AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0946980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0946980 MtrunA17_Chr5g0410681 97.778 90 2 0 56 145 118 207 6.65e-58 182
Msa0946980 MtrunA17_Chr3g0136661 53.750 80 36 1 66 145 116 194 3.37e-21 87.0
Msa0946980 MtrunA17_Chr6g0452121 87.500 40 5 0 57 96 4 43 6.87e-19 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0946980 AT1G32220.1 61.240 129 46 2 19 145 75 201 3.79e-47 154
Msa0946980 AT5G10730.1 49.367 79 39 1 66 144 117 194 2.44e-19 82.4
Msa0946980 AT5G15910.2 50.649 77 37 1 68 144 63 138 7.04e-18 77.4
Msa0946980 AT5G15910.1 50.649 77 37 1 68 144 104 179 8.95e-18 77.8

Find 89 sgRNAs with CRISPR-Local

Find 740 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29452133 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29452543 None:intergenic
GGAAGTGTTAATTGGATTTC+AGG 0.162392 6_3:-29452535 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29453504 Msa0946980:three_prime_UTR
GTGACTCGATTGTGTGTTTA+AGG 0.185242 6_3:+29453466 Msa0946980:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29453126 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29441630 Msa0946980:CDS
TTCTGAAAGAATAGGGAATT+TGG 0.232650 6_3:-29452235 None:intergenic
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29452556 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29450551 Msa0946980:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29441411 Msa0946980:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29451552 Msa0946980:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29453208 Msa0946980:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29452957 Msa0946980:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29450618 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29451516 Msa0946980:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29452990 Msa0946980:three_prime_UTR
CTTAGAACCTCTCTCCTTTG+TGG 0.386335 6_3:+29452465 Msa0946980:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29441194 Msa0946980:five_prime_UTR
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29452132 None:intergenic
CACTCAGATTCTGAAAGAAT+AGG 0.389610 6_3:-29452243 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29453095 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29452844 Msa0946980:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29441412 Msa0946980:exon
GTGAATTTGCAGAGTATTGA+AGG 0.399588 6_3:+29441591 Msa0946980:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29451624 Msa0946980:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29452183 Msa0946980:CDS
ACTCAGATTCTGAAAGAATA+GGG 0.420667 6_3:-29452242 None:intergenic
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29440622 Msa0946980:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29452913 Msa0946980:three_prime_UTR
TGCTGAGATATGCACTGATT+TGG 0.434101 6_3:+29453490 Msa0946980:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29452442 None:intergenic
TCTTTCAGAATCTGAGTGAA+TGG 0.452610 6_3:+29452248 Msa0946980:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29441383 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29453154 Msa0946980:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29450639 None:intergenic
GAAGTGTTAATTGGATTTCA+GGG 0.471856 6_3:-29452534 None:intergenic
CATATTTCTGCTCCACTCCA+AGG 0.478058 6_3:-29452500 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29441183 Msa0946980:five_prime_UTR
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29441391 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29451534 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29452985 Msa0946980:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29452833 Msa0946980:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29441400 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29441413 Msa0946980:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29453339 Msa0946980:three_prime_UTR
ATTGAAGGTCTGACAAAGGT+TGG 0.527454 6_3:+29441606 Msa0946980:CDS
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29453347 Msa0946980:three_prime_UTR
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29453122 None:intergenic
GAACAAATGAGTAAGATTAA+CGG 0.549035 6_3:+29451582 Msa0946980:CDS
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29441367 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29452446 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29452943 Msa0946980:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29452914 Msa0946980:three_prime_UTR
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29452991 Msa0946980:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29441410 None:intergenic
GAGAGGTTCTAAGCACAAGA+AGG 0.561068 6_3:-29452455 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29441377 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29452910 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29452483 Msa0946980:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29451543 Msa0946980:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29453053 Msa0946980:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29453346 Msa0946980:three_prime_UTR
GAAGGTCTGACAAAGGTTGG+AGG 0.595901 6_3:+29441609 Msa0946980:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29450636 Msa0946980:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29452837 Msa0946980:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29452966 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29452928 Msa0946980:three_prime_UTR
AAGGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29441610 Msa0946980:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29452960 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29440630 Msa0946980:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29451559 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29451599 Msa0946980:CDS
ATATGCTGAATTTCATCATG+AGG 0.622047 6_3:+29452871 Msa0946980:three_prime_UTR
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29440663 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29453252 Msa0946980:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29453340 Msa0946980:three_prime_UTR
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29451560 None:intergenic
ACTGCTGCATCTTATGCAAG+AGG 0.648151 6_3:+29441218 Msa0946980:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29453238 Msa0946980:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29440651 Msa0946980:five_prime_UTR
GAGTATTGAAGGTCTGACAA+AGG 0.665643 6_3:+29441602 Msa0946980:CDS
AATGTCACCACAAAGGAGAG+AGG 0.667419 6_3:-29452472 None:intergenic
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29452488 Msa0946980:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29453137 Msa0946980:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29452479 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29451546 Msa0946980:CDS
AATGAGTAAGATTAACGGCG+AGG 0.694649 6_3:+29451587 Msa0946980:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29453180 Msa0946980:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29443355-29443374 None:intergenic 10.0%
!!! TAATATTTTGATATTGTATA+AGG + chr6_3:29445829-29445848 Msa0946980:intron 10.0%
!!! ATTAAACATAAATATTTTCA+AGG - chr6_3:29446326-29446345 None:intergenic 10.0%
!! TGTGAATATATATAATAATA+AGG + chr6_3:29447404-29447423 Msa0946980:intron 10.0%
!! TTAACATAGATATAAATATT+AGG - chr6_3:29449867-29449886 None:intergenic 10.0%
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29443355-29443374 None:intergenic 10.0%
!! GAAAGAAAAAAAAAATCAAA+TGG + chr6_3:29441109-29441128 Msa0946980:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29441745-29441764 Msa0946980:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29448334-29448353 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29448333-29448352 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29442520-29442539 Msa0946980:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29443075-29443094 None:intergenic 15.0%
!! TTCACATAGATATAAATATT+AGG - chr6_3:29443092-29443111 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG - chr6_3:29447283-29447302 None:intergenic 15.0%
!! AATATTAACTCAATATCTAT+TGG + chr6_3:29443478-29443497 Msa0946980:intron 15.0%
!!! AACTTAATATTTTGAATTGA+AGG - chr6_3:29444910-29444929 None:intergenic 15.0%
!! TATTGTATAAGGAATTAATT+TGG + chr6_3:29445840-29445859 Msa0946980:intron 15.0%
!! TAATTTATTTAATTGGAGAA+AGG + chr6_3:29446346-29446365 Msa0946980:intron 15.0%
!!! TAATTAAATCTGCTTTATTT+AGG - chr6_3:29446493-29446512 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG + chr6_3:29447283-29447302 Msa0946980:intron 15.0%
!! TATACATAGGTATAAATATT+AGG + chr6_3:29447666-29447685 Msa0946980:intron 15.0%
!! ATACATAGGTATAAATATTA+GGG + chr6_3:29447667-29447686 Msa0946980:intron 15.0%
!! TTAATATTATAAACAATGAG+CGG - chr6_3:29442520-29442539 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG + chr6_3:29448333-29448352 Msa0946980:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG + chr6_3:29448334-29448353 Msa0946980:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29448334-29448353 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29448333-29448352 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29442520-29442539 Msa0946980:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29443075-29443094 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29450993-29451012 Msa0946980:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29451395-29451414 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29453524-29453543 Msa0946980:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29440785-29440804 Msa0946980:intron 20.0%
!!! CATAACATATTTTCTTGATA+AGG - chr6_3:29440983-29441002 None:intergenic 20.0%
!! CTTATCAAGAAAATATGTTA+TGG + chr6_3:29440981-29441000 Msa0946980:intron 20.0%
!! AATAGCAATTTATAAATCTG+AGG - chr6_3:29441266-29441285 None:intergenic 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29441713-29441732 Msa0946980:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29441714-29441733 Msa0946980:intron 20.0%
!! TTTGAACATCAACAAAATTA+AGG - chr6_3:29441953-29441972 None:intergenic 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29448335-29448354 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29448074-29448093 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29448073-29448092 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29448040-29448059 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG - chr6_3:29448013-29448032 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29442746-29442765 Msa0946980:intron 20.0%
!! TAAACAAGAGATATATCTTT+AGG - chr6_3:29442811-29442830 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29443232-29443251 Msa0946980:intron 20.0%
!! AAAGTATACATTTGAATCAT+TGG + chr6_3:29443633-29443652 Msa0946980:intron 20.0%
!! GATGTCAAATATAAATGATT+TGG - chr6_3:29443775-29443794 None:intergenic 20.0%
!!! TATGAAATTTGTAAAAGTAC+AGG - chr6_3:29446936-29446955 None:intergenic 20.0%
!!! TGTACTTTTACAAATTTCAT+AGG + chr6_3:29443824-29443843 Msa0946980:intron 20.0%
!!! AATCAATTTTGGTACATATT+AGG + chr6_3:29444026-29444045 Msa0946980:intron 20.0%
!!! CATGTATAGATAAATTGTTT+TGG + chr6_3:29444072-29444091 Msa0946980:intron 20.0%
!! TACAAAATTCATGTATGAAT+TGG - chr6_3:29444243-29444262 None:intergenic 20.0%
!! ATGTATTTGACATATATGTA+GGG - chr6_3:29444304-29444323 None:intergenic 20.0%
!! TATGTATTTGACATATATGT+AGG - chr6_3:29444305-29444324 None:intergenic 20.0%
!! ATATGTCAAATACATATACA+AGG + chr6_3:29444309-29444328 Msa0946980:intron 20.0%
!! TATTGTATAATGCAAATTCT+AGG - chr6_3:29444372-29444391 None:intergenic 20.0%
!! ATTATACAATAATGACAAGT+GGG + chr6_3:29444381-29444400 Msa0946980:intron 20.0%
!! ATTTAACCAATATCCATATA+TGG + chr6_3:29444575-29444594 Msa0946980:intron 20.0%
!!! ATTAGTTTAGATTCTCTTAT+TGG + chr6_3:29444746-29444765 Msa0946980:intron 20.0%
!! TAATAAAAGTGACATGATTA+TGG - chr6_3:29444799-29444818 None:intergenic 20.0%
!! ATAAATTTAGAAGCAATGTT+TGG + chr6_3:29445099-29445118 Msa0946980:intron 20.0%
!! TAAATTTAGAAGCAATGTTT+GGG + chr6_3:29445100-29445119 Msa0946980:intron 20.0%
!!! ATTTGTTTTGAGTAAAATAG+TGG + chr6_3:29445323-29445342 Msa0946980:intron 20.0%
!!! TTTGTTTTGAGTAAAATAGT+GGG + chr6_3:29445324-29445343 Msa0946980:intron 20.0%
!! TATACTGTTAAAAGTTCTTA+TGG + chr6_3:29445447-29445466 Msa0946980:intron 20.0%
!! CAAATGAGTAGAATTAAAAT+TGG + chr6_3:29445622-29445641 Msa0946980:intron 20.0%
!!! TCAGATATGATTTTTGAATT+TGG + chr6_3:29446410-29446429 Msa0946980:intron 20.0%
!! GATGTCAAATATATATGATT+TGG + chr6_3:29446986-29447005 Msa0946980:intron 20.0%
!! AAAGTATACATTTGGATTAT+TGG - chr6_3:29447124-29447143 None:intergenic 20.0%
!!! TCAATATTGATTGGATATTA+GGG - chr6_3:29447342-29447361 None:intergenic 20.0%
!!! ATCAATATTGATTGGATATT+AGG - chr6_3:29447343-29447362 None:intergenic 20.0%
!! TACATAGGTATAAATATTAG+GGG + chr6_3:29447668-29447687 Msa0946980:intron 20.0%
!!! TATCTTATATTGACTTAGTT+CGG - chr6_3:29442746-29442765 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG + chr6_3:29448013-29448032 Msa0946980:intron 20.0%
!! ATTCGTTATTCAGTATATTT+CGG + chr6_3:29448040-29448059 Msa0946980:intron 20.0%
!! TATAAACATTGATCTATACA+AGG + chr6_3:29448073-29448092 Msa0946980:intron 20.0%
!! ATAAACATTGATCTATACAA+GGG + chr6_3:29448074-29448093 Msa0946980:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG + chr6_3:29448335-29448354 Msa0946980:intron 20.0%
!!! AAATTTTGATTTTCTTTCCT+TGG + chr6_3:29448844-29448863 Msa0946980:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29448335-29448354 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29448074-29448093 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29448073-29448092 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29448040-29448059 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29442746-29442765 Msa0946980:intron 20.0%
!! AATATAACTGTAAAATTGCA+TGG - chr6_3:29449552-29449571 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29443232-29443251 Msa0946980:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29450279-29450298 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29450370-29450389 Msa0946980:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29450452-29450471 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29450453-29450472 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29450491-29450510 Msa0946980:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29450732-29450751 None:intergenic 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG + chr6_3:29450742-29450761 Msa0946980:intron 20.0%
!!! TTATGATTTTATGGTAAGAT+TGG + chr6_3:29450751-29450770 Msa0946980:intron 20.0%
!! GAGAATATAGAAGAAAATTA+AGG + chr6_3:29450822-29450841 Msa0946980:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29451096-29451115 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29451500-29451519 Msa0946980:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29451936-29451955 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29451936-29451955 Msa0946980:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29451965-29451984 Msa0946980:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29452005-29452024 Msa0946980:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29452006-29452025 Msa0946980:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29452275-29452294 None:intergenic 20.0%
!! GTTGTACTAACAAAAAAAAA+AGG + chr6_3:29452317-29452336 Msa0946980:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29452546-29452565 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29452763-29452782 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29440666-29440685 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29440926-29440945 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29440998-29441017 Msa0946980:intron 25.0%
!! TACATGTGTTTTATATGATG+AGG + chr6_3:29441077-29441096 Msa0946980:intron 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29441304-29441323 Msa0946980:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29441520-29441539 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29441784-29441803 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29441821-29441840 Msa0946980:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29441902-29441921 Msa0946980:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29448458-29448477 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29448390-29448409 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29448389-29448408 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29442638-29442657 None:intergenic 25.0%
! AATATGACTGTAAAATTGCA+TGG - chr6_3:29447981-29448000 None:intergenic 25.0%
!! AGATATATCTCTTGTTTATG+AGG + chr6_3:29442813-29442832 Msa0946980:intron 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29443199-29443218 Msa0946980:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29443233-29443252 Msa0946980:intron 25.0%
! ATACTTAATGTTCCATCAAA+CGG + chr6_3:29443272-29443291 Msa0946980:intron 25.0%
! ATTTATTCCAAATTACGATC+TGG + chr6_3:29443864-29443883 Msa0946980:intron 25.0%
!!! AATGATGTTGACTTTCATAT+AGG - chr6_3:29443902-29443921 None:intergenic 25.0%
! AATATCCTTGGATATCTTAA+AGG - chr6_3:29443977-29443996 None:intergenic 25.0%
!! TCGAACACTATAATCAATTT+TGG + chr6_3:29444015-29444034 Msa0946980:intron 25.0%
! CATTATACAATAATGACAAG+TGG + chr6_3:29444380-29444399 Msa0946980:intron 25.0%
! ATCATTATGCATGTTATGAT+TGG + chr6_3:29444826-29444845 Msa0946980:intron 25.0%
! TATATATGATATATAAGCCG+TGG + chr6_3:29444857-29444876 Msa0946980:intron 25.0%
!!! ATTTCGATATTAGTCTTGAA+GGG - chr6_3:29444956-29444975 None:intergenic 25.0%
! CTATATGATAGATTAGAGTA+AGG + chr6_3:29445128-29445147 Msa0946980:intron 25.0%
! AAAGTTGTATGAGATACAAT+TGG + chr6_3:29445173-29445192 Msa0946980:intron 25.0%
! TACTCAAAACTCAGTTATTT+AGG - chr6_3:29445211-29445230 None:intergenic 25.0%
! ATTACCTTCAACATTTGAAT+CGG - chr6_3:29445305-29445324 None:intergenic 25.0%
!! ATATCGATTATACATATCGA+CGG + chr6_3:29445721-29445740 Msa0946980:intron 25.0%
! TAACAATTGTTTGTTCAGTA+TGG - chr6_3:29446115-29446134 None:intergenic 25.0%
! TGATGTTTGATTGTTGTATT+AGG + chr6_3:29446142-29446161 Msa0946980:intron 25.0%
!! ATACAAGCGTTGTATTATTA+TGG + chr6_3:29446175-29446194 Msa0946980:intron 25.0%
! TGTTTCCAAAACAAATTACA+GGG - chr6_3:29446461-29446480 None:intergenic 25.0%
! TTGTTTCCAAAACAAATTAC+AGG - chr6_3:29446462-29446481 None:intergenic 25.0%
!! CATGTGTAGATAAATTGTTT+TGG - chr6_3:29446689-29446708 None:intergenic 25.0%
! ATTTGTACCAAAATTGATTG+TGG + chr6_3:29446736-29446755 Msa0946980:intron 25.0%
!!! AATGATGCTGACTTTAATAT+CGG + chr6_3:29446859-29446878 Msa0946980:intron 25.0%
! ATTTATTCCAAATTGCGATT+TGG - chr6_3:29446897-29446916 None:intergenic 25.0%
! TAGAAACAACAACTATTTGA+AGG - chr6_3:29446961-29446980 None:intergenic 25.0%
! TGATACTATTCTAGTAGATA+AGG - chr6_3:29447225-29447244 None:intergenic 25.0%
! CAAACTCAATCAATATTGAT+TGG - chr6_3:29447351-29447370 None:intergenic 25.0%
!! CAATCAATATTGATTGAGTT+TGG + chr6_3:29447349-29447368 Msa0946980:intron 25.0%
! TACATGAACTATCTATTCTA+GGG - chr6_3:29447471-29447490 None:intergenic 25.0%
! TTACATGAACTATCTATTCT+AGG - chr6_3:29447472-29447491 None:intergenic 25.0%
! AGAATAGATAGTTCATGTAA+TGG + chr6_3:29447472-29447491 Msa0946980:intron 25.0%
! TTCATATTAAAGCTTGACTA+TGG - chr6_3:29447560-29447579 None:intergenic 25.0%
!! AGTCAAGCTTTAATATGAAT+TGG + chr6_3:29447561-29447580 Msa0946980:intron 25.0%
!! GTCAAGCTTTAATATGAATT+GGG + chr6_3:29447562-29447581 Msa0946980:intron 25.0%
! GAGATATTAAGTCTATACAT+AGG + chr6_3:29447653-29447672 Msa0946980:intron 25.0%
! ATTAGGGGTAATATTTATAC+TGG + chr6_3:29447683-29447702 Msa0946980:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG + chr6_3:29447947-29447966 Msa0946980:intron 25.0%
! AATATGACTGTAAAATTGCA+TGG + chr6_3:29447981-29448000 Msa0946980:intron 25.0%
! AAAATTACTAAACTCGTTGT+TGG + chr6_3:29448389-29448408 Msa0946980:intron 25.0%
! AAATTACTAAACTCGTTGTT+GGG + chr6_3:29448390-29448409 Msa0946980:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG + chr6_3:29448458-29448477 Msa0946980:intron 25.0%
!! AATTTTCGATTTTCATTCCT+TGG - chr6_3:29448717-29448736 None:intergenic 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29448458-29448477 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29448390-29448409 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29448389-29448408 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29442638-29442657 None:intergenic 25.0%
! TACAGTTATATTTCATCAAG+AGG + chr6_3:29449560-29449579 Msa0946980:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29447947-29447966 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29443199-29443218 Msa0946980:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29443233-29443252 Msa0946980:intron 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr6_3:29450239-29450258 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29450287-29450306 Msa0946980:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29450465-29450484 Msa0946980:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29450466-29450485 Msa0946980:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29450509-29450528 Msa0946980:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29450551-29450570 Msa0946980:intron 25.0%
!! TAAAAATTTTGTGCCAGTTT+TGG + chr6_3:29450605-29450624 Msa0946980:CDS 25.0%
!!! AGATTGGTTGATTTGAAAAT+AGG + chr6_3:29450767-29450786 Msa0946980:intron 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29450860-29450879 Msa0946980:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+TGG + chr6_3:29451288-29451307 Msa0946980:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29451390-29451409 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29451499-29451518 Msa0946980:CDS 25.0%
! GAACAAATGAGTAAGATTAA+CGG + chr6_3:29451582-29451601 Msa0946980:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29451753-29451772 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29451830-29451849 Msa0946980:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29451932-29451951 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29452135-29452154 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29452136-29452155 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29452559-29452578 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29452625-29452644 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29452719-29452738 Msa0946980:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29452720-29452739 Msa0946980:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29453312-29453331 Msa0946980:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29440587-29440606 Msa0946980:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29440622-29440641 Msa0946980:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29440762-29440781 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29440813-29440832 Msa0946980:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29440916-29440935 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29440921-29440940 None:intergenic 30.0%
!! TGTAATTCTTTGAAATGCCA+AGG - chr6_3:29440956-29440975 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29441027-29441046 Msa0946980:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29441142-29441161 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29441158-29441177 Msa0946980:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29441168-29441187 Msa0946980:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29441183-29441202 Msa0946980:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29441194-29441213 Msa0946980:five_prime_UTR 30.0%
CCTGATCATAAATCAATAGA+GGG - chr6_3:29441299-29441318 None:intergenic 30.0%
TCCTGATCATAAATCAATAG+AGG - chr6_3:29441300-29441319 None:intergenic 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29441328-29441347 Msa0946980:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29441332-29441351 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29441334-29441353 Msa0946980:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29441531-29441550 Msa0946980:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29441644-29441663 Msa0946980:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29441658-29441677 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29441785-29441804 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29441783-29441802 Msa0946980:intron 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr6_3:29441972-29441991 Msa0946980:intron 30.0%
! GAATTTCGATTTTCTTTCCT+TGG + chr6_3:29442069-29442088 Msa0946980:intron 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29448154-29448173 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29448149-29448168 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29442644-29442663 Msa0946980:intron 30.0%
TTCAGTATATTTCGGAATCA+AGG - chr6_3:29448048-29448067 None:intergenic 30.0%
!! TATATTGACTTAGTTCGGTA+TGG + chr6_3:29442751-29442770 Msa0946980:intron 30.0%
TACAGTCATATTTCATCAAG+AGG + chr6_3:29442785-29442804 Msa0946980:intron 30.0%
! TATATCTCTTGTTTATGAGG+AGG + chr6_3:29442816-29442835 Msa0946980:intron 30.0%
! ATATCTCTTGTTTATGAGGA+GGG + chr6_3:29442817-29442836 Msa0946980:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29447858-29447877 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29447842-29447861 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29442915-29442934 Msa0946980:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29443040-29443059 Msa0946980:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29443165-29443184 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29443166-29443185 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29443197-29443216 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29443198-29443217 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29443234-29443253 Msa0946980:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29443413-29443432 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29443414-29443433 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29443414-29443433 Msa0946980:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29443415-29443434 Msa0946980:intron 30.0%
AGTATATCCAGATCGTAATT+TGG - chr6_3:29443874-29443893 None:intergenic 30.0%
! TATGGATTGTTTCTTGAACA+TGG - chr6_3:29443952-29443971 None:intergenic 30.0%
TTGGATATCTTAAAGGACTA+TGG - chr6_3:29443970-29443989 None:intergenic 30.0%
!! ATAGTCCTTTAAGATATCCA+AGG + chr6_3:29443969-29443988 Msa0946980:intron 30.0%
ATATCCAAGGATATTCTTGA+AGG + chr6_3:29443982-29444001 Msa0946980:intron 30.0%
AATACCTTCAAGAATATCCT+TGG - chr6_3:29443989-29444008 None:intergenic 30.0%
TTATCTATACATGTGAGACA+TGG - chr6_3:29444065-29444084 None:intergenic 30.0%
AAAGAAATCTTGTGCACATA+AGG - chr6_3:29444155-29444174 None:intergenic 30.0%
! ATAATGCAAATTCTAGGAGA+TGG - chr6_3:29444366-29444385 None:intergenic 30.0%
AAGATGTGATTGATTGTAGA+AGG - chr6_3:29444475-29444494 None:intergenic 30.0%
CACAAACCATATATGGATAT+TGG - chr6_3:29444584-29444603 None:intergenic 30.0%
!! CATTTCGATATTAGTCTTGA+AGG - chr6_3:29444957-29444976 None:intergenic 30.0%
AGACTAATATCGAAATGTGT+AGG + chr6_3:29444960-29444979 Msa0946980:intron 30.0%
CTTTCTATACTAGTAAGTTG+CGG + chr6_3:29445003-29445022 Msa0946980:intron 30.0%
AGAATAACACTTGGGTAAAT+TGG - chr6_3:29445038-29445057 None:intergenic 30.0%
!! TTACCCAAGTGTTATTCTTT+TGG + chr6_3:29445040-29445059 Msa0946980:intron 30.0%
!! TACCCAAGTGTTATTCTTTT+GGG + chr6_3:29445041-29445060 Msa0946980:intron 30.0%
AACCCAAAAGAATAACACTT+GGG - chr6_3:29445046-29445065 None:intergenic 30.0%
AAACCCAAAAGAATAACACT+TGG - chr6_3:29445047-29445066 None:intergenic 30.0%
TTGTATGAGATACAATTGGA+AGG + chr6_3:29445177-29445196 Msa0946980:intron 30.0%
CAAAACTCAGTTATTTAGGT+AGG - chr6_3:29445207-29445226 None:intergenic 30.0%
ACTTAAAGCAAGGTGAAATA+TGG + chr6_3:29445243-29445262 Msa0946980:intron 30.0%
!! TCATTGGAAGATTTTCTAGT+GGG - chr6_3:29445276-29445295 None:intergenic 30.0%
TTTGAATCGGAAAATCTCAT+TGG - chr6_3:29445292-29445311 None:intergenic 30.0%
! TTTTCCGATTCAAATGTTGA+AGG + chr6_3:29445298-29445317 Msa0946980:intron 30.0%
TCAGAAAAGAGTTTCTGAAT+TGG + chr6_3:29445482-29445501 Msa0946980:intron 30.0%
! TATCGATTATACATATCGAC+GGG + chr6_3:29445722-29445741 Msa0946980:intron 30.0%
GATGATATCATTCGTTCAAT+AGG + chr6_3:29446001-29446020 Msa0946980:intron 30.0%
AATACAACGCTTGTATAGTT+AGG - chr6_3:29446171-29446190 None:intergenic 30.0%
!!! TTTAGCCCTGTAATTTGTTT+TGG + chr6_3:29446453-29446472 Msa0946980:intron 30.0%
ATAAAAATCTTGTGCACACA+AGG + chr6_3:29446606-29446625 Msa0946980:intron 30.0%
AACACTTTCAAGAATATCCA+TGG + chr6_3:29446772-29446791 Msa0946980:intron 30.0%
AATATCCATGGATGTCTTAA+AGG + chr6_3:29446784-29446803 Msa0946980:intron 30.0%
! TAAGGATTGTTTCTTGAACA+CGG + chr6_3:29446809-29446828 Msa0946980:intron 30.0%
AGTATATCCAAATCGCAATT+TGG + chr6_3:29446887-29446906 Msa0946980:intron 30.0%
! TTTGGAATAAATGCTATGCT+TGG + chr6_3:29446905-29446924 Msa0946980:intron 30.0%
! GAAGTGTCAAAGTATACATT+TGG - chr6_3:29443625-29443644 None:intergenic 30.0%
! ACACTTCAATTTCTTTTCGA+TGG + chr6_3:29447145-29447164 Msa0946980:intron 30.0%
TAAGGAACTATTTCCTATGT+TGG - chr6_3:29447207-29447226 None:intergenic 30.0%
CATACTATGTAGTATTCTCA+CGG - chr6_3:29447718-29447737 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG - chr6_3:29442915-29442934 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG + chr6_3:29447842-29447861 Msa0946980:intron 30.0%
TAAAAGGATAACCATAACGT+TGG + chr6_3:29447858-29447877 Msa0946980:intron 30.0%
AGATATATCTCCTGTTTATG+AGG - chr6_3:29449588-29449607 None:intergenic 30.0%
TACAGTCATATTTCATCAAG+AGG - chr6_3:29442785-29442804 None:intergenic 30.0%
TTCAGTATATTTCGGAATCA+AGG + chr6_3:29448048-29448067 Msa0946980:intron 30.0%
CAATAAAGATATCGAGACAA+AGG + chr6_3:29448120-29448139 Msa0946980:intron 30.0%
TGTACACATGAGTATTATCA+TGG + chr6_3:29448149-29448168 Msa0946980:intron 30.0%
ACATGAGTATTATCATGGAA+AGG + chr6_3:29448154-29448173 Msa0946980:intron 30.0%
CGAAAAATCGAATAGAAGAA+TGG - chr6_3:29448756-29448775 None:intergenic 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29448154-29448173 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29448149-29448168 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29442644-29442663 Msa0946980:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29449588-29449607 Msa0946980:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29447858-29447877 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29447842-29447861 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29442915-29442934 Msa0946980:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29443040-29443059 Msa0946980:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29443165-29443184 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29443166-29443185 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29443197-29443216 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29443198-29443217 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29443234-29443253 Msa0946980:intron 30.0%
! AGAATAGTTAGTCTGTTTGA+TGG - chr6_3:29450062-29450081 None:intergenic 30.0%
TCAAACAGACTAACTATTCT+AGG + chr6_3:29450062-29450081 Msa0946980:intron 30.0%
CAAACAGACTAACTATTCTA+GGG + chr6_3:29450063-29450082 Msa0946980:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29443413-29443432 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29443414-29443433 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29443414-29443433 Msa0946980:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29443415-29443434 Msa0946980:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr6_3:29450241-29450260 Msa0946980:intron 30.0%
TTAATTATGTTGTCTTCCTC+AGG - chr6_3:29450351-29450370 None:intergenic 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29450396-29450415 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29450395-29450414 Msa0946980:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29450396-29450415 Msa0946980:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29450470-29450489 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29450508-29450527 Msa0946980:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29450510-29450529 Msa0946980:intron 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29450636-29450655 Msa0946980:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29450642-29450661 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29450649-29450668 Msa0946980:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29450679-29450698 None:intergenic 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29451134-29451153 Msa0946980:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29451135-29451154 Msa0946980:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29451191-29451210 Msa0946980:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29451265-29451284 None:intergenic 30.0%
! GAGATTTTGTTAAAATGGTC+AGG + chr6_3:29451293-29451312 Msa0946980:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29451445-29451464 Msa0946980:intron 30.0%
TAAAATAACGCTCAATGAGA+TGG - chr6_3:29451654-29451673 None:intergenic 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29451836-29451855 Msa0946980:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29451940-29451959 Msa0946980:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29452170-29452189 Msa0946980:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29452171-29452190 Msa0946980:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29452172-29452191 Msa0946980:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29452206-29452225 Msa0946980:CDS 30.0%
! TTCTGAAAGAATAGGGAATT+TGG - chr6_3:29452238-29452257 None:intergenic 30.0%
! ACTCAGATTCTGAAAGAATA+GGG - chr6_3:29452245-29452264 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29452417-29452436 Msa0946980:three_prime_UTR 30.0%
! GAAGTGTTAATTGGATTTCA+GGG - chr6_3:29452537-29452556 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29452549-29452568 Msa0946980:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29452784-29452803 Msa0946980:intron 30.0%
GTATGGTTAATTTATCACTC+TGG + chr6_3:29452801-29452820 Msa0946980:intron 30.0%
ATATGCTGAATTTCATCATG+AGG + chr6_3:29452871-29452890 Msa0946980:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29453125-29453144 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29453129-29453148 None:intergenic 30.0%
GCAGTTATCACCAACAATTT+CGG - chr6_3:29440826-29440845 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29440936-29440955 Msa0946980:intron 35.0%
!! TCTTTGAAATGCCAAGGAAA+TGG - chr6_3:29440950-29440969 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29441003-29441022 Msa0946980:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29441026-29441045 Msa0946980:intron 35.0%
!! CCCTCTATTGATTTATGATC+AGG + chr6_3:29441296-29441315 Msa0946980:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29441394-29441413 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29441412-29441431 Msa0946980:exon 35.0%
!! GTGAATTTGCAGAGTATTGA+AGG + chr6_3:29441591-29441610 Msa0946980:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29441698-29441717 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29442008-29442027 Msa0946980:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29442089-29442108 None:intergenic 35.0%
ACATGAATCAGTGATACGAT+TGG + chr6_3:29442107-29442126 Msa0946980:intron 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29442135-29442154 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29442331-29442350 Msa0946980:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29442332-29442351 Msa0946980:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29448189-29448208 None:intergenic 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29447889-29447908 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29447866-29447885 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29447865-29447884 None:intergenic 35.0%
AGAATAGTTAGTCCGTTTGA+TGG - chr6_3:29443287-29443306 None:intergenic 35.0%
!! TCAAACGGACTAACTATTCT+AGG + chr6_3:29443287-29443306 Msa0946980:intron 35.0%
!! CAAACGGACTAACTATTCTA+GGG + chr6_3:29443288-29443307 Msa0946980:intron 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29443408-29443427 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29443406-29443425 Msa0946980:intron 35.0%
AGATACTCTACTAGCAGATA+AGG + chr6_3:29443532-29443551 Msa0946980:intron 35.0%
TAAGGAACTCTTTCCTATGT+TGG + chr6_3:29443550-29443569 Msa0946980:intron 35.0%
TTTCGATAGAAGATCGAAAG+TGG - chr6_3:29443598-29443617 None:intergenic 35.0%
! AATCTCGTCTGAGGTAAAAT+TGG - chr6_3:29443694-29443713 None:intergenic 35.0%
TTTACCTCAGACGAGATTAA+TGG + chr6_3:29443696-29443715 Msa0946980:intron 35.0%
AATATGTGTTTCTTGCGTTG+TGG - chr6_3:29443725-29443744 None:intergenic 35.0%
! TATTAGTTTGGTGGAGTATG+TGG - chr6_3:29446648-29446667 None:intergenic 35.0%
!! GAGCATTGATATTAGTTTGG+TGG - chr6_3:29446639-29446658 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG - chr6_3:29446636-29446655 None:intergenic 35.0%
! TATACCTTTCTAGCATCCTT+TGG + chr6_3:29444268-29444287 Msa0946980:intron 35.0%
TAATCCAAAGGATGCTAGAA+AGG - chr6_3:29444275-29444294 None:intergenic 35.0%
TTTCTTGTAGAAAGCTGACA+TGG - chr6_3:29444518-29444537 None:intergenic 35.0%
TCTCATGAGTCATACTCATT+TGG + chr6_3:29444549-29444568 Msa0946980:intron 35.0%
CCATGTACACAAACCATATA+TGG - chr6_3:29444591-29444610 None:intergenic 35.0%
! CCATATATGGTTTGTGTACA+TGG + chr6_3:29444588-29444607 Msa0946980:intron 35.0%
GGATTCTTTATAAGATCCCA+TGG + chr6_3:29444609-29444628 Msa0946980:intron 35.0%
TTAGCCATTTCTCAAAGTTC+AGG + chr6_3:29444635-29444654 Msa0946980:intron 35.0%
!!! CTTGAAGGGTGTTAAACTTT+TGG - chr6_3:29444942-29444961 None:intergenic 35.0%
! TTCACCTTGCTTTAAGTCAA+CGG - chr6_3:29445240-29445259 None:intergenic 35.0%
! CTCATTGGAAGATTTTCTAG+TGG - chr6_3:29445277-29445296 None:intergenic 35.0%
! CGTATCATGTTTTATGTGCA+TGG + chr6_3:29445648-29445667 Msa0946980:intron 35.0%
TGTCAATACTTCACCAGAAA+CGG - chr6_3:29445702-29445721 None:intergenic 35.0%
GTTTGTTTAGCATGAACAAC+CGG - chr6_3:29446300-29446319 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG + chr6_3:29446636-29446655 Msa0946980:intron 35.0%
!! GAGCATTGATATTAGTTTGG+TGG + chr6_3:29446639-29446658 Msa0946980:intron 35.0%
! TATTAGTTTGGTGGAGTATG+TGG + chr6_3:29446648-29446667 Msa0946980:intron 35.0%
TTATCTACACATGTGAGACA+TGG + chr6_3:29446696-29446715 Msa0946980:intron 35.0%
! TCGAACACCACAATCAATTT+TGG - chr6_3:29446746-29446765 None:intergenic 35.0%
!! TTAGTCCTTTAAGACATCCA+TGG - chr6_3:29446792-29446811 None:intergenic 35.0%
ATGGATGTCTTAAAGGACTA+AGG + chr6_3:29446791-29446810 Msa0946980:intron 35.0%
! GTTTCTTGAACACGGATTAA+AGG + chr6_3:29446817-29446836 Msa0946980:intron 35.0%
AAACCAATTTCACCTCAGAT+GGG - chr6_3:29447071-29447090 None:intergenic 35.0%
TAAACCAATTTCACCTCAGA+TGG - chr6_3:29447072-29447091 None:intergenic 35.0%
GAACTATTTCCTATGTTGGT+AGG - chr6_3:29447203-29447222 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG + chr6_3:29447865-29447884 Msa0946980:intron 35.0%
! TAACCATAACGTTGGTTGAT+GGG + chr6_3:29447866-29447885 Msa0946980:intron 35.0%
TACTTGATGAATCATGCTGA+GGG + chr6_3:29447889-29447908 Msa0946980:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG - chr6_3:29449592-29449611 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG - chr6_3:29449591-29449610 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG - chr6_3:29449526-29449545 None:intergenic 35.0%
GGTGACAATATCTATGTCTT+GGG + chr6_3:29448095-29448114 Msa0946980:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG + chr6_3:29448189-29448208 Msa0946980:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG - chr6_3:29442332-29442351 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG - chr6_3:29442331-29442350 None:intergenic 35.0%
CTGAATTTCGTAATGATCCA+AGG + chr6_3:29448697-29448716 Msa0946980:intron 35.0%
! ATCTTTCGATTTTCCTTCAG+TGG - chr6_3:29441997-29442016 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29442008-29442027 Msa0946980:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29442089-29442108 None:intergenic 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29442135-29442154 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29442331-29442350 Msa0946980:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29442332-29442351 Msa0946980:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29448189-29448208 None:intergenic 35.0%
TTCAGTATATTTCGGAATCG+AGG - chr6_3:29449485-29449504 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG + chr6_3:29449526-29449545 Msa0946980:intron 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29449591-29449610 Msa0946980:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29449592-29449611 Msa0946980:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29447889-29447908 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29447866-29447885 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29447865-29447884 None:intergenic 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29443408-29443427 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29443406-29443425 Msa0946980:intron 35.0%
!! TGGTATATCTGTTTTTCCTG+AGG + chr6_3:29450332-29450351 Msa0946980:intron 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29450380-29450399 Msa0946980:intron 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29450621-29450640 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29450906-29450925 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29450910-29450929 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29451318-29451337 Msa0946980:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29451363-29451382 Msa0946980:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29451364-29451383 Msa0946980:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29451490-29451509 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29451624-29451643 Msa0946980:CDS 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29451710-29451729 Msa0946980:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29451907-29451926 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29451979-29451998 Msa0946980:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29452174-29452193 None:intergenic 35.0%
! CACTCAGATTCTGAAAGAAT+AGG - chr6_3:29452246-29452265 None:intergenic 35.0%
TCTTTCAGAATCTGAGTGAA+TGG + chr6_3:29452248-29452267 Msa0946980:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29452449-29452468 None:intergenic 35.0%
!! GGAAGTGTTAATTGGATTTC+AGG - chr6_3:29452538-29452557 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29452943-29452962 Msa0946980:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29453169-29453188 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29453180-29453199 Msa0946980:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29453238-29453257 Msa0946980:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29453290-29453309 Msa0946980:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29453303-29453322 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29453339-29453358 Msa0946980:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29453340-29453359 Msa0946980:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29453504-29453523 Msa0946980:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29440630-29440649 Msa0946980:five_prime_UTR 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29440866-29440885 None:intergenic 40.0%
TGCCAAGGAAATGGAATTCT+TGG - chr6_3:29440941-29440960 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29441403-29441422 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29441413-29441432 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29441411-29441430 Msa0946980:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29441413-29441432 Msa0946980:exon 40.0%
!! GAGTATTGAAGGTCTGACAA+AGG + chr6_3:29441602-29441621 Msa0946980:CDS 40.0%
ATTGAAGGTCTGACAAAGGT+TGG + chr6_3:29441606-29441625 Msa0946980:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29441630-29441649 Msa0946980:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29441684-29441703 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29441846-29441865 Msa0946980:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29441849-29441868 Msa0946980:intron 40.0%
! CGATTCTAAAAAAGCAGCCT+CGG - chr6_3:29441922-29441941 None:intergenic 40.0%
!! CTTCAGTGCCACTGTAATTT+TGG - chr6_3:29441983-29442002 None:intergenic 40.0%
! CAAAATTACAGTGGCACTGA+AGG + chr6_3:29441981-29442000 Msa0946980:intron 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29448523-29448542 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29442239-29442258 Msa0946980:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29442240-29442259 Msa0946980:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29448473-29448492 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29442461-29442480 Msa0946980:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29448280-29448299 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29448188-29448207 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29442663-29442682 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29447888-29447907 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29443043-29443062 Msa0946980:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29443134-29443153 None:intergenic 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG - chr6_3:29447300-29447319 None:intergenic 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG - chr6_3:29447299-29447318 None:intergenic 40.0%
TGTTAGCATCAAGCACACTA+TGG + chr6_3:29443506-29443525 Msa0946980:intron 40.0%
GAACTCTTTCCTATGTTGGT+AGG + chr6_3:29443554-29443573 Msa0946980:intron 40.0%
GAAGTAAGACCTACCAACAT+AGG - chr6_3:29443566-29443585 None:intergenic 40.0%
GATTCCATTAATCTCGTCTG+AGG - chr6_3:29443703-29443722 None:intergenic 40.0%
GTGCACATAAGGAGATTAGT+GGG - chr6_3:29444144-29444163 None:intergenic 40.0%
TGTGCACATAAGGAGATTAG+TGG - chr6_3:29444145-29444164 None:intergenic 40.0%
GTAGGGTTTCGTTAATCCAA+AGG - chr6_3:29444287-29444306 None:intergenic 40.0%
TTGTAGAAAGCTGACATGGA+TGG - chr6_3:29444514-29444533 None:intergenic 40.0%
! ATGGCCTGAACTTTGAGAAA+TGG - chr6_3:29444642-29444661 None:intergenic 40.0%
ACTTCCTAGAAGGTCGTAAA+TGG - chr6_3:29444661-29444680 None:intergenic 40.0%
! ACGACCTTCTAGGAAGTAAT+AGG + chr6_3:29444664-29444683 Msa0946980:intron 40.0%
! CGACCTTCTAGGAAGTAATA+GGG + chr6_3:29444665-29444684 Msa0946980:intron 40.0%
ATGATATATAAGCCGTGGTG+AGG + chr6_3:29444862-29444881 Msa0946980:intron 40.0%
TATACTAGTAAGTTGCGGTG+CGG + chr6_3:29445008-29445027 Msa0946980:intron 40.0%
! TCACCTTGCTTTAAGTCAAC+GGG - chr6_3:29445239-29445258 None:intergenic 40.0%
! ACAACGCTTATCAGAAGCAT+TGG + chr6_3:29445597-29445616 Msa0946980:intron 40.0%
!! CAACGCTTATCAGAAGCATT+GGG + chr6_3:29445598-29445617 Msa0946980:intron 40.0%
GATGTTTCAGAAACCGTTTC+TGG + chr6_3:29445686-29445705 Msa0946980:intron 40.0%
CTTTGATGCTTCACCAGAAT+CGG - chr6_3:29446082-29446101 None:intergenic 40.0%
GTTTGTTCAGTATGGACAAC+CGG - chr6_3:29446107-29446126 None:intergenic 40.0%
TGAGCTTCAATATCCGAATC+TGG + chr6_3:29446259-29446278 Msa0946980:intron 40.0%
CTATGATGCTTCACCAGATT+CGG - chr6_3:29446275-29446294 None:intergenic 40.0%
TTTCGATGGAAGATCGAAAG+TGG + chr6_3:29447159-29447178 Msa0946980:intron 40.0%
GAAGTGTAACCTACCAACAT+AGG + chr6_3:29447191-29447210 Msa0946980:intron 40.0%
ACTAGAATAGTATCATGCCC+AGG + chr6_3:29447230-29447249 Msa0946980:intron 40.0%
CTAGAATAGTATCATGCCCA+GGG + chr6_3:29447231-29447250 Msa0946980:intron 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG + chr6_3:29447299-29447318 Msa0946980:intron 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG + chr6_3:29447300-29447319 Msa0946980:intron 40.0%
TATCAATGACCCATGAGATG+CGG - chr6_3:29447631-29447650 None:intergenic 40.0%
CTATGTAGTATTCTCACGGT+GGG - chr6_3:29447714-29447733 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+TGG - chr6_3:29443043-29443062 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG + chr6_3:29447888-29447907 Msa0946980:intron 40.0%
ATTTGTCCCTCCTCATAAAC+AGG + chr6_3:29447932-29447951 Msa0946980:intron 40.0%
GGGTGACAATATCTATGTCT+TGG + chr6_3:29448094-29448113 Msa0946980:intron 40.0%
CACTTGACATTCTTGTCACT+TGG + chr6_3:29448188-29448207 Msa0946980:intron 40.0%
CAACGTGACTAGAACCTATA+GGG + chr6_3:29448280-29448299 Msa0946980:intron 40.0%
TTCTTTGTGTGTGACCCTAT+AGG - chr6_3:29442461-29442480 None:intergenic 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG + chr6_3:29448473-29448492 Msa0946980:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG - chr6_3:29442240-29442259 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG - chr6_3:29442239-29442258 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG + chr6_3:29448523-29448542 Msa0946980:intron 40.0%
TCGATTGTTACCTTGAACTG+TGG - chr6_3:29448662-29448681 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29448523-29448542 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29442239-29442258 Msa0946980:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29442240-29442259 Msa0946980:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29448473-29448492 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29442461-29442480 Msa0946980:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29448280-29448299 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29448188-29448207 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29442663-29442682 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29447932-29447951 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29447888-29447907 None:intergenic 40.0%
AAGCACTTGAGTTCACATCT+AGG + chr6_3:29449718-29449737 Msa0946980:intron 40.0%
AGCACTTGAGTTCACATCTA+GGG + chr6_3:29449719-29449738 Msa0946980:intron 40.0%
TTCACATCTAGGGATCATAG+TGG + chr6_3:29449729-29449748 Msa0946980:intron 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29443043-29443062 Msa0946980:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29443134-29443153 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29450318-29450337 None:intergenic 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29450517-29450536 Msa0946980:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29450518-29450537 Msa0946980:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29451138-29451157 Msa0946980:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29451328-29451347 Msa0946980:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29451339-29451358 Msa0946980:intron 40.0%
AATGAGTAAGATTAACGGCG+AGG + chr6_3:29451587-29451606 Msa0946980:CDS 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29451703-29451722 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29452122-29452141 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29452445-29452464 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29452723-29452742 Msa0946980:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29452733-29452752 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29452833-29452852 Msa0946980:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29452893-29452912 Msa0946980:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29452913-29452932 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29452913-29452932 Msa0946980:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29452914-29452933 Msa0946980:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29452957-29452976 Msa0946980:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29452969-29452988 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29452966-29452985 Msa0946980:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29452985-29453004 Msa0946980:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29452990-29453009 Msa0946980:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29452991-29453010 Msa0946980:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29453137-29453156 Msa0946980:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29453252-29453271 Msa0946980:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29453278-29453297 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29453284-29453303 None:intergenic 40.0%
GTGACTCGATTGTGTGTTTA+AGG + chr6_3:29453466-29453485 Msa0946980:three_prime_UTR 40.0%
!! TGCTGAGATATGCACTGATT+TGG + chr6_3:29453490-29453509 Msa0946980:three_prime_UTR 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29441037-29441056 Msa0946980:intron 45.0%
ACTGCTGCATCTTATGCAAG+AGG + chr6_3:29441218-29441237 Msa0946980:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29441370-29441389 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29441380-29441399 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29441386-29441405 None:intergenic 45.0%
AAGGTCTGACAAAGGTTGGA+GGG + chr6_3:29441610-29441629 Msa0946980:CDS 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29442187-29442206 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29442203-29442222 Msa0946980:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29442241-29442260 Msa0946980:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29448279-29448298 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29442476-29442495 Msa0946980:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29442664-29442683 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29442886-29442905 Msa0946980:intron 45.0%
AAGCACTTGAGTCCACATCT+AGG + chr6_3:29442943-29442962 Msa0946980:intron 45.0%
AGCACTTGAGTCCACATCTA+GGG + chr6_3:29442944-29442963 Msa0946980:intron 45.0%
TCCACATCTAGGGATCATAG+TGG + chr6_3:29442954-29442973 Msa0946980:intron 45.0%
ACCACTATGATCCCTAGATG+TGG - chr6_3:29447800-29447819 None:intergenic 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29442961-29442980 Msa0946980:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29443044-29443063 Msa0946980:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29443243-29443262 None:intergenic 45.0%
TAGTGCTAGTGGGAGATTGT+TGG - chr6_3:29447310-29447329 None:intergenic 45.0%
GAGAAATGGCTAAACGCCAT+GGG - chr6_3:29444628-29444647 None:intergenic 45.0%
TGAGAAATGGCTAAACGCCA+TGG - chr6_3:29444629-29444648 None:intergenic 45.0%
GAGCCCTATTACTTCCTAGA+AGG - chr6_3:29444671-29444690 None:intergenic 45.0%
GTAATAGGGCTCATGACGTT+AGG + chr6_3:29444679-29444698 Msa0946980:intron 45.0%
TCATGACGTTAGGATAGTCC+TGG + chr6_3:29444689-29444708 Msa0946980:intron 45.0%
CTTGAGAGAGTCATAGCGTT+AGG + chr6_3:29444769-29444788 Msa0946980:intron 45.0%
AGAGAGTCATAGCGTTAGGA+TGG + chr6_3:29444773-29444792 Msa0946980:intron 45.0%
AGTTTGATCTCACCTCACCA+CGG - chr6_3:29444877-29444896 None:intergenic 45.0%
! AGTATAGAAAGTGCACCTCG+CGG - chr6_3:29444994-29445013 None:intergenic 45.0%
! ACCTTGCTTTAAGTCAACGG+GGG - chr6_3:29445237-29445256 None:intergenic 45.0%
! CACCTTGCTTTAAGTCAACG+GGG - chr6_3:29445238-29445257 None:intergenic 45.0%
CATATCGACGGGAACATGAT+TGG + chr6_3:29445733-29445752 Msa0946980:intron 45.0%
!! TGAGCTTCGAATACCGATTC+TGG + chr6_3:29446066-29446085 Msa0946980:intron 45.0%
! CTGGTGAAGCATCAAAGATC+CGG + chr6_3:29446085-29446104 Msa0946980:intron 45.0%
! CTGGTGAAGCATCATAGATC+CGG + chr6_3:29446278-29446297 Msa0946980:intron 45.0%
TGTGCACACAAGGAGAATAG+TGG + chr6_3:29446616-29446635 Msa0946980:intron 45.0%
GTGCACACAAGGAGAATAGT+GGG + chr6_3:29446617-29446636 Msa0946980:intron 45.0%
GATTCCATTGATCCCATCTG+AGG + chr6_3:29447056-29447075 Msa0946980:intron 45.0%
TTCACCTCAGATGGGATCAA+TGG - chr6_3:29447063-29447082 None:intergenic 45.0%
! GATCCCATCTGAGGTGAAAT+TGG + chr6_3:29447065-29447084 Msa0946980:intron 45.0%
TAGTGCTAGTGGGAGATTGT+TGG + chr6_3:29447310-29447329 Msa0946980:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG - chr6_3:29442961-29442980 None:intergenic 45.0%
ACCACTATGATCCCTAGATG+TGG + chr6_3:29447800-29447819 Msa0946980:intron 45.0%
TCCACATCTAGGGATCATAG+TGG - chr6_3:29442954-29442973 None:intergenic 45.0%
AGCACTTGAGTCCACATCTA+GGG - chr6_3:29442944-29442963 None:intergenic 45.0%
AAGCACTTGAGTCCACATCT+AGG - chr6_3:29442943-29442962 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG - chr6_3:29442886-29442905 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG - chr6_3:29442476-29442495 None:intergenic 45.0%
CCAACGTGACTAGAACCTAT+AGG + chr6_3:29448279-29448298 Msa0946980:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG - chr6_3:29442241-29442260 None:intergenic 45.0%
!! CTTGGTGCTAGCCAATGAAT+TGG - chr6_3:29448537-29448556 None:intergenic 45.0%
!! CATTGGCTAGCACCAAGTTT+TGG + chr6_3:29448540-29448559 Msa0946980:intron 45.0%
AACAGTGCTCCTCCAAAACT+TGG - chr6_3:29442203-29442222 None:intergenic 45.0%
! TTTGTTGCTTGCTGCTTGCT+TGG + chr6_3:29448595-29448614 Msa0946980:intron 45.0%
CAGTTTCCAGTTCCAGCTTT+CGG + chr6_3:29448633-29448652 Msa0946980:intron 45.0%
CTTTCGGATTCCACAGTTCA+AGG + chr6_3:29448649-29448668 Msa0946980:intron 45.0%
GAAGAATGGAGTAGAAGCAG+CGG - chr6_3:29448742-29448761 None:intergenic 45.0%
TTTCGCTCTGATACCACTGA+AGG + chr6_3:29448771-29448790 Msa0946980:intron 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29442187-29442206 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29442203-29442222 Msa0946980:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29442241-29442260 Msa0946980:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29448279-29448298 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29442476-29442495 Msa0946980:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29442664-29442683 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29442886-29442905 Msa0946980:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29442961-29442980 Msa0946980:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29443044-29443063 Msa0946980:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29443243-29443262 None:intergenic 45.0%
CTATTAGGGCTTACTCCAAC+AGG + chr6_3:29443429-29443448 Msa0946980:intron 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29450903-29450922 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29450900-29450919 Msa0946980:intron 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29451165-29451184 Msa0946980:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29451166-29451185 Msa0946980:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29451185-29451204 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29451250-29451269 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29451251-29451270 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29451345-29451364 Msa0946980:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29451346-29451365 Msa0946980:intron 45.0%
CAGTGTTATGCCTAATGTGC+AGG + chr6_3:29451477-29451496 Msa0946980:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29451917-29451936 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29452083-29452102 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29452105-29452124 Msa0946980:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29452183-29452202 Msa0946980:CDS 45.0%
!! GAGAGGTTCTAAGCACAAGA+AGG - chr6_3:29452458-29452477 None:intergenic 45.0%
CTTAGAACCTCTCTCCTTTG+TGG + chr6_3:29452465-29452484 Msa0946980:three_prime_UTR 45.0%
AATGTCACCACAAAGGAGAG+AGG - chr6_3:29452475-29452494 None:intergenic 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29452482-29452501 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29452483-29452502 Msa0946980:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29452488-29452507 Msa0946980:three_prime_UTR 45.0%
! CATATTTCTGCTCCACTCCA+AGG - chr6_3:29452503-29452522 None:intergenic 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29452837-29452856 Msa0946980:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29452844-29452863 Msa0946980:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29453053-29453072 Msa0946980:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29453206-29453225 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29453208-29453227 Msa0946980:three_prime_UTR 45.0%
!!! TTAATATTCTATTTTATTAA+CGG - chr6_3:29445875-29445894 None:intergenic 5.0%
!! GTTTAATTAATTTATTTAAT+TGG + chr6_3:29446339-29446358 Msa0946980:intron 5.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29440651-29440670 Msa0946980:five_prime_UTR 50.0%
!! GCAAGAGGTACTAGCAGCAA+TGG + chr6_3:29441233-29441252 Msa0946980:intron 50.0%
GAAGGTCTGACAAAGGTTGG+AGG + chr6_3:29441609-29441628 Msa0946980:CDS 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29442218-29442237 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29442221-29442240 Msa0946980:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29442833-29442852 Msa0946980:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29447909-29447928 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29447908-29447927 None:intergenic 50.0%
CAGGCCATTTACGACCTTCT+AGG + chr6_3:29444654-29444673 Msa0946980:intron 50.0%
TGACGTTAGGATAGTCCTGG+AGG + chr6_3:29444692-29444711 Msa0946980:intron 50.0%
ATAGTCCTGGAGGTCAAGCT+TGG + chr6_3:29444702-29444721 Msa0946980:intron 50.0%
AGGTCAAGCTTGGAGAAGCA+AGG + chr6_3:29444712-29444731 Msa0946980:intron 50.0%
GGAGAAGCAAGGTCGTTTCT+AGG + chr6_3:29444723-29444742 Msa0946980:intron 50.0%
ACCATGTGTCTCTTGCGTTG+CGG + chr6_3:29447034-29447053 Msa0946980:intron 50.0%
GTTAGCATCAAGCACACCCT+GGG - chr6_3:29447250-29447269 None:intergenic 50.0%
TGTTAGCATCAAGCACACCC+TGG - chr6_3:29447251-29447270 None:intergenic 50.0%
AGACTGATGACCGCATCTCA+TGG + chr6_3:29447618-29447637 Msa0946980:intron 50.0%
GACTGATGACCGCATCTCAT+GGG + chr6_3:29447619-29447638 Msa0946980:intron 50.0%
AGGGACATGAGTGTCCTAGA+TGG + chr6_3:29447908-29447927 Msa0946980:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG + chr6_3:29447909-29447928 Msa0946980:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG - chr6_3:29442833-29442852 None:intergenic 50.0%
!! TGGCTAGCACCAAGTTTTGG+AGG + chr6_3:29448543-29448562 Msa0946980:intron 50.0%
!! TGTTCGTGTGGACTTGCTAG+AGG + chr6_3:29448571-29448590 Msa0946980:intron 50.0%
CGAAAGCTGGAACTGGAAAC+TGG - chr6_3:29448635-29448654 None:intergenic 50.0%
TGGAATCCGAAAGCTGGAAC+TGG - chr6_3:29448642-29448661 None:intergenic 50.0%
GAACTGTGGAATCCGAAAGC+TGG - chr6_3:29448648-29448667 None:intergenic 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29442218-29442237 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29442221-29442240 Msa0946980:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29442833-29442852 Msa0946980:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29447909-29447928 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29447908-29447927 None:intergenic 50.0%
GTTTGGATTCACGTGCCTGT+TGG - chr6_3:29450222-29450241 None:intergenic 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29450303-29450322 Msa0946980:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29450312-29450331 Msa0946980:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29451150-29451169 Msa0946980:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29451249-29451268 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29451516-29451535 Msa0946980:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29451543-29451562 Msa0946980:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29451599-29451618 Msa0946980:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29452928-29452947 Msa0946980:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29452963-29452982 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29453098-29453117 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29453154-29453173 Msa0946980:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29453195-29453214 Msa0946980:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29453199-29453218 Msa0946980:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29453346-29453365 Msa0946980:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29453347-29453366 Msa0946980:three_prime_UTR 50.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29448559-29448578 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29442215-29442234 None:intergenic 55.0%
CTTCTCCAAGCTTGACCTCC+AGG - chr6_3:29444710-29444729 None:intergenic 55.0%
! ATAGAAAGTGCACCTCGCGG+AGG - chr6_3:29444991-29445010 None:intergenic 55.0%
!! GCCCCCGTTGACTTAAAGCA+AGG + chr6_3:29445233-29445252 Msa0946980:intron 55.0%
TCCGCAACGCAAGAGACACA+TGG - chr6_3:29447038-29447057 None:intergenic 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG + chr6_3:29448559-29448578 Msa0946980:intron 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29448559-29448578 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29442215-29442234 None:intergenic 55.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29451241-29451260 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29451248-29451267 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29451537-29451556 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29451552-29451571 Msa0946980:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29451562-29451581 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29453198-29453217 Msa0946980:three_prime_UTR 55.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29451546-29451565 Msa0946980:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29451563-29451582 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29451560-29451579 Msa0946980:CDS 60.0%
GTGTAGGTTTCGCCTCCGCG+AGG + chr6_3:29444976-29444995 Msa0946980:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29440583 29453547 29440583 ID=Msa0946980;Name=Msa0946980
chr6_3 mRNA 29440583 29453547 29440583 ID=Msa0946980-mRNA-1;Parent=Msa0946980;Name=Msa0946980-mRNA-1;_AED=0.17;_eAED=0.17;_QI=224|0.71|0.87|1|0.42|0.62|8|1022|151
chr6_3 exon 29440583 29440672 29440583 ID=Msa0946980-mRNA-1:exon:7775;Parent=Msa0946980-mRNA-1
chr6_3 exon 29441180 29441239 29441180 ID=Msa0946980-mRNA-1:exon:7776;Parent=Msa0946980-mRNA-1
chr6_3 exon 29441356 29441434 29441356 ID=Msa0946980-mRNA-1:exon:7777;Parent=Msa0946980-mRNA-1
chr6_3 exon 29441581 29441651 29441581 ID=Msa0946980-mRNA-1:exon:7778;Parent=Msa0946980-mRNA-1
chr6_3 exon 29450565 29450657 29450565 ID=Msa0946980-mRNA-1:exon:7779;Parent=Msa0946980-mRNA-1
chr6_3 exon 29451499 29451645 29451499 ID=Msa0946980-mRNA-1:exon:7780;Parent=Msa0946980-mRNA-1
chr6_3 exon 29452127 29452570 29452127 ID=Msa0946980-mRNA-1:exon:7781;Parent=Msa0946980-mRNA-1
chr6_3 exon 29452830 29453547 29452830 ID=Msa0946980-mRNA-1:exon:7782;Parent=Msa0946980-mRNA-1
chr6_3 five_prime_UTR 29440583 29440672 29440583 ID=Msa0946980-mRNA-1:five_prime_utr;Parent=Msa0946980-mRNA-1
chr6_3 five_prime_UTR 29441180 29441239 29441180 ID=Msa0946980-mRNA-1:five_prime_utr;Parent=Msa0946980-mRNA-1
chr6_3 five_prime_UTR 29441356 29441429 29441356 ID=Msa0946980-mRNA-1:five_prime_utr;Parent=Msa0946980-mRNA-1
chr6_3 CDS 29441430 29441434 29441430 ID=Msa0946980-mRNA-1:cds;Parent=Msa0946980-mRNA-1
chr6_3 CDS 29441581 29441651 29441581 ID=Msa0946980-mRNA-1:cds;Parent=Msa0946980-mRNA-1
chr6_3 CDS 29450565 29450657 29450565 ID=Msa0946980-mRNA-1:cds;Parent=Msa0946980-mRNA-1
chr6_3 CDS 29451499 29451645 29451499 ID=Msa0946980-mRNA-1:cds;Parent=Msa0946980-mRNA-1
chr6_3 CDS 29452127 29452266 29452127 ID=Msa0946980-mRNA-1:cds;Parent=Msa0946980-mRNA-1
chr6_3 three_prime_UTR 29452267 29452570 29452267 ID=Msa0946980-mRNA-1:three_prime_utr;Parent=Msa0946980-mRNA-1
chr6_3 three_prime_UTR 29452830 29453547 29452830 ID=Msa0946980-mRNA-1:three_prime_utr;Parent=Msa0946980-mRNA-1
Gene Sequence

>Msa0946980

ATGGGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTTTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTCTTTCAGAATCTGAGTGA
Protein sequence

>Msa0946980

MGVERVNLQSIEGLTKVGGTVICVSAILVLKEELEKCRSKNFVPVLEEFIPLKKKCGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPILSESE*