msa0947230:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29755672-29755691 None:intergenic 15.0%
!! TTCACATAGATATAAATATT+AGG - chr6_3:29755689-29755708 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG - chr6_3:29759880-29759899 None:intergenic 15.0%
!! AATATTAACTCAATATCTAT+TGG + chr6_3:29756075-29756094 Msa0947230:intron 15.0%
!!! AACTTAATATTTTGAATTGA+AGG - chr6_3:29757507-29757526 None:intergenic 15.0%
!! TATTGTATAAGGAATTAATT+TGG + chr6_3:29758437-29758456 Msa0947230:intron 15.0%
!! TAATTTATTTAATTGGAGAA+AGG + chr6_3:29758943-29758962 Msa0947230:intron 15.0%
!!! TAATTAAATCTGCTTTATTT+AGG - chr6_3:29759090-29759109 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG + chr6_3:29759880-29759899 Msa0947230:intron 15.0%
!! TATACATAGGTATAAATATT+AGG + chr6_3:29760263-29760282 Msa0947230:intron 15.0%
!! ATACATAGGTATAAATATTA+GGG + chr6_3:29760264-29760283 Msa0947230:intron 15.0%
!! TTAATATTATAAACAATGAG+CGG - chr6_3:29755117-29755136 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG + chr6_3:29760930-29760949 Msa0947230:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG + chr6_3:29760931-29760950 Msa0947230:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29760931-29760950 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29760930-29760949 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29755117-29755136 Msa0947230:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29755672-29755691 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29763590-29763609 Msa0947230:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29763992-29764011 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29766120-29766139 Msa0947230:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29753387-29753406 Msa0947230:intron 20.0%
!!! CATAACATATTTTCTTCATA+AGG - chr6_3:29753585-29753604 None:intergenic 20.0%
!! CTTATGAAGAAAATATGTTA+TGG + chr6_3:29753583-29753602 Msa0947230:intron 20.0%
!!! TACATGTGTTTTATATGATA+AGG + chr6_3:29753680-29753699 Msa0947230:intron 20.0%
!! AATAGCAATTTATAAATCTG+AGG - chr6_3:29753869-29753888 None:intergenic 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29754316-29754335 Msa0947230:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29754317-29754336 Msa0947230:intron 20.0%
!! TTTGAACATCAACAAAATTA+AGG - chr6_3:29754556-29754575 None:intergenic 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29760932-29760951 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29760671-29760690 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29760670-29760689 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29760637-29760656 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG - chr6_3:29760610-29760629 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29755343-29755362 Msa0947230:intron 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29755829-29755848 Msa0947230:intron 20.0%
!! AAAGTATACATTTGAATCAT+TGG + chr6_3:29756230-29756249 Msa0947230:intron 20.0%
!! GATGTCAAATATAAATGATT+TGG - chr6_3:29756372-29756391 None:intergenic 20.0%
!!! TATGAAATTTGTAAAAGTAC+AGG - chr6_3:29759533-29759552 None:intergenic 20.0%
!!! TGTACTTTTACAAATTTCAT+AGG + chr6_3:29756421-29756440 Msa0947230:intron 20.0%
!!! AATCAATTTTGGTACATATT+AGG + chr6_3:29756623-29756642 Msa0947230:intron 20.0%
!!! CATGTATAGATAAATTGTTT+TGG + chr6_3:29756669-29756688 Msa0947230:intron 20.0%
!! TACAAAATTCATGTATGAAT+TGG - chr6_3:29756840-29756859 None:intergenic 20.0%
!! ATGTATTTGACATATATGTA+GGG - chr6_3:29756901-29756920 None:intergenic 20.0%
!! TATGTATTTGACATATATGT+AGG - chr6_3:29756902-29756921 None:intergenic 20.0%
!! ATATGTCAAATACATATACA+AGG + chr6_3:29756906-29756925 Msa0947230:intron 20.0%
!! TATTGTATAATGCAAATTCT+AGG - chr6_3:29756969-29756988 None:intergenic 20.0%
!! ATTATACAATAATGACAAGT+GGG + chr6_3:29756978-29756997 Msa0947230:intron 20.0%
!! ATTTAACCAATATCCATATA+TGG + chr6_3:29757172-29757191 Msa0947230:intron 20.0%
!!! ATTAGTTTAGATTCTCTTAT+TGG + chr6_3:29757343-29757362 Msa0947230:intron 20.0%
!! TAATAAAAGTGACATGATTA+TGG - chr6_3:29757396-29757415 None:intergenic 20.0%
!! ATAAATTTAGAAGCAATGTT+TGG + chr6_3:29757696-29757715 Msa0947230:intron 20.0%
!! TAAATTTAGAAGCAATGTTT+GGG + chr6_3:29757697-29757716 Msa0947230:intron 20.0%
!!! ATTTGTTTTGAGTAAAATAG+TGG + chr6_3:29757920-29757939 Msa0947230:intron 20.0%
!!! TTTGTTTTGAGTAAAATAGT+GGG + chr6_3:29757921-29757940 Msa0947230:intron 20.0%
!! TATACTGTTAAAAGTTCTTA+TGG + chr6_3:29758044-29758063 Msa0947230:intron 20.0%
!! CAAATGAGTAGAATTAAAAT+TGG + chr6_3:29758219-29758238 Msa0947230:intron 20.0%
!!! TCAGATATGATTTTTGAATT+TGG + chr6_3:29759007-29759026 Msa0947230:intron 20.0%
!! GATGTCAAATATATATGATT+TGG + chr6_3:29759583-29759602 Msa0947230:intron 20.0%
!! AAAGTATACATTTGGATTAT+TGG - chr6_3:29759721-29759740 None:intergenic 20.0%
!!! TCAATATTGATTGGATATTA+GGG - chr6_3:29759939-29759958 None:intergenic 20.0%
!!! ATCAATATTGATTGGATATT+AGG - chr6_3:29759940-29759959 None:intergenic 20.0%
!! TACATAGGTATAAATATTAG+GGG + chr6_3:29760265-29760284 Msa0947230:intron 20.0%
!!! TATCTTATATTGACTTAGTT+CGG - chr6_3:29755343-29755362 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG + chr6_3:29760610-29760629 Msa0947230:intron 20.0%
!! ATTCGTTATTCAGTATATTT+CGG + chr6_3:29760637-29760656 Msa0947230:intron 20.0%
!! TATAAACATTGATCTATACA+AGG + chr6_3:29760670-29760689 Msa0947230:intron 20.0%
!! ATAAACATTGATCTATACAA+GGG + chr6_3:29760671-29760690 Msa0947230:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG + chr6_3:29760932-29760951 Msa0947230:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29760932-29760951 None:intergenic 20.0%
!! CAATAAATATATTGAGACAA+AGG - chr6_3:29762010-29762029 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29760671-29760690 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29760670-29760689 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29760637-29760656 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29755343-29755362 Msa0947230:intron 20.0%
!! AATATAACTGTAAAATTGCA+TGG - chr6_3:29762149-29762168 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29755829-29755848 Msa0947230:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29762876-29762895 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29762967-29762986 Msa0947230:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29763049-29763068 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29763050-29763069 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29763088-29763107 Msa0947230:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29763329-29763348 None:intergenic 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG + chr6_3:29763339-29763358 Msa0947230:intron 20.0%
!!! TTATGATTTTATGGTAAGAT+CGG + chr6_3:29763348-29763367 Msa0947230:intron 20.0%
!! GAGAATATAGAAGAAAATTA+AGG + chr6_3:29763419-29763438 Msa0947230:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29763693-29763712 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29764097-29764116 Msa0947230:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29764533-29764552 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29764533-29764552 Msa0947230:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29764562-29764581 Msa0947230:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29764602-29764621 Msa0947230:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29764603-29764622 Msa0947230:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29764872-29764891 None:intergenic 20.0%
!! TGTTGTACTAACAAAAAAAA+AGG + chr6_3:29764913-29764932 Msa0947230:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29765142-29765161 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29765359-29765378 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29753268-29753287 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29753528-29753547 None:intergenic 25.0%
!!! TGTAATTCTTTGAAATACCA+AGG - chr6_3:29753558-29753577 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29753600-29753619 Msa0947230:intron 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29753907-29753926 Msa0947230:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29754123-29754142 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29754387-29754406 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29754424-29754443 Msa0947230:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29754505-29754524 Msa0947230:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29761055-29761074 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29760987-29761006 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29760986-29761005 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29755235-29755254 None:intergenic 25.0%
! AATATGACTGTAAAATTGCA+TGG - chr6_3:29760578-29760597 None:intergenic 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29760544-29760563 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29755796-29755815 Msa0947230:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29755830-29755849 Msa0947230:intron 25.0%
! ATACTTAATGTTCCATCAAA+CGG + chr6_3:29755869-29755888 Msa0947230:intron 25.0%
! ATTTATTCCAAATTACGATC+TGG + chr6_3:29756461-29756480 Msa0947230:intron 25.0%
!!! AATGATGTTGACTTTCATAT+AGG - chr6_3:29756499-29756518 None:intergenic 25.0%
! AATATCCTTGGATATCTTAA+AGG - chr6_3:29756574-29756593 None:intergenic 25.0%
!! TCGAACACTATAATCAATTT+TGG + chr6_3:29756612-29756631 Msa0947230:intron 25.0%
! CATTATACAATAATGACAAG+TGG + chr6_3:29756977-29756996 Msa0947230:intron 25.0%
! ATCATTATGCATGTTATGAT+TGG + chr6_3:29757423-29757442 Msa0947230:intron 25.0%
! TATATATGATATATAAGCCG+TGG + chr6_3:29757454-29757473 Msa0947230:intron 25.0%
!!! ATTTCGATATTAGTCTTGAA+GGG - chr6_3:29757553-29757572 None:intergenic 25.0%
! CTATATGATAGATTAGAGTA+AGG + chr6_3:29757725-29757744 Msa0947230:intron 25.0%
! AAAGTTGTATGAGATACAAT+TGG + chr6_3:29757770-29757789 Msa0947230:intron 25.0%
! TACTCAAAACTCAGTTATTT+AGG - chr6_3:29757808-29757827 None:intergenic 25.0%
! ATTACCTTCAACATTTGAAT+CGG - chr6_3:29757902-29757921 None:intergenic 25.0%
!! ATATCGATTATACATATCGA+CGG + chr6_3:29758318-29758337 Msa0947230:intron 25.0%
! TAACAATTGTTTGTTCAGTA+TGG - chr6_3:29758712-29758731 None:intergenic 25.0%
! TGATGTTTGATTGTTGTATT+AGG + chr6_3:29758739-29758758 Msa0947230:intron 25.0%
!! ATACAAGCGTTGTATTATTA+TGG + chr6_3:29758772-29758791 Msa0947230:intron 25.0%
! TGTTTCCAAAACAAATTACA+GGG - chr6_3:29759058-29759077 None:intergenic 25.0%
! TTGTTTCCAAAACAAATTAC+AGG - chr6_3:29759059-29759078 None:intergenic 25.0%
!! CATGTGTAGATAAATTGTTT+TGG - chr6_3:29759286-29759305 None:intergenic 25.0%
! ATTTGTACCAAAATTGATTG+TGG + chr6_3:29759333-29759352 Msa0947230:intron 25.0%
!! TAAGGATTGTTTCTTGAAAA+CGG + chr6_3:29759406-29759425 Msa0947230:intron 25.0%
!!! AATGATGCTGACTTTAATAT+CGG + chr6_3:29759456-29759475 Msa0947230:intron 25.0%
! ATTTATTCCAAATTGCGATT+TGG - chr6_3:29759494-29759513 None:intergenic 25.0%
! TAGAAACAACAACTATTTGA+AGG - chr6_3:29759558-29759577 None:intergenic 25.0%
! TGATACTATTCTAGTAGATA+AGG - chr6_3:29759822-29759841 None:intergenic 25.0%
! CAAACTCAATCAATATTGAT+TGG - chr6_3:29759948-29759967 None:intergenic 25.0%
!! CAATCAATATTGATTGAGTT+TGG + chr6_3:29759946-29759965 Msa0947230:intron 25.0%
! AGAATAGATAGTTCATGTAA+TGG + chr6_3:29760069-29760088 Msa0947230:intron 25.0%
! TTCATATTAAAGCTTGACTA+TGG - chr6_3:29760157-29760176 None:intergenic 25.0%
!! AGTCAAGCTTTAATATGAAT+TGG + chr6_3:29760158-29760177 Msa0947230:intron 25.0%
!! GTCAAGCTTTAATATGAATT+GGG + chr6_3:29760159-29760178 Msa0947230:intron 25.0%
! GAGATATTAAGTCTATACAT+AGG + chr6_3:29760250-29760269 Msa0947230:intron 25.0%
! ATTAGGGGTAATATTTATAC+TGG + chr6_3:29760280-29760299 Msa0947230:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG + chr6_3:29760544-29760563 Msa0947230:intron 25.0%
! AATATGACTGTAAAATTGCA+TGG + chr6_3:29760578-29760597 Msa0947230:intron 25.0%
! AAAATTACTAAACTCGTTGT+TGG + chr6_3:29760986-29761005 Msa0947230:intron 25.0%
! AAATTACTAAACTCGTTGTT+GGG + chr6_3:29760987-29761006 Msa0947230:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG + chr6_3:29761055-29761074 Msa0947230:intron 25.0%
!! AATTTTCGATTTTCATTCCT+TGG - chr6_3:29761314-29761333 None:intergenic 25.0%
!!! GAATTTTGATTTTCTTTCCT+TGG + chr6_3:29761441-29761460 Msa0947230:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29761055-29761074 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29760987-29761006 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29760986-29761005 None:intergenic 25.0%
! CAATATATTTATTGATCCCA+AGG + chr6_3:29762016-29762035 Msa0947230:intron 25.0%
! TACAGTTATATTTCATCAAG+AGG + chr6_3:29762157-29762176 Msa0947230:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29760544-29760563 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29755796-29755815 Msa0947230:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29755830-29755849 Msa0947230:intron 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr6_3:29762836-29762855 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29762884-29762903 Msa0947230:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29763062-29763081 Msa0947230:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29763063-29763082 Msa0947230:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29763106-29763125 Msa0947230:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29763148-29763167 Msa0947230:intron 25.0%
!! TAAAAATTTTGTGCCAGTTT+TGG + chr6_3:29763202-29763221 Msa0947230:CDS 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29763457-29763476 Msa0947230:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+TGG + chr6_3:29763885-29763904 Msa0947230:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29763987-29764006 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29764096-29764115 Msa0947230:CDS 25.0%
! GAACAAATGAGTAAGATTAA+CGG + chr6_3:29764179-29764198 Msa0947230:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29764350-29764369 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29764427-29764446 Msa0947230:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29764529-29764548 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29764732-29764751 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29764733-29764752 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29765155-29765174 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29765221-29765240 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29765315-29765334 Msa0947230:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29765316-29765335 Msa0947230:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29765908-29765927 Msa0947230:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29753189-29753208 Msa0947230:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29753224-29753243 Msa0947230:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29753364-29753383 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29753415-29753434 Msa0947230:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29753518-29753537 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29753523-29753542 None:intergenic 30.0%
!! TCTTTGAAATACCAAGGAAA+TGG - chr6_3:29753552-29753571 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29753629-29753648 Msa0947230:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29753745-29753764 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29753761-29753780 Msa0947230:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29753771-29753790 Msa0947230:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29753786-29753805 Msa0947230:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29753797-29753816 Msa0947230:five_prime_UTR 30.0%
CCTGATCATAAATCAATAGA+GGG - chr6_3:29753902-29753921 None:intergenic 30.0%
TCCTGATCATAAATCAATAG+AGG - chr6_3:29753903-29753922 None:intergenic 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29753931-29753950 Msa0947230:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29753935-29753954 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29753937-29753956 Msa0947230:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29754134-29754153 Msa0947230:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29754247-29754266 Msa0947230:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29754261-29754280 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29754388-29754407 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29754386-29754405 Msa0947230:intron 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr6_3:29754575-29754594 Msa0947230:intron 30.0%
! GAATTTCGATTTTCTTTCCT+TGG + chr6_3:29754666-29754685 Msa0947230:intron 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29760751-29760770 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29760746-29760765 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29755241-29755260 Msa0947230:intron 30.0%
TTCAGTATATTTCGGAATCA+AGG - chr6_3:29760645-29760664 None:intergenic 30.0%
!! TATATTGACTTAGTTCGGTA+TGG + chr6_3:29755348-29755367 Msa0947230:intron 30.0%
TACAGTCATATTTCATCAAG+AGG + chr6_3:29755382-29755401 Msa0947230:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29755410-29755429 Msa0947230:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29760455-29760474 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29760439-29760458 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29755512-29755531 Msa0947230:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29755637-29755656 Msa0947230:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29755762-29755781 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29755763-29755782 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29755794-29755813 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29755795-29755814 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29755831-29755850 Msa0947230:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29756010-29756029 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29756011-29756030 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29756011-29756030 Msa0947230:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29756012-29756031 Msa0947230:intron 30.0%
AGTATATCCAGATCGTAATT+TGG - chr6_3:29756471-29756490 None:intergenic 30.0%
! TATGGATTGTTTCTTGAACA+TGG - chr6_3:29756549-29756568 None:intergenic 30.0%
TTGGATATCTTAAAGGACTA+TGG - chr6_3:29756567-29756586 None:intergenic 30.0%
!! ATAGTCCTTTAAGATATCCA+AGG + chr6_3:29756566-29756585 Msa0947230:intron 30.0%
ATATCCAAGGATATTCTTGA+AGG + chr6_3:29756579-29756598 Msa0947230:intron 30.0%
AATACCTTCAAGAATATCCT+TGG - chr6_3:29756586-29756605 None:intergenic 30.0%
TTATCTATACATGTGAGACA+TGG - chr6_3:29756662-29756681 None:intergenic 30.0%
AAAGAAATCTTGTGCACATA+AGG - chr6_3:29756752-29756771 None:intergenic 30.0%
! ATAATGCAAATTCTAGGAGA+TGG - chr6_3:29756963-29756982 None:intergenic 30.0%
AAGATGTGATTGATTGTAGA+AGG - chr6_3:29757072-29757091 None:intergenic 30.0%
CACAAACCATATATGGATAT+TGG - chr6_3:29757181-29757200 None:intergenic 30.0%
!! CATTTCGATATTAGTCTTGA+AGG - chr6_3:29757554-29757573 None:intergenic 30.0%
AGACTAATATCGAAATGTGT+AGG + chr6_3:29757557-29757576 Msa0947230:intron 30.0%
CTTTCTATACTAGTAAGTTG+CGG + chr6_3:29757600-29757619 Msa0947230:intron 30.0%
AGAATAACACTTGGGTAAAT+TGG - chr6_3:29757635-29757654 None:intergenic 30.0%
!! TTACCCAAGTGTTATTCTTT+TGG + chr6_3:29757637-29757656 Msa0947230:intron 30.0%
!! TACCCAAGTGTTATTCTTTT+GGG + chr6_3:29757638-29757657 Msa0947230:intron 30.0%
AACCCAAAAGAATAACACTT+GGG - chr6_3:29757643-29757662 None:intergenic 30.0%
AAACCCAAAAGAATAACACT+TGG - chr6_3:29757644-29757663 None:intergenic 30.0%
TTGTATGAGATACAATTGGA+AGG + chr6_3:29757774-29757793 Msa0947230:intron 30.0%
CAAAACTCAGTTATTTAGGT+AGG - chr6_3:29757804-29757823 None:intergenic 30.0%
ACTTAAAGCAAGGTGAAATA+TGG + chr6_3:29757840-29757859 Msa0947230:intron 30.0%
!! TCATTGGAAGATTTTCTAGT+GGG - chr6_3:29757873-29757892 None:intergenic 30.0%
TTTGAATCGGAAAATCTCAT+TGG - chr6_3:29757889-29757908 None:intergenic 30.0%
! TTTTCCGATTCAAATGTTGA+AGG + chr6_3:29757895-29757914 Msa0947230:intron 30.0%
TCAGAAAAGAGTTTCTGAAT+TGG + chr6_3:29758079-29758098 Msa0947230:intron 30.0%
! TATCGATTATACATATCGAC+GGG + chr6_3:29758319-29758338 Msa0947230:intron 30.0%
GATGATATCATTCGTTCAAT+AGG + chr6_3:29758598-29758617 Msa0947230:intron 30.0%
AATACAACGCTTGTATAGTT+AGG - chr6_3:29758768-29758787 None:intergenic 30.0%
!!! TTTAGCCCTGTAATTTGTTT+TGG + chr6_3:29759050-29759069 Msa0947230:intron 30.0%
ATAAAAATCTTGTGCACACA+AGG + chr6_3:29759203-29759222 Msa0947230:intron 30.0%
AACACTTTCAAGAATATCCA+TGG + chr6_3:29759369-29759388 Msa0947230:intron 30.0%
AATATCCATGGATGTCTTAA+AGG + chr6_3:29759381-29759400 Msa0947230:intron 30.0%
!! GTTTCTTGAAAACGGATTAA+AGG + chr6_3:29759414-29759433 Msa0947230:intron 30.0%
AGTATATCCAAATCGCAATT+TGG + chr6_3:29759484-29759503 Msa0947230:intron 30.0%
! TTTGGAATAAATGCTATGCT+TGG + chr6_3:29759502-29759521 Msa0947230:intron 30.0%
! GAAGTGTCAAAGTATACATT+TGG - chr6_3:29756222-29756241 None:intergenic 30.0%
! ACACTTCAATTTCTTTTCGA+TGG + chr6_3:29759742-29759761 Msa0947230:intron 30.0%
TAAGGAACTATTTCCTATGT+TGG - chr6_3:29759804-29759823 None:intergenic 30.0%
CATACTATGTAGTATTCTCA+CGG - chr6_3:29760315-29760334 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG - chr6_3:29755512-29755531 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG + chr6_3:29760439-29760458 Msa0947230:intron 30.0%
TAAAAGGATAACCATAACGT+TGG + chr6_3:29760455-29760474 Msa0947230:intron 30.0%
AGATATATCTCCTGTTTATG+AGG - chr6_3:29755410-29755429 None:intergenic 30.0%
TACAGTCATATTTCATCAAG+AGG - chr6_3:29755382-29755401 None:intergenic 30.0%
TTCAGTATATTTCGGAATCA+AGG + chr6_3:29760645-29760664 Msa0947230:intron 30.0%
CAATAAAGATATCGAGACAA+AGG + chr6_3:29760717-29760736 Msa0947230:intron 30.0%
TGTACACATGAGTATTATCA+TGG + chr6_3:29760746-29760765 Msa0947230:intron 30.0%
ACATGAGTATTATCATGGAA+AGG + chr6_3:29760751-29760770 Msa0947230:intron 30.0%
CGAAAAATCGAATAGAAGAA+TGG - chr6_3:29761353-29761372 None:intergenic 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29760751-29760770 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29760746-29760765 None:intergenic 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29755410-29755429 Msa0947230:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29760455-29760474 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29760439-29760458 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29755512-29755531 Msa0947230:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29755637-29755656 Msa0947230:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29755762-29755781 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29755763-29755782 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29755794-29755813 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29755795-29755814 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29755831-29755850 Msa0947230:intron 30.0%
! AGAATAGTTAGTCTGTTTGA+TGG - chr6_3:29762659-29762678 None:intergenic 30.0%
TCAAACAGACTAACTATTCT+AGG + chr6_3:29762659-29762678 Msa0947230:intron 30.0%
CAAACAGACTAACTATTCTA+GGG + chr6_3:29762660-29762679 Msa0947230:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29756010-29756029 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29756011-29756030 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29756011-29756030 Msa0947230:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29756012-29756031 Msa0947230:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr6_3:29762838-29762857 Msa0947230:intron 30.0%
TTAATTATGTTGTCTTCCTC+AGG - chr6_3:29762948-29762967 None:intergenic 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29762993-29763012 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29762992-29763011 Msa0947230:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29762993-29763012 Msa0947230:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29763067-29763086 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29763105-29763124 Msa0947230:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29763107-29763126 Msa0947230:intron 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29763233-29763252 Msa0947230:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29763239-29763258 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29763246-29763265 Msa0947230:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29763276-29763295 None:intergenic 30.0%
!! AGATCGGTTGATTTGAAAAT+AGG + chr6_3:29763364-29763383 Msa0947230:intron 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29763731-29763750 Msa0947230:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29763732-29763751 Msa0947230:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29763788-29763807 Msa0947230:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29763862-29763881 None:intergenic 30.0%
! GAGATTTTGTTAAAATGGTC+AGG + chr6_3:29763890-29763909 Msa0947230:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29764042-29764061 Msa0947230:intron 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29764433-29764452 Msa0947230:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29764537-29764556 Msa0947230:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29764767-29764786 Msa0947230:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29764768-29764787 Msa0947230:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29764769-29764788 Msa0947230:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29764803-29764822 Msa0947230:CDS 30.0%
! TTCTGAAAGAATAGGGAATT+TGG - chr6_3:29764835-29764854 None:intergenic 30.0%
! ACTCAGATTCTGAAAGAATA+GGG - chr6_3:29764842-29764861 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29765013-29765032 Msa0947230:three_prime_UTR 30.0%
! GAAGTGTTAATTGGATTTCA+GGG - chr6_3:29765133-29765152 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29765145-29765164 Msa0947230:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29765380-29765399 Msa0947230:intron 30.0%
GTATGGTTAATTTATCACTC+TGG + chr6_3:29765397-29765416 Msa0947230:intron 30.0%
ATATGCTGAATTTCATCATG+AGG + chr6_3:29765467-29765486 Msa0947230:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29765721-29765740 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29765725-29765744 None:intergenic 30.0%
GCAGTTATCACCAACAATTT+CGG - chr6_3:29753428-29753447 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29753538-29753557 Msa0947230:intron 35.0%
TACCAAGGAAATGGAATTCT+TGG - chr6_3:29753543-29753562 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29753605-29753624 Msa0947230:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29753628-29753647 Msa0947230:intron 35.0%
!! CCCTCTATTGATTTATGATC+AGG + chr6_3:29753899-29753918 Msa0947230:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29753997-29754016 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29754015-29754034 Msa0947230:exon 35.0%
!! GTGAATTTGCAGAGTATTGA+AGG + chr6_3:29754194-29754213 Msa0947230:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29754301-29754320 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29754611-29754630 Msa0947230:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29754686-29754705 None:intergenic 35.0%
ACATGAATCAGTGATACGAT+TGG + chr6_3:29754704-29754723 Msa0947230:intron 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29754732-29754751 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29754928-29754947 Msa0947230:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29754929-29754948 Msa0947230:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29760786-29760805 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29755413-29755432 Msa0947230:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29755414-29755433 Msa0947230:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29760486-29760505 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29760463-29760482 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29760462-29760481 None:intergenic 35.0%
AGAATAGTTAGTCCGTTTGA+TGG - chr6_3:29755884-29755903 None:intergenic 35.0%
!! TCAAACGGACTAACTATTCT+AGG + chr6_3:29755884-29755903 Msa0947230:intron 35.0%
!! CAAACGGACTAACTATTCTA+GGG + chr6_3:29755885-29755904 Msa0947230:intron 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29756005-29756024 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29756003-29756022 Msa0947230:intron 35.0%
AGATACTCTACTAGCAGATA+AGG + chr6_3:29756129-29756148 Msa0947230:intron 35.0%
TAAGGAACTCTTTCCTATGT+TGG + chr6_3:29756147-29756166 Msa0947230:intron 35.0%
TTTCGATAGAAGATCGAAAG+TGG - chr6_3:29756195-29756214 None:intergenic 35.0%
! AATCTCGTCTGAGGTAAAAT+TGG - chr6_3:29756291-29756310 None:intergenic 35.0%
TTTACCTCAGACGAGATTAA+TGG + chr6_3:29756293-29756312 Msa0947230:intron 35.0%
AATATGTGTTTCTTGCGTTG+TGG - chr6_3:29756322-29756341 None:intergenic 35.0%
! TATTAGTTTGGTGGAGTATG+TGG - chr6_3:29759245-29759264 None:intergenic 35.0%
!! GAGCATTGATATTAGTTTGG+TGG - chr6_3:29759236-29759255 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG - chr6_3:29759233-29759252 None:intergenic 35.0%
! TATACCTTTCTAGCATCCTT+TGG + chr6_3:29756865-29756884 Msa0947230:intron 35.0%
TAATCCAAAGGATGCTAGAA+AGG - chr6_3:29756872-29756891 None:intergenic 35.0%
TTTCTTGTAGAAAGCTGACA+TGG - chr6_3:29757115-29757134 None:intergenic 35.0%
TCTCATGAGTCATACTCATT+TGG + chr6_3:29757146-29757165 Msa0947230:intron 35.0%
CCATGTACACAAACCATATA+TGG - chr6_3:29757188-29757207 None:intergenic 35.0%
! CCATATATGGTTTGTGTACA+TGG + chr6_3:29757185-29757204 Msa0947230:intron 35.0%
GGATTCTTTATAAGATCCCA+TGG + chr6_3:29757206-29757225 Msa0947230:intron 35.0%
TTAGCCATTTCTCAAAGTTC+AGG + chr6_3:29757232-29757251 Msa0947230:intron 35.0%
!!! CTTGAAGGGTGTTAAACTTT+TGG - chr6_3:29757539-29757558 None:intergenic 35.0%
! CTCATTGGAAGATTTTCTAG+TGG - chr6_3:29757874-29757893 None:intergenic 35.0%
! CGTATCATGTTTTATGTGCA+TGG + chr6_3:29758245-29758264 Msa0947230:intron 35.0%
TGTCAATACTTCACCAGAAA+CGG - chr6_3:29758299-29758318 None:intergenic 35.0%
GTTTGTTTAGCATGAACAAC+CGG - chr6_3:29758897-29758916 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG + chr6_3:29759233-29759252 Msa0947230:intron 35.0%
!! GAGCATTGATATTAGTTTGG+TGG + chr6_3:29759236-29759255 Msa0947230:intron 35.0%
! TATTAGTTTGGTGGAGTATG+TGG + chr6_3:29759245-29759264 Msa0947230:intron 35.0%
TTATCTACACATGTGAGACA+TGG + chr6_3:29759293-29759312 Msa0947230:intron 35.0%
! TCGAACACCACAATCAATTT+TGG - chr6_3:29759343-29759362 None:intergenic 35.0%
!! TTAGTCCTTTAAGACATCCA+TGG - chr6_3:29759389-29759408 None:intergenic 35.0%
ATGGATGTCTTAAAGGACTA+AGG + chr6_3:29759388-29759407 Msa0947230:intron 35.0%
AAACCAATTTCACCTCAGAT+GGG - chr6_3:29759668-29759687 None:intergenic 35.0%
TAAACCAATTTCACCTCAGA+TGG - chr6_3:29759669-29759688 None:intergenic 35.0%
GAACTATTTCCTATGTTGGT+AGG - chr6_3:29759800-29759819 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG + chr6_3:29760462-29760481 Msa0947230:intron 35.0%
! TAACCATAACGTTGGTTGAT+GGG + chr6_3:29760463-29760482 Msa0947230:intron 35.0%
TACTTGATGAATCATGCTGA+GGG + chr6_3:29760486-29760505 Msa0947230:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG - chr6_3:29755414-29755433 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG - chr6_3:29755413-29755432 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG - chr6_3:29762123-29762142 None:intergenic 35.0%
GGTGACAATATCTATGTCTT+GGG + chr6_3:29760692-29760711 Msa0947230:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG + chr6_3:29760786-29760805 Msa0947230:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG - chr6_3:29754929-29754948 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG - chr6_3:29754928-29754947 None:intergenic 35.0%
CTGAATTTCGTAATGATCCA+AGG + chr6_3:29761294-29761313 Msa0947230:intron 35.0%
! ATCTTTCGATTTTCCTTCAG+TGG - chr6_3:29754600-29754619 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29754611-29754630 Msa0947230:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29754686-29754705 None:intergenic 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29754732-29754751 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29754928-29754947 Msa0947230:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29754929-29754948 Msa0947230:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29760786-29760805 None:intergenic 35.0%
TTCAGTATATTTCGGAATCG+AGG - chr6_3:29762082-29762101 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG + chr6_3:29762123-29762142 Msa0947230:intron 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29755413-29755432 Msa0947230:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29755414-29755433 Msa0947230:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29760486-29760505 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29760463-29760482 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29760462-29760481 None:intergenic 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29756005-29756024 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29756003-29756022 Msa0947230:intron 35.0%
!! TGGTATATCTGTTTTTCCTG+AGG + chr6_3:29762929-29762948 Msa0947230:intron 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29762977-29762996 Msa0947230:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29763157-29763176 Msa0947230:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29763160-29763179 Msa0947230:intron 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29763218-29763237 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29763503-29763522 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29763507-29763526 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29763915-29763934 Msa0947230:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29763960-29763979 Msa0947230:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29763961-29763980 Msa0947230:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29764087-29764106 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29764221-29764240 Msa0947230:CDS 35.0%
CAAAATAACGCTCAATGAGA+TGG - chr6_3:29764251-29764270 None:intergenic 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29764307-29764326 Msa0947230:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29764504-29764523 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29764576-29764595 Msa0947230:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29764771-29764790 None:intergenic 35.0%
! CACTCAGATTCTGAAAGAAT+AGG - chr6_3:29764843-29764862 None:intergenic 35.0%
TCTTTCAGAATCTGAGTGAA+TGG + chr6_3:29764845-29764864 Msa0947230:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29765045-29765064 None:intergenic 35.0%
!! GGAAGTGTTAATTGGATTTC+AGG - chr6_3:29765134-29765153 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29765539-29765558 Msa0947230:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29765765-29765784 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29765776-29765795 Msa0947230:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29765834-29765853 Msa0947230:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29765886-29765905 Msa0947230:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29765899-29765918 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29765935-29765954 Msa0947230:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29765936-29765955 Msa0947230:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29766100-29766119 Msa0947230:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29753232-29753251 Msa0947230:five_prime_UTR 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29753468-29753487 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29754006-29754025 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29754016-29754035 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29754014-29754033 Msa0947230:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29754016-29754035 Msa0947230:exon 40.0%
!! GAGTATTGAAGGTCTGACAA+AGG + chr6_3:29754205-29754224 Msa0947230:CDS 40.0%
ATTGAAGGTCTGACAAAGGT+TGG + chr6_3:29754209-29754228 Msa0947230:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29754233-29754252 Msa0947230:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29754287-29754306 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29754449-29754468 Msa0947230:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29754452-29754471 Msa0947230:intron 40.0%
! CGATTCTAAAAAAGCAGCCT+CGG - chr6_3:29754525-29754544 None:intergenic 40.0%
!! CTTCAGTGCCACTGTAATTT+TGG - chr6_3:29754586-29754605 None:intergenic 40.0%
! CAAAATTACAGTGGCACTGA+AGG + chr6_3:29754584-29754603 Msa0947230:intron 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29761120-29761139 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29754836-29754855 Msa0947230:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29754837-29754856 Msa0947230:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29761070-29761089 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29755058-29755077 Msa0947230:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29760877-29760896 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29760785-29760804 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29755260-29755279 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29760529-29760548 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29760485-29760504 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29755640-29755659 Msa0947230:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29755731-29755750 None:intergenic 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG - chr6_3:29759897-29759916 None:intergenic 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG - chr6_3:29759896-29759915 None:intergenic 40.0%
TGTTAGCATCAAGCACACTA+TGG + chr6_3:29756103-29756122 Msa0947230:intron 40.0%
GAACTCTTTCCTATGTTGGT+AGG + chr6_3:29756151-29756170 Msa0947230:intron 40.0%
GAAGTAAGACCTACCAACAT+AGG - chr6_3:29756163-29756182 None:intergenic 40.0%
GATTCCATTAATCTCGTCTG+AGG - chr6_3:29756300-29756319 None:intergenic 40.0%
GTGCACATAAGGAGATTAGT+GGG - chr6_3:29756741-29756760 None:intergenic 40.0%
TGTGCACATAAGGAGATTAG+TGG - chr6_3:29756742-29756761 None:intergenic 40.0%
GTAGGGTTTCGTTAATCCAA+AGG - chr6_3:29756884-29756903 None:intergenic 40.0%
TTGTAGAAAGCTGACATGGA+TGG - chr6_3:29757111-29757130 None:intergenic 40.0%
! ATGGCCTGAACTTTGAGAAA+TGG - chr6_3:29757239-29757258 None:intergenic 40.0%
ACTTCCTAGAAGGTCGTAAA+TGG - chr6_3:29757258-29757277 None:intergenic 40.0%
! ACGACCTTCTAGGAAGTAAT+AGG + chr6_3:29757261-29757280 Msa0947230:intron 40.0%
! CGACCTTCTAGGAAGTAATA+GGG + chr6_3:29757262-29757281 Msa0947230:intron 40.0%
CTTGAGAGATTCATAGCGTT+AGG + chr6_3:29757366-29757385 Msa0947230:intron 40.0%
AGAGATTCATAGCGTTAGGA+TGG + chr6_3:29757370-29757389 Msa0947230:intron 40.0%
ATGATATATAAGCCGTGGTG+AGG + chr6_3:29757459-29757478 Msa0947230:intron 40.0%
TATACTAGTAAGTTGCGGTG+CGG + chr6_3:29757605-29757624 Msa0947230:intron 40.0%
! TTCACCTTGCTTTAAGTCAG+CGG - chr6_3:29757837-29757856 None:intergenic 40.0%
! ACAACGCTTATCAGAAGCAT+TGG + chr6_3:29758194-29758213 Msa0947230:intron 40.0%
!! CAACGCTTATCAGAAGCATT+GGG + chr6_3:29758195-29758214 Msa0947230:intron 40.0%
GATGTTTCAGAAACCGTTTC+TGG + chr6_3:29758283-29758302 Msa0947230:intron 40.0%
CTTTGATGCTTCACCAGAAT+CGG - chr6_3:29758679-29758698 None:intergenic 40.0%
GTTTGTTCAGTATGGACAAC+CGG - chr6_3:29758704-29758723 None:intergenic 40.0%
TGAGCTTCAATATCCGAATC+TGG + chr6_3:29758856-29758875 Msa0947230:intron 40.0%
CTATGATGCTTCACCAGATT+CGG - chr6_3:29758872-29758891 None:intergenic 40.0%
TTTCGATGGAAGATCGAAAG+TGG + chr6_3:29759756-29759775 Msa0947230:intron 40.0%
GAAGTGTAACCTACCAACAT+AGG + chr6_3:29759788-29759807 Msa0947230:intron 40.0%
ACTAGAATAGTATCATGCCC+AGG + chr6_3:29759827-29759846 Msa0947230:intron 40.0%
CTAGAATAGTATCATGCCCA+GGG + chr6_3:29759828-29759847 Msa0947230:intron 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG + chr6_3:29759896-29759915 Msa0947230:intron 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG + chr6_3:29759897-29759916 Msa0947230:intron 40.0%
TATCAATGACCCATGAGATG+CGG - chr6_3:29760228-29760247 None:intergenic 40.0%
CTATGTAGTATTCTCACGGT+GGG - chr6_3:29760311-29760330 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+TGG - chr6_3:29755640-29755659 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG + chr6_3:29760485-29760504 Msa0947230:intron 40.0%
ATTTGTCCCTCCTCATAAAC+AGG + chr6_3:29760529-29760548 Msa0947230:intron 40.0%
GGGTGACAATATCTATGTCT+TGG + chr6_3:29760691-29760710 Msa0947230:intron 40.0%
CACTTGACATTCTTGTCACT+TGG + chr6_3:29760785-29760804 Msa0947230:intron 40.0%
CAACGTGACTAGAACCTATA+GGG + chr6_3:29760877-29760896 Msa0947230:intron 40.0%
TTCTTTGTGTGTGACCCTAT+AGG - chr6_3:29755058-29755077 None:intergenic 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG + chr6_3:29761070-29761089 Msa0947230:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG - chr6_3:29754837-29754856 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG - chr6_3:29754836-29754855 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG + chr6_3:29761120-29761139 Msa0947230:intron 40.0%
TCGATTGTTACCTTGAACTG+TGG - chr6_3:29761259-29761278 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29761120-29761139 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29754836-29754855 Msa0947230:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29754837-29754856 Msa0947230:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29761070-29761089 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29755058-29755077 Msa0947230:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29760877-29760896 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29760785-29760804 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29755260-29755279 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29760529-29760548 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29760485-29760504 None:intergenic 40.0%
AAGCACTTGAGTTCACATCT+AGG + chr6_3:29762315-29762334 Msa0947230:intron 40.0%
AGCACTTGAGTTCACATCTA+GGG + chr6_3:29762316-29762335 Msa0947230:intron 40.0%
TTCACATCTAGGGATCATAG+TGG + chr6_3:29762326-29762345 Msa0947230:intron 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29755640-29755659 Msa0947230:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29755731-29755750 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29762915-29762934 None:intergenic 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29763114-29763133 Msa0947230:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29763115-29763134 Msa0947230:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29763735-29763754 Msa0947230:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29763925-29763944 Msa0947230:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29763936-29763955 Msa0947230:intron 40.0%
AATGAGTAAGATTAACGGCG+AGG + chr6_3:29764184-29764203 Msa0947230:CDS 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29764300-29764319 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29764719-29764738 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29765041-29765060 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29765319-29765338 Msa0947230:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29765329-29765348 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29765429-29765448 Msa0947230:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29765489-29765508 Msa0947230:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29765509-29765528 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29765509-29765528 Msa0947230:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29765510-29765529 Msa0947230:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29765553-29765572 Msa0947230:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29765565-29765584 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29765562-29765581 Msa0947230:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29765581-29765600 Msa0947230:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29765586-29765605 Msa0947230:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29765587-29765606 Msa0947230:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29765733-29765752 Msa0947230:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29765848-29765867 Msa0947230:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29765874-29765893 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29765880-29765899 None:intergenic 40.0%
GTGACTCGATTGTGTGTTTA+AGG + chr6_3:29766062-29766081 Msa0947230:three_prime_UTR 40.0%
!! TGCTGAGATATGCACTGATT+TGG + chr6_3:29766086-29766105 Msa0947230:three_prime_UTR 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29753639-29753658 Msa0947230:intron 45.0%
ACTGCTGCATCTTATGCTAG+AGG + chr6_3:29753821-29753840 Msa0947230:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29753973-29753992 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29753983-29754002 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29753989-29754008 None:intergenic 45.0%
AAGGTCTGACAAAGGTTGGA+GGG + chr6_3:29754213-29754232 Msa0947230:CDS 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29754784-29754803 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29754800-29754819 Msa0947230:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29754838-29754857 Msa0947230:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29760876-29760895 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29755073-29755092 Msa0947230:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29755261-29755280 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29755483-29755502 Msa0947230:intron 45.0%
AAGCACTTGAGTCCACATCT+AGG + chr6_3:29755540-29755559 Msa0947230:intron 45.0%
AGCACTTGAGTCCACATCTA+GGG + chr6_3:29755541-29755560 Msa0947230:intron 45.0%
TCCACATCTAGGGATCATAG+TGG + chr6_3:29755551-29755570 Msa0947230:intron 45.0%
ACCACTATGATCCCTAGATG+TGG - chr6_3:29760397-29760416 None:intergenic 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29755558-29755577 Msa0947230:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29755641-29755660 Msa0947230:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29755840-29755859 None:intergenic 45.0%
TAGTGCTAGTGGGAGATTGT+TGG - chr6_3:29759907-29759926 None:intergenic 45.0%
GAGAAATGGCTAAACGCCAT+GGG - chr6_3:29757225-29757244 None:intergenic 45.0%
TGAGAAATGGCTAAACGCCA+TGG - chr6_3:29757226-29757245 None:intergenic 45.0%
GAGCCCTATTACTTCCTAGA+AGG - chr6_3:29757268-29757287 None:intergenic 45.0%
GTAATAGGGCTCATGACGTT+AGG + chr6_3:29757276-29757295 Msa0947230:intron 45.0%
TCATGACGTTAGGATAGTCC+TGG + chr6_3:29757286-29757305 Msa0947230:intron 45.0%
AGTTTGATCTCACCTCACCA+CGG - chr6_3:29757474-29757493 None:intergenic 45.0%
! AGTATAGAAAGTGCACCTCG+CGG - chr6_3:29757591-29757610 None:intergenic 45.0%
! TCACCTTGCTTTAAGTCAGC+GGG - chr6_3:29757836-29757855 None:intergenic 45.0%
CATATCGACGGGAACATGAT+TGG + chr6_3:29758330-29758349 Msa0947230:intron 45.0%
!! TGAGCTTCGAATACCGATTC+TGG + chr6_3:29758663-29758682 Msa0947230:intron 45.0%
! CTGGTGAAGCATCAAAGATC+CGG + chr6_3:29758682-29758701 Msa0947230:intron 45.0%
! CTGGTGAAGCATCATAGATC+CGG + chr6_3:29758875-29758894 Msa0947230:intron 45.0%
TGTGCACACAAGGAGAATAG+TGG + chr6_3:29759213-29759232 Msa0947230:intron 45.0%
GTGCACACAAGGAGAATAGT+GGG + chr6_3:29759214-29759233 Msa0947230:intron 45.0%
GATTCCATTGATCCCATCTG+AGG + chr6_3:29759653-29759672 Msa0947230:intron 45.0%
TTCACCTCAGATGGGATCAA+TGG - chr6_3:29759660-29759679 None:intergenic 45.0%
! GATCCCATCTGAGGTGAAAT+TGG + chr6_3:29759662-29759681 Msa0947230:intron 45.0%
TAGTGCTAGTGGGAGATTGT+TGG + chr6_3:29759907-29759926 Msa0947230:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG - chr6_3:29755558-29755577 None:intergenic 45.0%
ACCACTATGATCCCTAGATG+TGG + chr6_3:29760397-29760416 Msa0947230:intron 45.0%
TCCACATCTAGGGATCATAG+TGG - chr6_3:29755551-29755570 None:intergenic 45.0%
AGCACTTGAGTCCACATCTA+GGG - chr6_3:29755541-29755560 None:intergenic 45.0%
AAGCACTTGAGTCCACATCT+AGG - chr6_3:29755540-29755559 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG - chr6_3:29755483-29755502 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG - chr6_3:29755073-29755092 None:intergenic 45.0%
CCAACGTGACTAGAACCTAT+AGG + chr6_3:29760876-29760895 Msa0947230:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG - chr6_3:29754838-29754857 None:intergenic 45.0%
!! CTTGGTGCTAGCCAATGAAT+TGG - chr6_3:29761134-29761153 None:intergenic 45.0%
!! CATTGGCTAGCACCAAGTTT+TGG + chr6_3:29761137-29761156 Msa0947230:intron 45.0%
AACAGTGCTCCTCCAAAACT+TGG - chr6_3:29754800-29754819 None:intergenic 45.0%
! TTTGTTGCTTGCTGCTTGCT+TGG + chr6_3:29761192-29761211 Msa0947230:intron 45.0%
CAGTTTCCAGTTCCAGCTTT+CGG + chr6_3:29761230-29761249 Msa0947230:intron 45.0%
CTTTCGGATTCCACAGTTCA+AGG + chr6_3:29761246-29761265 Msa0947230:intron 45.0%
GAAGAATGGAGTAGAAGCAG+CGG - chr6_3:29761339-29761358 None:intergenic 45.0%
TTTCGCTCTGATACCACTGA+AGG + chr6_3:29761368-29761387 Msa0947230:intron 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29754784-29754803 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29754800-29754819 Msa0947230:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29754838-29754857 Msa0947230:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29760876-29760895 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29755073-29755092 Msa0947230:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29755261-29755280 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29755483-29755502 Msa0947230:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29755558-29755577 Msa0947230:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29755641-29755660 Msa0947230:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29755840-29755859 None:intergenic 45.0%
CTATTAGGGCTTACTCCAAC+AGG + chr6_3:29756026-29756045 Msa0947230:intron 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29763500-29763519 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29763497-29763516 Msa0947230:CDS 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29763762-29763781 Msa0947230:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29763763-29763782 Msa0947230:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29763782-29763801 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29763847-29763866 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29763848-29763867 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29763942-29763961 Msa0947230:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29763943-29763962 Msa0947230:intron 45.0%
CAGTGTTATGCCTAATGTGC+AGG + chr6_3:29764074-29764093 Msa0947230:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29764514-29764533 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29764680-29764699 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29764702-29764721 Msa0947230:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29764780-29764799 Msa0947230:CDS 45.0%
!! GAGAGGTTCTAAGCACAAGA+AGG - chr6_3:29765054-29765073 None:intergenic 45.0%
CTTAGAACCTCTCTCCTTTG+TGG + chr6_3:29765061-29765080 Msa0947230:three_prime_UTR 45.0%
AATGTCACCACAAAGGAGAG+AGG - chr6_3:29765071-29765090 None:intergenic 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29765078-29765097 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29765079-29765098 Msa0947230:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29765084-29765103 Msa0947230:three_prime_UTR 45.0%
! CATATTTCTGCTCCACTCCA+AGG - chr6_3:29765099-29765118 None:intergenic 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29765433-29765452 Msa0947230:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29765440-29765459 Msa0947230:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29765649-29765668 Msa0947230:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29765802-29765821 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29765804-29765823 Msa0947230:three_prime_UTR 45.0%
!!! TTAATATTCTATTTTATTAA+CGG - chr6_3:29758472-29758491 None:intergenic 5.0%
!! GTTTAATTAATTTATTTAAT+TGG + chr6_3:29758936-29758955 Msa0947230:intron 5.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29753253-29753272 Msa0947230:five_prime_UTR 50.0%
!! GCTAGAGGTACTAGCAGCAA+TGG + chr6_3:29753836-29753855 Msa0947230:intron 50.0%
GAAGGTCTGACAAAGGTTGG+AGG + chr6_3:29754212-29754231 Msa0947230:CDS 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29754815-29754834 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29754818-29754837 Msa0947230:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29755430-29755449 Msa0947230:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29760506-29760525 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29760505-29760524 None:intergenic 50.0%
CAGGCCATTTACGACCTTCT+AGG + chr6_3:29757251-29757270 Msa0947230:intron 50.0%
TGACGTTAGGATAGTCCTGG+AGG + chr6_3:29757289-29757308 Msa0947230:intron 50.0%
ATAGTCCTGGAGGTCAAGCT+TGG + chr6_3:29757299-29757318 Msa0947230:intron 50.0%
AGGTCAAGCTTGGAGAAGCA+AGG + chr6_3:29757309-29757328 Msa0947230:intron 50.0%
GGAGAAGCAAGGTCGTTTCT+AGG + chr6_3:29757320-29757339 Msa0947230:intron 50.0%
! ACCTTGCTTTAAGTCAGCGG+GGG - chr6_3:29757834-29757853 None:intergenic 50.0%
! CACCTTGCTTTAAGTCAGCG+GGG - chr6_3:29757835-29757854 None:intergenic 50.0%
ACCATGTGTCTCTTGCGTTG+CGG + chr6_3:29759631-29759650 Msa0947230:intron 50.0%
GTTAGCATCAAGCACACCCT+GGG - chr6_3:29759847-29759866 None:intergenic 50.0%
TGTTAGCATCAAGCACACCC+TGG - chr6_3:29759848-29759867 None:intergenic 50.0%
AGACTGATGACCGCATCTCA+TGG + chr6_3:29760215-29760234 Msa0947230:intron 50.0%
GACTGATGACCGCATCTCAT+GGG + chr6_3:29760216-29760235 Msa0947230:intron 50.0%
AGGGACATGAGTGTCCTAGA+TGG + chr6_3:29760505-29760524 Msa0947230:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG + chr6_3:29760506-29760525 Msa0947230:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG - chr6_3:29755430-29755449 None:intergenic 50.0%
!! TGGCTAGCACCAAGTTTTGG+AGG + chr6_3:29761140-29761159 Msa0947230:intron 50.0%
!! TGTTCGTGTGGACTTGCTAG+AGG + chr6_3:29761168-29761187 Msa0947230:intron 50.0%
CGAAAGCTGGAACTGGAAAC+TGG - chr6_3:29761232-29761251 None:intergenic 50.0%
TGGAATCCGAAAGCTGGAAC+TGG - chr6_3:29761239-29761258 None:intergenic 50.0%
GAACTGTGGAATCCGAAAGC+TGG - chr6_3:29761245-29761264 None:intergenic 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29754815-29754834 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29754818-29754837 Msa0947230:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29755430-29755449 Msa0947230:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29760506-29760525 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29760505-29760524 None:intergenic 50.0%
GTTTGGATTCACGTGCCTGT+TGG - chr6_3:29762819-29762838 None:intergenic 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29762900-29762919 Msa0947230:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29762909-29762928 Msa0947230:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29763747-29763766 Msa0947230:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29763846-29763865 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29764113-29764132 Msa0947230:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29764140-29764159 Msa0947230:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29764196-29764215 Msa0947230:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29765524-29765543 Msa0947230:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29765559-29765578 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29765694-29765713 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29765750-29765769 Msa0947230:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29765791-29765810 Msa0947230:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29765795-29765814 Msa0947230:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29765942-29765961 Msa0947230:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29765943-29765962 Msa0947230:three_prime_UTR 50.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29761156-29761175 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29754812-29754831 None:intergenic 55.0%
CTTCTCCAAGCTTGACCTCC+AGG - chr6_3:29757307-29757326 None:intergenic 55.0%
! ATAGAAAGTGCACCTCGCGG+AGG - chr6_3:29757588-29757607 None:intergenic 55.0%
TCCGCAACGCAAGAGACACA+TGG - chr6_3:29759635-29759654 None:intergenic 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG + chr6_3:29761156-29761175 Msa0947230:intron 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29761156-29761175 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29754812-29754831 None:intergenic 55.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29763838-29763857 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29763845-29763864 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29764134-29764153 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29764149-29764168 Msa0947230:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29764159-29764178 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29765794-29765813 Msa0947230:three_prime_UTR 55.0%
!! GCCCCCGCTGACTTAAAGCA+AGG + chr6_3:29757830-29757849 Msa0947230:intron 60.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29764143-29764162 Msa0947230:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29764160-29764179 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29764157-29764176 Msa0947230:CDS 60.0%
GTGTAGGTTTCGCCTCCGCG+AGG + chr6_3:29757573-29757592 Msa0947230:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29753185 29766143 29753185 ID=Msa0947230;Name=Msa0947230
chr6_3 mRNA 29753185 29766143 29753185 ID=Msa0947230-mRNA-1;Parent=Msa0947230;Name=Msa0947230-mRNA-1;_AED=0.18;_eAED=0.18;_QI=224|0.62|0.77|0.88|0.62|0.66|9|1021|163
chr6_3 exon 29753185 29753274 29753185 ID=Msa0947230-mRNA-1:exon:7848;Parent=Msa0947230-mRNA-1
chr6_3 exon 29753783 29753842 29753783 ID=Msa0947230-mRNA-1:exon:7849;Parent=Msa0947230-mRNA-1
chr6_3 exon 29753959 29754037 29753959 ID=Msa0947230-mRNA-1:exon:7850;Parent=Msa0947230-mRNA-1
chr6_3 exon 29754184 29754254 29754184 ID=Msa0947230-mRNA-1:exon:7851;Parent=Msa0947230-mRNA-1
chr6_3 exon 29763162 29763254 29763162 ID=Msa0947230-mRNA-1:exon:7852;Parent=Msa0947230-mRNA-1
chr6_3 exon 29763483 29763518 29763483 ID=Msa0947230-mRNA-1:exon:7853;Parent=Msa0947230-mRNA-1
chr6_3 exon 29764096 29764242 29764096 ID=Msa0947230-mRNA-1:exon:7854;Parent=Msa0947230-mRNA-1
chr6_3 exon 29764724 29765166 29764724 ID=Msa0947230-mRNA-1:exon:7855;Parent=Msa0947230-mRNA-1
chr6_3 exon 29765426 29766143 29765426 ID=Msa0947230-mRNA-1:exon:7856;Parent=Msa0947230-mRNA-1
chr6_3 five_prime_UTR 29753185 29753274 29753185 ID=Msa0947230-mRNA-1:five_prime_utr;Parent=Msa0947230-mRNA-1
chr6_3 five_prime_UTR 29753783 29753842 29753783 ID=Msa0947230-mRNA-1:five_prime_utr;Parent=Msa0947230-mRNA-1
chr6_3 five_prime_UTR 29753959 29754032 29753959 ID=Msa0947230-mRNA-1:five_prime_utr;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29754033 29754037 29754033 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29754184 29754254 29754184 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29763162 29763254 29763162 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29763483 29763518 29763483 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29764096 29764242 29764096 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 CDS 29764724 29764863 29764724 ID=Msa0947230-mRNA-1:cds;Parent=Msa0947230-mRNA-1
chr6_3 three_prime_UTR 29764864 29765166 29764864 ID=Msa0947230-mRNA-1:three_prime_utr;Parent=Msa0947230-mRNA-1
chr6_3 three_prime_UTR 29765426 29766143 29765426 ID=Msa0947230-mRNA-1:three_prime_utr;Parent=Msa0947230-mRNA-1
Gene Sequence

>Msa0947230

ATGGGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTTTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGTTTCGTCGTCGTCTCCTCCTACCTTTCTACTAGAAGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTCTTTCAGAATCTGAGTGA
Protein sequence

>Msa0947230

MGVERVNLQSIEGLTKVGGTVICVSAILVLKEELEKCRSKNFVPVLEEFIPLKKKCVSSSSPPTFLLEGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPILSESE*