AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0947180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947180 MtrunA17_Chr5g0410681 95.604 91 4 0 64 154 117 207 3.34e-49 160
Msa0947180 MtrunA17_Chr3g0136661 52.500 80 37 1 75 154 116 194 8.85e-21 85.9
Msa0947180 MtrunA17_Chr6g0452121 85.000 40 6 0 66 105 4 43 3.86e-18 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947180 AT1G32220.1 67.273 110 27 1 54 154 92 201 7.17e-47 154
Msa0947180 AT5G10730.1 48.101 79 40 1 75 153 117 194 5.91e-19 81.6
Msa0947180 AT5G15910.2 50.649 77 37 1 77 153 63 138 1.03e-17 77.4
Msa0947180 AT5G15910.1 50.649 77 37 1 77 153 104 179 1.11e-17 77.8

Find 89 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29701043 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29701453 None:intergenic
GTGAATCGATTGTGTGTTTA+AGG 0.162846 6_3:+29702376 Msa0947180:three_prime_UTR
TTCTGAAACAATAGGGAATT+TGG 0.170765 6_3:-29701145 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29702414 Msa0947180:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29702036 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29698798 Msa0947180:CDS
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29701466 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29699461 Msa0947180:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29698579 Msa0947180:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29700462 Msa0947180:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29702118 Msa0947180:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29701867 Msa0947180:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29699528 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29700426 Msa0947180:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29701900 Msa0947180:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29698362 Msa0947180:five_prime_UTR
CACTCAGATTCTGAAACAAT+AGG 0.387450 6_3:-29701153 None:intergenic
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29701042 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29702005 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29701754 Msa0947180:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29698580 Msa0947180:exon
CCTCCTACCTTTCTACTAGA+AGG 0.393830 6_3:+29699810 Msa0947180:CDS
CTTAGAACCTATCTCCTTTG+TGG 0.404902 6_3:+29701375 Msa0947180:three_prime_UTR
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29700534 Msa0947180:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29701093 Msa0947180:CDS
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29697793 Msa0947180:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29701823 Msa0947180:three_prime_UTR
TGTTGAGATATGCACTGATT+TGG 0.431092 6_3:+29702400 Msa0947180:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29701352 None:intergenic
TGTTTCAGAATCTGAGTGAA+TGG 0.454782 6_3:+29701158 Msa0947180:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29698551 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29702064 Msa0947180:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29699549 None:intergenic
ACTCAGATTCTGAAACAATA+GGG 0.475824 6_3:-29701152 None:intergenic
CTTCTAACCTTCTAGTAGAA+AGG 0.486036 6_3:-29699817 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29698351 Msa0947180:five_prime_UTR
ATTGAAAGTCTGACAAAGGT+TGG 0.504916 6_3:+29698774 Msa0947180:CDS
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29698559 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29700444 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29701895 Msa0947180:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29701743 Msa0947180:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29698568 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29698581 Msa0947180:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29702249 Msa0947180:three_prime_UTR
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29702257 Msa0947180:three_prime_UTR
GAACAAATGAGTGAGATTAA+CGG 0.534767 6_3:+29700492 Msa0947180:CDS
AATGTCACCACAAAGGAGAT+AGG 0.541295 6_3:-29701382 None:intergenic
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29702032 None:intergenic
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29698535 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29701356 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29701853 Msa0947180:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29701824 Msa0947180:three_prime_UTR
GATAGGTTCTAAGCACAAGA+AGG 0.552733 6_3:-29701365 None:intergenic
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29701901 Msa0947180:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29698578 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29698545 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29701820 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29701393 Msa0947180:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29700453 Msa0947180:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29701963 Msa0947180:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29702256 Msa0947180:three_prime_UTR
GAAAGTCTGACAAAGGTTGG+AGG 0.593605 6_3:+29698777 Msa0947180:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29699546 Msa0947180:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29701747 Msa0947180:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29701876 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29701838 Msa0947180:three_prime_UTR
AAAGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29698778 Msa0947180:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29701870 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29697801 Msa0947180:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29700469 None:intergenic
TAACCTTCTAGTAGAAAGGT+AGG 0.613210 6_3:-29699813 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29700509 Msa0947180:CDS
CCTTCTAGTAGAAAGGTAGG+AGG 0.623552 6_3:-29699810 None:intergenic
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29697834 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29702162 Msa0947180:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29702250 Msa0947180:three_prime_UTR
GAGTATTGAAAGTCTGACAA+AGG 0.643899 6_3:+29698770 Msa0947180:CDS
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29700470 None:intergenic
ATATGCAGAATTTCATCATG+AGG 0.647471 6_3:+29701781 Msa0947180:three_prime_UTR
ACTGCTGCATCTTATGCAAG+AGG 0.648151 6_3:+29698386 Msa0947180:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29702148 Msa0947180:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29697822 Msa0947180:five_prime_UTR
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29701398 Msa0947180:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29702047 Msa0947180:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29701389 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29700456 Msa0947180:CDS
AATGAGTGAGATTAACGGCG+AGG 0.703765 6_3:+29700497 Msa0947180:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29702090 Msa0947180:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATGATTTAAATTTATTTA+TGG + chr6_3:29700953-29700972 Msa0947180:intron 10.0%
!! TGAAAGAAAAAAAAATCAAA+TGG + chr6_3:29698277-29698296 Msa0947180:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29698913-29698932 Msa0947180:intron 15.0%
!!! TTGTTGTGTTTATAATTTTA+TGG + chr6_3:29699652-29699671 Msa0947180:intron 15.0%
!!! TTATAATTTTATGGTAAGAT+TGG + chr6_3:29699661-29699680 Msa0947180:intron 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29699903-29699922 Msa0947180:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29700305-29700324 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29702434-29702453 Msa0947180:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29697956-29697975 Msa0947180:intron 20.0%
!!! CATAACATATTTTCTTGATA+AGG - chr6_3:29698154-29698173 None:intergenic 20.0%
!! CTTATCAAGAAAATATGTTA+TGG + chr6_3:29698152-29698171 Msa0947180:intron 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29698881-29698900 Msa0947180:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29698882-29698901 Msa0947180:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29699186-29699205 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29699280-29699299 Msa0947180:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29699362-29699381 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29699363-29699382 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29699401-29699420 Msa0947180:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29699642-29699661 None:intergenic 20.0%
!! GAGAATATAGAAGTAAATTA+AGG + chr6_3:29699732-29699751 Msa0947180:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29700006-29700025 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29700410-29700429 Msa0947180:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29700846-29700865 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29700846-29700865 Msa0947180:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29700875-29700894 Msa0947180:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29700915-29700934 Msa0947180:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29700916-29700935 Msa0947180:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29701185-29701204 None:intergenic 20.0%
!! GTTGTACTAACAAAAAAAAA+AGG + chr6_3:29701227-29701246 Msa0947180:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29701456-29701475 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29701673-29701692 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29697837-29697856 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29698097-29698116 None:intergenic 25.0%
!!! TGTAATTCTTTGAAATACCA+AGG - chr6_3:29698127-29698146 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29698169-29698188 Msa0947180:intron 25.0%
! AATAGCAGTTTATAAATCTG+AGG - chr6_3:29698434-29698453 None:intergenic 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29698472-29698491 Msa0947180:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29698688-29698707 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29698952-29698971 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29698989-29699008 Msa0947180:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29699070-29699089 Msa0947180:intron 25.0%
! TTTGAACCTCAACAAAATTA+AGG - chr6_3:29699121-29699140 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29699194-29699213 Msa0947180:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29699375-29699394 Msa0947180:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29699376-29699395 Msa0947180:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29699419-29699438 Msa0947180:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29699461-29699480 Msa0947180:intron 25.0%
!!! AGATTGGTTGATTTGAAAAT+AGG + chr6_3:29699677-29699696 Msa0947180:intron 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29699770-29699789 Msa0947180:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+AGG + chr6_3:29700198-29700217 Msa0947180:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29700300-29700319 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29700409-29700428 Msa0947180:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29700663-29700682 None:intergenic 25.0%
! ATTAACTGTCATATATAAGC+AGG + chr6_3:29700662-29700681 Msa0947180:intron 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29700740-29700759 Msa0947180:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29700842-29700861 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29701045-29701064 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29701046-29701065 None:intergenic 25.0%
!!! GAAGTGTTAATTGGATTTTA+GGG - chr6_3:29701447-29701466 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29701469-29701488 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29701535-29701554 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29701629-29701648 Msa0947180:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29701630-29701649 Msa0947180:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29702222-29702241 Msa0947180:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29697758-29697777 Msa0947180:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29697793-29697812 Msa0947180:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29697933-29697952 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29697984-29698003 Msa0947180:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29698087-29698106 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29698092-29698111 None:intergenic 30.0%
!! TCTTTGAAATACCAAGGAAA+TGG - chr6_3:29698121-29698140 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29698198-29698217 Msa0947180:intron 30.0%
! TGCATGTGTTTTATATGATG+AGG + chr6_3:29698246-29698265 Msa0947180:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29698310-29698329 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29698326-29698345 Msa0947180:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29698336-29698355 Msa0947180:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29698351-29698370 Msa0947180:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29698362-29698381 Msa0947180:five_prime_UTR 30.0%
!! CTCTCTATTGATTTATGATC+AGG + chr6_3:29698464-29698483 Msa0947180:intron 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29698496-29698515 Msa0947180:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29698500-29698519 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29698502-29698521 Msa0947180:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29698699-29698718 Msa0947180:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29698812-29698831 Msa0947180:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29698826-29698845 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29698953-29698972 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29698951-29698970 Msa0947180:intron 30.0%
! TGTCACTACGATTCTAAAAA+AGG - chr6_3:29699098-29699117 None:intergenic 30.0%
! CCACACTATTACTGTAATTT+TGG - chr6_3:29699151-29699170 None:intergenic 30.0%
CCAAAATTACAGTAATAGTG+TGG + chr6_3:29699148-29699167 Msa0947180:intron 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29699306-29699325 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29699305-29699324 Msa0947180:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29699306-29699325 Msa0947180:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29699380-29699399 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29699418-29699437 Msa0947180:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29699420-29699439 Msa0947180:intron 30.0%
! TAAAAATTGTGTGCCAGTTT+TGG + chr6_3:29699515-29699534 Msa0947180:CDS 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29699546-29699565 Msa0947180:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29699552-29699571 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29699559-29699578 Msa0947180:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29699589-29699608 None:intergenic 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29700044-29700063 Msa0947180:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29700045-29700064 Msa0947180:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29700101-29700120 Msa0947180:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29700175-29700194 None:intergenic 30.0%
! GAGATTTTGTTAAAAAGGTC+AGG + chr6_3:29700203-29700222 Msa0947180:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29700355-29700374 Msa0947180:intron 30.0%
GAACAAATGAGTGAGATTAA+CGG + chr6_3:29700492-29700511 Msa0947180:CDS 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29700746-29700765 Msa0947180:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29700850-29700869 Msa0947180:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29701080-29701099 Msa0947180:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29701081-29701100 Msa0947180:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29701082-29701101 Msa0947180:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29701116-29701135 Msa0947180:CDS 30.0%
!! TTCTGAAACAATAGGGAATT+TGG - chr6_3:29701148-29701167 None:intergenic 30.0%
!! ACTCAGATTCTGAAACAATA+GGG - chr6_3:29701155-29701174 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29701327-29701346 Msa0947180:three_prime_UTR 30.0%
!!! GGAAGTGTTAATTGGATTTT+AGG - chr6_3:29701448-29701467 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29701459-29701478 Msa0947180:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29701694-29701713 Msa0947180:intron 30.0%
ATATGCAGAATTTCATCATG+AGG + chr6_3:29701781-29701800 Msa0947180:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29702035-29702054 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29702039-29702058 None:intergenic 30.0%
CCAGTTATCACCAACAATTT+CGG - chr6_3:29697997-29698016 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29698107-29698126 Msa0947180:intron 35.0%
TACCAAGGAAATGGAATTCT+TGG - chr6_3:29698112-29698131 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29698174-29698193 Msa0947180:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29698197-29698216 Msa0947180:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29698562-29698581 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29698580-29698599 Msa0947180:exon 35.0%
GCAAATTCACTCTTTCTACA+CGG - chr6_3:29698749-29698768 None:intergenic 35.0%
!! GAGTATTGAAAGTCTGACAA+AGG + chr6_3:29698770-29698789 Msa0947180:CDS 35.0%
ATTGAAAGTCTGACAAAGGT+TGG + chr6_3:29698774-29698793 Msa0947180:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29698866-29698885 None:intergenic 35.0%
! GTGACACCTTAATTTTGTTG+AGG + chr6_3:29699112-29699131 Msa0947180:intron 35.0%
ATTATGTTGTTGTCTTCCTC+AGG - chr6_3:29699258-29699277 None:intergenic 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29699290-29699309 Msa0947180:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29699470-29699489 Msa0947180:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29699473-29699492 Msa0947180:intron 35.0%
!!! TTTGGTTTTGAAGGAGGAAT+TGG + chr6_3:29699479-29699498 Msa0947180:CDS 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29699531-29699550 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29699816-29699835 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29699820-29699839 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29700228-29700247 Msa0947180:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29700273-29700292 Msa0947180:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29700274-29700293 Msa0947180:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29700400-29700419 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29700534-29700553 Msa0947180:CDS 35.0%
CAAAATAACGCTCAATGAGA+TGG - chr6_3:29700564-29700583 None:intergenic 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29700620-29700639 Msa0947180:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29700817-29700836 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29700889-29700908 Msa0947180:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29701084-29701103 None:intergenic 35.0%
!! CACTCAGATTCTGAAACAAT+AGG - chr6_3:29701156-29701175 None:intergenic 35.0%
TGTTTCAGAATCTGAGTGAA+TGG + chr6_3:29701158-29701177 Msa0947180:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29701359-29701378 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29701853-29701872 Msa0947180:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29702079-29702098 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29702090-29702109 Msa0947180:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29702148-29702167 Msa0947180:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29702200-29702219 Msa0947180:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29702213-29702232 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29702249-29702268 Msa0947180:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29702250-29702269 Msa0947180:three_prime_UTR 35.0%
GTGAATCGATTGTGTGTTTA+AGG + chr6_3:29702376-29702395 Msa0947180:three_prime_UTR 35.0%
!! TGTTGAGATATGCACTGATT+TGG + chr6_3:29702400-29702419 Msa0947180:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29702414-29702433 Msa0947180:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29697801-29697820 Msa0947180:five_prime_UTR 40.0%
!! CCGAAATTGTTGGTGATAAC+TGG + chr6_3:29697994-29698013 Msa0947180:intron 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29698037-29698056 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29698571-29698590 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29698581-29698600 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29698579-29698598 Msa0947180:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29698581-29698600 Msa0947180:exon 40.0%
AAAGTCTGACAAAGGTTGGA+GGG + chr6_3:29698778-29698797 Msa0947180:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29698798-29698817 Msa0947180:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29698852-29698871 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29699014-29699033 Msa0947180:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29699017-29699036 Msa0947180:intron 40.0%
! CGATTCTAAAAAAGGAGCCT+CGG - chr6_3:29699090-29699109 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29699225-29699244 None:intergenic 40.0%
!! TGGTATATCTGCTTTTCCTG+AGG + chr6_3:29699239-29699258 Msa0947180:intron 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29699427-29699446 Msa0947180:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29699428-29699447 Msa0947180:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29700048-29700067 Msa0947180:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29700238-29700257 Msa0947180:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29700249-29700268 Msa0947180:intron 40.0%
TAGTGTTATGCCTAATGTGC+AGG + chr6_3:29700387-29700406 Msa0947180:intron 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29700613-29700632 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29701032-29701051 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29701355-29701374 None:intergenic 40.0%
!! GATAGGTTCTAAGCACAAGA+AGG - chr6_3:29701368-29701387 None:intergenic 40.0%
CTTAGAACCTATCTCCTTTG+TGG + chr6_3:29701375-29701394 Msa0947180:three_prime_UTR 40.0%
AATGTCACCACAAAGGAGAT+AGG - chr6_3:29701385-29701404 None:intergenic 40.0%
!! CATATTTTTGCTCCACTCCA+AGG - chr6_3:29701413-29701432 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29701633-29701652 Msa0947180:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29701643-29701662 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29701743-29701762 Msa0947180:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29701803-29701822 Msa0947180:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29701823-29701842 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29701823-29701842 Msa0947180:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29701824-29701843 Msa0947180:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29701867-29701886 Msa0947180:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29701879-29701898 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29701876-29701895 Msa0947180:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29701895-29701914 Msa0947180:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29701900-29701919 Msa0947180:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29701901-29701920 Msa0947180:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29702047-29702066 Msa0947180:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29702162-29702181 Msa0947180:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29702188-29702207 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29702194-29702213 None:intergenic 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29698208-29698227 Msa0947180:intron 45.0%
ACTGCTGCATCTTATGCAAG+AGG + chr6_3:29698386-29698405 Msa0947180:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29698538-29698557 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29698548-29698567 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29698554-29698573 None:intergenic 45.0%
GAAAGTCTGACAAAGGTTGG+AGG + chr6_3:29698777-29698796 Msa0947180:CDS 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29699813-29699832 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29699810-29699829 Msa0947180:CDS 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29700075-29700094 Msa0947180:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29700076-29700095 Msa0947180:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29700095-29700114 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29700160-29700179 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29700161-29700180 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29700255-29700274 Msa0947180:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29700256-29700275 Msa0947180:intron 45.0%
AATGAGTGAGATTAACGGCG+AGG + chr6_3:29700497-29700516 Msa0947180:CDS 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29700827-29700846 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29700993-29701012 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29701015-29701034 Msa0947180:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29701093-29701112 Msa0947180:CDS 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29701392-29701411 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29701393-29701412 Msa0947180:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29701398-29701417 Msa0947180:three_prime_UTR 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29701747-29701766 Msa0947180:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29701754-29701773 Msa0947180:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29701963-29701982 Msa0947180:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29702116-29702135 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29702118-29702137 Msa0947180:three_prime_UTR 45.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29697822-29697841 Msa0947180:five_prime_UTR 50.0%
!! GCAAGAGGTACTAGCAGCAA+TGG + chr6_3:29698401-29698420 Msa0947180:intron 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29699210-29699229 Msa0947180:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29699219-29699238 Msa0947180:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29700060-29700079 Msa0947180:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29700159-29700178 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29700426-29700445 Msa0947180:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29700453-29700472 Msa0947180:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29700509-29700528 Msa0947180:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29701838-29701857 Msa0947180:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29701873-29701892 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29702008-29702027 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29702064-29702083 Msa0947180:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29702105-29702124 Msa0947180:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29702109-29702128 Msa0947180:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29702256-29702275 Msa0947180:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29702257-29702276 Msa0947180:three_prime_UTR 50.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29700151-29700170 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29700158-29700177 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29700447-29700466 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29700462-29700481 Msa0947180:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29700472-29700491 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29702108-29702127 Msa0947180:three_prime_UTR 55.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29700456-29700475 Msa0947180:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29700473-29700492 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29700470-29700489 Msa0947180:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29697754 29702457 29697754 ID=Msa0947180;Name=Msa0947180
chr6_3 mRNA 29697754 29702457 29697754 ID=Msa0947180-mRNA-1;Parent=Msa0947180;Name=Msa0947180-mRNA-1;_AED=0.21;_eAED=0.23;_QI=224|0.5|0.66|1|0.87|0.77|9|1022|160
chr6_3 exon 29697754 29697843 29697754 ID=Msa0947180-mRNA-1:exon:7861;Parent=Msa0947180-mRNA-1
chr6_3 exon 29698348 29698407 29698348 ID=Msa0947180-mRNA-1:exon:7862;Parent=Msa0947180-mRNA-1
chr6_3 exon 29698524 29698602 29698524 ID=Msa0947180-mRNA-1:exon:7863;Parent=Msa0947180-mRNA-1
chr6_3 exon 29698758 29698819 29698758 ID=Msa0947180-mRNA-1:exon:7864;Parent=Msa0947180-mRNA-1
chr6_3 exon 29699475 29699567 29699475 ID=Msa0947180-mRNA-1:exon:7865;Parent=Msa0947180-mRNA-1
chr6_3 exon 29699796 29699831 29699796 ID=Msa0947180-mRNA-1:exon:7866;Parent=Msa0947180-mRNA-1
chr6_3 exon 29700409 29700555 29700409 ID=Msa0947180-mRNA-1:exon:7867;Parent=Msa0947180-mRNA-1
chr6_3 exon 29701037 29701480 29701037 ID=Msa0947180-mRNA-1:exon:7868;Parent=Msa0947180-mRNA-1
chr6_3 exon 29701740 29702457 29701740 ID=Msa0947180-mRNA-1:exon:7869;Parent=Msa0947180-mRNA-1
chr6_3 five_prime_UTR 29697754 29697843 29697754 ID=Msa0947180-mRNA-1:five_prime_utr;Parent=Msa0947180-mRNA-1
chr6_3 five_prime_UTR 29698348 29698407 29698348 ID=Msa0947180-mRNA-1:five_prime_utr;Parent=Msa0947180-mRNA-1
chr6_3 five_prime_UTR 29698524 29698597 29698524 ID=Msa0947180-mRNA-1:five_prime_utr;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29698598 29698602 29698598 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29698758 29698819 29698758 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29699475 29699567 29699475 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29699796 29699831 29699796 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29700409 29700555 29700409 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 CDS 29701037 29701176 29701037 ID=Msa0947180-mRNA-1:cds;Parent=Msa0947180-mRNA-1
chr6_3 three_prime_UTR 29701177 29701480 29701177 ID=Msa0947180-mRNA-1:three_prime_utr;Parent=Msa0947180-mRNA-1
chr6_3 three_prime_UTR 29701740 29702457 29701740 ID=Msa0947180-mRNA-1:three_prime_utr;Parent=Msa0947180-mRNA-1
Gene Sequence

>Msa0947180

ATGGGAGTGAATTTGCAGAGTATTGAAAGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTGTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGTTTCGTCGTCGTCTCCTCCTACCTTTCTACTAGAAGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTGAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTGTTTCAGAATCTGAGTGA
Protein sequence

>Msa0947180

MGVNLQSIESLTKVGGTVICVSAILVLKEELEKCRSKNCVPVLEEFIPLKKKCVSSSSPPTFLLEGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSEINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPIVSESE*